F332581

General Info

Members Datasets Scaffolds Average Seq Length
220 123 440 148

Family's Representative Sequence

Representative Sequence 3300046499|Ga0495594_0643956|Ga0495594_0643956_48_554
Length 168
Sequence MLPARSTSRPLGAADLARKLTTKAGAEVVSRDDLGFLLAKATQRWNEVLTDHFGAAGYSDISPSYGSILLPLYEDDGLRMGELARRARLSKQSMTEMIRRLERDGLVERRSDPADGRASLIYLTARSRRFKPIAAATLLELDRLVRKRLSARRVAELKSALTELMELE

Samples

Sample ID Description Type Environment
1 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
7 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
8 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
9 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
10 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
14 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
15 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
16 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
17 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
18 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
19 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
20 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
21 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
22 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
23 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
24 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
25 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
30 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
31 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
32 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
33 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
34 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
35 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
39 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
40 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
41 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
42 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
43 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
44 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
54 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
55 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
56 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
57 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
58 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
59 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
60 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
61 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
62 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
63 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
64 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
65 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
66 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
67 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
68 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
69 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
70 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
71 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
72 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
73 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
74 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
76 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
77 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
79 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
90 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
91 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
92 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
93 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
94 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
95 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
96 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
97 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
98 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
99 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
100 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
101 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
102 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
103 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
104 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
107 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
108 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
109 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
110 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
111 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
112 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
113 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
114 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
115 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
116 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
117 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
118 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
119 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
120 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
121 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
122 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
123 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.45
Nodule 0
Rhizoplane 4.55
Rhizosphere 90
Stem 0
Stem Tuber 0
Unclassified 14.09

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495594_0643956 3300046499 Unclassified 600
2 JGI25407J50210_10010892 3300003373 Bacteria 2319
3 Ga0070670_100124664 3300005331 Bacteria 2223
4 Ga0070680_100479330 3300005336 Bacteria 1063
5 Ga0070660_100683321 3300005339 Bacteria 860
6 Ga0070674_101514886 3300005356 Bacteria 603
7 Ga0070708_100011066 3300005445 Bacteria 7330
8 Ga0070708_100141396 3300005445 Unclassified 2232
9 Ga0070681_10247696 3300005458 Bacteria 1695
10 Ga0070706_100010553 3300005467 Bacteria 8574
11 Ga0070707_100011776 3300005468 Bacteria 8163
12 Ga0070698_100015175 3300005471 Bacteria 8146
13 Ga0070684_100201551 3300005535 Bacteria 1812
14 Ga0070704_101254415 3300005549 Bacteria 677
15 Ga0070664_100257705 3300005564 Bacteria 1569
16 Ga0068857_100909423 3300005577 Bacteria 844
17 Ga0068870_10802777 3300005840 Bacteria 658
18 Ga0081455_10000910 3300005937 Bacteria 37911
19 Ga0081455_10013686 3300005937 Bacteria 7989
20 Ga0081455_10072688 3300005937 Bacteria 2846
21 Ga0081455_10085037 3300005937 Bacteria 2580
22 Ga0081455_10126185 3300005937 Unclassified 2008
23 Ga0081455_10204565 3300005937 Bacteria 1476
24 Ga0081455_10385077 3300005937 Unclassified 978
25 Ga0081538_10002723 3300005981 Bacteria 16985
26 Ga0081538_10009751 3300005981 Bacteria 7959
27 Ga0070717_10017253 3300006028 Bacteria 5613
28 Ga0075365_10104273 3300006038 Unclassified 1944
29 Ga0075368_10047866 3300006042 Unclassified 1693
30 Ga0075363_100005953 3300006048 Bacteria 5497
31 Ga0075364_10066479 3300006051 Bacteria 2368
32 Ga0075367_10040357 3300006178 Unclassified 2725
33 Ga0075370_10103947 3300006353 Bacteria 1646
34 Ga0075428_100007895 3300006844 Bacteria 11796
35 Ga0075428_100008909 3300006844 Bacteria 11135
36 Ga0075428_100225638 3300006844 Unclassified 2022
37 Ga0075428_100373246 3300006844 Bacteria 1529
38 Ga0075428_100420869 3300006844 Bacteria 1431
39 Ga0075428_100724977 3300006844 Unclassified 1059
40 Ga0075428_101243973 3300006844 Archaea 784
41 Ga0075428_101869081 3300006844 Bacteria 624
42 Ga0075430_100074241 3300006846 Bacteria 2852
43 Ga0075430_100139515 3300006846 Bacteria 2019
44 Ga0075430_100241928 3300006846 Bacteria 1495
45 Ga0075430_100641711 3300006846 Unclassified 876
46 Ga0075431_100001466 3300006847 Bacteria 21767
47 Ga0075433_10097966 3300006852 Plasmid 2595
48 Ga0075433_10281954 3300006852 Bacteria 1472
49 Ga0075433_10863468 3300006852 Unclassified 790
50 Ga0075434_100038966 3300006871 Bacteria 4709
51 Ga0075434_100040091 3300006871 Plasmid 4639
52 Ga0075434_100624198 3300006871 Bacteria 1097
53 Ga0075429_100004564 3300006880 Bacteria 11902
54 Ga0075429_100028767 3300006880 Bacteria 4826
55 Ga0075429_100643771 3300006880 Bacteria 929
56 Ga0075436_100008770 3300006914 Bacteria 6915
57 Ga0075435_100089824 3300007076 Unclassified 2533
58 Ga0075435_100594143 3300007076 Unclassified 960
59 Ga0099794_10526834 3300007265 Unclassified 623
60 Ga0111539_10014795 3300009094 Bacteria 9732
61 Ga0111539_11728513 3300009094 Bacteria 725
62 Ga0114129_10017227 3300009147 Bacteria 10290
63 Ga0114129_10241482 3300009147 Bacteria 2428
64 Ga0114129_10434097 3300009147 Unclassified 1725
65 Ga0114129_10623348 3300009147 Bacteria 1395
66 Ga0114129_10958191 3300009147 Bacteria 1080
67 Ga0114129_11628156 3300009147 Unclassified 790
68 Ga0114129_12609573 3300009147 Bacteria 603
69 Ga0105239_10490120 3300010375 Bacteria 1397
70 Ga0105246_10560649 3300011119 Bacteria 980
71 Ga0105246_11013176 3300011119 Bacteria 753
72 Ga0105246_11501460 3300011119 Unclassified 633
73 Ga0157370_10393884 3300013104 Bacteria 1275
74 Ga0157372_12509569 3300013307 Unclassified 592
75 Ga0163163_10580775 3300014325 Bacteria 1184
76 Ga0182008_10788956 3300014497 Bacteria 550
77 Ga0182007_10125955 3300015262 Bacteria 859
78 Ga0207643_10604015 3300025908 Bacteria 706
79 Ga0207684_10002267 3300025910 Bacteria 19589
80 Ga0207684_10096115 3300025910 Bacteria 2528
81 Ga0207707_10257197 3300025912 Unclassified 1516
82 Ga0207657_10495059 3300025919 Bacteria 958
83 Ga0207646_10002906 3300025922 Bacteria 19878
84 Ga0207650_10095716 3300025925 Bacteria 2276
85 Ga0207679_10573616 3300025945 Bacteria 1014
86 Ga0207708_10380395 3300026075 Bacteria 1164
87 Ga0207702_10698741 3300026078 Bacteria 999
88 Ga0209813_10268337 3300027866 Bacteria 654
89 Ga0207428_10013136 3300027907 Bacteria 7249
90 Ga0307408_100799728 3300031548 Bacteria 856
91 Ga0307409_100171496 3300031995 Unclassified 1910
92 Ga0307415_101161696 3300032126 Bacteria 726
93 Ga0395900_0004735 3300037418 Bacteria 14352
94 Ga0395900_0303725 3300037418 Bacteria 1581
95 Ga0395900_0588450 3300037418 Bacteria 1054
96 Ga0395898_0026814 3300037466 Bacteria 5791
97 Ga0395898_0365437 3300037466 Bacteria 1376
98 Ga0395898_0493725 3300037466 Unclassified 1164
99 Ga0395898_1357002 3300037466 Bacteria 639
100 Ga0395901_0016695 3300038443 Bacteria 7480
101 Ga0395901_0192638 3300038443 Bacteria 2138
102 Ga0395901_1092914 3300038443 Unclassified 768
103 Ga0439466_0116059 3300041411 Bacteria 828
104 Ga0439435_0053064 3300042436 Bacteria 1165
105 Ga0453684_1457759 3300044712 Bacteria 708
106 Ga0466967_1778721 3300045976 Bacteria 613
107 Ga0496102_0278362 3300048905 Bacteria 1577
108 Ga0496103_0659285 3300048906 Bacteria 664
109 Ga0496105_0105179 3300048908 Bacteria 2330
110 Ga0496106_0009353 3300048909 Bacteria 7245
111 Ga0496107_0005443 3300048910 Bacteria 8715
112 Ga0496109_0146218 3300048912 Bacteria 2212
113 Ga0496109_0581765 3300048912 Bacteria 1055
114 Ga0496110_0415023 3300048913 Unclassified 1227
115 Ga0496111_0222350 3300048914 Unclassified 1403
116 Ga0496112_0101553 3300048915 Bacteria 2846
117 Ga0501031_0000671 3300049568 Bacteria 20378
118 Ga0501031_0071629 3300049568 Bacteria 2257
119 Ga0501031_0469106 3300049568 Bacteria 813
120 Ga0501032_0000289 3300049569 Bacteria 42315
121 Ga0501033_0001004 3300049570 Bacteria 25689
122 Ga0501034_0133273 3300049571 Bacteria 2467
123 Ga0501036_0001436 3300049572 Bacteria 18313
124 Ga0501036_0018432 3300049572 Bacteria 5848
125 Ga0501037_0014999 3300049573 Bacteria 5699
126 Ga0501038_0001405 3300049574 Bacteria 22037
127 Ga0501038_0022012 3300049574 Bacteria 5717
128 Ga0501038_0567683 3300049574 Bacteria 861
129 Ga0501039_0012227 3300049575 Bacteria 6542
130 Ga0501039_0048140 3300049575 Bacteria 3295
131 Ga0501039_0322509 3300049575 Bacteria 1214
132 Ga0501040_0000317 3300049576 Bacteria 28397
133 Ga0501040_0005564 3300049576 Bacteria 8156
134 Ga0501041_0002089 3300049577 Bacteria 11239
135 Ga0501041_0016599 3300049577 Bacteria 4379
136 Ga0501042_0000079 3300049578 Bacteria 36581
137 Ga0501042_0070053 3300049578 Bacteria 2508
138 Ga0501042_0080611 3300049578 Bacteria 2332
139 Ga0501043_0030620 3300049579 Bacteria 4229
140 Ga0501046_0000689 3300049580 Bacteria 32787
141 Ga0501047_0015718 3300049581 Bacteria 7211
142 Ga0501048_0001176 3300049582 Bacteria 19776
143 Ga0501048_0026194 3300049582 Bacteria 4245
144 Ga0501048_1015918 3300049582 Bacteria 596
145 Ga0501067_0000081 3300049583 Bacteria 54875
146 Ga0501068_0000501 3300049584 Bacteria 19932
147 Ga0501068_0001997 3300049584 Bacteria 10861
148 Ga0501069_0000064 3300049585 Bacteria 57844
149 Ga0501069_0027287 3300049585 Bacteria 3129
150 Ga0501070_0005718 3300049586 Bacteria 10603
151 Ga0501070_0059583 3300049586 Bacteria 3165
152 Ga0501071_0000107 3300049587 Bacteria 32264
153 Ga0501071_0011478 3300049587 Bacteria 5970
154 Ga0501071_0114462 3300049587 Bacteria 1995
155 Ga0501072_0016789 3300049588 Bacteria 5621
156 Ga0501072_0024948 3300049588 Bacteria 4654
157 Ga0501072_0757232 3300049588 Unclassified 762
158 Ga0501073_0001865 3300049589 Bacteria 15702
159 Ga0501073_0536655 3300049589 Bacteria 808
160 Ga0501074_0000090 3300049590 Bacteria 43760
161 Ga0501074_0187377 3300049590 Bacteria 1475
162 Ga0501075_0000070 3300049591 Bacteria 45029
163 Ga0501075_0033694 3300049591 Bacteria 3810
164 Ga0501076_0005830 3300049592 Bacteria 8885
165 Ga0501076_0009502 3300049592 Bacteria 7183
166 Ga0501077_0000737 3300049593 Bacteria 19798
167 Ga0501077_0010258 3300049593 Bacteria 5832
168 Ga0501077_0029327 3300049593 Bacteria 3498
169 Ga0501079_0000822 3300049741 Bacteria 21077
170 Ga0501079_0003877 3300049741 Bacteria 11030
171 Ga0501079_0116662 3300049741 Bacteria 2075
172 Ga0501079_1210253 3300049741 Bacteria 595
173 Ga0501080_0311561 3300049742 Bacteria 1426
174 Ga0501080_0435532 3300049742 Bacteria 1176
175 Ga0501081_0000820 3300049743 Bacteria 18365
176 Ga0501081_0021302 3300049743 Bacteria 4324
177 Ga0501081_0253926 3300049743 Bacteria 1284
178 Ga0501083_0000086 3300049744 Bacteria 63536
179 Ga0501083_0071352 3300049744 Bacteria 2309
180 Ga0501035_0000369 3300049822 Bacteria 51828
181 Ga0501035_0068139 3300049822 Bacteria 3156
182 Ga0501044_0161702 3300049823 Bacteria 2215
183 Ga0501045_0003387 3300049824 Bacteria 10915
184 Ga0501045_0029398 3300049824 Bacteria 3972
185 nmdc:mga00v17_3761_c1 3300050491 Bacteria 7832
186 nmdc:mga0yw44_35747_c1 3300050492 Bacteria 2922
187 nmdc:mga06z11_92000_c1 3300050494 Bacteria 1648
188 nmdc:mga04h51_300733_c1 3300050495 Bacteria 654
189 nmdc:mga07m45_81280_c1 3300050496 Bacteria 1850
190 nmdc:mga05p37_1362078_c1 3300050507 Bacteria 718
191 nmdc:mga05p37_1398661_c1 3300050507 Bacteria 705
192 nmdc:mga05p37_17057_c2 3300050507 Bacteria 8444
193 nmdc:mga05p37_2610_c1 3300050507 Bacteria 20978
194 nmdc:mga05p37_430446_c1 3300050507 Bacteria 1533
195 nmdc:mga05p37_697336_c1 3300050507 Bacteria 1128
196 nmdc:mga05p37_860955_c1 3300050507 Bacteria 983
197 nmdc:mga09592_3156_c1 3300050508 Bacteria 13388
198 nmdc:mga0qj67_61605_c1 3300050509 Bacteria 2979
199 nmdc:mga0qj67_70937_c1 3300050509 Unclassified 2780
200 nmdc:mga0qj67_731773_c1 3300050509 Bacteria 786
201 nmdc:mga06r32_2901_c1 3300050510 Bacteria 15391
202 nmdc:mga06r32_394179_c1 3300050510 Bacteria 1367
203 nmdc:mga08y16_280857_c1 3300050511 Bacteria 1717
204 nmdc:mga08y16_5625_c1 3300050511 Bacteria 13128
205 nmdc:mga0n895_18000_c1 3300050512 Bacteria 6530
206 nmdc:mga0n895_195190_c1 3300050512 Bacteria 2055
207 nmdc:mga0n895_39319_c1 3300050512 Bacteria 4590
208 nmdc:mga0n895_814125_c1 3300050512 Unclassified 924
209 nmdc:mga0rr50_1056706_c1 3300050513 Unclassified 691
210 nmdc:mga0rr50_243005_c1 3300050513 Unclassified 1493
211 nmdc:mga08x19_56465_c1 3300050514 Unclassified 2534
212 nmdc:mga0a205_104822_c1 3300050515 Plasmid 2727
213 nmdc:mga0a205_106119_c1 3300050515 Bacteria 2707
214 Ga0501084_0005710 3300054114 Bacteria 10226
215 Ga0501084_0008825 3300054114 Bacteria 8342
216 Ga0501084_0611502 3300054114 Unclassified 921
217 Ga0501082_0001195 3300060353 Bacteria 22857
218 Ga0501082_0084495 3300060353 Bacteria 2737
219 Ga0530510_0001205 3300061734 Bacteria 17249
220 Ga0530510_0616763 3300061734 Bacteria 825
221 Ga0495594_0643956
222 JGI25407J50210_10010892
223 Ga0070670_100124664
224 Ga0070680_100479330
225 Ga0070660_100683321
226 Ga0070674_101514886
227 Ga0070708_100011066
228 Ga0070708_100141396
229 Ga0070681_10247696
230 Ga0070706_100010553
231 Ga0070707_100011776
232 Ga0070698_100015175
233 Ga0070684_100201551
234 Ga0070704_101254415
235 Ga0070664_100257705
236 Ga0068857_100909423
237 Ga0068870_10802777
238 Ga0081455_10000910
239 Ga0081455_10013686
240 Ga0081455_10072688
241 Ga0081455_10085037
242 Ga0081455_10126185
243 Ga0081455_10204565
244 Ga0081455_10385077
245 Ga0081538_10002723
246 Ga0081538_10009751
247 Ga0070717_10017253
248 Ga0075365_10104273
249 Ga0075368_10047866
250 Ga0075363_100005953
251 Ga0075364_10066479
252 Ga0075367_10040357
253 Ga0075370_10103947
254 Ga0075428_100007895
255 Ga0075428_100008909
256 Ga0075428_100225638
257 Ga0075428_100373246
258 Ga0075428_100420869
259 Ga0075428_100724977
260 Ga0075428_101243973
261 Ga0075428_101869081
262 Ga0075430_100074241
263 Ga0075430_100139515
264 Ga0075430_100241928
265 Ga0075430_100641711
266 Ga0075431_100001466
267 Ga0075433_10097966
268 Ga0075433_10281954
269 Ga0075433_10863468
270 Ga0075434_100038966
271 Ga0075434_100040091
272 Ga0075434_100624198
273 Ga0075429_100004564
274 Ga0075429_100028767
275 Ga0075429_100643771
276 Ga0075436_100008770
277 Ga0075435_100089824
278 Ga0075435_100594143
279 Ga0099794_10526834
280 Ga0111539_10014795
281 Ga0111539_11728513
282 Ga0114129_10017227
283 Ga0114129_10241482
284 Ga0114129_10434097
285 Ga0114129_10623348
286 Ga0114129_10958191
287 Ga0114129_11628156
288 Ga0114129_12609573
289 Ga0105239_10490120
290 Ga0105246_10560649
291 Ga0105246_11013176
292 Ga0105246_11501460
293 Ga0157370_10393884
294 Ga0157372_12509569
295 Ga0163163_10580775
296 Ga0182008_10788956
297 Ga0182007_10125955
298 Ga0207643_10604015
299 Ga0207684_10002267
300 Ga0207684_10096115
301 Ga0207707_10257197
302 Ga0207657_10495059
303 Ga0207646_10002906
304 Ga0207650_10095716
305 Ga0207679_10573616
306 Ga0207708_10380395
307 Ga0207702_10698741
308 Ga0209813_10268337
309 Ga0207428_10013136
310 Ga0307408_100799728
311 Ga0307409_100171496
312 Ga0307415_101161696
313 Ga0395900_0004735
314 Ga0395900_0303725
315 Ga0395900_0588450
316 Ga0395898_0026814
317 Ga0395898_0365437
318 Ga0395898_0493725
319 Ga0395898_1357002
320 Ga0395901_0016695
321 Ga0395901_0192638
322 Ga0395901_1092914
323 Ga0439466_0116059
324 Ga0439435_0053064
325 Ga0453684_1457759
326 Ga0466967_1778721
327 Ga0496102_0278362
328 Ga0496103_0659285
329 Ga0496105_0105179
330 Ga0496106_0009353
331 Ga0496107_0005443
332 Ga0496109_0146218
333 Ga0496109_0581765
334 Ga0496110_0415023
335 Ga0496111_0222350
336 Ga0496112_0101553
337 Ga0501031_0000671
338 Ga0501031_0071629
339 Ga0501031_0469106
340 Ga0501032_0000289
341 Ga0501033_0001004
342 Ga0501034_0133273
343 Ga0501036_0001436
344 Ga0501036_0018432
345 Ga0501037_0014999
346 Ga0501038_0001405
347 Ga0501038_0022012
348 Ga0501038_0567683
349 Ga0501039_0012227
350 Ga0501039_0048140
351 Ga0501039_0322509
352 Ga0501040_0000317
353 Ga0501040_0005564
354 Ga0501041_0002089
355 Ga0501041_0016599
356 Ga0501042_0000079
357 Ga0501042_0070053
358 Ga0501042_0080611
359 Ga0501043_0030620
360 Ga0501046_0000689
361 Ga0501047_0015718
362 Ga0501048_0001176
363 Ga0501048_0026194
364 Ga0501048_1015918
365 Ga0501067_0000081
366 Ga0501068_0000501
367 Ga0501068_0001997
368 Ga0501069_0000064
369 Ga0501069_0027287
370 Ga0501070_0005718
371 Ga0501070_0059583
372 Ga0501071_0000107
373 Ga0501071_0011478
374 Ga0501071_0114462
375 Ga0501072_0016789
376 Ga0501072_0024948
377 Ga0501072_0757232
378 Ga0501073_0001865
379 Ga0501073_0536655
380 Ga0501074_0000090
381 Ga0501074_0187377
382 Ga0501075_0000070
383 Ga0501075_0033694
384 Ga0501076_0005830
385 Ga0501076_0009502
386 Ga0501077_0000737
387 Ga0501077_0010258
388 Ga0501077_0029327
389 Ga0501079_0000822
390 Ga0501079_0003877
391 Ga0501079_0116662
392 Ga0501079_1210253
393 Ga0501080_0311561
394 Ga0501080_0435532
395 Ga0501081_0000820
396 Ga0501081_0021302
397 Ga0501081_0253926
398 Ga0501083_0000086
399 Ga0501083_0071352
400 Ga0501035_0000369
401 Ga0501035_0068139
402 Ga0501044_0161702
403 Ga0501045_0003387
404 Ga0501045_0029398
405 nmdc:mga00v17_3761_c1
406 nmdc:mga0yw44_35747_c1
407 nmdc:mga06z11_92000_c1
408 nmdc:mga04h51_300733_c1
409 nmdc:mga07m45_81280_c1
410 nmdc:mga05p37_1362078_c1
411 nmdc:mga05p37_1398661_c1
412 nmdc:mga05p37_17057_c2
413 nmdc:mga05p37_2610_c1
414 nmdc:mga05p37_430446_c1
415 nmdc:mga05p37_697336_c1
416 nmdc:mga05p37_860955_c1
417 nmdc:mga09592_3156_c1
418 nmdc:mga0qj67_61605_c1
419 nmdc:mga0qj67_70937_c1
420 nmdc:mga0qj67_731773_c1
421 nmdc:mga06r32_2901_c1
422 nmdc:mga06r32_394179_c1
423 nmdc:mga08y16_280857_c1
424 nmdc:mga08y16_5625_c1
425 nmdc:mga0n895_18000_c1
426 nmdc:mga0n895_195190_c1
427 nmdc:mga0n895_39319_c1
428 nmdc:mga0n895_814125_c1
429 nmdc:mga0rr50_1056706_c1
430 nmdc:mga0rr50_243005_c1
431 nmdc:mga08x19_56465_c1
432 nmdc:mga0a205_104822_c1
433 nmdc:mga0a205_106119_c1
434 Ga0501084_0005710
435 Ga0501084_0008825
436 Ga0501084_0611502
437 Ga0501082_0001195
438 Ga0501082_0084495
439 Ga0530510_0001205
440 Ga0530510_0616763

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12802

MarR_2

MarR family

59

118

0.97

PF01047

MarR

MarR family

61

119

0.94

PF13412

HTH_24

Winged helix-turn-helix DNA-binding

67

108

0.93

PF13463

HTH_27

Winged helix DNA-binding domain

67

127

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
4kmf-assembly1.cif.gz_A-2 crystal structure of zalpha domain from carassius auratus pkz in complex with z-dna 0.9476 40 99
5j6x-assembly2.cif.gz_B crystal structure of the apo-zalpha of zebrafish pkz 0.9182 40 98
2dk5-assembly1.cif.gz_A solution structure of winged-helix domain in rna polymerase iii 39kda polypeptide 0.9097 52 98
5k5o-assembly1.cif.gz_C structure of aspa-26mer dna complex 0.9033 40 118
2f2e-assembly1.cif.gz_A crystal structure of pa1607, a putative transcription factor 0.9022 43 109
ID Description Score Start End Superfamily
af_P30852_292_361_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9538 50 86 1.10.10.10
4kmfA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9476 40 99 1.10.10.10
1s3jB02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9353 36 99 1.10.10.10
af_Q4DKK4_76_138_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9334 41 98 1.10.10.10
2vxzA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9293 40 98 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A538C4E2-F1-model_v4 MarR family transcriptional regulator 0.9726 3 142 GO:0003677
GO:0003700
GO:0006950
AF-A0A537K2V5-F1-model_v4 MarR family transcriptional regulator 0.9704 4 143 GO:0003677
GO:0003700
GO:0006950
AF-A0A538CP77-F1-model_v4 MarR family transcriptional regulator 0.9596 4 142 GO:0003700
GO:0006950
AF-A0A538C4E2-F1-model_v4 MarR family transcriptional regulator 0.9593 3 142 GO:0003677
GO:0003700
GO:0006950
AF-A0A2V7Q2F5-F1-model_v4 HTH marR-type domain-containing protein 0.9515 3 149 GO:0003677
GO:0003700
GO:0006950

Map