F333587

General Info

Members Datasets Scaffolds Average Seq Length
221 94 220 120

Family's Representative Sequence

Representative Sequence 3300037418|Ga0395900_0163168|Ga0395900_0163168_1094_1507
Length 137
Sequence MVAVIFHCRQGVDGAMLSWASILYGATLSAIVAGVALATLTRARPPAVLLTGVLATAAGPLAWNAILRATHASQFFTDAPLRLLPASWQDTGSGVFALAATAVLLGVGPLATSPARRTIGLAVLCGLAAFLVDVYLY

Samples

Sample ID Description Type Environment
1 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
12 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
16 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
17 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
18 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
19 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
20 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
25 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
26 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
27 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
30 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
31 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
36 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
37 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
38 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
39 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
40 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
41 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
42 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
43 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
56 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
57 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
58 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
59 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
60 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
61 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
62 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
63 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
64 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
65 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
66 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
67 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
68 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
69 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
70 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
71 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
72 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
73 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
74 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
75 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
76 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
77 3300042000 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z081617_5539 Metagenome Rhizosphere
78 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
79 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
80 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
81 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
82 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
83 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
84 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
85 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
86 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
87 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
88 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
89 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
90 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
91 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
92 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
93 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
94 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.55
Metatranscriptomes 0
Isolates 0.45

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.45
Nodule 0
Rhizoplane 0
Rhizosphere 96.83
Stem 0
Stem Tuber 0
Unclassified 2.71

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10001028 3300003203 Bacteria 13036
2 JGI25406J46586_10004822 3300003203 Bacteria 6272
3 JGI25406J46586_10005194 3300003203 Bacteria 6037
4 JGI25406J46586_10036761 3300003203 Bacteria 1773
5 JGI25406J46586_10125897 3300003203 Bacteria 752
6 JGI25406J46586_10225463 3300003203 Unclassified 548
7 Ga0070683_100011218 3300005329 Bacteria 7731
8 Ga0070683_101059381 3300005329 Bacteria 779
9 Ga0070680_100059664 3300005336 Unclassified 3122
10 Ga0068868_101715523 3300005338 Unclassified 592
11 Ga0070689_101215746 3300005340 Bacteria 677
12 Ga0070675_101799792 3300005354 Unclassified 565
13 Ga0070705_100547363 3300005440 Bacteria 887
14 Ga0070681_10008067 3300005458 Bacteria 10307
15 Ga0070681_10039198 3300005458 Bacteria 4749
16 Ga0070681_10085182 3300005458 Bacteria 3113
17 Ga0070706_100073907 3300005467 Bacteria 3156
18 Ga0070707_100284492 3300005468 Bacteria 1607
19 Ga0070699_100107152 3300005518 Bacteria 2452
20 Ga0070699_100403439 3300005518 Bacteria 1236
21 Ga0070679_100009395 3300005530 Bacteria 9249
22 Ga0070684_100074375 3300005535 Plasmid 2995
23 Ga0070697_100679258 3300005536 Bacteria 908
24 Ga0070686_100617270 3300005544 Bacteria 856
25 Ga0070695_100002975 3300005545 Bacteria 9877
26 Ga0070696_100008230 3300005546 Bacteria 6979
27 Ga0070693_101397478 3300005547 Bacteria 544
28 Ga0070704_100234816 3300005549 Bacteria 1498
29 Ga0070704_101906130 3300005549 Bacteria 551
30 Ga0070664_100596102 3300005564 Bacteria 1024
31 Ga0068857_100432145 3300005577 Unclassified 1229
32 Ga0068857_100479094 3300005577 Bacteria 1166
33 Ga0068856_100104149 3300005614 Bacteria 2831
34 Ga0068861_101564321 3300005719 Unclassified 649
35 Ga0081538_10006148 3300005981 Bacteria 10649
36 Ga0081538_10078005 3300005981 Bacteria 1780
37 Ga0081540_1007842 3300005983 Bacteria 7547
38 Ga0081540_1101407 3300005983 Bacteria 1239
39 Ga0081539_10000186 3300005985 Bacteria 147547
40 Ga0081539_10000527 3300005985 Bacteria 79552
41 Ga0081539_10000573 3300005985 Bacteria 76094
42 Ga0081539_10002553 3300005985 Bacteria 25265
43 Ga0081539_10007298 3300005985 Bacteria 10146
44 Ga0081539_10008458 3300005985 Bacteria 8957
45 Ga0081539_10011723 3300005985 Bacteria 6877
46 Ga0081539_10015994 3300005985 Bacteria 5402
47 Ga0081539_10036241 3300005985 Bacteria 2955
48 Ga0081539_10037700 3300005985 Bacteria 2875
49 Ga0081539_10039686 3300005985 Bacteria 2774
50 Ga0081539_10069038 3300005985 Bacteria 1904
51 Ga0081539_10104181 3300005985 Bacteria 1440
52 Ga0081539_10292471 3300005985 Bacteria 704
53 Ga0075428_100545515 3300006844 Bacteria 1239
54 Ga0075430_100060569 3300006846 Bacteria 3181
55 Ga0075431_100003981 3300006847 Bacteria 14403
56 Ga0075431_100103397 3300006847 Bacteria 2940
57 Ga0075431_100674331 3300006847 Bacteria 1013
58 Ga0105244_10009052 3300009036 Bacteria 6156
59 Ga0111539_10595865 3300009094 Bacteria 1287
60 Ga0105245_10824012 3300009098 Bacteria 967
61 Ga0114129_10388157 3300009147 Bacteria 1842
62 Ga0114129_10453745 3300009147 Bacteria 1681
63 Ga0114129_10602694 3300009147 Bacteria 1423
64 Ga0105237_10005990 3300009545 Bacteria 13614
65 Ga0105239_10030112 3300010375 Bacteria 5968
66 Ga0105246_10024216 3300011119 Bacteria 3941
67 Ga0157370_11579829 3300013104 Bacteria 589
68 Ga0157369_10016096 3300013105 Bacteria 8415
69 Ga0157372_12784357 3300013307 Unclassified 561
70 Ga0163163_10983893 3300014325 Bacteria 907
71 Ga0157379_10627805 3300014968 Bacteria 1004
72 Ga0207655_1010809 3300025728 Bacteria 5502
73 Ga0207684_10173348 3300025910 Bacteria 1859
74 Ga0207707_10045016 3300025912 Unclassified 3846
75 Ga0207707_10067575 3300025912 Bacteria 3113
76 Ga0207707_10178951 3300025912 Bacteria 1852
77 Ga0207671_10021033 3300025914 Plasmid 4957
78 Ga0207660_10355575 3300025917 Bacteria 1174
79 Ga0207652_10104330 3300025921 Bacteria 2507
80 Ga0207646_10223375 3300025922 Bacteria 1702
81 Ga0207690_11007770 3300025932 Bacteria 693
82 Ga0207679_11286549 3300025945 Bacteria 671
83 Ga0207651_10887271 3300025960 Unclassified 794
84 Ga0207674_10620054 3300026116 Unclassified 1045
85 Ga0207675_102486256 3300026118 Unclassified 529
86 Ga0307408_100003960 3300031548 Bacteria 10087
87 Ga0307408_100259398 3300031548 Bacteria 1438
88 Ga0307408_100385994 3300031548 Bacteria 1198
89 Ga0307408_100581735 3300031548 Bacteria 992
90 Ga0307408_100900147 3300031548 Bacteria 810
91 Ga0307508_10267622 3300031616 Unclassified 1303
92 Ga0307516_10009673 3300031730 Bacteria 10712
93 Ga0307405_10009675 3300031731 Bacteria 4954
94 Ga0307405_10158527 3300031731 Bacteria 1600
95 Ga0307405_10212170 3300031731 Bacteria 1414
96 Ga0307405_10497647 3300031731 Bacteria 976
97 Ga0307405_10776795 3300031731 Bacteria 800
98 Ga0307405_10803208 3300031731 Unclassified 788
99 Ga0307405_11655307 3300031731 Bacteria 566
100 Ga0307405_12131900 3300031731 Unclassified 503
101 Ga0307413_10020100 3300031824 Bacteria 3544
102 Ga0307413_10043751 3300031824 Bacteria 2641
103 Ga0307413_10107028 3300031824 Bacteria 1862
104 Ga0307413_10157025 3300031824 Bacteria 1593
105 Ga0307413_10366079 3300031824 Bacteria 1118
106 Ga0307413_10762624 3300031824 Bacteria 810
107 Ga0307413_10906749 3300031824 Bacteria 749
108 Ga0307413_11058109 3300031824 Bacteria 698
109 Ga0307413_11845117 3300031824 Bacteria 542
110 Ga0307518_10127060 3300031838 Bacteria 1797
111 Ga0307518_10521216 3300031838 Bacteria 602
112 Ga0307410_10001121 3300031852 Bacteria 11721
113 Ga0307410_10033443 3300031852 Bacteria 3320
114 Ga0307410_10147436 3300031852 Bacteria 1748
115 Ga0307410_10417392 3300031852 Bacteria 1088
116 Ga0307410_10423912 3300031852 Bacteria 1080
117 Ga0307410_10607682 3300031852 Bacteria 913
118 Ga0307410_10670493 3300031852 Bacteria 871
119 Ga0307410_10714753 3300031852 Bacteria 846
120 Ga0307410_10945499 3300031852 Unclassified 740
121 Ga0307410_11180403 3300031852 Unclassified 666
122 Ga0307406_10001026 3300031901 Bacteria 15547
123 Ga0307406_10020949 3300031901 Bacteria 3860
124 Ga0307406_10251673 3300031901 Bacteria 1331
125 Ga0307406_10565583 3300031901 Bacteria 932
126 Ga0307406_10643008 3300031901 Bacteria 879
127 Ga0307406_11322701 3300031901 Unclassified 629
128 Ga0307406_12107833 3300031901 Bacteria 505
129 Ga0307407_10011051 3300031903 Bacteria 4281
130 Ga0307407_10036854 3300031903 Bacteria 2698
131 Ga0307407_10135107 3300031903 Bacteria 1583
132 Ga0307407_10267637 3300031903 Bacteria 1178
133 Ga0307407_10539551 3300031903 Bacteria 860
134 Ga0307407_10578683 3300031903 Bacteria 833
135 Ga0307407_10829321 3300031903 Bacteria 705
136 Ga0307412_10096411 3300031911 Bacteria 2082
137 Ga0307412_10105188 3300031911 Bacteria 2004
138 Ga0307412_10169509 3300031911 Bacteria 1631
139 Ga0307412_10169749 3300031911 Bacteria 1630
140 Ga0307412_10511921 3300031911 Unclassified 1001
141 Ga0307409_100000146 3300031995 Bacteria 26640
142 Ga0307409_100005437 3300031995 Bacteria 7331
143 Ga0307409_100223571 3300031995 Bacteria 1701
144 Ga0307409_100242998 3300031995 Bacteria 1640
145 Ga0307409_100312777 3300031995 Bacteria 1466
146 Ga0307409_100377905 3300031995 Bacteria 1346
147 Ga0307409_100410440 3300031995 Bacteria 1296
148 Ga0307409_100441173 3300031995 Bacteria 1254
149 Ga0307409_100834203 3300031995 Bacteria 931
150 Ga0307409_100919245 3300031995 Bacteria 889
151 Ga0307409_100956910 3300031995 Bacteria 872
152 Ga0307409_101848294 3300031995 Bacteria 633
153 Ga0307409_101980450 3300031995 Bacteria 612
154 Ga0307409_102107686 3300031995 Unclassified 593
155 Ga0307409_102638737 3300031995 Unclassified 531
156 Ga0307416_100000064 3300032002 Bacteria 95532
157 Ga0307416_100000380 3300032002 Bacteria 23065
158 Ga0307416_100015661 3300032002 Bacteria 5244
159 Ga0307416_100152996 3300032002 Bacteria 2119
160 Ga0307416_100177448 3300032002 Bacteria 1992
161 Ga0307416_100358319 3300032002 Bacteria 1479
162 Ga0307416_100558644 3300032002 Bacteria 1219
163 Ga0307416_100668793 3300032002 Bacteria 1125
164 Ga0307416_100860793 3300032002 Bacteria 1005
165 Ga0307416_100867307 3300032002 Bacteria 1001
166 Ga0307416_100991026 3300032002 Unclassified 943
167 Ga0307416_100997003 3300032002 Bacteria 940
168 Ga0307416_102038609 3300032002 Bacteria 676
169 Ga0307416_102100445 3300032002 Bacteria 667
170 Ga0307416_102406416 3300032002 Unclassified 626
171 Ga0307416_102697873 3300032002 Bacteria 593
172 Ga0307414_10196446 3300032004 Bacteria 1637
173 Ga0307414_10221534 3300032004 Bacteria 1553
174 Ga0307414_10370501 3300032004 Bacteria 1235
175 Ga0307414_10448912 3300032004 Bacteria 1130
176 Ga0307414_10494541 3300032004 Bacteria 1081
177 Ga0307414_11064089 3300032004 Bacteria 746
178 Ga0307414_11093714 3300032004 Bacteria 736
179 Ga0307411_10447205 3300032005 Bacteria 1080
180 Ga0307411_10642597 3300032005 Bacteria 917
181 Ga0307411_11075277 3300032005 Bacteria 724
182 Ga0307411_11335925 3300032005 Unclassified 654
183 Ga0307415_100000359 3300032126 Bacteria 19423
184 Ga0307415_100033224 3300032126 Bacteria 3348
185 Ga0307415_100410319 3300032126 Bacteria 1159
186 Ga0307415_100418485 3300032126 Bacteria 1149
187 Ga0307415_100440520 3300032126 Bacteria 1123
188 Ga0307415_100529874 3300032126 Unclassified 1035
189 Ga0307415_100659894 3300032126 Bacteria 939
190 Ga0307415_101022056 3300032126 Bacteria 769
191 Ga0307415_101094889 3300032126 Bacteria 745
192 Ga0307415_101111206 3300032126 Bacteria 740
193 Ga0307510_10070177 3300033180 Bacteria 3502
194 Ga0395899_1006156 3300037312 Bacteria 502
195 Ga0395900_0163168 3300037418 Bacteria 2272
196 Ga0395900_0282284 3300037418 Bacteria 1652
197 Ga0395898_0396109 3300037466 Bacteria 1317
198 Ga0395905_0065158 3300037471 Bacteria 3411
199 Ga0395901_0023052 3300038443 Bacteria 6381
200 Ga0395901_0264917 3300038443 Bacteria 1788
201 Ga0439453_0021127 3300041408 Bacteria 1172
202 Ga0439437_006137 3300042000 Unclassified 1328
203 Ga0439441_005941 3300042001 Bacteria 1917
204 Ga0439450_081578 3300042008 Bacteria 805
205 Ga0450920_025803 3300042122 Bacteria 1145
206 Ga0439435_0049251 3300042436 Bacteria 1202
207 Ga0466969_0155578 3300044656 Bacteria 1052
208 Ga0466966_0614149 3300044684 Bacteria 655
209 Ga0466961_0081321 3300044693 Bacteria 2050
210 Ga0466971_0055899 3300044719 Bacteria 1780
211 Ga0495607_0467596 3300046501 Bacteria 564
212 Ga0495644_0422285 3300046523 Bacteria 529
213 Ga0495687_009003 3300047443 Bacteria 5639
214 nmdc:mga00v17_922365_c1 3300050491 Bacteria 552
215 nmdc:mga05p37_354993_c1 3300050507 Bacteria 1725
216 nmdc:mga05p37_400747_c1 3300050507 Bacteria 1602
217 nmdc:mga0qj67_197275_c1 3300050509 Bacteria 1635
218 nmdc:mga06r32_32194_c1 3300050510 Bacteria 4931
219 nmdc:mga08y16_274711_c1 3300050511 Bacteria 1739
220 Ga0466962_0072707 3300061719 Bacteria 1643

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300031824 Ga0307413_10366079 Ga0307413_103660792 96
2 3300031995 Ga0307409_100956910 Ga0307409_1009569102 96
3 3300032002 Ga0307416_100358319 Ga0307416_1003583192 96
4 3300032126 Ga0307415_101022056 Ga0307415_1010220561 96
5 3300031901 Ga0307406_10251673 Ga0307406_102516733 98
6 3300031903 Ga0307407_10829321 Ga0307407_108293211 98
7 3300037312 Ga0395899_1006156 Ga0395899_1006156_100_468 98
8 3300037418 Ga0395900_0282284 Ga0395900_0282284_309_749 98
9 3300038443 Ga0395901_0264917 Ga0395901_0264917_151_591 98
10 3300031903 Ga0307407_10135107 Ga0307407_101351072 106
11 3300006844 Ga0075428_100545515 Ga0075428_1005455152 107
12 3300006847 Ga0075431_100103397 Ga0075431_1001033975 107
13 3300050510 nmdc:mga06r32_32194_c1 nmdc:mga06r32_32194_c1_2035_2406 107
14 3300005547 Ga0070693_101397478 Ga0070693_1013974781 108
15 3300005329 Ga0070683_101059381 Ga0070683_1010593812 109
16 3300009036 Ga0105244_10009052 Ga0105244_100090527 109
17 3300011119 Ga0105246_10024216 Ga0105246_100242167 109
18 3300025932 Ga0207690_11007770 Ga0207690_110077702 109
19 3300050507 nmdc:mga05p37_354993_c1 nmdc:mga05p37_354993_c1_636_968 109
20 3300046501 Ga0495607_0467596 Ga0495607_0467596_88_456 110
21 3300031852 Ga0307410_10147436 Ga0307410_101474362 111
22 3300031901 Ga0307406_12107833 Ga0307406_121078331 111
23 3300031995 Ga0307409_100223571 Ga0307409_1002235712 111
24 3300032002 Ga0307416_100991026 Ga0307416_1009910262 111
25 3300032126 Ga0307415_100440520 Ga0307415_1004405202 111
26 3300005985 Ga0081539_10000573 Ga0081539_1000057321 112
27 3300005985 Ga0081539_10069038 Ga0081539_100690382 112
28 3300009147 Ga0114129_10388157 Ga0114129_103881573 112
29 3300031731 Ga0307405_10776795 Ga0307405_107767952 112
30 3300031911 Ga0307412_10169749 Ga0307412_101697492 112
31 3300032126 Ga0307415_100418485 Ga0307415_1004184852 112
32 3300032126 Ga0307415_100659894 Ga0307415_1006598942 112
33 3300046523 Ga0495644_0422285 Ga0495644_0422285_134_490 112
34 3300005981 Ga0081538_10078005 Ga0081538_100780052 113
35 3300009094 Ga0111539_10595865 Ga0111539_105958651 113
36 3300009147 Ga0114129_10453745 Ga0114129_104537451 113
37 3300031548 Ga0307408_100581735 Ga0307408_1005817352 113
38 3300031731 Ga0307405_10158527 Ga0307405_101585272 113
39 3300031731 Ga0307405_10212170 Ga0307405_102121701 113
40 3300031824 Ga0307413_10157025 Ga0307413_101570251 113
41 3300031824 Ga0307413_10762624 Ga0307413_107626242 113
42 3300031852 Ga0307410_10033443 Ga0307410_100334432 113
43 3300031852 Ga0307410_10423912 Ga0307410_104239122 113
44 3300031901 Ga0307406_10020949 Ga0307406_100209492 113
45 3300031903 Ga0307407_10036854 Ga0307407_100368542 113
46 3300031911 Ga0307412_10096411 Ga0307412_100964112 113
47 3300031995 Ga0307409_100834203 Ga0307409_1008342031 113
48 3300031995 Ga0307409_102638737 Ga0307409_1026387371 113
49 3300032002 Ga0307416_100177448 Ga0307416_1001774483 113
50 3300032002 Ga0307416_102406416 Ga0307416_1024064161 113
51 3300032002 Ga0307416_102697873 Ga0307416_1026978731 113
52 3300032004 Ga0307414_10196446 Ga0307414_101964464 113
53 3300032004 Ga0307414_11093714 Ga0307414_110937141 113
54 3300032005 Ga0307411_10447205 Ga0307411_104472052 113
55 3300032126 Ga0307415_100033224 Ga0307415_1000332242 113
56 3300032126 Ga0307415_101094889 Ga0307415_1010948891 113
57 3300050507 nmdc:mga05p37_400747_c1 nmdc:mga05p37_400747_c1_1014_1382 113
58 3300050511 nmdc:mga08y16_274711_c1 nmdc:mga08y16_274711_c1_109_477 113
59 3300032002 Ga0307416_100668793 Ga0307416_1006687931 114
60 3300031995 Ga0307409_101980450 Ga0307409_1019804501 115
61 3300032126 Ga0307415_100410319 Ga0307415_1004103191 115
62 3300003203 JGI25406J46586_10005194 JGI25406J46586_100051943 116
63 3300005985 Ga0081539_10000527 Ga0081539_1000052742 116
64 iso_pu_bacteria 2558860112 2558906294 117
65 3300005329 Ga0070683_100011218 Ga0070683_1000112186 119
66 3300005336 Ga0070680_100059664 Ga0070680_1000596644 119
67 3300005458 Ga0070681_10008067 Ga0070681_100080679 119
68 3300005458 Ga0070681_10085182 Ga0070681_100851822 119
69 3300005530 Ga0070679_100009395 Ga0070679_1000093957 119
70 3300005535 Ga0070684_100074375 Ga0070684_1000743754 119
71 3300005614 Ga0068856_100104149 Ga0068856_1001041493 119
72 3300005981 Ga0081538_10006148 Ga0081538_100061486 119
73 3300009545 Ga0105237_10005990 Ga0105237_100059904 119
74 3300010375 Ga0105239_10030112 Ga0105239_100301123 119
75 3300013104 Ga0157370_11579829 Ga0157370_115798291 119
76 3300013105 Ga0157369_10016096 Ga0157369_100160962 119
77 3300013307 Ga0157372_12784357 Ga0157372_127843571 119
78 3300025912 Ga0207707_10045016 Ga0207707_100450161 119
79 3300025912 Ga0207707_10067575 Ga0207707_100675752 119
80 3300025914 Ga0207671_10021033 Ga0207671_100210335 119
81 3300025917 Ga0207660_10355575 Ga0207660_103555752 119
82 3300025921 Ga0207652_10104330 Ga0207652_101043302 119
83 3300003203 JGI25406J46586_10036761 JGI25406J46586_100367612 120
84 3300005440 Ga0070705_100547363 Ga0070705_1005473632 120
85 3300005458 Ga0070681_10039198 Ga0070681_100391988 120
86 3300005467 Ga0070706_100073907 Ga0070706_1000739073 120
87 3300005468 Ga0070707_100284492 Ga0070707_1002844922 120
88 3300005518 Ga0070699_100403439 Ga0070699_1004034392 120
89 3300005536 Ga0070697_100679258 Ga0070697_1006792582 120
90 3300005545 Ga0070695_100002975 Ga0070695_10000297512 120
91 3300005546 Ga0070696_100008230 Ga0070696_1000082308 120
92 3300005549 Ga0070704_100234816 Ga0070704_1002348163 120
93 3300005983 Ga0081540_1007842 Ga0081540_10078429 120
94 3300005985 Ga0081539_10008458 Ga0081539_100084587 120
95 3300005985 Ga0081539_10015994 Ga0081539_100159944 120
96 3300005985 Ga0081539_10036241 Ga0081539_100362412 120
97 3300005985 Ga0081539_10039686 Ga0081539_100396864 120
98 3300009098 Ga0105245_10824012 Ga0105245_108240122 120
99 3300025728 Ga0207655_1010809 Ga0207655_10108093 120
100 3300025910 Ga0207684_10173348 Ga0207684_101733482 120
101 3300025912 Ga0207707_10178951 Ga0207707_101789512 120
102 3300025922 Ga0207646_10223375 Ga0207646_102233752 120
103 3300031731 Ga0307405_11655307 Ga0307405_116553071 120
104 3300032002 Ga0307416_102100445 Ga0307416_1021004451 120
105 3300003203 JGI25406J46586_10001028 JGI25406J46586_100010284 121
106 3300003203 JGI25406J46586_10004822 JGI25406J46586_100048225 121
107 3300003203 JGI25406J46586_10125897 JGI25406J46586_101258971 121
108 3300003203 JGI25406J46586_10225463 JGI25406J46586_102254631 121
109 3300005338 Ga0068868_101715523 Ga0068868_1017155231 121
110 3300005340 Ga0070689_101215746 Ga0070689_1012157461 121
111 3300005354 Ga0070675_101799792 Ga0070675_1017997921 121
112 3300005518 Ga0070699_100107152 Ga0070699_1001071521 121
113 3300005544 Ga0070686_100617270 Ga0070686_1006172702 121
114 3300005549 Ga0070704_101906130 Ga0070704_1019061301 121
115 3300005564 Ga0070664_100596102 Ga0070664_1005961022 121
116 3300005577 Ga0068857_100432145 Ga0068857_1004321452 121
117 3300005577 Ga0068857_100479094 Ga0068857_1004790942 121
118 3300005719 Ga0068861_101564321 Ga0068861_1015643211 121
119 3300005983 Ga0081540_1101407 Ga0081540_11014072 121
120 3300005985 Ga0081539_10000186 Ga0081539_1000018632 121
121 3300005985 Ga0081539_10002553 Ga0081539_1000255327 121
122 3300005985 Ga0081539_10007298 Ga0081539_100072982 121
123 3300005985 Ga0081539_10011723 Ga0081539_100117232 121
124 3300005985 Ga0081539_10037700 Ga0081539_100377004 121
125 3300005985 Ga0081539_10104181 Ga0081539_101041812 121
126 3300005985 Ga0081539_10292471 Ga0081539_102924712 121
127 3300006846 Ga0075430_100060569 Ga0075430_1000605695 121
128 3300006847 Ga0075431_100003981 Ga0075431_10000398116 121
129 3300006847 Ga0075431_100674331 Ga0075431_1006743311 121
130 3300009147 Ga0114129_10602694 Ga0114129_106026942 121
131 3300014325 Ga0163163_10983893 Ga0163163_109838932 121
132 3300014968 Ga0157379_10627805 Ga0157379_106278052 121
133 3300025945 Ga0207679_11286549 Ga0207679_112865491 121
134 3300025960 Ga0207651_10887271 Ga0207651_108872711 121
135 3300026116 Ga0207674_10620054 Ga0207674_106200542 121
136 3300026118 Ga0207675_102486256 Ga0207675_1024862561 121
137 3300031548 Ga0307408_100003960 Ga0307408_1000039604 121
138 3300031548 Ga0307408_100259398 Ga0307408_1002593983 121
139 3300031548 Ga0307408_100385994 Ga0307408_1003859942 121
140 3300031548 Ga0307408_100900147 Ga0307408_1009001471 121
141 3300031616 Ga0307508_10267622 Ga0307508_102676221 121
142 3300031730 Ga0307516_10009673 Ga0307516_100096737 121
143 3300031731 Ga0307405_10009675 Ga0307405_100096754 121
144 3300031731 Ga0307405_10497647 Ga0307405_104976472 121
145 3300031731 Ga0307405_10803208 Ga0307405_108032081 121
146 3300031731 Ga0307405_12131900 Ga0307405_121319002 121
147 3300031824 Ga0307413_10020100 Ga0307413_100201003 121
148 3300031824 Ga0307413_10043751 Ga0307413_100437514 121
149 3300031824 Ga0307413_10107028 Ga0307413_101070282 121
150 3300031824 Ga0307413_10906749 Ga0307413_109067491 121
151 3300031824 Ga0307413_11058109 Ga0307413_110581091 121
152 3300031824 Ga0307413_11845117 Ga0307413_118451171 121
153 3300031838 Ga0307518_10127060 Ga0307518_101270602 121
154 3300031838 Ga0307518_10521216 Ga0307518_105212161 121
155 3300031852 Ga0307410_10001121 Ga0307410_100011216 121
156 3300031852 Ga0307410_10417392 Ga0307410_104173922 121
157 3300031852 Ga0307410_10607682 Ga0307410_106076822 121
158 3300031852 Ga0307410_10670493 Ga0307410_106704932 121
159 3300031852 Ga0307410_10714753 Ga0307410_107147531 121
160 3300031852 Ga0307410_10945499 Ga0307410_109454991 121
161 3300031852 Ga0307410_11180403 Ga0307410_111804031 121
162 3300031901 Ga0307406_10001026 Ga0307406_1000102618 121
163 3300031901 Ga0307406_10565583 Ga0307406_105655831 121
164 3300031901 Ga0307406_10643008 Ga0307406_106430081 121
165 3300031901 Ga0307406_11322701 Ga0307406_113227011 121
166 3300031903 Ga0307407_10011051 Ga0307407_100110512 121
167 3300031903 Ga0307407_10267637 Ga0307407_102676372 121
168 3300031903 Ga0307407_10539551 Ga0307407_105395512 121
169 3300031903 Ga0307407_10578683 Ga0307407_105786831 121
170 3300031911 Ga0307412_10105188 Ga0307412_101051883 121
171 3300031911 Ga0307412_10169509 Ga0307412_101695091 121
172 3300031911 Ga0307412_10511921 Ga0307412_105119212 121
173 3300031995 Ga0307409_100000146 Ga0307409_10000014612 121
174 3300031995 Ga0307409_100005437 Ga0307409_1000054375 121
175 3300031995 Ga0307409_100242998 Ga0307409_1002429983 121
176 3300031995 Ga0307409_100312777 Ga0307409_1003127771 121
177 3300031995 Ga0307409_100377905 Ga0307409_1003779052 121
178 3300031995 Ga0307409_100410440 Ga0307409_1004104402 121
179 3300031995 Ga0307409_100441173 Ga0307409_1004411733 121
180 3300031995 Ga0307409_100919245 Ga0307409_1009192452 121
181 3300031995 Ga0307409_101848294 Ga0307409_1018482941 121
182 3300031995 Ga0307409_102107686 Ga0307409_1021076862 121
183 3300032002 Ga0307416_100000064 Ga0307416_10000006491 121
184 3300032002 Ga0307416_100000380 Ga0307416_1000003807 121
185 3300032002 Ga0307416_100015661 Ga0307416_1000156614 121
186 3300032002 Ga0307416_100152996 Ga0307416_1001529961 121
187 3300032002 Ga0307416_100558644 Ga0307416_1005586443 121
188 3300032002 Ga0307416_100860793 Ga0307416_1008607932 121
189 3300032002 Ga0307416_100867307 Ga0307416_1008673072 121
190 3300032002 Ga0307416_100997003 Ga0307416_1009970032 121
191 3300032002 Ga0307416_102038609 Ga0307416_1020386091 121
192 3300032004 Ga0307414_10221534 Ga0307414_102215342 121
193 3300032004 Ga0307414_10370501 Ga0307414_103705013 121
194 3300032004 Ga0307414_10448912 Ga0307414_104489122 121
195 3300032004 Ga0307414_10494541 Ga0307414_104945411 121
196 3300032004 Ga0307414_11064089 Ga0307414_110640891 121
197 3300032005 Ga0307411_10642597 Ga0307411_106425972 121
198 3300032005 Ga0307411_11075277 Ga0307411_110752771 121
199 3300032005 Ga0307411_11335925 Ga0307411_113359252 121
200 3300032126 Ga0307415_100000359 Ga0307415_1000003598 121
201 3300032126 Ga0307415_100529874 Ga0307415_1005298742 121
202 3300032126 Ga0307415_101111206 Ga0307415_1011112062 121
203 3300033180 Ga0307510_10070177 Ga0307510_100701776 121
204 3300037418 Ga0395900_0163168 Ga0395900_0163168_1094_1507 121
205 3300037466 Ga0395898_0396109 Ga0395898_0396109_237_650 121
206 3300037471 Ga0395905_0065158 Ga0395905_0065158_2687_3100 121
207 3300038443 Ga0395901_0023052 Ga0395901_0023052_2563_2976 121
208 3300041408 Ga0439453_0021127 Ga0439453_0021127_699_1067 121
209 3300042000 Ga0439437_006137 Ga0439437_006137_502_870 121
210 3300042001 Ga0439441_005941 Ga0439441_005941_229_597 121
211 3300042008 Ga0439450_081578 Ga0439450_081578_124_492 121
212 3300042122 Ga0450920_025803 Ga0450920_025803_745_1113 121
213 3300042436 Ga0439435_0049251 Ga0439435_0049251_325_693 121
214 3300044656 Ga0466969_0155578 Ga0466969_0155578_643_1008 121
215 3300044684 Ga0466966_0614149 Ga0466966_0614149_188_553 121
216 3300044693 Ga0466961_0081321 Ga0466961_0081321_471_836 121
217 3300044719 Ga0466971_0055899 Ga0466971_0055899_686_1051 121
218 3300047443 Ga0495687_009003 Ga0495687_009003_2458_2826 121
219 3300050491 nmdc:mga00v17_922365_c1 nmdc:mga00v17_922365_c1_129_497 121
220 3300050509 nmdc:mga0qj67_197275_c1 nmdc:mga0qj67_197275_c1_981_1349 121
221 3300061719 Ga0466962_0072707 Ga0466962_0072707_722_1087 121

Structural Annotation

Top 5 Hits

ID Description Score Start End
4lm4-assembly3.cif.gz_A crystal structure of pde10a2 with fragment zt902 0.4713 8 119
5b02-assembly2.cif.gz_D structure of the prenyltransferase moen5 with a fusion protein tag of sso7d 0.4667 3 114
4dve-assembly1.cif.gz_A crystal structure at 2.1 a of the s-component for biotin from an ecf-type abc transporter 0.46 5 118
5b0k-assembly1.cif.gz_A structure of moen5-sso7d fusion protein in complex with beta-decyl maltoside 0.4589 1 114
4lm4-assembly3.cif.gz_A crystal structure of pde10a2 with fragment zt902 0.4494 8 119
ID Description Score Start End Superfamily
af_P95210_10_113_1.10.287.1260 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.5073 5 114 1.10.287.1260
af_G5EEW0_286_477_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.4966 5 117 1.20.1640.10
af_P95210_10_113_1.10.287.1260 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.4882 5 114 1.10.287.1260
af_F1LQ09_369_481_1.20.58.420 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;AHSP 0.4839 23 111 1.20.58.420
af_Q2FV70_137_332_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.4748 5 118 1.20.1640.10
ID Description Score Start End GO Terms
AF-A0A4D4JEF0-F1-model_v4 Uncharacterized protein 0.9093 1 119 GO:0016020
AF-A0A538JNP5-F1-model_v4 Lycopene cyclase domain-containing protein 0.9073 1 119 GO:0016020
AF-A0A2N3WS47-F1-model_v4 Uncharacterized protein 0.9068 1 119 GO:0016020
AF-A0A4D4JEF0-F1-model_v4 Uncharacterized protein 0.9022 1 119 GO:0016020
AF-A0A538JNP5-F1-model_v4 Lycopene cyclase domain-containing protein 0.9002 1 119 GO:0016020

Feature Viewer

pLDDT pTM Quality
88.63 0.84 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map