F332683

General Info

Members Datasets Scaffolds Average Seq Length
220 127 218 283

Family's Representative Sequence

Representative Sequence 3300049127|Ga0501306_002346|Ga0501306_002346_781_1653
Length 290
Sequence MRRSQFLKFTLGGLAMTTLNSFKNFTDDLQKQDYMMPVLFIGHGSPMNGIEDNEFSNRWKKLAKEIPVPKAVVVVSAHWLTRGTRITSMNFPKTIHDFSGFPKELFNVQYNAPGSPSLAVETKALVHSTDVELDHDWGLDHGTWTIIRHMYPEANIPVLQLSIDYTKGPKYHYELAKELTELRKKGILLVGSGNMVHNLKMISWEMIEGGGYDWANSMNDKFKNLISEHNHEALIHYSQLGREATLAIPTPEHYLPLLYTLGLQNKQEDVSFFNDKAVGGSLTMTSVKIG

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2738541278 Niastella sp. CF465 Isolate Unclassified
3 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
4 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
5 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
6 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
7 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
8 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
9 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
10 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
11 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
12 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
13 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
14 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
15 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
16 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
17 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
18 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
19 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
20 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
21 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
22 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
23 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
24 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
25 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
26 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
27 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
28 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
29 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
30 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
31 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
32 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
37 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
38 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
39 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
40 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
41 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
42 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
43 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
44 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
45 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
46 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
47 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
48 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
49 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
50 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
51 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
52 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
54 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
55 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
57 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
72 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
73 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
74 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
75 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
76 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
77 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
78 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
79 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
80 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
81 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
82 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
83 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
84 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
85 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
86 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
87 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
88 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
89 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
90 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
91 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
92 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
93 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
94 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
95 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
96 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
97 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
98 3300049127 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
99 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
102 3300049651 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_A_0_drought Metagenome Rhizosphere
103 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
104 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
105 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
106 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
107 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
108 3300049680 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I13_B_3_drought Metagenome Rhizosphere
109 3300049682 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_B_3_drought Metagenome Rhizosphere
110 3300049683 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_B_3_control Metagenome Rhizosphere
111 3300049684 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_B_3_control Metagenome Rhizosphere
112 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
113 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
114 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
115 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
116 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
117 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
118 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
119 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
120 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
121 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049851 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_B_0_drought Metagenome Rhizosphere
124 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
125 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
126 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
127 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.73
Metatranscriptomes 0.91
Isolates 1.36

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.64
Nodule 0
Rhizoplane 0
Rhizosphere 75.91
Stem 0
Stem Tuber 0
Unclassified 10.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_833367 2162886007 Bacteria 3317
2 JGI24740J21852_10009907 3300001979 Bacteria 3699
3 JGI25154J39366_1000076 3300002738 Bacteria 91215
4 JGI25157J39369_1004808 3300002741 Bacteria 2347
5 JGI25153J46596_10000766 3300003215 Bacteria 19670
6 JGI25153J46596_10022307 3300003215 Bacteria 2338
7 JGI25153J46596_10038179 3300003215 Unclassified 1517
8 rootH1_10013978 3300003316 Bacteria 13495
9 rootH1_10013978 3300003323 Bacteria 5217
10 rootH1_10015819 3300003316 Bacteria 1585
11 rootH1_10059383 3300003316 Bacteria 9660
12 rootH2_10059233 3300003320 Bacteria 6355
13 rootH2_10193611 3300003320 Bacteria 2140
14 rootL2_10109149 3300003322 Bacteria 7356
15 rootL2_10209265 3300003322 Bacteria 1729
16 rootL2_10317498 3300003322 Bacteria 1360
17 rootH1_10000759 3300003323 Bacteria 51501
18 rootH1_10068010 3300003323 Bacteria 13848
19 rootH1_10070430 3300003323 Bacteria 6976
20 rootH1_10091623 3300003323 Bacteria 4703
21 JGI25160J50197_1003069 3300003354 Bacteria 7616
22 Ga0055526_1006439 3300003771 Bacteria 6368
23 Ga0055526_1037895 3300003771 Bacteria 1251
24 Ga0055528_1000985 3300003790 Bacteria 18904
25 Ga0055530_10004188 3300003791 Bacteria 7599
26 Ga0055531_10006029 3300003794 Bacteria 6954
27 Ga0055531_10025926 3300003794 Bacteria 2109
28 Ga0058863_10136784 3300004799 Bacteria 2997
29 Ga0065165_1000219 3300005262 Bacteria 100119
30 Ga0065165_1000783 3300005262 Bacteria 42648
31 Ga0065165_1014310 3300005262 Bacteria 3089
32 Ga0065704_10074887 3300005289 Bacteria 5939
33 Ga0070658_10245510 3300005327 Bacteria 1518
34 Ga0070658_10357563 3300005327 Bacteria 1250
35 Ga0070658_10569402 3300005327 Unclassified 981
36 Ga0070683_100114807 3300005329 Unclassified 2542
37 Ga0070683_100123654 3300005329 Bacteria 2445
38 Ga0070666_10226629 3300005335 Bacteria 1319
39 Ga0070680_100030447 3300005336 Bacteria 4335
40 Ga0070660_100032846 3300005339 Bacteria 3909
41 Ga0070660_100290675 3300005339 Bacteria 1338
42 Ga0070675_100324721 3300005354 Bacteria 1360
43 Ga0070659_100011161 3300005366 Bacteria 6637
44 Ga0070659_100044483 3300005366 Bacteria 3476
45 Ga0070659_100170215 3300005366 Bacteria 1784
46 Ga0070659_100179312 3300005366 Bacteria 1738
47 Ga0070681_10144433 3300005458 Bacteria 2309
48 Ga0070679_100178443 3300005530 Bacteria 2097
49 Ga0070679_100277621 3300005530 Bacteria 1628
50 Ga0070684_100000834 3300005535 Bacteria 21649
51 Ga0070697_100215892 3300005536 Bacteria 1634
52 Ga0068853_100028008 3300005539 Bacteria 4739
53 Ga0068853_100624458 3300005539 Bacteria 1024
54 Ga0070693_100217723 3300005547 Bacteria 1249
55 Ga0068855_100007169 3300005563 Bacteria 13525
56 Ga0068855_100007528 3300005563 Bacteria 13178
57 Ga0070664_100002736 3300005564 Bacteria 14233
58 Ga0068857_100407943 3300005577 Bacteria 1265
59 Ga0070716_100043994 3300006173 Bacteria 2500
60 Ga0075366_10258909 3300006195 Bacteria 1062
61 Ga0157373_10003337 3300013100 Bacteria 12128
62 Ga0157373_10013071 3300013100 Bacteria 6091
63 Ga0157373_10050561 3300013100 Bacteria 2960
64 Ga0157371_10000584 3300013102 Bacteria 43265
65 Ga0157371_10001101 3300013102 Bacteria 29303
66 Ga0157371_10003314 3300013102 Bacteria 14722
67 Ga0157371_10005044 3300013102 Bacteria 11291
68 Ga0157371_10007926 3300013102 Bacteria 8522
69 Ga0157371_10011628 3300013102 Bacteria 6766
70 Ga0157371_10011824 3300013102 Bacteria 6703
71 Ga0157371_10017556 3300013102 Bacteria 5313
72 Ga0157371_10022603 3300013102 Bacteria 4604
73 Ga0157371_10038802 3300013102 Bacteria 3407
74 Ga0157371_10087629 3300013102 Bacteria 2204
75 Ga0157370_10001675 3300013104 Bacteria 27295
76 Ga0157370_10155354 3300013104 Bacteria 2128
77 Ga0157370_10283377 3300013104 Bacteria 1531
78 Ga0157369_10075505 3300013105 Bacteria 3614
79 Ga0157369_10096699 3300013105 Unclassified 3150
80 Ga0157369_10137196 3300013105 Bacteria 2589
81 Ga0157374_10094635 3300013296 Bacteria 2855
82 Ga0157374_10356139 3300013296 Bacteria 1455
83 Ga0157378_10253390 3300013297 Bacteria 1686
84 Ga0163162_10644740 3300013306 Bacteria 1183
85 Ga0157372_10017697 3300013307 Bacteria 7649
86 Ga0157372_10027898 3300013307 Bacteria 6154
87 Ga0157372_10040696 3300013307 Bacteria 5134
88 Ga0157372_10051256 3300013307 Bacteria 4592
89 Ga0157372_10084426 3300013307 Bacteria 3599
90 Ga0157372_10114548 3300013307 Bacteria 3091
91 Ga0157372_10121933 3300013307 Bacteria 2995
92 Ga0157372_10141232 3300013307 Unclassified 2774
93 Ga0157372_10397521 3300013307 Bacteria 1606
94 Ga0157372_10437952 3300013307 Bacteria 1523
95 Ga0157375_10213231 3300013308 Bacteria 2089
96 Ga0182008_10000025 3300014497 Bacteria 191222
97 Ga0157376_10486508 3300014969 Bacteria 1210
98 Ga0209646_1000003 3300025246 Bacteria 1160860
99 Ga0209646_1002133 3300025246 Bacteria 4593
100 Ga0209026_1000614 3300025250 Bacteria 22834
101 Ga0209129_1011613 3300025258 Bacteria 2091
102 Ga0209673_1000973 3300025273 Bacteria 35383
103 Ga0209564_1003078 3300025295 Bacteria 11823
104 Ga0209564_1043742 3300025295 Bacteria 1171
105 Ga0209758_1002110 3300025297 Bacteria 21061
106 Ga0209758_1010152 3300025297 Bacteria 5693
107 Ga0209758_1032430 3300025297 Bacteria 2120
108 Ga0209050_1000830 3300025298 Bacteria 42814
109 Ga0207426_1000187 3300025302 Bacteria 153809
110 Ga0207426_1007416 3300025302 Bacteria 4599
111 Ga0209257_1000008 3300025304 Bacteria 1294570
112 Ga0209257_1015063 3300025304 Bacteria 3254
113 Ga0207647_10004424 3300025904 Bacteria 10416
114 Ga0207705_10028050 3300025909 Bacteria 4014
115 Ga0207705_10054524 3300025909 Bacteria 2881
116 Ga0207705_10387824 3300025909 Bacteria 1079
117 Ga0207660_10262813 3300025917 Bacteria 1365
118 Ga0207657_10089914 3300025919 Bacteria 2563
119 Ga0207657_10309232 3300025919 Bacteria 1251
120 Ga0207649_10096292 3300025920 Bacteria 1949
121 Ga0207652_10020372 3300025921 Bacteria 5460
122 Ga0207652_10191616 3300025921 Bacteria 1839
123 Ga0207659_10319191 3300025926 Bacteria 1281
124 Ga0207664_10418832 3300025929 Bacteria 1193
125 Ga0207690_10061644 3300025932 Bacteria 2550
126 Ga0207686_10159634 3300025934 Bacteria 1579
127 Ga0207679_10001615 3300025945 Bacteria 14039
128 Ga0207674_10002403 3300026116 Bacteria 23617
129 Ga0207698_10116008 3300026142 Bacteria 2256
130 Ga0207698_10149138 3300026142 Unclassified 2027
131 Ga0307515_10000001 3300028794 Bacteria 4259510
132 Ga0307515_10001200 3300028794 Bacteria 59235
133 Ga0307511_10000680 3300030521 Bacteria 36246
134 Ga0307408_100000650 3300031548 Bacteria 29170
135 Ga0307408_100001238 3300031548 Bacteria 19167
136 Ga0307405_10000002 3300031731 Bacteria 575196
137 Ga0307413_10205537 3300031824 Bacteria 1426
138 Ga0307406_10006573 3300031901 Bacteria 6425
139 Ga0307414_10007596 3300032004 Bacteria 6099
140 Ga0307414_10149575 3300032004 Bacteria 1840
141 Ga0307414_10151487 3300032004 Unclassified 1830
142 Ga0307414_10328436 3300032004 Unclassified 1305
143 Ga0307411_10186115 3300032005 Bacteria 1581
144 Ga0316583_10014709 3300032133 Bacteria 2818
145 Ga0316585_10013599 3300032137 Bacteria 2424
146 Ga0316580_10024780 3300032139 Bacteria 1854
147 Ga0316582_0185931 3300036647 Bacteria 1414
148 Ga0395899_0006271 3300037312 Bacteria 9204
149 Ga0395899_0022562 3300037312 Bacteria 4769
150 Ga0395900_0040037 3300037418 Bacteria 4829
151 Ga0395900_0074263 3300037418 Bacteria 3496
152 Ga0395900_0154699 3300037418 Bacteria 2342
153 Ga0395900_0512276 3300037418 Unclassified 1149
154 Ga0395898_0004173 3300037466 Bacteria 15834
155 Ga0395898_0201043 3300037466 Bacteria 1902
156 Ga0395905_0000527 3300037471 Bacteria 52435
157 Ga0395905_0251808 3300037471 Bacteria 1650
158 Ga0395901_0003994 3300038443 Bacteria 14853
159 Ga0395901_0106705 3300038443 Bacteria 2939
160 Ga0395901_0371832 3300038443 Bacteria 1472
161 Ga0395901_0748690 3300038443 Bacteria 970
162 Ga0439449_0002155 3300042007 Bacteria 7733
163 Ga0439457_000928 3300042014 Bacteria 8805
164 Ga0439457_003498 3300042014 Bacteria 4266
165 Ga0451577_0519662 3300042876 Bacteria 1081
166 Ga0466972_0000015 3300044658 Bacteria 210687
167 Ga0466972_0019806 3300044658 Bacteria 3364
168 Ga0466972_0033297 3300044658 Bacteria 2528
169 Ga0453683_0328059 3300044673 Bacteria 981
170 Ga0453684_0002639 3300044712 Bacteria 42845
171 Ga0453684_0048448 3300044712 Bacteria 5619
172 Ga0453684_0077293 3300044712 Bacteria 4174
173 Ga0453684_0103596 3300044712 Bacteria 3476
174 Ga0453684_0223192 3300044712 Bacteria 2181
175 Ga0466957_0002689 3300044842 Bacteria 9609
176 Ga0466959_0236537 3300045049 Bacteria 1263
177 Ga0451576_0276742 3300045051 Bacteria 1755
178 Ga0451576_0305848 3300045051 Unclassified 1663
179 Ga0451576_0727937 3300045051 Bacteria 1042
180 Ga0495668_0002355 3300046616 Bacteria 15721
181 Ga0501306_002346 3300049127 Bacteria 1930
182 Ga0501034_0000007 3300049571 Bacteria 357805
183 Ga0501034_0080473 3300049571 Bacteria 3261
184 Ga0501047_0115246 3300049581 Bacteria 2569
185 Ga0501198_015158 3300049649 Bacteria 1181
186 Ga0501201_001195 3300049651 Bacteria 2434
187 Ga0501207_002483 3300049654 Bacteria 2386
188 Ga0501222_004750 3300049662 Bacteria 1847
189 Ga0501223_000445 3300049663 Bacteria 9968
190 Ga0501235_008241 3300049669 Bacteria 2274
191 Ga0501235_023756 3300049669 Bacteria 1368
192 Ga0501243_001129 3300049675 Bacteria 3788
193 Ga0501250_000339 3300049680 Bacteria 2995
194 Ga0501252_002201 3300049682 Bacteria 1913
195 Ga0501252_009748 3300049682 Bacteria 1125
196 Ga0501253_003134 3300049683 Bacteria 1948
197 Ga0501253_017555 3300049683 Unclassified 1209
198 Ga0501255_012220 3300049684 Bacteria 1003
199 Ga0501257_006617 3300049686 Bacteria 2573
200 Ga0501257_011274 3300049686 Bacteria 2039
201 Ga0501259_001970 3300049688 Bacteria 3397
202 Ga0501259_002753 3300049688 Bacteria 2822
203 Ga0501261_001329 3300049690 Bacteria 3028
204 Ga0501221_004789 3300049704 Bacteria 2249
205 Ga0501225_0000513 3300049705 Bacteria 12088
206 Ga0501225_0021103 3300049705 Bacteria 1799
207 Ga0501234_001641 3300049707 Bacteria 3504
208 Ga0501234_020191 3300049707 Bacteria 1059
209 Ga0501241_001740 3300049758 Bacteria 4326
210 Ga0501266_005585 3300049763 Unclassified 1563
211 Ga0501280_009661 3300049776 Bacteria 1342
212 Ga0501035_0250575 3300049822 Bacteria 1504
213 Ga0501044_0263845 3300049823 Bacteria 1660
214 Ga0501212_000485 3300049851 Bacteria 3878
215 Ga0500578_0000066 3300053086 Bacteria 116854
216 Ga0500578_0009036 3300053086 Bacteria 6491
217 Ga0500658_0116788 3300053134 Bacteria 1180
218 Ga0500622_0003157 3300053156 Bacteria 11268

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005536 Ga0070697_100215892 Ga0070697_1002158922 253
2 3300006173 Ga0070716_100043994 Ga0070716_1000439942 253
3 3300025246 Ga0209646_1002133 Ga0209646_10021333 274
4 3300014497 Ga0182008_10000025 Ga0182008_1000002563 275
5 3300031548 Ga0307408_100000650 Ga0307408_10000065025 275
6 3300031548 Ga0307408_100001238 Ga0307408_10000123810 275
7 3300032004 Ga0307414_10007596 Ga0307414_100075965 275
8 3300032004 Ga0307414_10328436 Ga0307414_103284362 275
9 3300032133 Ga0316583_10014709 Ga0316583_100147093 275
10 3300032137 Ga0316585_10013599 Ga0316585_100135992 275
11 3300032139 Ga0316580_10024780 Ga0316580_100247803 275
12 3300036647 Ga0316582_0185931 Ga0316582_0185931_206_1039 275
13 3300042876 Ga0451577_0519662 Ga0451577_0519662_167_994 275
14 3300044712 Ga0453684_0103596 Ga0453684_0103596_249_1076 275
15 3300003322 rootL2_10109149 rootL2_101091493 276
16 3300005547 Ga0070693_100217723 Ga0070693_1002177232 276
17 3300037471 Ga0395905_0000527 Ga0395905_0000527_30365_31195 276
18 3300046616 Ga0495668_0002355 Ga0495668_0002355_14344_15174 276
19 3300049707 Ga0501234_020191 Ga0501234_020191_192_1022 276
20 3300053156 Ga0500622_0003157 Ga0500622_0003157_2548_3378 276
21 3300001979 JGI24740J21852_10009907 JGI24740J21852_100099074 277
22 3300002738 JGI25154J39366_1000076 JGI25154J39366_100007677 277
23 3300002741 JGI25157J39369_1004808 JGI25157J39369_10048082 277
24 3300003215 JGI25153J46596_10000766 JGI25153J46596_100007665 277
25 3300003215 JGI25153J46596_10022307 JGI25153J46596_100223073 277
26 3300003215 JGI25153J46596_10038179 JGI25153J46596_100381792 277
27 3300003316 rootH1_10013978 rootH1_100139783 277
28 3300003316 rootH1_10015819 rootH1_100158191 277
29 3300003320 rootH2_10059233 rootH2_100592336 277
30 3300003320 rootH2_10193611 rootH2_101936113 277
31 3300003322 rootL2_10209265 rootL2_102092652 277
32 3300003322 rootL2_10317498 rootL2_103174982 277
33 3300003323 rootH1_10000759 rootH1_100007595 277
34 3300003323 rootH1_10068010 rootH1_100680108 277
35 3300003323 rootH1_10070430 rootH1_1007043010 277
36 3300003323 rootH1_10091623 rootH1_100916234 277
37 3300003354 JGI25160J50197_1003069 JGI25160J50197_10030693 277
38 3300003771 Ga0055526_1006439 Ga0055526_10064395 277
39 3300003771 Ga0055526_1037895 Ga0055526_10378951 277
40 3300003790 Ga0055528_1000985 Ga0055528_10009855 277
41 3300003791 Ga0055530_10004188 Ga0055530_100041884 277
42 3300003794 Ga0055531_10025926 Ga0055531_100259263 277
43 3300004799 Ga0058863_10136784 Ga0058863_101367843 277
44 3300005262 Ga0065165_1000219 Ga0065165_100021961 277
45 3300005262 Ga0065165_1014310 Ga0065165_10143103 277
46 3300005327 Ga0070658_10245510 Ga0070658_102455102 277
47 3300005327 Ga0070658_10357563 Ga0070658_103575632 277
48 3300005327 Ga0070658_10569402 Ga0070658_105694021 277
49 3300005329 Ga0070683_100114807 Ga0070683_1001148071 277
50 3300005335 Ga0070666_10226629 Ga0070666_102266292 277
51 3300005339 Ga0070660_100290675 Ga0070660_1002906752 277
52 3300005366 Ga0070659_100011161 Ga0070659_1000111612 277
53 3300005366 Ga0070659_100044483 Ga0070659_1000444832 277
54 3300005366 Ga0070659_100170215 Ga0070659_1001702152 277
55 3300005366 Ga0070659_100179312 Ga0070659_1001793122 277
56 3300005458 Ga0070681_10144433 Ga0070681_101444332 277
57 3300005530 Ga0070679_100178443 Ga0070679_1001784432 277
58 3300005530 Ga0070679_100277621 Ga0070679_1002776212 277
59 3300005535 Ga0070684_100000834 Ga0070684_10000083410 277
60 3300005539 Ga0068853_100028008 Ga0068853_1000280084 277
61 3300005539 Ga0068853_100624458 Ga0068853_1006244581 277
62 3300005563 Ga0068855_100007528 Ga0068855_10000752812 277
63 3300005564 Ga0070664_100002736 Ga0070664_1000027364 277
64 3300005577 Ga0068857_100407943 Ga0068857_1004079432 277
65 3300006195 Ga0075366_10258909 Ga0075366_102589092 277
66 3300013100 Ga0157373_10003337 Ga0157373_100033372 277
67 3300013100 Ga0157373_10013071 Ga0157373_100130716 277
68 3300013100 Ga0157373_10050561 Ga0157373_100505614 277
69 3300013102 Ga0157371_10000584 Ga0157371_1000058414 277
70 3300013102 Ga0157371_10001101 Ga0157371_100011018 277
71 3300013102 Ga0157371_10003314 Ga0157371_1000331415 277
72 3300013102 Ga0157371_10005044 Ga0157371_100050449 277
73 3300013102 Ga0157371_10011824 Ga0157371_100118243 277
74 3300013102 Ga0157371_10017556 Ga0157371_100175566 277
75 3300013102 Ga0157371_10022603 Ga0157371_100226036 277
76 3300013102 Ga0157371_10038802 Ga0157371_100388024 277
77 3300013102 Ga0157371_10087629 Ga0157371_100876292 277
78 3300013104 Ga0157370_10001675 Ga0157370_100016753 277
79 3300013104 Ga0157370_10155354 Ga0157370_101553544 277
80 3300013104 Ga0157370_10283377 Ga0157370_102833772 277
81 3300013105 Ga0157369_10075505 Ga0157369_100755053 277
82 3300013105 Ga0157369_10137196 Ga0157369_101371963 277
83 3300013307 Ga0157372_10017697 Ga0157372_100176974 277
84 3300013307 Ga0157372_10027898 Ga0157372_100278986 277
85 3300013307 Ga0157372_10040696 Ga0157372_100406961 277
86 3300013307 Ga0157372_10051256 Ga0157372_100512563 277
87 3300013307 Ga0157372_10121933 Ga0157372_101219333 277
88 3300013307 Ga0157372_10437952 Ga0157372_104379522 277
89 3300025246 Ga0209646_1000003 Ga0209646_1000003275 277
90 3300025250 Ga0209026_1000614 Ga0209026_10006147 277
91 3300025258 Ga0209129_1011613 Ga0209129_10116131 277
92 3300025273 Ga0209673_1000973 Ga0209673_100097323 277
93 3300025295 Ga0209564_1003078 Ga0209564_10030785 277
94 3300025295 Ga0209564_1043742 Ga0209564_10437421 277
95 3300025297 Ga0209758_1002110 Ga0209758_100211010 277
96 3300025297 Ga0209758_1010152 Ga0209758_10101523 277
97 3300025297 Ga0209758_1032430 Ga0209758_10324303 277
98 3300025298 Ga0209050_1000830 Ga0209050_10008306 277
99 3300025302 Ga0207426_1007416 Ga0207426_10074163 277
100 3300025304 Ga0209257_1015063 Ga0209257_10150633 277
101 3300025904 Ga0207647_10004424 Ga0207647_100044244 277
102 3300025909 Ga0207705_10054524 Ga0207705_100545242 277
103 3300025909 Ga0207705_10387824 Ga0207705_103878242 277
104 3300025917 Ga0207660_10262813 Ga0207660_102628131 277
105 3300025919 Ga0207657_10089914 Ga0207657_100899142 277
106 3300025919 Ga0207657_10309232 Ga0207657_103092321 277
107 3300025920 Ga0207649_10096292 Ga0207649_100962923 277
108 3300025921 Ga0207652_10020372 Ga0207652_100203725 277
109 3300025921 Ga0207652_10191616 Ga0207652_101916161 277
110 3300025929 Ga0207664_10418832 Ga0207664_104188322 277
111 3300025932 Ga0207690_10061644 Ga0207690_100616444 277
112 3300025945 Ga0207679_10001615 Ga0207679_100016153 277
113 3300026116 Ga0207674_10002403 Ga0207674_100024038 277
114 3300026142 Ga0207698_10116008 Ga0207698_101160082 277
115 3300030521 Ga0307511_10000680 Ga0307511_100006806 277
116 3300031731 Ga0307405_10000002 Ga0307405_10000002401 277
117 3300031824 Ga0307413_10205537 Ga0307413_102055372 277
118 3300032004 Ga0307414_10149575 Ga0307414_101495752 277
119 3300032004 Ga0307414_10151487 Ga0307414_101514871 277
120 3300032005 Ga0307411_10186115 Ga0307411_101861152 277
121 3300037312 Ga0395899_0006271 Ga0395899_0006271_6123_6959 277
122 3300037312 Ga0395899_0022562 Ga0395899_0022562_1930_2784 277
123 3300037418 Ga0395900_0040037 Ga0395900_0040037_3953_4789 277
124 3300037418 Ga0395900_0074263 Ga0395900_0074263_670_1524 277
125 3300037418 Ga0395900_0154699 Ga0395900_0154699_205_1038 277
126 3300037418 Ga0395900_0512276 Ga0395900_0512276_21_857 277
127 3300037466 Ga0395898_0004173 Ga0395898_0004173_12749_13585 277
128 3300037466 Ga0395898_0201043 Ga0395898_0201043_699_1532 277
129 3300037471 Ga0395905_0251808 Ga0395905_0251808_208_1047 277
130 3300038443 Ga0395901_0003994 Ga0395901_0003994_1969_2814 277
131 3300038443 Ga0395901_0106705 Ga0395901_0106705_1713_2552 277
132 3300038443 Ga0395901_0371832 Ga0395901_0371832_578_1411 277
133 3300038443 Ga0395901_0748690 Ga0395901_0748690_65_919 277
134 3300044658 Ga0466972_0033297 Ga0466972_0033297_919_1752 277
135 3300044673 Ga0453683_0328059 Ga0453683_0328059_116_949 277
136 3300044712 Ga0453684_0002639 Ga0453684_0002639_2965_3798 277
137 3300044712 Ga0453684_0077293 Ga0453684_0077293_2509_3342 277
138 3300044842 Ga0466957_0002689 Ga0466957_0002689_1740_2573 277
139 3300045051 Ga0451576_0276742 Ga0451576_0276742_725_1558 277
140 3300045051 Ga0451576_0727937 Ga0451576_0727937_191_1027 277
141 3300049571 Ga0501034_0080473 Ga0501034_0080473_1460_2296 277
142 3300049649 Ga0501198_015158 Ga0501198_015158_36_869 277
143 3300049823 Ga0501044_0263845 Ga0501044_0263845_689_1522 277
144 3300045049 Ga0466959_0236537 Ga0466959_0236537_24_884 283
145 3300005336 Ga0070680_100030447 Ga0070680_1000304474 285
146 3300005563 Ga0068855_100007169 Ga0068855_1000071692 285
147 3300013102 Ga0157371_10007926 Ga0157371_100079267 286
148 iso_pu_bacteria 2738541278 2738728133 288
149 iso_pu_bacteria 2929921140 2929926457 288
150 iso_pu_bacteria 8003151029 8003156817 288
151 3300049127 Ga0501306_002346 Ga0501306_002346_781_1653 289
152 3300049686 Ga0501257_011274 Ga0501257_011274_298_1170 289
153 3300049669 Ga0501235_023756 Ga0501235_023756_319_1194 290
154 3300003316 rootH1_10059383 rootH1_100593836 291
155 3300003794 Ga0055531_10006029 Ga0055531_100060293 291
156 3300025304 Ga0209257_1000008 Ga0209257_1000008686 291
157 3300025909 Ga0207705_10028050 Ga0207705_100280505 291
158 3300025934 Ga0207686_10159634 Ga0207686_101596342 291
159 3300028794 Ga0307515_10001200 Ga0307515_1000120039 291
160 3300044712 Ga0453684_0048448 Ga0453684_0048448_4681_5565 291
161 3300045051 Ga0451576_0305848 Ga0451576_0305848_210_1094 291
162 3300049680 Ga0501250_000339 Ga0501250_000339_588_1466 291
163 3300049682 Ga0501252_009748 Ga0501252_009748_18_896 291
164 3300049683 Ga0501253_017555 Ga0501253_017555_303_1181 291
165 3300049688 Ga0501259_002753 Ga0501259_002753_1325_2203 291
166 3300049758 Ga0501241_001740 Ga0501241_001740_56_934 291
167 3300049763 Ga0501266_005585 Ga0501266_005585_278_1156 291
168 3300049822 Ga0501035_0250575 Ga0501035_0250575_289_1173 291
169 2162886007 SwRhRL2b_contig_833367 SwRhRL2b_0555.00002450 292
170 3300005262 Ga0065165_1000783 Ga0065165_100078338 292
171 3300005289 Ga0065704_10074887 Ga0065704_100748875 292
172 3300005329 Ga0070683_100123654 Ga0070683_1001236542 292
173 3300005339 Ga0070660_100032846 Ga0070660_1000328466 292
174 3300005354 Ga0070675_100324721 Ga0070675_1003247212 292
175 3300013102 Ga0157371_10011628 Ga0157371_100116283 292
176 3300013105 Ga0157369_10096699 Ga0157369_100966991 292
177 3300013296 Ga0157374_10094635 Ga0157374_100946352 292
178 3300013296 Ga0157374_10356139 Ga0157374_103561392 292
179 3300013297 Ga0157378_10253390 Ga0157378_102533902 292
180 3300013306 Ga0163162_10644740 Ga0163162_106447401 292
181 3300013307 Ga0157372_10084426 Ga0157372_100844263 292
182 3300013307 Ga0157372_10114548 Ga0157372_101145482 292
183 3300013307 Ga0157372_10141232 Ga0157372_101412322 292
184 3300013307 Ga0157372_10397521 Ga0157372_103975211 292
185 3300013308 Ga0157375_10213231 Ga0157375_102132312 292
186 3300014969 Ga0157376_10486508 Ga0157376_104865081 292
187 3300025302 Ga0207426_1000187 Ga0207426_100018710 292
188 3300025926 Ga0207659_10319191 Ga0207659_103191912 292
189 3300026142 Ga0207698_10149138 Ga0207698_101491382 292
190 3300028794 Ga0307515_10000001 Ga0307515_10000001749 292
191 3300031901 Ga0307406_10006573 Ga0307406_100065732 292
192 3300042007 Ga0439449_0002155 Ga0439449_0002155_4585_5475 292
193 3300042014 Ga0439457_000928 Ga0439457_000928_2238_3119 292
194 3300042014 Ga0439457_003498 Ga0439457_003498_730_1620 292
195 3300044658 Ga0466972_0000015 Ga0466972_0000015_192148_193029 292
196 3300044658 Ga0466972_0019806 Ga0466972_0019806_1016_1897 292
197 3300044712 Ga0453684_0223192 Ga0453684_0223192_399_1283 292
198 3300049571 Ga0501034_0000007 Ga0501034_0000007_326972_327853 292
199 3300049581 Ga0501047_0115246 Ga0501047_0115246_309_1328 292
200 3300049651 Ga0501201_001195 Ga0501201_001195_1350_2231 292
201 3300049654 Ga0501207_002483 Ga0501207_002483_1118_1999 292
202 3300049662 Ga0501222_004750 Ga0501222_004750_131_1012 292
203 3300049663 Ga0501223_000445 Ga0501223_000445_117_998 292
204 3300049669 Ga0501235_008241 Ga0501235_008241_1186_2067 292
205 3300049675 Ga0501243_001129 Ga0501243_001129_2158_3039 292
206 3300049682 Ga0501252_002201 Ga0501252_002201_388_1269 292
207 3300049683 Ga0501253_003134 Ga0501253_003134_730_1611 292
208 3300049684 Ga0501255_012220 Ga0501255_012220_19_900 292
209 3300049686 Ga0501257_006617 Ga0501257_006617_815_1696 292
210 3300049688 Ga0501259_001970 Ga0501259_001970_1334_2215 292
211 3300049690 Ga0501261_001329 Ga0501261_001329_1296_2177 292
212 3300049704 Ga0501221_004789 Ga0501221_004789_1168_2049 292
213 3300049705 Ga0501225_0000513 Ga0501225_0000513_319_1200 292
214 3300049705 Ga0501225_0021103 Ga0501225_0021103_182_1063 292
215 3300049707 Ga0501234_001641 Ga0501234_001641_1121_2002 292
216 3300049776 Ga0501280_009661 Ga0501280_009661_258_1139 292
217 3300049851 Ga0501212_000485 Ga0501212_000485_1804_2685 292
218 3300053086 Ga0500578_0000066 Ga0500578_0000066_84819_85700 292
219 3300053086 Ga0500578_0009036 Ga0500578_0009036_2608_3489 292
220 3300053134 Ga0500658_0116788 Ga0500658_0116788_263_1144 292

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02900

LigB

Catalytic LigB subunit of aromatic ring-opening dioxygenase

37

285

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
2pw6-assembly1.cif.gz_A-2 crystal structure of uncharacterized protein jw3007 from escherichia coli k12 0.9 36 292
2pw6-assembly1.cif.gz_A-2 crystal structure of uncharacterized protein jw3007 from escherichia coli k12 0.893 36 292
3vsh-assembly1.cif.gz_C crystal structure of native 1,6-apd (with iron), 2-animophenol-1,6-dioxygenase 0.7718 37 291
8iq8-assembly1.cif.gz_D crystal structure of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (dhpao) from acinetobacter baumannii 0.7659 36 289
7txy-assembly2.cif.gz_E crystal structure of the 2-aminophenol 1,6-dioxygenase from the aro bacterial microcompartment of micromonospora rosaria 0.7582 37 292
ID Description Score Start End Superfamily
af_P24197_1_271_3.40.830.10 Alpha Beta;3-Layer(aba) Sandwich;Protocatechuate 4,5-dioxygenase; Chain B;LigB-like 0.9365 34 292 3.40.830.10
af_I1MQB9_2_262_3.40.830.10 Alpha Beta;3-Layer(aba) Sandwich;Protocatechuate 4,5-dioxygenase; Chain B;LigB-like 0.9061 37 292 3.40.830.10
af_P24197_1_271_3.40.830.10 Alpha Beta;3-Layer(aba) Sandwich;Protocatechuate 4,5-dioxygenase; Chain B;LigB-like 0.893 34 292 3.40.830.10
af_I1MQB9_2_262_3.40.830.10 Alpha Beta;3-Layer(aba) Sandwich;Protocatechuate 4,5-dioxygenase; Chain B;LigB-like 0.8863 37 292 3.40.830.10
2pw6A00 Alpha Beta;3-Layer(aba) Sandwich;Protocatechuate 4,5-dioxygenase; Chain B;LigB-like 0.8824 37 292 3.40.830.10
ID Description Score Start End GO Terms
AF-A0A520BPS9-F1-model_v4 Dioxygenase 0.9803 162 292 GO:0008198
GO:0008270
GO:0016701
GO:0051213
AF-A0A562PID9-F1-model_v4 4,5-DOPA dioxygenase extradiol 0.9768 192 292 GO:0051213
AF-A0A316DJ34-F1-model_v4 4,5-DOPA dioxygenase extradiol 0.9751 25 292 GO:0008198
GO:0008270
GO:0016701
GO:0051213
AF-A0A3D6EX41-F1-model_v4 4,5-DOPA dioxygenase extradiol 0.975 149 292 GO:0008198
GO:0008270
GO:0016701
GO:0051213
AF-A0A4V1J8U7-F1-model_v4 4,5-DOPA dioxygenase extradiol (EC 1.13.11.29) 0.9744 23 292 GO:0008198
GO:0008270
GO:0050297

Feature Viewer

pLDDT pTM Quality
84.11 0.84 High
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Predicted Structure (AlphaFold2)

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