F334533

General Info

Members Datasets Scaffolds Average Seq Length
222 154 444 260

Family's Representative Sequence

Representative Sequence 3300025910|Ga0207684_10032577|Ga0207684_100325774
Length 278
Sequence MRIVSAAPAQEDSSKLTTIAVTGAAGRMGSRIIALAREAAVFQVVAAIERPDHPNLARDAGEVAGVGAIGVPLTSDLRPTPQVLIDFTAPPSTRHWLKTCRDRAIAMVIGTTGLHKVDHAAIDVAAESIPILQAPNMSLGVNLLFKIAGEVAKKLGDDYDIEIVEAHHRFKKDAPSGTAAGLADAILKATGKKPDSLVYDRHGDDVQRKRGEIGMHALRIGDEVGRHTAHFATLGERLELTHVATNRDTFVHGALRAAQWIAQQKPGRYSVADMLGLT

Samples

Sample ID Description Type Environment
1 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
33 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
34 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
35 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
36 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
37 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
38 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
39 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
46 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
47 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
50 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
51 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
52 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
53 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
58 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
85 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
89 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
90 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
91 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
92 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
93 3300033529 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
94 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
95 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
96 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
97 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
98 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
99 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
100 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
101 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
102 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
103 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
104 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
105 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
106 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
107 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
108 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
109 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
110 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
111 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
112 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
113 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
114 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
115 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
116 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
117 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
118 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
119 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
120 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
121 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
122 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
123 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
124 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
125 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
126 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
127 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
128 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
129 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
130 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
131 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
132 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
140 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
141 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
142 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
143 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
144 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
145 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
146 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
147 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
148 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
149 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
150 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
151 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
152 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
153 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
154 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.55
Metatranscriptomes 0.45
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.45
Nodule 0
Rhizoplane 1.8
Rhizosphere 96.85
Stem 0
Stem Tuber 0
Unclassified 9.01

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207684_10032577 3300025910 Bacteria 4431
2 Ga0065712_10000347 3300005290 Bacteria 16116
3 Ga0065715_10000293 3300005293 Bacteria 17439
4 Ga0065707_10100250 3300005295 Unclassified 2934
5 Ga0070658_10087664 3300005327 Bacteria 2562
6 Ga0070658_10227795 3300005327 Bacteria 1578
7 Ga0070690_100324662 3300005330 Bacteria 1110
8 Ga0070666_10247891 3300005335 Bacteria 1260
9 Ga0070680_100462721 3300005336 Bacteria 1084
10 Ga0070660_100092225 3300005339 Bacteria 2390
11 Ga0070689_100249962 3300005340 Bacteria 1463
12 Ga0070661_100033939 3300005344 Bacteria 3699
13 Ga0070661_100314741 3300005344 Unclassified 1221
14 Ga0070675_100027503 3300005354 Bacteria 4570
15 Ga0070675_100064668 3300005354 Bacteria 3024
16 Ga0070671_100148238 3300005355 Bacteria 1981
17 Ga0070671_100285204 3300005355 Bacteria 1405
18 Ga0070688_100197974 3300005365 Bacteria 1404
19 Ga0070659_100101201 3300005366 Bacteria 2320
20 Ga0070667_100293393 3300005367 Bacteria 1463
21 Ga0070714_100083389 3300005435 Bacteria 2787
22 Ga0070662_100019322 3300005457 Bacteria 4624
23 Ga0070698_100170896 3300005471 Bacteria 2115
24 Ga0070679_100088758 3300005530 Bacteria 3078
25 Ga0070697_100058266 3300005536 Bacteria 3143
26 Ga0070672_100025097 3300005543 Bacteria 4416
27 Ga0070672_100425211 3300005543 Bacteria 1141
28 Ga0070665_100063439 3300005548 Bacteria 3705
29 Ga0068855_100324248 3300005563 Bacteria 1702
30 Ga0070664_100280206 3300005564 Bacteria 1503
31 Ga0070664_100344126 3300005564 Bacteria 1355
32 Ga0068857_100046616 3300005577 Bacteria 3846
33 Ga0070702_100634170 3300005615 Unclassified 806
34 Ga0068859_101051576 3300005617 Bacteria 895
35 Ga0068864_100128929 3300005618 Bacteria 2270
36 Ga0068863_100102438 3300005841 Unclassified 2722
37 Ga0068863_100283790 3300005841 Bacteria 1605
38 Ga0068863_100546756 3300005841 Bacteria 1143
39 Ga0068860_100183616 3300005843 Bacteria 2022
40 Ga0068860_100192251 3300005843 Bacteria 1975
41 Ga0070712_100419111 3300006175 Bacteria 1109
42 Ga0075367_10003765 3300006178 Bacteria 7304
43 Ga0075428_100004966 3300006844 Bacteria 14771
44 Ga0075428_100389048 3300006844 Bacteria 1495
45 Ga0075430_100167893 3300006846 Bacteria 1825
46 Ga0075433_10067774 3300006852 Bacteria 3132
47 Ga0075433_10157628 3300006852 Bacteria 2020
48 Ga0075434_100013518 3300006871 Bacteria 7774
49 Ga0075434_100088279 3300006871 Bacteria 3102
50 Ga0068865_100386172 3300006881 Bacteria 1143
51 Ga0068865_100471079 3300006881 Bacteria 1042
52 Ga0097620_101051629 3300006931 Bacteria 895
53 Ga0075435_100027022 3300007076 Bacteria 4485
54 Ga0075435_100104683 3300007076 Bacteria 2348
55 Ga0105240_10036635 3300009093 Bacteria 6308
56 Ga0105240_10729328 3300009093 Bacteria 1079
57 Ga0111539_10045973 3300009094 Bacteria 5224
58 Ga0111539_10105237 3300009094 Bacteria 3310
59 Ga0105245_10039961 3300009098 Bacteria 4177
60 Ga0114129_10653785 3300009147 Bacteria 1356
61 Ga0105241_10157633 3300009174 Bacteria 1863
62 Ga0105248_10501282 3300009177 Bacteria 1369
63 Ga0105237_10392077 3300009545 Unclassified 1393
64 Ga0105239_10142154 3300010375 Bacteria 2675
65 Ga0105239_10314997 3300010375 Bacteria 1764
66 Ga0105239_10722148 3300010375 Unclassified 1140
67 Ga0105246_10116175 3300011119 Bacteria 1975
68 Ga0157373_10085766 3300013100 Bacteria 2219
69 Ga0157373_10186647 3300013100 Bacteria 1460
70 Ga0157371_10061980 3300013102 Bacteria 2652
71 Ga0157370_10027532 3300013104 Bacteria 5604
72 Ga0157370_10124181 3300013104 Bacteria 2410
73 Ga0157370_10355428 3300013104 Bacteria 1350
74 Ga0157369_10382632 3300013105 Bacteria 1460
75 Ga0157369_10553403 3300013105 Bacteria 1189
76 Ga0157378_10403168 3300013297 Bacteria 1348
77 Ga0157378_10646948 3300013297 Bacteria 1072
78 Ga0163162_10138494 3300013306 Bacteria 2545
79 Ga0157372_10163539 3300013307 Unclassified 2573
80 Ga0213876_10033218 3300021384 Bacteria 2720
81 Ga0207697_10070335 3300025315 Bacteria 1466
82 Ga0207645_10003056 3300025907 Bacteria 12856
83 Ga0207707_10101112 3300025912 Bacteria 2519
84 Ga0207695_10001078 3300025913 Bacteria 47698
85 Ga0207693_10373485 3300025915 Bacteria 1115
86 Ga0207660_10227015 3300025917 Bacteria 1467
87 Ga0207657_10107615 3300025919 Bacteria 2306
88 Ga0207649_10155738 3300025920 Bacteria 1578
89 Ga0207681_10016378 3300025923 Bacteria 4638
90 Ga0207650_10083759 3300025925 Bacteria 2423
91 Ga0207650_10157623 3300025925 Bacteria 1796
92 Ga0207659_10092835 3300025926 Bacteria 2258
93 Ga0207659_10158540 3300025926 Bacteria 1774
94 Ga0207659_10169281 3300025926 Bacteria 1722
95 Ga0207659_10572779 3300025926 Unclassified 961
96 Ga0207664_10158450 3300025929 Bacteria 1929
97 Ga0207644_10120750 3300025931 Bacteria 1995
98 Ga0207644_10230298 3300025931 Bacteria 1472
99 Ga0207690_10120596 3300025932 Bacteria 1904
100 Ga0207690_10349581 3300025932 Bacteria 1169
101 Ga0207691_10003068 3300025940 Bacteria 16297
102 Ga0207691_10006190 3300025940 Bacteria 11560
103 Ga0207689_10226675 3300025942 Bacteria 1544
104 Ga0207661_10417058 3300025944 Bacteria 1219
105 Ga0207667_10303641 3300025949 Bacteria 1631
106 Ga0207667_10340945 3300025949 Bacteria 1529
107 Ga0207651_10578646 3300025960 Bacteria 979
108 Ga0207658_10067596 3300025986 Bacteria 2693
109 Ga0207658_10196215 3300025986 Bacteria 1682
110 Ga0207677_10297541 3300026023 Bacteria 1332
111 Ga0207702_10422701 3300026078 Bacteria 1289
112 Ga0207641_10530403 3300026088 Bacteria 1146
113 Ga0207676_10164176 3300026095 Bacteria 1928
114 Ga0207674_10136482 3300026116 Bacteria 2415
115 Ga0207674_10163846 3300026116 Bacteria 2178
116 Ga0207683_10297451 3300026121 Bacteria 1476
117 Ga0207428_10393546 3300027907 Bacteria 1015
118 Ga0268266_10067753 3300028379 Bacteria 3090
119 Ga0268265_10337001 3300028380 Bacteria 1372
120 Ga0268265_10453994 3300028380 Bacteria 1198
121 Ga0268264_10150500 3300028381 Bacteria 2086
122 Ga0316575_10003395 3300031665 Bacteria 5487
123 Ga0307405_10442186 3300031731 Unclassified 1029
124 Ga0307410_10558036 3300031852 Bacteria 950
125 Ga0307409_100064009 3300031995 Bacteria 2887
126 Ga0307411_10461517 3300032005 Unclassified 1065
127 Ga0316587_1000225 3300033529 Bacteria 5052
128 Ga0373926_0124414 3300035083 Unclassified 974
129 Ga0373952_0126862 3300035092 Bacteria 697
130 Ga0373946_0194916 3300035171 Bacteria 968
131 Ga0373955_0033671 3300035172 Bacteria 2700
132 Ga0373955_0146299 3300035172 Bacteria 1388
133 Ga0373931_0031147 3300035691 Bacteria 2751
134 Ga0373935_0051545 3300035692 Bacteria 2614
135 Ga0373947_0057878 3300035725 Unclassified 2347
136 Ga0395905_0970101 3300037471 Bacteria 753
137 Ga0395901_0069349 3300038443 Bacteria 3672
138 Ga0395901_0564326 3300038443 Bacteria 1152
139 Ga0436365_0713573 3300039437 Bacteria 2941
140 Ga0439441_007391 3300042001 Unclassified 1769
141 Ga0451577_0000050 3300042876 Bacteria 301123
142 Ga0453683_0001600 3300044673 Bacteria 19122
143 Ga0453683_0063364 3300044673 Unclassified 2311
144 Ga0453683_0225592 3300044673 Bacteria 1192
145 Ga0453684_0000061 3300044712 Bacteria 489946
146 Ga0453684_0001950 3300044712 Bacteria 53217
147 Ga0453684_0005023 3300044712 Bacteria 26860
148 Ga0453684_0048059 3300044712 Bacteria 5649
149 Ga0453684_0067575 3300044712 Bacteria 4544
150 Ga0453684_0149741 3300044712 Bacteria 2775
151 Ga0451576_0000999 3300045051 Bacteria 52316
152 Ga0451576_0006321 3300045051 Bacteria 14561
153 Ga0451576_0016253 3300045051 Bacteria 8219
154 Ga0451576_0164027 3300045051 Unclassified 2319
155 Ga0451576_0214367 3300045051 Bacteria 2011
156 Ga0451576_0623264 3300045051 Bacteria 1133
157 Ga0495653_0240585 3300046463 Bacteria 1207
158 Ga0495639_0088392 3300046475 Bacteria 1451
159 Ga0495639_0238791 3300046475 Bacteria 896
160 Ga0495608_0221097 3300046511 Bacteria 1188
161 Ga0495608_0483813 3300046511 Bacteria 751
162 Ga0495618_0043905 3300046514 Bacteria 2820
163 Ga0495628_0016404 3300046516 Bacteria 6181
164 Ga0495628_0051046 3300046516 Bacteria 3271
165 Ga0495630_0006807 3300046517 Bacteria 8148
166 Ga0495630_0021603 3300046517 Bacteria 4752
167 Ga0495666_0072333 3300046526 Bacteria 1638
168 Ga0495666_0179153 3300046526 Bacteria 979
169 Ga0495652_0363437 3300046529 Unclassified 1034
170 Ga0495640_0263974 3300046533 Bacteria 1075
171 Ga0495667_0346557 3300046559 Bacteria 939
172 Ga0495635_0317689 3300046663 Bacteria 1043
173 Ga0495599_0054889 3300046678 Bacteria 2496
174 Ga0495613_0100565 3300046689 Bacteria 2088
175 Ga0495613_0545474 3300046689 Bacteria 776
176 Ga0495624_0031971 3300046690 Bacteria 3415
177 Ga0495581_0097227 3300047315 Bacteria 1710
178 Ga0495674_0059105 3300047319 Unclassified 3349
179 Ga0495680_0074407 3300047322 Bacteria 2580
180 Ga0495684_0000974 3300047471 Bacteria 23309
181 Ga0495684_0266063 3300047471 Unclassified 1242
182 Ga0495684_0293492 3300047471 Bacteria 1169
183 Ga0495614_0122738 3300048089 Bacteria 1146
184 Ga0496104_0547694 3300048907 Bacteria 1068
185 Ga0496109_0381066 3300048912 Bacteria 1332
186 Ga0496110_0526761 3300048913 Bacteria 1075
187 Ga0496112_0048966 3300048915 Bacteria 4141
188 Ga0501032_0171901 3300049569 Bacteria 1420
189 Ga0501034_0001195 3300049571 Bacteria 35704
190 Ga0501034_0182292 3300049571 Bacteria 2064
191 Ga0501039_0233949 3300049575 Bacteria 1444
192 Ga0501040_0063823 3300049576 Bacteria 2535
193 Ga0501041_0107016 3300049577 Bacteria 1733
194 Ga0501041_0345617 3300049577 Bacteria 940
195 Ga0501046_0087568 3300049580 Bacteria 2400
196 Ga0501047_0041821 3300049581 Bacteria 4428
197 Ga0501070_0031740 3300049586 Bacteria 4426
198 Ga0501071_0408640 3300049587 Bacteria 1037
199 Ga0501076_0066711 3300049592 Bacteria 2872
200 Ga0501079_0417832 3300049741 Bacteria 1052
201 Ga0501080_0153919 3300049742 Bacteria 2124
202 Ga0501083_0150730 3300049744 Bacteria 1522
203 Ga0501044_0000926 3300049823 Bacteria 35271
204 Ga0501044_0005270 3300049823 Bacteria 14381
205 nmdc:mga05p37_53985_c1 3300050507 Bacteria 4944
206 nmdc:mga05p37_604045_c1 3300050507 Bacteria 1238
207 nmdc:mga0qj67_145965_c1 3300050509 Unclassified 1918
208 nmdc:mga0qj67_160970_c1 3300050509 Bacteria 1822
209 nmdc:mga06r32_146616_c1 3300050510 Bacteria 2337
210 nmdc:mga06r32_294005_c1 3300050510 Unclassified 1611
211 nmdc:mga06r32_415708_c1 3300050510 Bacteria 1326
212 nmdc:mga08y16_31435_c1 3300050511 Bacteria 5583
213 nmdc:mga08y16_333570_c1 3300050511 Bacteria 1560
214 nmdc:mga08y16_433782_c1 3300050511 Bacteria 1342
215 nmdc:mga08y16_84166_c1 3300050511 Bacteria 3315
216 nmdc:mga0n895_7104_c1 3300050512 Bacteria 9573
217 nmdc:mga0n895_805914_c1 3300050512 Bacteria 929
218 nmdc:mga0rr50_132669_c1 3300050513 Bacteria 1996
219 nmdc:mga08x19_315780_c1 3300050514 Bacteria 1087
220 nmdc:mga0a205_14707_c1 3300050515 Bacteria 7301
221 nmdc:mga0a205_76881_c1 3300050515 Bacteria 3226
222 Ga0495612_0043884 3300053078 Bacteria 1828
223 Ga0207684_10032577
224 Ga0065712_10000347
225 Ga0065715_10000293
226 Ga0065707_10100250
227 Ga0070658_10087664
228 Ga0070658_10227795
229 Ga0070690_100324662
230 Ga0070666_10247891
231 Ga0070680_100462721
232 Ga0070660_100092225
233 Ga0070689_100249962
234 Ga0070661_100033939
235 Ga0070661_100314741
236 Ga0070675_100027503
237 Ga0070675_100064668
238 Ga0070671_100148238
239 Ga0070671_100285204
240 Ga0070688_100197974
241 Ga0070659_100101201
242 Ga0070667_100293393
243 Ga0070714_100083389
244 Ga0070662_100019322
245 Ga0070698_100170896
246 Ga0070679_100088758
247 Ga0070697_100058266
248 Ga0070672_100025097
249 Ga0070672_100425211
250 Ga0070665_100063439
251 Ga0068855_100324248
252 Ga0070664_100280206
253 Ga0070664_100344126
254 Ga0068857_100046616
255 Ga0070702_100634170
256 Ga0068859_101051576
257 Ga0068864_100128929
258 Ga0068863_100102438
259 Ga0068863_100283790
260 Ga0068863_100546756
261 Ga0068860_100183616
262 Ga0068860_100192251
263 Ga0070712_100419111
264 Ga0075367_10003765
265 Ga0075428_100004966
266 Ga0075428_100389048
267 Ga0075430_100167893
268 Ga0075433_10067774
269 Ga0075433_10157628
270 Ga0075434_100013518
271 Ga0075434_100088279
272 Ga0068865_100386172
273 Ga0068865_100471079
274 Ga0097620_101051629
275 Ga0075435_100027022
276 Ga0075435_100104683
277 Ga0105240_10036635
278 Ga0105240_10729328
279 Ga0111539_10045973
280 Ga0111539_10105237
281 Ga0105245_10039961
282 Ga0114129_10653785
283 Ga0105241_10157633
284 Ga0105248_10501282
285 Ga0105237_10392077
286 Ga0105239_10142154
287 Ga0105239_10314997
288 Ga0105239_10722148
289 Ga0105246_10116175
290 Ga0157373_10085766
291 Ga0157373_10186647
292 Ga0157371_10061980
293 Ga0157370_10027532
294 Ga0157370_10124181
295 Ga0157370_10355428
296 Ga0157369_10382632
297 Ga0157369_10553403
298 Ga0157378_10403168
299 Ga0157378_10646948
300 Ga0163162_10138494
301 Ga0157372_10163539
302 Ga0213876_10033218
303 Ga0207697_10070335
304 Ga0207645_10003056
305 Ga0207707_10101112
306 Ga0207695_10001078
307 Ga0207693_10373485
308 Ga0207660_10227015
309 Ga0207657_10107615
310 Ga0207649_10155738
311 Ga0207681_10016378
312 Ga0207650_10083759
313 Ga0207650_10157623
314 Ga0207659_10092835
315 Ga0207659_10158540
316 Ga0207659_10169281
317 Ga0207659_10572779
318 Ga0207664_10158450
319 Ga0207644_10120750
320 Ga0207644_10230298
321 Ga0207690_10120596
322 Ga0207690_10349581
323 Ga0207691_10003068
324 Ga0207691_10006190
325 Ga0207689_10226675
326 Ga0207661_10417058
327 Ga0207667_10303641
328 Ga0207667_10340945
329 Ga0207651_10578646
330 Ga0207658_10067596
331 Ga0207658_10196215
332 Ga0207677_10297541
333 Ga0207702_10422701
334 Ga0207641_10530403
335 Ga0207676_10164176
336 Ga0207674_10136482
337 Ga0207674_10163846
338 Ga0207683_10297451
339 Ga0207428_10393546
340 Ga0268266_10067753
341 Ga0268265_10337001
342 Ga0268265_10453994
343 Ga0268264_10150500
344 Ga0316575_10003395
345 Ga0307405_10442186
346 Ga0307410_10558036
347 Ga0307409_100064009
348 Ga0307411_10461517
349 Ga0316587_1000225
350 Ga0373926_0124414
351 Ga0373952_0126862
352 Ga0373946_0194916
353 Ga0373955_0033671
354 Ga0373955_0146299
355 Ga0373931_0031147
356 Ga0373935_0051545
357 Ga0373947_0057878
358 Ga0395905_0970101
359 Ga0395901_0069349
360 Ga0395901_0564326
361 Ga0436365_0713573
362 Ga0439441_007391
363 Ga0451577_0000050
364 Ga0453683_0001600
365 Ga0453683_0063364
366 Ga0453683_0225592
367 Ga0453684_0000061
368 Ga0453684_0001950
369 Ga0453684_0005023
370 Ga0453684_0048059
371 Ga0453684_0067575
372 Ga0453684_0149741
373 Ga0451576_0000999
374 Ga0451576_0006321
375 Ga0451576_0016253
376 Ga0451576_0164027
377 Ga0451576_0214367
378 Ga0451576_0623264
379 Ga0495653_0240585
380 Ga0495639_0088392
381 Ga0495639_0238791
382 Ga0495608_0221097
383 Ga0495608_0483813
384 Ga0495618_0043905
385 Ga0495628_0016404
386 Ga0495628_0051046
387 Ga0495630_0006807
388 Ga0495630_0021603
389 Ga0495666_0072333
390 Ga0495666_0179153
391 Ga0495652_0363437
392 Ga0495640_0263974
393 Ga0495667_0346557
394 Ga0495635_0317689
395 Ga0495599_0054889
396 Ga0495613_0100565
397 Ga0495613_0545474
398 Ga0495624_0031971
399 Ga0495581_0097227
400 Ga0495674_0059105
401 Ga0495680_0074407
402 Ga0495684_0000974
403 Ga0495684_0266063
404 Ga0495684_0293492
405 Ga0495614_0122738
406 Ga0496104_0547694
407 Ga0496109_0381066
408 Ga0496110_0526761
409 Ga0496112_0048966
410 Ga0501032_0171901
411 Ga0501034_0001195
412 Ga0501034_0182292
413 Ga0501039_0233949
414 Ga0501040_0063823
415 Ga0501041_0107016
416 Ga0501041_0345617
417 Ga0501046_0087568
418 Ga0501047_0041821
419 Ga0501070_0031740
420 Ga0501071_0408640
421 Ga0501076_0066711
422 Ga0501079_0417832
423 Ga0501080_0153919
424 Ga0501083_0150730
425 Ga0501044_0000926
426 Ga0501044_0005270
427 nmdc:mga05p37_53985_c1
428 nmdc:mga05p37_604045_c1
429 nmdc:mga0qj67_145965_c1
430 nmdc:mga0qj67_160970_c1
431 nmdc:mga06r32_146616_c1
432 nmdc:mga06r32_294005_c1
433 nmdc:mga06r32_415708_c1
434 nmdc:mga08y16_31435_c1
435 nmdc:mga08y16_333570_c1
436 nmdc:mga08y16_433782_c1
437 nmdc:mga08y16_84166_c1
438 nmdc:mga0n895_7104_c1
439 nmdc:mga0n895_805914_c1
440 nmdc:mga0rr50_132669_c1
441 nmdc:mga08x19_315780_c1
442 nmdc:mga0a205_14707_c1
443 nmdc:mga0a205_76881_c1
444 Ga0495612_0043884

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01113

DapB_N

Dihydrodipicolinate reductase, N-terminus

17

137

0.98

PF05173

DapB_C

Dihydrodipicolinate reductase, C-terminus

140

275

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
5tej-assembly1.cif.gz_A structure of 4-hydroxy-tetrahydrodipicolinate reductase from vibrio vulnificus with 2,5 furan dicarboxylic and nadh 0.9619 3 266
5us6-assembly1.cif.gz_D structure of dihydrodipicolinate reductase from vibrio vulnificus bound to nadh and 2,6 pyridine dicarboxylic acid with intact polyhistidine tag 0.9579 3 266
5us6-assembly2.cif.gz_H structure of dihydrodipicolinate reductase from vibrio vulnificus bound to nadh and 2,6 pyridine dicarboxylic acid with intact polyhistidine tag 0.9533 3 266
3ijp-assembly1.cif.gz_B crystal structure of dihydrodipicolinate reductase from bartonella henselae at 2.0a resolution 0.9515 3 267
5tej-assembly1.cif.gz_A structure of 4-hydroxy-tetrahydrodipicolinate reductase from vibrio vulnificus with 2,5 furan dicarboxylic and nadh 0.9479 3 266
ID Description Score Start End Superfamily
3ijpA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9595 3 267 3.40.50.720
af_P04036_4_119_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9523 1 115 3.40.50.720
5us6H01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9519 3 266 3.40.50.720
af_P04036_6_261_2.40.10.10 Mainly Beta;Beta Barrel;Thrombin, subunit H;Trypsin-like serine proteases 0.9503 3 258 2.40.10.10
5ugjB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9498 3 266 3.40.50.720
ID Description Score Start End GO Terms
AF-K0VT51-F1-model_v4 Dihydrodipicolinate reductase (EC 1.17.1.8) 0.9901 3 67 GO:0008839
GO:0009089
AF-X1M6F1-F1-model_v4 Dihydrodipicolinate reductase N-terminal domain-containing protein 0.9783 3 129 GO:0005829
GO:0008839
GO:0009089
GO:0019877
AF-A7IC74-F1-model_v4 4-hydroxy-tetrahydrodipicolinate reductase (HTPA reductase) (EC 1.17.1.8) 0.9766 2 266 GO:0005829
GO:0008839
GO:0009089
GO:0016726
GO:0019877
GO:0050661
GO:0051287
AF-A0A353GAX8-F1-model_v4 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) 0.9736 3 143 GO:0005829
GO:0008839
GO:0009089
GO:0019877
AF-A0A436R1V4-F1-model_v4 4-hydroxy-tetrahydrodipicolinate reductase 0.9736 2 121 GO:0005829
GO:0008839
GO:0009089
GO:0019877

Map