F332770

General Info

Members Datasets Scaffolds Average Seq Length
220 164 440 192

Family's Representative Sequence

Representative Sequence 3300053090|Ga0500646_0000312|Ga0500646_0000312_2073_2729
Length 218
Sequence MAVHLTRIYTKTGDAGTTALGDGSRVPKTSARIEAYADVDETNAAIGVALALGHLPDDVRAALSSVQNDLFDVGADLCSPITPDPAYPPLRVTEAYVTRLEGWCDEFNERLGKLDSFILSGGTPGAALLHVARTVARRAERRTWSLIETDPERTNPLTAKYLNRLSDLLFILARTANPDGDVKWVPGGSGRSELASPAVATKEGTGGSTATEGEEGSA

Samples

Sample ID Description Type Environment
1 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
16 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
36 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
37 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
38 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
39 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
40 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
41 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
42 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
53 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
54 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
57 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
58 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
59 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
60 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
61 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
62 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
63 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
64 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
65 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
103 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
106 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
107 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
108 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
109 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
110 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
111 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
112 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
113 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
114 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
115 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
116 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
117 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
118 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
119 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
120 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
121 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
122 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
123 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
124 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
125 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
126 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
127 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
128 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
129 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
130 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
131 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
132 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
133 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
134 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
135 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
136 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
137 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
138 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
139 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
140 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
141 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
142 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
143 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
144 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
145 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
146 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
153 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
154 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
155 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
156 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
157 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
158 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
159 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
160 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
161 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
162 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
163 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
164 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.27
Metatranscriptomes 2.27
Isolates 0.45

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.27
Nodule 0
Rhizoplane 4.55
Rhizosphere 90.91
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500646_0000312 3300053090 Bacteria 14874
2 JGI25406J46586_10084960 3300003203 Bacteria 963
3 Ga0070658_10062751 3300005327 Bacteria 3028
4 Ga0070683_100005205 3300005329 Bacteria 10824
5 Ga0068869_100023360 3300005334 Bacteria 4269
6 Ga0070680_100237052 3300005336 Bacteria 1541
7 Ga0068868_100170552 3300005338 Bacteria 1801
8 Ga0070660_100041980 3300005339 Bacteria 3489
9 Ga0070660_100449496 3300005339 Bacteria 1069
10 Ga0070689_100289080 3300005340 Bacteria 1362
11 Ga0070687_100054803 3300005343 Bacteria 2079
12 Ga0070661_100010604 3300005344 Bacteria 6410
13 Ga0070661_100042524 3300005344 Bacteria 3317
14 Ga0070668_100275320 3300005347 Bacteria 1404
15 Ga0070669_100055937 3300005353 Bacteria 2891
16 Ga0070659_100216800 3300005366 Bacteria 1579
17 Ga0070709_10033519 3300005434 Bacteria 3106
18 Ga0070714_100161612 3300005435 Bacteria 2027
19 Ga0070711_100429579 3300005439 Bacteria 1078
20 Ga0070700_100010570 3300005441 Bacteria 5100
21 Ga0070663_100005664 3300005455 Bacteria 7443
22 Ga0070662_100004579 3300005457 Bacteria 8755
23 Ga0070681_10126956 3300005458 Bacteria 2483
24 Ga0070679_100140351 3300005530 Bacteria 2396
25 Ga0070684_100007006 3300005535 Bacteria 8758
26 Ga0070684_100205448 3300005535 Bacteria 1795
27 Ga0070684_100248703 3300005535 Bacteria 1625
28 Ga0070684_100450579 3300005535 Bacteria 1189
29 Ga0070693_100161790 3300005547 Bacteria 1426
30 Ga0070664_100010653 3300005564 Bacteria 7450
31 Ga0070664_100154530 3300005564 Bacteria 2027
32 Ga0070664_100184807 3300005564 Bacteria 1854
33 Ga0070664_100222655 3300005564 Bacteria 1688
34 Ga0068857_100010602 3300005577 Bacteria 8012
35 Ga0068857_100023508 3300005577 Bacteria 5426
36 Ga0068857_100056511 3300005577 Bacteria 3482
37 Ga0068857_100581581 3300005577 Bacteria 1057
38 Ga0068857_100733568 3300005577 Bacteria 940
39 Ga0068854_100135661 3300005578 Bacteria 1884
40 Ga0068856_100146883 3300005614 Bacteria 2366
41 Ga0068856_101087487 3300005614 Bacteria 817
42 Ga0068852_100057524 3300005616 Bacteria 3365
43 Ga0068859_100527995 3300005617 Bacteria 1275
44 Ga0068864_100007621 3300005618 Bacteria 8914
45 Ga0068864_100063746 3300005618 Bacteria 3195
46 Ga0068863_100017970 3300005841 Bacteria 6768
47 Ga0068858_100044386 3300005842 Bacteria 4120
48 Ga0068860_100361055 3300005843 Bacteria 1431
49 Ga0081455_10000005 3300005937 Bacteria 327136
50 Ga0081540_1002117 3300005983 Bacteria 16539
51 Ga0081539_10000632 3300005985 Bacteria 71274
52 Ga0070716_100444140 3300006173 Bacteria 944
53 Ga0075428_100317214 3300006844 Bacteria 1675
54 Ga0075430_100002093 3300006846 Bacteria 16502
55 Ga0075430_100183876 3300006846 Bacteria 1738
56 Ga0075431_100216862 3300006847 Bacteria 1953
57 Ga0075429_100129377 3300006880 Bacteria 2208
58 Ga0075429_100590665 3300006880 Bacteria 973
59 Ga0097620_100528000 3300006931 Bacteria 1275
60 Ga0111539_10007578 3300009094 Bacteria 13872
61 Ga0105245_10087003 3300009098 Bacteria 2867
62 Ga0114129_10004347 3300009147 Bacteria 20006
63 Ga0114129_10040539 3300009147 Bacteria 6565
64 Ga0114129_10985881 3300009147 Bacteria 1062
65 Ga0105243_10230271 3300009148 Bacteria 1643
66 Ga0105242_10274209 3300009176 Bacteria 1529
67 Ga0105248_10001351 3300009177 Bacteria 27318
68 Ga0105248_10089729 3300009177 Bacteria 3461
69 Ga0105237_11462351 3300009545 Bacteria 690
70 Ga0105249_10565466 3300009553 Bacteria 1189
71 Ga0105246_10127679 3300011119 Bacteria 1894
72 Ga0157369_10078334 3300013105 Bacteria 3541
73 Ga0157374_11390804 3300013296 Bacteria 724
74 Ga0163163_10001919 3300014325 Bacteria 17600
75 Ga0163163_10185751 3300014325 Bacteria 2126
76 Ga0163163_10712451 3300014325 Bacteria 1067
77 Ga0157377_10511026 3300014745 Bacteria 841
78 Ga0157379_10146039 3300014968 Bacteria 2133
79 Ga0157379_10415810 3300014968 Bacteria 1238
80 Ga0157379_10467465 3300014968 Bacteria 1166
81 Ga0163161_10941078 3300017792 Bacteria 734
82 Ga0197907_10053010 3300020069 Bacteria 1350
83 Ga0206356_10048116 3300020070 Bacteria 2490
84 Ga0206350_10405404 3300020080 Bacteria 1282
85 Ga0206353_11143074 3300020082 Bacteria 2209
86 Ga0213871_10027102 3300021441 Bacteria 1470
87 Ga0224712_10005892 3300022467 Bacteria 3454
88 Ga0207692_10014089 3300025898 Bacteria 3486
89 Ga0207645_10313958 3300025907 Bacteria 1045
90 Ga0207643_10186215 3300025908 Bacteria 1258
91 Ga0207705_10209781 3300025909 Bacteria 1477
92 Ga0207684_10322873 3300025910 Bacteria 1330
93 Ga0207707_10530552 3300025912 Bacteria 1002
94 Ga0207693_10132470 3300025915 Bacteria 1959
95 Ga0207662_10033119 3300025918 Bacteria 3010
96 Ga0207657_10049173 3300025919 Bacteria 3677
97 Ga0207657_10136158 3300025919 Bacteria 2009
98 Ga0207649_10124931 3300025920 Bacteria 1740
99 Ga0207649_10263448 3300025920 Bacteria 1246
100 Ga0207681_10018392 3300025923 Bacteria 4403
101 Ga0207650_10350798 3300025925 Bacteria 1214
102 Ga0207659_10029495 3300025926 Bacteria 3740
103 Ga0207687_10072624 3300025927 Bacteria 2462
104 Ga0207700_10102705 3300025928 Bacteria 2284
105 Ga0207664_10282701 3300025929 Bacteria 1456
106 Ga0207690_10085235 3300025932 Bacteria 2217
107 Ga0207706_10004676 3300025933 Bacteria 12831
108 Ga0207709_10209503 3300025935 Bacteria 1398
109 Ga0207670_10892774 3300025936 Bacteria 744
110 Ga0207704_10288375 3300025938 Bacteria 1251
111 Ga0207665_10551505 3300025939 Bacteria 895
112 Ga0207711_10005878 3300025941 Bacteria 10358
113 Ga0207689_10031359 3300025942 Bacteria 4426
114 Ga0207661_10007055 3300025944 Bacteria 7975
115 Ga0207661_10051227 3300025944 Bacteria 3293
116 Ga0207661_10134610 3300025944 Bacteria 2121
117 Ga0207679_10095126 3300025945 Bacteria 2315
118 Ga0207679_10119130 3300025945 Bacteria 2098
119 Ga0207679_10131863 3300025945 Bacteria 2006
120 Ga0207712_10262989 3300025961 Bacteria 1400
121 Ga0207668_10235271 3300025972 Bacteria 1479
122 Ga0207640_10098080 3300025981 Bacteria 2047
123 Ga0207677_10189829 3300026023 Bacteria 1624
124 Ga0207703_10235781 3300026035 Bacteria 1642
125 Ga0207678_10012913 3300026067 Bacteria 7331
126 Ga0207702_10173330 3300026078 Bacteria 1980
127 Ga0207641_10025487 3300026088 Bacteria 4877
128 Ga0207676_10010215 3300026095 Bacteria 6678
129 Ga0207674_10016171 3300026116 Bacteria 8171
130 Ga0207674_10065009 3300026116 Bacteria 3678
131 Ga0207674_10151275 3300026116 Bacteria 2278
132 Ga0207674_10436874 3300026116 Bacteria 1265
133 Ga0207698_10011112 3300026142 Bacteria 5820
134 Ga0207428_10189881 3300027907 Bacteria 1549
135 Ga0268265_10075321 3300028380 Bacteria 2643
136 Ga0268264_10605011 3300028381 Bacteria 1080
137 Ga0307515_10257702 3300028794 Bacteria 1486
138 Ga0316176_1195499 3300030732 Bacteria 4558
139 Ga0314311_1008904 3300030733 Bacteria 2330
140 Ga0316181_1148784 3300030744 Bacteria 691
141 Ga0307408_100065541 3300031548 Bacteria 2664
142 Ga0307408_100622154 3300031548 Bacteria 962
143 Ga0307508_10042587 3300031616 Bacteria 4072
144 Ga0307405_10004350 3300031731 Bacteria 6678
145 Ga0307405_10332264 3300031731 Bacteria 1165
146 Ga0307410_10011025 3300031852 Bacteria 5152
147 Ga0307410_10576787 3300031852 Bacteria 935
148 Ga0326468_10000969 3300031889 Bacteria 2774
149 Ga0307406_10004032 3300031901 Bacteria 7987
150 Ga0307406_10118713 3300031901 Bacteria 1834
151 Ga0307406_10154225 3300031901 Bacteria 1643
152 Ga0307406_10452713 3300031901 Bacteria 1030
153 Ga0307407_10184769 3300031903 Bacteria 1384
154 Ga0307412_10012576 3300031911 Bacteria 4939
155 Ga0307412_10133953 3300031911 Bacteria 1805
156 Ga0307409_100000412 3300031995 Bacteria 18123
157 Ga0307409_100012228 3300031995 Bacteria 5459
158 Ga0307409_100040048 3300031995 Bacteria 3484
159 Ga0307409_100555897 3300031995 Bacteria 1127
160 Ga0307416_100000798 3300032002 Bacteria 16565
161 Ga0307416_101584245 3300032002 Bacteria 760
162 Ga0307415_100000018 3300032126 Bacteria 70851
163 Ga0307415_100004426 3300032126 Bacteria 7285
164 Ga0307415_100058637 3300032126 Bacteria 2651
165 Ga0307415_100106023 3300032126 Bacteria 2074
166 Ga0307415_100528294 3300032126 Bacteria 1037
167 Ga0307507_10143899 3300033179 Bacteria 1818
168 Ga0373953_0044057 3300035117 Bacteria 1783
169 Ga0373943_0183367 3300035170 Bacteria 1151
170 Ga0373946_0089685 3300035171 Bacteria 1360
171 Ga0373937_0079746 3300036401 Bacteria 3026
172 Ga0436360_0759706 3300039438 Bacteria 11674
173 Ga0436360_0814496 3300039438 Bacteria 4219
174 Ga0436361_0934083 3300039447 Bacteria 655
175 Ga0436362_0537217 3300039453 Bacteria 1359
176 Ga0451853_0124235 3300041512 Bacteria 2053
177 Ga0439448_0078570 3300042005 Bacteria 1106
178 Ga0439463_129081 3300042016 Bacteria 654
179 Ga0439459_0149009 3300042438 Bacteria 610
180 Ga0466965_0003049 3300044683 Bacteria 7292
181 Ga0453684_0336758 3300044712 Bacteria 1705
182 Ga0466960_0005348 3300044901 Bacteria 5081
183 Ga0495629_0076951 3300046459 Bacteria 2329
184 Ga0495594_0148584 3300046499 Bacteria 1330
185 Ga0495630_0071010 3300046517 Bacteria 2620
186 Ga0495581_0513604 3300047315 Bacteria 696
187 Ga0496104_0043992 3300048907 Bacteria 4195
188 Ga0496105_0005806 3300048908 Bacteria 9412
189 Ga0496108_0010556 3300048911 Bacteria 7499
190 Ga0496108_0303369 3300048911 Bacteria 1391
191 Ga0496109_0007898 3300048912 Bacteria 9017
192 Ga0496111_0024271 3300048914 Bacteria 4267
193 Ga0496112_0021883 3300048915 Bacteria 6085
194 Ga0496112_0039619 3300048915 Bacteria 4605
195 Ga0496113_0003070 3300048916 Bacteria 9911
196 Ga0496113_0401223 3300048916 Bacteria 1101
197 Ga0501031_0460834 3300049568 Bacteria 821
198 Ga0501036_0796555 3300049572 Bacteria 778
199 Ga0501040_0213316 3300049576 Bacteria 1373
200 Ga0501042_0206967 3300049578 Bacteria 1415
201 Ga0501046_0476033 3300049580 Bacteria 896
202 Ga0501047_0073045 3300049581 Bacteria 3302
203 Ga0501074_0058695 3300049590 Bacteria 2772
204 Ga0501074_0607591 3300049590 Bacteria 773
205 Ga0501044_0194251 3300049823 Bacteria 1990
206 Ga0501044_0335669 3300049823 Bacteria 1433
207 nmdc:mga05p37_1048074_c1 3300050507 Bacteria 860
208 nmdc:mga05p37_123751_c1 3300050507 Bacteria 3177
209 nmdc:mga05p37_220124_c1 3300050507 Bacteria 2291
210 nmdc:mga09592_136268_c1 3300050508 Bacteria 2115
211 nmdc:mga0qj67_2301_c1 3300050509 Bacteria 13583
212 nmdc:mga06r32_102318_c1 3300050510 Bacteria 2812
213 nmdc:mga08y16_23550_c1 3300050511 Bacteria 6505
214 Ga0500646_0022392 3300053090 Bacteria 1690
215 Ga0500583_0022402 3300053092 Bacteria 2646
216 Ga0500641_0084682 3300053096 Bacteria 1349
217 Ga0500588_0001079 3300053146 Bacteria 4965
218 Ga0501084_0547599 3300054114 Bacteria 978
219 Ga0530510_0100300 3300061734 Bacteria 2117
220 2917742047 2917736166 Bacteria 9690793
221 Ga0500646_0000312
222 JGI25406J46586_10084960
223 Ga0070658_10062751
224 Ga0070683_100005205
225 Ga0068869_100023360
226 Ga0070680_100237052
227 Ga0068868_100170552
228 Ga0070660_100041980
229 Ga0070660_100449496
230 Ga0070689_100289080
231 Ga0070687_100054803
232 Ga0070661_100010604
233 Ga0070661_100042524
234 Ga0070668_100275320
235 Ga0070669_100055937
236 Ga0070659_100216800
237 Ga0070709_10033519
238 Ga0070714_100161612
239 Ga0070711_100429579
240 Ga0070700_100010570
241 Ga0070663_100005664
242 Ga0070662_100004579
243 Ga0070681_10126956
244 Ga0070679_100140351
245 Ga0070684_100007006
246 Ga0070684_100205448
247 Ga0070684_100248703
248 Ga0070684_100450579
249 Ga0070693_100161790
250 Ga0070664_100010653
251 Ga0070664_100154530
252 Ga0070664_100184807
253 Ga0070664_100222655
254 Ga0068857_100010602
255 Ga0068857_100023508
256 Ga0068857_100056511
257 Ga0068857_100581581
258 Ga0068857_100733568
259 Ga0068854_100135661
260 Ga0068856_100146883
261 Ga0068856_101087487
262 Ga0068852_100057524
263 Ga0068859_100527995
264 Ga0068864_100007621
265 Ga0068864_100063746
266 Ga0068863_100017970
267 Ga0068858_100044386
268 Ga0068860_100361055
269 Ga0081455_10000005
270 Ga0081540_1002117
271 Ga0081539_10000632
272 Ga0070716_100444140
273 Ga0075428_100317214
274 Ga0075430_100002093
275 Ga0075430_100183876
276 Ga0075431_100216862
277 Ga0075429_100129377
278 Ga0075429_100590665
279 Ga0097620_100528000
280 Ga0111539_10007578
281 Ga0105245_10087003
282 Ga0114129_10004347
283 Ga0114129_10040539
284 Ga0114129_10985881
285 Ga0105243_10230271
286 Ga0105242_10274209
287 Ga0105248_10001351
288 Ga0105248_10089729
289 Ga0105237_11462351
290 Ga0105249_10565466
291 Ga0105246_10127679
292 Ga0157369_10078334
293 Ga0157374_11390804
294 Ga0163163_10001919
295 Ga0163163_10185751
296 Ga0163163_10712451
297 Ga0157377_10511026
298 Ga0157379_10146039
299 Ga0157379_10415810
300 Ga0157379_10467465
301 Ga0163161_10941078
302 Ga0197907_10053010
303 Ga0206356_10048116
304 Ga0206350_10405404
305 Ga0206353_11143074
306 Ga0213871_10027102
307 Ga0224712_10005892
308 Ga0207692_10014089
309 Ga0207645_10313958
310 Ga0207643_10186215
311 Ga0207705_10209781
312 Ga0207684_10322873
313 Ga0207707_10530552
314 Ga0207693_10132470
315 Ga0207662_10033119
316 Ga0207657_10049173
317 Ga0207657_10136158
318 Ga0207649_10124931
319 Ga0207649_10263448
320 Ga0207681_10018392
321 Ga0207650_10350798
322 Ga0207659_10029495
323 Ga0207687_10072624
324 Ga0207700_10102705
325 Ga0207664_10282701
326 Ga0207690_10085235
327 Ga0207706_10004676
328 Ga0207709_10209503
329 Ga0207670_10892774
330 Ga0207704_10288375
331 Ga0207665_10551505
332 Ga0207711_10005878
333 Ga0207689_10031359
334 Ga0207661_10007055
335 Ga0207661_10051227
336 Ga0207661_10134610
337 Ga0207679_10095126
338 Ga0207679_10119130
339 Ga0207679_10131863
340 Ga0207712_10262989
341 Ga0207668_10235271
342 Ga0207640_10098080
343 Ga0207677_10189829
344 Ga0207703_10235781
345 Ga0207678_10012913
346 Ga0207702_10173330
347 Ga0207641_10025487
348 Ga0207676_10010215
349 Ga0207674_10016171
350 Ga0207674_10065009
351 Ga0207674_10151275
352 Ga0207674_10436874
353 Ga0207698_10011112
354 Ga0207428_10189881
355 Ga0268265_10075321
356 Ga0268264_10605011
357 Ga0307515_10257702
358 Ga0316176_1195499
359 Ga0314311_1008904
360 Ga0316181_1148784
361 Ga0307408_100065541
362 Ga0307408_100622154
363 Ga0307508_10042587
364 Ga0307405_10004350
365 Ga0307405_10332264
366 Ga0307410_10011025
367 Ga0307410_10576787
368 Ga0326468_10000969
369 Ga0307406_10004032
370 Ga0307406_10118713
371 Ga0307406_10154225
372 Ga0307406_10452713
373 Ga0307407_10184769
374 Ga0307412_10012576
375 Ga0307412_10133953
376 Ga0307409_100000412
377 Ga0307409_100012228
378 Ga0307409_100040048
379 Ga0307409_100555897
380 Ga0307416_100000798
381 Ga0307416_101584245
382 Ga0307415_100000018
383 Ga0307415_100004426
384 Ga0307415_100058637
385 Ga0307415_100106023
386 Ga0307415_100528294
387 Ga0307507_10143899
388 Ga0373953_0044057
389 Ga0373943_0183367
390 Ga0373946_0089685
391 Ga0373937_0079746
392 Ga0436360_0759706
393 Ga0436360_0814496
394 Ga0436361_0934083
395 Ga0436362_0537217
396 Ga0451853_0124235
397 Ga0439448_0078570
398 Ga0439463_129081
399 Ga0439459_0149009
400 Ga0466965_0003049
401 Ga0453684_0336758
402 Ga0466960_0005348
403 Ga0495629_0076951
404 Ga0495594_0148584
405 Ga0495630_0071010
406 Ga0495581_0513604
407 Ga0496104_0043992
408 Ga0496105_0005806
409 Ga0496108_0010556
410 Ga0496108_0303369
411 Ga0496109_0007898
412 Ga0496111_0024271
413 Ga0496112_0021883
414 Ga0496112_0039619
415 Ga0496113_0003070
416 Ga0496113_0401223
417 Ga0501031_0460834
418 Ga0501036_0796555
419 Ga0501040_0213316
420 Ga0501042_0206967
421 Ga0501046_0476033
422 Ga0501047_0073045
423 Ga0501074_0058695
424 Ga0501074_0607591
425 Ga0501044_0194251
426 Ga0501044_0335669
427 nmdc:mga05p37_1048074_c1
428 nmdc:mga05p37_123751_c1
429 nmdc:mga05p37_220124_c1
430 nmdc:mga09592_136268_c1
431 nmdc:mga0qj67_2301_c1
432 nmdc:mga06r32_102318_c1
433 nmdc:mga08y16_23550_c1
434 Ga0500646_0022392
435 Ga0500583_0022402
436 Ga0500641_0084682
437 Ga0500588_0001079
438 Ga0501084_0547599
439 Ga0530510_0100300
440 2917742047

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01923

Cob_adeno_trans

Cobalamin adenosyltransferase

8

176

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
2g2d-assembly1.cif.gz_A crystal structure of a putative pduo-type atp:cobalamin adenosyltransferase from mycobacterium tuberculosis 0.9722 29 188
2g2d-assembly1.cif.gz_A crystal structure of a putative pduo-type atp:cobalamin adenosyltransferase from mycobacterium tuberculosis 0.9662 29 188
8d32-assembly1.cif.gz_A mycobacterium tuberculosis pduo-type atp:cobalamin adenosyltransferase bound to 5-deoxyadenosylrhodibalamin and pppi 0.9638 3 188
8d32-assembly1.cif.gz_A mycobacterium tuberculosis pduo-type atp:cobalamin adenosyltransferase bound to 5-deoxyadenosylrhodibalamin and pppi 0.9588 3 188
6wgs-assembly1.cif.gz_A mycobacterium tuberculosis pduo-type atp:cobalamin adenosyltransferase bound to adenosylcobalamin 0.9539 13 188
ID Description Score Start End Superfamily
2g2dA00 Mainly Alpha;Up-down Bundle;Hypothetical Protein Ta1238; Chain: A;;Cobalamin adenosyltransferase-like 0.9722 29 188 1.20.1200.10
2g2dA00 Mainly Alpha;Up-down Bundle;Hypothetical Protein Ta1238; Chain: A;;Cobalamin adenosyltransferase-like 0.9662 29 188 1.20.1200.10
2zhzB01 Mainly Alpha;Up-down Bundle;Hypothetical Protein Ta1238; Chain: A;;Cobalamin adenosyltransferase-like 0.9351 18 185 1.20.1200.10
5cy5A00 Mainly Alpha;Up-down Bundle;Hypothetical Protein Ta1238; Chain: A;;Cobalamin adenosyltransferase-like 0.9334 30 175 1.20.1200.10
2zhzB01 Mainly Alpha;Up-down Bundle;Hypothetical Protein Ta1238; Chain: A;;Cobalamin adenosyltransferase-like 0.9239 18 185 1.20.1200.10
ID Description Score Start End GO Terms
AF-A0A543E082-F1-model_v4 Corrinoid adenosyltransferase (EC 2.5.1.17) (Cob(II)alamin adenosyltransferase) (Cob(II)yrinic acid a,c-diamide adenosyltransferase) (Cobinamide/cobalamin adenosyltransferase) 0.9701 1 188 GO:0005524
GO:0008817
GO:0009236
AF-A0A1V1W926-F1-model_v4 Corrinoid adenosyltransferase (EC 2.5.1.17) (Cob(II)alamin adenosyltransferase) (Cob(II)yrinic acid a,c-diamide adenosyltransferase) (Cobinamide/cobalamin adenosyltransferase) 0.9693 3 188 GO:0005524
GO:0008817
GO:0009236
AF-A0A4R4TTE6-F1-model_v4 Corrinoid adenosyltransferase (EC 2.5.1.17) (Cob(II)alamin adenosyltransferase) (Cob(II)yrinic acid a,c-diamide adenosyltransferase) (Cobinamide/cobalamin adenosyltransferase) 0.9691 3 151 GO:0005524
GO:0008817
GO:0009236
AF-A0A1J5PK13-F1-model_v4 Cob(I)yrinic acid a,c-diamide adenosyltransferase (EC 2.5.1.17) 0.9689 26 189 GO:0005524
GO:0008817
AF-A0A1Q8LIF1-F1-model_v4 Corrinoid adenosyltransferase (EC 2.5.1.17) (Cob(II)alamin adenosyltransferase) (Cob(II)yrinic acid a,c-diamide adenosyltransferase) (Cobinamide/cobalamin adenosyltransferase) 0.9685 1 188 GO:0005524
GO:0008817
GO:0009236

Map