F331411

General Info

Members Datasets Scaffolds Average Seq Length
219 171 438 191

Family's Representative Sequence

Representative Sequence 3300046455|Ga0495603_0014015|Ga0495603_0014015_2418_3068
Length 216
Sequence LAGHIVVGKVVERVSPRKSDSRERMILSAAALLREYGASATSIDRVLAHSGAPRGSVYHHFPGGRAQLIDEAVALAGDFIAGLIDAITQADDPVEAIDAFFVLWRDRLVKSDFRAGCPIVAVAVETNDDAPQLARSAAAVFARWQEALAALFVRHGLTEERSRRLGSFIIAAVEGAVIMCRAEQSTAPIEAAAAEIHDLLLYVLRDRSEAEPRPRS

Samples

Sample ID Description Type Environment
1 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
13 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
24 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
31 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
32 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
33 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
34 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
35 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
36 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
37 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
38 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
42 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
47 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
48 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
51 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
56 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
78 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
79 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
80 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
81 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
82 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
83 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
84 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
85 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
86 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
87 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
88 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
89 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
90 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
91 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
92 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
93 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
94 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
95 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
96 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
97 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
98 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
99 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
100 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
101 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
102 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
103 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
104 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
105 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
106 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
107 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
108 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
109 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
110 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
111 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
112 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
113 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
114 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
115 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
116 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
117 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
118 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
119 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
120 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
121 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
122 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
123 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
124 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
125 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
126 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
127 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
128 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
129 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
130 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
131 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
132 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
133 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
134 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
135 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
136 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
137 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
138 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
139 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
140 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
141 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
142 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
143 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
144 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
145 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
146 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
147 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
148 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
149 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
150 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
151 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
152 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
153 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
154 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
155 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
156 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
157 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
158 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
159 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
160 2643221578 Streptomyces sp. Root63 Isolate Unclassified
161 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
162 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
163 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
164 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
165 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
166 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
167 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
168 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
169 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
170 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
171 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.52
Metatranscriptomes 0
Isolates 5.48

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.39
Nodule 0.91
Rhizoplane 8.68
Rhizosphere 75.34
Stem 0
Stem Tuber 0
Unclassified 0.46

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495603_0014015 3300046455 Bacteria 4848
2 rootH1_10052779 3300003316 Bacteria 1813
3 Ga0070658_10793368 3300005327 Bacteria 823
4 Ga0070683_100014534 3300005329 Bacteria 6890
5 Ga0070682_100044152 3300005337 Bacteria 2759
6 Ga0068868_100025680 3300005338 Bacteria 4484
7 Ga0070660_100001975 3300005339 Bacteria 14159
8 Ga0070661_100169128 3300005344 Bacteria 1659
9 Ga0070668_100204273 3300005347 Bacteria 1623
10 Ga0070668_100286172 3300005347 Bacteria 1378
11 Ga0070675_100657314 3300005354 Bacteria 953
12 Ga0070659_100182430 3300005366 Bacteria 1723
13 Ga0070710_10309073 3300005437 Bacteria 1034
14 Ga0070701_10180175 3300005438 Bacteria 1236
15 Ga0070711_100510743 3300005439 Bacteria 992
16 Ga0070700_100002397 3300005441 Bacteria 9554
17 Ga0070700_100086762 3300005441 Bacteria 2033
18 Ga0070663_100031652 3300005455 Bacteria 3637
19 Ga0070663_101222199 3300005455 Bacteria 661
20 Ga0070678_101181906 3300005456 Bacteria 709
21 Ga0070681_10631924 3300005458 Bacteria 985
22 Ga0070706_100155284 3300005467 Bacteria 2136
23 Ga0070707_100020220 3300005468 Bacteria 6277
24 Ga0070707_100466683 3300005468 Bacteria 1223
25 Ga0070699_100732450 3300005518 Bacteria 904
26 Ga0070684_100012027 3300005535 Bacteria 6918
27 Ga0070693_100332325 3300005547 Bacteria 1035
28 Ga0070704_100097341 3300005549 Bacteria 2208
29 Ga0070704_100272208 3300005549 Bacteria 1400
30 Ga0070664_101172469 3300005564 Bacteria 724
31 Ga0068854_100380580 3300005578 Bacteria 1163
32 Ga0068856_100006449 3300005614 Bacteria 11509
33 Ga0068852_100867311 3300005616 Bacteria 919
34 Ga0068864_100013417 3300005618 Bacteria 6791
35 Ga0068866_10352170 3300005718 Bacteria 936
36 Ga0081539_10004641 3300005985 Bacteria 14955
37 Ga0070717_10351870 3300006028 Bacteria 1317
38 Ga0075365_10008822 3300006038 Bacteria 5750
39 Ga0075363_100003392 3300006048 Bacteria 6770
40 Ga0075363_100390626 3300006048 Bacteria 817
41 Ga0075364_10063340 3300006051 Bacteria 2427
42 Ga0070712_100178954 3300006175 Bacteria 1651
43 Ga0075369_10096986 3300006186 Bacteria 1320
44 Ga0075370_10097408 3300006353 Bacteria 1701
45 Ga0075433_10013028 3300006852 Bacteria 6743
46 Ga0075433_10372938 3300006852 Bacteria 1260
47 Ga0075434_101268793 3300006871 Bacteria 748
48 Ga0075436_100042241 3300006914 Bacteria 3144
49 Ga0075436_100154639 3300006914 Bacteria 1615
50 Ga0075435_100005274 3300007076 Bacteria 9002
51 Ga0075435_100120045 3300007076 Bacteria 2193
52 Ga0111539_10045515 3300009094 Bacteria 5252
53 Ga0111539_10535344 3300009094 Bacteria 1365
54 Ga0111539_10782187 3300009094 Bacteria 1111
55 Ga0105245_10004018 3300009098 Bacteria 13082
56 Ga0114129_10024609 3300009147 Bacteria 8532
57 Ga0105243_10065738 3300009148 Bacteria 2914
58 Ga0105242_10886869 3300009176 Bacteria 891
59 Ga0105249_10156833 3300009553 Bacteria 2196
60 Ga0105239_10030753 3300010375 Bacteria 5905
61 Ga0105246_10113844 3300011119 Bacteria 1992
62 Ga0157374_10635861 3300013296 Bacteria 1078
63 Ga0157372_10116191 3300013307 Bacteria 3068
64 Ga0157375_10218491 3300013308 Bacteria 2064
65 Ga0157375_10375439 3300013308 Bacteria 1588
66 Ga0163163_10336964 3300014325 Bacteria 1563
67 Ga0163163_11089003 3300014325 Bacteria 862
68 Ga0157380_10080918 3300014326 Bacteria 2655
69 Ga0207642_10586009 3300025899 Bacteria 693
70 Ga0207688_10574992 3300025901 Bacteria 709
71 Ga0207705_10195581 3300025909 Bacteria 1531
72 Ga0207684_10174969 3300025910 Bacteria 1851
73 Ga0207707_10670920 3300025912 Bacteria 872
74 Ga0207693_10008516 3300025915 Bacteria 8397
75 Ga0207657_10011344 3300025919 Bacteria 8850
76 Ga0207646_10126572 3300025922 Bacteria 2297
77 Ga0207659_10086880 3300025926 Bacteria 2327
78 Ga0207700_10919693 3300025928 Bacteria 783
79 Ga0207690_10680730 3300025932 Bacteria 844
80 Ga0207712_10451463 3300025961 Bacteria 1090
81 Ga0207668_10331235 3300025972 Bacteria 1267
82 Ga0207639_11403237 3300026041 Bacteria 655
83 Ga0207678_10009810 3300026067 Bacteria 8420
84 Ga0207708_10002125 3300026075 Bacteria 14611
85 Ga0207708_10244939 3300026075 Bacteria 1443
86 Ga0207676_10323405 3300026095 Bacteria 1417
87 Ga0207675_100126670 3300026118 Bacteria 2419
88 Ga0207675_100983187 3300026118 Bacteria 862
89 Ga0207683_10043170 3300026121 Bacteria 3940
90 Ga0207698_11435583 3300026142 Bacteria 705
91 Ga0268265_10472376 3300028380 Bacteria 1176
92 Ga0265337_1000416 3300028556 Bacteria 22767
93 Ga0265326_10002025 3300028558 Bacteria 6928
94 Ga0265319_1004052 3300028563 Bacteria 7391
95 Ga0265334_10002739 3300028573 Bacteria 8144
96 Ga0265318_10014338 3300028577 Bacteria 3331
97 Ga0265322_10014194 3300028654 Bacteria 2302
98 Ga0307515_10000060 3300028794 Bacteria 254768
99 Ga0307515_10189135 3300028794 Bacteria 1976
100 Ga0265338_10001865 3300028800 Bacteria 33117
101 Ga0307511_10092873 3300030521 Bacteria 2032
102 Ga0307512_10004942 3300030522 Bacteria 14217
103 Ga0265332_10006062 3300031238 Bacteria 5523
104 Ga0265320_10042993 3300031240 Bacteria 2236
105 Ga0265339_10044452 3300031249 Bacteria 2450
106 Ga0307513_10118175 3300031456 Bacteria 2626
107 Ga0307513_10191378 3300031456 Bacteria 1897
108 Ga0307509_10514709 3300031507 Bacteria 879
109 Ga0265313_10020668 3300031595 Bacteria 3624
110 Ga0265314_10024301 3300031711 Bacteria 4596
111 Ga0307516_10000479 3300031730 Bacteria 53051
112 Ga0307405_10817882 3300031731 Bacteria 782
113 Ga0307415_100141613 3300032126 Bacteria 1838
114 Ga0373955_0437384 3300035172 Bacteria 797
115 Ga0373937_0886048 3300036401 Bacteria 841
116 Ga0395898_0002459 3300037466 Bacteria 21851
117 Ga0395898_0003407 3300037466 Bacteria 17810
118 Ga0395898_1051455 3300037466 Bacteria 749
119 Ga0395901_0771349 3300038443 Bacteria 953
120 Ga0436363_0858575 3300039450 Bacteria 1302
121 Ga0439436_0013775 3300041404 Bacteria 2445
122 Ga0439439_0007203 3300041406 Bacteria 2595
123 Ga0451851_0326115 3300041507 Bacteria 864
124 Ga0451853_2069545 3300041512 Unclassified 809
125 Ga0439449_0016195 3300042007 Bacteria 2802
126 Ga0466969_0015584 3300044656 Bacteria 3983
127 Ga0466969_0124910 3300044656 Bacteria 1196
128 Ga0466966_0091617 3300044684 Bacteria 1887
129 Ga0466966_0272030 3300044684 Bacteria 1019
130 Ga0466961_0008016 3300044693 Bacteria 6734
131 Ga0466961_0168880 3300044693 Bacteria 1361
132 Ga0466961_0372051 3300044693 Bacteria 868
133 Ga0466963_0015534 3300044694 Bacteria 4717
134 Ga0466963_0023794 3300044694 Bacteria 3894
135 Ga0466963_0043021 3300044694 Bacteria 2968
136 Ga0466963_0339059 3300044694 Bacteria 1058
137 Ga0466971_0022600 3300044719 Bacteria 2803
138 Ga0466957_0607398 3300044842 Bacteria 766
139 Ga0466959_0005131 3300045049 Bacteria 8919
140 Ga0466959_0042707 3300045049 Bacteria 3344
141 Ga0466959_0052314 3300045049 Bacteria 2992
142 Ga0466958_0012199 3300045836 Bacteria 4860
143 Ga0466958_0064733 3300045836 Bacteria 2230
144 Ga0466958_0080956 3300045836 Bacteria 1998
145 Ga0466958_0713332 3300045836 Bacteria 653
146 Ga0466967_0043715 3300045976 Bacteria 3881
147 Ga0466967_0146452 3300045976 Bacteria 2203
148 Ga0495603_0061495 3300046455 Bacteria 2218
149 Ga0495629_0030029 3300046459 Bacteria 3854
150 Ga0495651_0001047 3300046462 Bacteria 21414
151 Ga0495653_0214320 3300046463 Bacteria 1299
152 Ga0495580_0468577 3300046472 Bacteria 844
153 Ga0495607_0079718 3300046501 Bacteria 1803
154 Ga0495628_0094298 3300046516 Bacteria 2314
155 Ga0495630_0341965 3300046517 Bacteria 1145
156 Ga0495652_0000600 3300046529 Bacteria 42126
157 Ga0495640_0135931 3300046533 Bacteria 1588
158 Ga0495658_0536253 3300046683 Bacteria 749
159 Ga0495624_0098127 3300046690 Bacteria 1805
160 Ga0495589_0049975 3300046794 Bacteria 2069
161 Ga0495589_0144648 3300046794 Bacteria 1137
162 Ga0495600_0015900 3300046809 Bacteria 4767
163 Ga0495581_0080966 3300047315 Bacteria 1880
164 Ga0495604_0220928 3300047317 Bacteria 1304
165 Ga0495636_0001471 3300047318 Bacteria 8915
166 Ga0495676_0012952 3300047321 Bacteria 7503
167 Ga0495687_003184 3300047443 Bacteria 12211
168 Ga0495593_0211849 3300047673 Bacteria 973
169 Ga0496101_0054787 3300048904 Bacteria 2879
170 Ga0496104_0007362 3300048907 Bacteria 9722
171 Ga0496104_0807877 3300048907 Bacteria 844
172 Ga0496108_0005006 3300048911 Bacteria 10706
173 Ga0496108_0008402 3300048911 Bacteria 8376
174 Ga0496108_0357250 3300048911 Bacteria 1275
175 Ga0496109_0036048 3300048912 Bacteria 4465
176 Ga0496109_0038193 3300048912 Bacteria 4340
177 Ga0496109_0659435 3300048912 Bacteria 983
178 Ga0496110_0038693 3300048913 Bacteria 4151
179 Ga0496110_0153557 3300048913 Bacteria 2085
180 Ga0496111_0064767 3300048914 Bacteria 2652
181 Ga0496111_0338380 3300048914 Bacteria 1114
182 Ga0496112_0028916 3300048915 Bacteria 5356
183 Ga0496112_0304515 3300048915 Bacteria 1539
184 Ga0496112_0496169 3300048915 Bacteria 1156
185 Ga0496112_0650409 3300048915 Bacteria 984
186 Ga0496113_0373498 3300048916 Bacteria 1144
187 Ga0496119_0118410 3300048922 Bacteria 1459
188 Ga0496120_0032818 3300048923 Bacteria 3126
189 nmdc:mga03n38_141776_c1 3300050490 Bacteria 1201
190 nmdc:mga00v17_621857_c1 3300050491 Bacteria 696
191 nmdc:mga0yw44_350550_c1 3300050492 Bacteria 994
192 nmdc:mga0yw44_612105_c1 3300050492 Bacteria 740
193 nmdc:mga0yw44_659011_c1 3300050492 Bacteria 711
194 nmdc:mga07m45_95986_c1 3300050496 Bacteria 1701
195 nmdc:mga05p37_245882_c1 3300050507 Bacteria 2148
196 nmdc:mga05p37_900752_c1 3300050507 Bacteria 954
197 nmdc:mga06r32_13582_c1 3300050510 Bacteria 7383
198 nmdc:mga08y16_1173924_c1 3300050511 Bacteria 739
199 nmdc:mga08y16_259213_c1 3300050511 Bacteria 1796
200 nmdc:mga0n895_26552_c1 3300050512 Bacteria 5487
201 nmdc:mga0rr50_59798_c1 3300050513 Bacteria 2863
202 nmdc:mga08x19_77644_c1 3300050514 Bacteria 2175
203 nmdc:mga0a205_388702_c1 3300050515 Bacteria 1260
204 Ga0495655_0098171 3300053083 Bacteria 864
205 Ga0500644_0144395 3300053088 Bacteria 948
206 Ga0500577_0020361 3300053142 Bacteria 2168
207 Ga0466962_0185790 3300061719 Bacteria 1014
208 2643903486 2643221578 Bacteria 9213798
209 2644409648 2643221673 Bacteria 9196637
210 2784592858 2784132148 Bacteria 8627943
211 2808845885 2808606359 Bacteria 9866990
212 2862385331 2862382967 Bacteria 10317375
213 2873153094 2873151551 Bacteria 8625867
214 8008558950 8008558824 Bacteria 10610750
215 8047718370 8047710418 Bacteria 11023148
216 8047901543 8047893842 Bacteria 11723082
217 8048357350 8048356638 Bacteria 11044339
218 8048378481 8048369669 Bacteria 11666822
219 8048387582 8048379754 Bacteria 11877923
220 Ga0495603_0014015
221 rootH1_10052779
222 Ga0070658_10793368
223 Ga0070683_100014534
224 Ga0070682_100044152
225 Ga0068868_100025680
226 Ga0070660_100001975
227 Ga0070661_100169128
228 Ga0070668_100204273
229 Ga0070668_100286172
230 Ga0070675_100657314
231 Ga0070659_100182430
232 Ga0070710_10309073
233 Ga0070701_10180175
234 Ga0070711_100510743
235 Ga0070700_100002397
236 Ga0070700_100086762
237 Ga0070663_100031652
238 Ga0070663_101222199
239 Ga0070678_101181906
240 Ga0070681_10631924
241 Ga0070706_100155284
242 Ga0070707_100020220
243 Ga0070707_100466683
244 Ga0070699_100732450
245 Ga0070684_100012027
246 Ga0070693_100332325
247 Ga0070704_100097341
248 Ga0070704_100272208
249 Ga0070664_101172469
250 Ga0068854_100380580
251 Ga0068856_100006449
252 Ga0068852_100867311
253 Ga0068864_100013417
254 Ga0068866_10352170
255 Ga0081539_10004641
256 Ga0070717_10351870
257 Ga0075365_10008822
258 Ga0075363_100003392
259 Ga0075363_100390626
260 Ga0075364_10063340
261 Ga0070712_100178954
262 Ga0075369_10096986
263 Ga0075370_10097408
264 Ga0075433_10013028
265 Ga0075433_10372938
266 Ga0075434_101268793
267 Ga0075436_100042241
268 Ga0075436_100154639
269 Ga0075435_100005274
270 Ga0075435_100120045
271 Ga0111539_10045515
272 Ga0111539_10535344
273 Ga0111539_10782187
274 Ga0105245_10004018
275 Ga0114129_10024609
276 Ga0105243_10065738
277 Ga0105242_10886869
278 Ga0105249_10156833
279 Ga0105239_10030753
280 Ga0105246_10113844
281 Ga0157374_10635861
282 Ga0157372_10116191
283 Ga0157375_10218491
284 Ga0157375_10375439
285 Ga0163163_10336964
286 Ga0163163_11089003
287 Ga0157380_10080918
288 Ga0207642_10586009
289 Ga0207688_10574992
290 Ga0207705_10195581
291 Ga0207684_10174969
292 Ga0207707_10670920
293 Ga0207693_10008516
294 Ga0207657_10011344
295 Ga0207646_10126572
296 Ga0207659_10086880
297 Ga0207700_10919693
298 Ga0207690_10680730
299 Ga0207712_10451463
300 Ga0207668_10331235
301 Ga0207639_11403237
302 Ga0207678_10009810
303 Ga0207708_10002125
304 Ga0207708_10244939
305 Ga0207676_10323405
306 Ga0207675_100126670
307 Ga0207675_100983187
308 Ga0207683_10043170
309 Ga0207698_11435583
310 Ga0268265_10472376
311 Ga0265337_1000416
312 Ga0265326_10002025
313 Ga0265319_1004052
314 Ga0265334_10002739
315 Ga0265318_10014338
316 Ga0265322_10014194
317 Ga0307515_10000060
318 Ga0307515_10189135
319 Ga0265338_10001865
320 Ga0307511_10092873
321 Ga0307512_10004942
322 Ga0265332_10006062
323 Ga0265320_10042993
324 Ga0265339_10044452
325 Ga0307513_10118175
326 Ga0307513_10191378
327 Ga0307509_10514709
328 Ga0265313_10020668
329 Ga0265314_10024301
330 Ga0307516_10000479
331 Ga0307405_10817882
332 Ga0307415_100141613
333 Ga0373955_0437384
334 Ga0373937_0886048
335 Ga0395898_0002459
336 Ga0395898_0003407
337 Ga0395898_1051455
338 Ga0395901_0771349
339 Ga0436363_0858575
340 Ga0439436_0013775
341 Ga0439439_0007203
342 Ga0451851_0326115
343 Ga0451853_2069545
344 Ga0439449_0016195
345 Ga0466969_0015584
346 Ga0466969_0124910
347 Ga0466966_0091617
348 Ga0466966_0272030
349 Ga0466961_0008016
350 Ga0466961_0168880
351 Ga0466961_0372051
352 Ga0466963_0015534
353 Ga0466963_0023794
354 Ga0466963_0043021
355 Ga0466963_0339059
356 Ga0466971_0022600
357 Ga0466957_0607398
358 Ga0466959_0005131
359 Ga0466959_0042707
360 Ga0466959_0052314
361 Ga0466958_0012199
362 Ga0466958_0064733
363 Ga0466958_0080956
364 Ga0466958_0713332
365 Ga0466967_0043715
366 Ga0466967_0146452
367 Ga0495603_0061495
368 Ga0495629_0030029
369 Ga0495651_0001047
370 Ga0495653_0214320
371 Ga0495580_0468577
372 Ga0495607_0079718
373 Ga0495628_0094298
374 Ga0495630_0341965
375 Ga0495652_0000600
376 Ga0495640_0135931
377 Ga0495658_0536253
378 Ga0495624_0098127
379 Ga0495589_0049975
380 Ga0495589_0144648
381 Ga0495600_0015900
382 Ga0495581_0080966
383 Ga0495604_0220928
384 Ga0495636_0001471
385 Ga0495676_0012952
386 Ga0495687_003184
387 Ga0495593_0211849
388 Ga0496101_0054787
389 Ga0496104_0007362
390 Ga0496104_0807877
391 Ga0496108_0005006
392 Ga0496108_0008402
393 Ga0496108_0357250
394 Ga0496109_0036048
395 Ga0496109_0038193
396 Ga0496109_0659435
397 Ga0496110_0038693
398 Ga0496110_0153557
399 Ga0496111_0064767
400 Ga0496111_0338380
401 Ga0496112_0028916
402 Ga0496112_0304515
403 Ga0496112_0496169
404 Ga0496112_0650409
405 Ga0496113_0373498
406 Ga0496119_0118410
407 Ga0496120_0032818
408 nmdc:mga03n38_141776_c1
409 nmdc:mga00v17_621857_c1
410 nmdc:mga0yw44_350550_c1
411 nmdc:mga0yw44_612105_c1
412 nmdc:mga0yw44_659011_c1
413 nmdc:mga07m45_95986_c1
414 nmdc:mga05p37_245882_c1
415 nmdc:mga05p37_900752_c1
416 nmdc:mga06r32_13582_c1
417 nmdc:mga08y16_1173924_c1
418 nmdc:mga08y16_259213_c1
419 nmdc:mga0n895_26552_c1
420 nmdc:mga0rr50_59798_c1
421 nmdc:mga08x19_77644_c1
422 nmdc:mga0a205_388702_c1
423 Ga0495655_0098171
424 Ga0500644_0144395
425 Ga0500577_0020361
426 Ga0466962_0185790
427 2643903486
428 2644409648
429 2784592858
430 2808845885
431 2862385331
432 2873153094
433 8008558950
434 8047718370
435 8047901543
436 8048357350
437 8048378481
438 8048387582

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF21993

TetR_C_13_2

Transcriptional regulator LmrA/YxaF-like, C-terminal domain

93

195

0.99

PF16925

TetR_C_13

Tetracyclin repressor-like, C-terminal domain

93

196

0.93

PF00440

TetR_N

Bacterial regulatory proteins, tetR family

26

72

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
3on4-assembly4.cif.gz_F crystal structure of tetr transcriptional regulator from legionella pneumophila 0.9057 16 195
1sgm-assembly1.cif.gz_B crystal structure of hypothetical protein yxaf 0.9 16 197
1sgm-assembly1.cif.gz_B crystal structure of hypothetical protein yxaf 0.8864 16 197
3bru-assembly1.cif.gz_B crystal structure of regulatory protein tetr from rhodobacter sphaeroides 0.8776 18 195
3on4-assembly4.cif.gz_F crystal structure of tetr transcriptional regulator from legionella pneumophila 0.8738 16 195
ID Description Score Start End Superfamily
af_P9WME1_2_188_1.10.357.10 Mainly Alpha;Orthogonal Bundle;Tetracycline Repressor; domain 2;Tetracycline Repressor, domain 2 0.9474 16 199 1.10.357.10
1jusE01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9286 17 65 1.10.10.60
af_P9WME1_2_188_1.10.357.10 Mainly Alpha;Orthogonal Bundle;Tetracycline Repressor; domain 2;Tetracycline Repressor, domain 2 0.9277 16 199 1.10.357.10
1sgmB00 Mainly Alpha;Orthogonal Bundle;Tetracycline Repressor; domain 2;Tetracycline Repressor, domain 2 0.9 16 197 1.10.357.10
1jusE01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.8942 17 65 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A6G2MTV1-F1-model_v4 TetR family transcriptional regulator 0.986 23 199 GO:0003677
GO:0006355
AF-A0A4R2JLP8-F1-model_v4 TetR family transcriptional regulator 0.9801 16 199 GO:0003677
GO:0006355
AF-A0A6G9YBE3-F1-model_v4 Transcriptional regulator LmrA/YxaF-like C-terminal domain-containing protein 0.9789 89 199 GO:0003677
AF-A0A7W0A6D5-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9778 23 199 GO:0003677
GO:0006355
AF-L0IZG4-F1-model_v4 Transcriptional regulator 0.9766 23 199 GO:0003677
GO:0006355

Map