F331108
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 219 | 132 | 214 | 300 |
Family's Representative Sequence
| Representative Sequence | 3300014325|Ga0163163_10018402|Ga0163163_100184025 |
| Length | 353 |
| Sequence | VITERASAKINLFLHVGDKRADGFHPVQSLAVFTDLGDELAMETASGLSLTIDGPFAKGLDGESDNLVLRAANSLLGKRALDSQGAKLTLTKNLPVASGIGGGSADAAAALRGLRQLWQVAKDDVTLRDIAAGLGSDIPACLLSRPCFMEGRGEILRIVESMPRVPMLLVNPGVPVPTREVFAALKDRSGADMALPRGRFSDTADLLRFLETTRNDLEEPARRIQPVIGEVLRALCDLPGALFARMSGSGATCFGIFADDDCCVRAAALLKNAHPGWWIAPTFVPETGIVHDQPGQEIGPTPEGFDRLAKICPDFSGADRQRAGRFLSLERTAHVWRATQDSGGAGGRPEIFR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2861691609 | Methylorubrum thiocyanatum DSM 11490 | Isolate | Rhizosphere |
| 2 | 2883291878 | Hypericibacter terrae R5913 | Isolate | Rhizosphere |
| 3 | 2889306138 | Methylobacterium sp. PvR107 | Isolate | Rhizosphere |
| 4 | 2889790730 | Chelativorans xinjiangense lm93 | Isolate | Rhizosphere |
| 5 | 2889914905 | Chelativorans alearense UJN715 | Isolate | Rhizosphere |
| 6 | 3300003215 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF | Metagenome | Endosphere |
| 7 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 8 | 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Metagenome | Rhizosphere |
| 10 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 12 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 14 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 15 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 17 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 21 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 26 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 27 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 28 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 29 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 30 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 31 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 32 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 33 | 3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Metagenome | Rhizosphere |
| 34 | 3300005840 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 | Metagenome | Rhizosphere |
| 35 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 36 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 37 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 38 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 40 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 41 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 46 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 47 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 48 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 57 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 58 | 3300025899 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 93 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 94 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 95 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 96 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 97 | 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Metagenome | Rhizosphere |
| 98 | 3300035114 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 | Metagenome | Rhizosphere |
| 99 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 100 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 101 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 102 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 105 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 106 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 107 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 108 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 109 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 110 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 111 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 112 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 113 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 114 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 115 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 116 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 117 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 118 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 119 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 120 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 121 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 122 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 123 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 124 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 125 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 126 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 127 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 128 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
| 129 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 130 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 131 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 132 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 97.72 |
| Metatranscriptomes | 0 |
| Isolates | 2.28 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 2.74 |
| Nodule | 0 |
| Rhizoplane | 0.91 |
| Rhizosphere | 94.98 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 1.37 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25153J46596_10000607 | 3300003215 | Bacteria | 21930 |
| 2 | rootH2_10226966 | 3300003320 | Bacteria | 1755 |
| 3 | Ga0070676_10011433 | 3300005328 | Bacteria | 4827 |
| 4 | Ga0070690_100038612 | 3300005330 | Bacteria | 3014 |
| 5 | Ga0070670_100315085 | 3300005331 | Bacteria | 1370 |
| 6 | Ga0068869_100013882 | 3300005334 | Bacteria | 5371 |
| 7 | Ga0070666_10014574 | 3300005335 | Bacteria | 5007 |
| 8 | Ga0070680_100272630 | 3300005336 | Bacteria | 1433 |
| 9 | Ga0068868_100067425 | 3300005338 | Bacteria | 2848 |
| 10 | Ga0068868_100106467 | 3300005338 | Bacteria | 2275 |
| 11 | Ga0070660_100138553 | 3300005339 | Bacteria | 1950 |
| 12 | Ga0070689_100292049 | 3300005340 | Bacteria | 1355 |
| 13 | Ga0070661_100051452 | 3300005344 | Bacteria | 3015 |
| 14 | Ga0070671_100065811 | 3300005355 | Bacteria | 3020 |
| 15 | Ga0070673_100014496 | 3300005364 | Bacteria | 5494 |
| 16 | Ga0070688_100170121 | 3300005365 | Bacteria | 1503 |
| 17 | Ga0070659_100030160 | 3300005366 | Bacteria | 4196 |
| 18 | Ga0070667_100116672 | 3300005367 | Bacteria | 2319 |
| 19 | Ga0070667_100173855 | 3300005367 | Bacteria | 1902 |
| 20 | Ga0070678_100007838 | 3300005456 | Bacteria | 6354 |
| 21 | Ga0070678_100104639 | 3300005456 | Bacteria | 2201 |
| 22 | Ga0070662_100118013 | 3300005457 | Bacteria | 2030 |
| 23 | Ga0070681_10246335 | 3300005458 | Bacteria | 1700 |
| 24 | Ga0070681_10412156 | 3300005458 | Bacteria | 1263 |
| 25 | Ga0068867_100004006 | 3300005459 | Bacteria | 10357 |
| 26 | Ga0068867_100021331 | 3300005459 | Bacteria | 4622 |
| 27 | Ga0070679_100069647 | 3300005530 | Bacteria | 3509 |
| 28 | Ga0068853_100043182 | 3300005539 | Bacteria | 3857 |
| 29 | Ga0068853_100377783 | 3300005539 | Bacteria | 1323 |
| 30 | Ga0070665_100000656 | 3300005548 | Bacteria | 46656 |
| 31 | Ga0070665_100017420 | 3300005548 | Bacteria | 7212 |
| 32 | Ga0070665_100021846 | 3300005548 | Bacteria | 6435 |
| 33 | Ga0070665_100159622 | 3300005548 | Bacteria | 2256 |
| 34 | Ga0070665_100223529 | 3300005548 | Bacteria | 1883 |
| 35 | Ga0068855_100034219 | 3300005563 | Bacteria | 6061 |
| 36 | Ga0068852_100062647 | 3300005616 | Bacteria | 3235 |
| 37 | Ga0068852_100128416 | 3300005616 | Bacteria | 2331 |
| 38 | Ga0068864_100208693 | 3300005618 | Bacteria | 1798 |
| 39 | Ga0068851_10065738 | 3300005834 | Bacteria | 1867 |
| 40 | Ga0068870_10021743 | 3300005840 | Bacteria | 3143 |
| 41 | Ga0068870_10276918 | 3300005840 | Bacteria | 1050 |
| 42 | Ga0068863_100071995 | 3300005841 | Bacteria | 3270 |
| 43 | Ga0068858_100017014 | 3300005842 | Bacteria | 6827 |
| 44 | Ga0068858_100126662 | 3300005842 | Bacteria | 2392 |
| 45 | Ga0068858_100552654 | 3300005842 | Bacteria | 1115 |
| 46 | Ga0068860_100025342 | 3300005843 | Bacteria | 5723 |
| 47 | Ga0068860_100158864 | 3300005843 | Bacteria | 2179 |
| 48 | Ga0068860_100203537 | 3300005843 | Bacteria | 1919 |
| 49 | Ga0097621_100000351 | 3300006237 | Bacteria | 31761 |
| 50 | Ga0097621_100022167 | 3300006237 | Bacteria | 4926 |
| 51 | Ga0097621_100194107 | 3300006237 | Bacteria | 1760 |
| 52 | Ga0097621_100297091 | 3300006237 | Bacteria | 1426 |
| 53 | Ga0068871_100000292 | 3300006358 | Bacteria | 34915 |
| 54 | Ga0068871_100020670 | 3300006358 | Bacteria | 5047 |
| 55 | Ga0068871_100040339 | 3300006358 | Bacteria | 3739 |
| 56 | Ga0068871_100070813 | 3300006358 | Bacteria | 2866 |
| 57 | Ga0068865_100009948 | 3300006881 | Bacteria | 5908 |
| 58 | Ga0105240_10006282 | 3300009093 | Bacteria | 17480 |
| 59 | Ga0105240_10055083 | 3300009093 | Bacteria | 4980 |
| 60 | Ga0105240_10120724 | 3300009093 | Bacteria | 3156 |
| 61 | Ga0105240_10417570 | 3300009093 | Bacteria | 1508 |
| 62 | Ga0105245_10163748 | 3300009098 | Bacteria | 2112 |
| 63 | Ga0105243_10001141 | 3300009148 | Bacteria | 24108 |
| 64 | Ga0105248_10057586 | 3300009177 | Bacteria | 4363 |
| 65 | Ga0105248_10070891 | 3300009177 | Bacteria | 3914 |
| 66 | Ga0105248_10156408 | 3300009177 | Bacteria | 2573 |
| 67 | Ga0105237_10323071 | 3300009545 | Bacteria | 1547 |
| 68 | Ga0105239_10004412 | 3300010375 | Bacteria | 16840 |
| 69 | Ga0105239_10012007 | 3300010375 | Bacteria | 9659 |
| 70 | Ga0105239_10265554 | 3300010375 | Bacteria | 1929 |
| 71 | Ga0105246_10016358 | 3300011119 | Bacteria | 4697 |
| 72 | Ga0105246_10246239 | 3300011119 | Bacteria | 1416 |
| 73 | Ga0157371_10124681 | 3300013102 | Bacteria | 1832 |
| 74 | Ga0157369_10023093 | 3300013105 | Bacteria | 6930 |
| 75 | Ga0157369_10040843 | 3300013105 | Bacteria | 5064 |
| 76 | Ga0157378_10039799 | 3300013297 | Bacteria | 4169 |
| 77 | Ga0157378_10140825 | 3300013297 | Bacteria | 2240 |
| 78 | Ga0157378_10177577 | 3300013297 | Bacteria | 2001 |
| 79 | Ga0157378_10259944 | 3300013297 | Bacteria | 1665 |
| 80 | Ga0163162_10018934 | 3300013306 | Bacteria | 6751 |
| 81 | Ga0163162_10052870 | 3300013306 | Bacteria | 4081 |
| 82 | Ga0163163_10000006 | 3300014325 | Bacteria | 320401 |
| 83 | Ga0163163_10001320 | 3300014325 | Bacteria | 20935 |
| 84 | Ga0163163_10018402 | 3300014325 | Bacteria | 6539 |
| 85 | Ga0163163_10204466 | 3300014325 | Bacteria | 2023 |
| 86 | Ga0157379_10058131 | 3300014968 | Bacteria | 3457 |
| 87 | Ga0157379_10289485 | 3300014968 | Bacteria | 1491 |
| 88 | Ga0157379_10367568 | 3300014968 | Bacteria | 1319 |
| 89 | Ga0157376_10035176 | 3300014969 | Bacteria | 4051 |
| 90 | Ga0163161_10006284 | 3300017792 | Bacteria | 8224 |
| 91 | Ga0213872_10000278 | 3300021361 | Bacteria | 43638 |
| 92 | Ga0209758_1000013 | 3300025297 | Bacteria | 873003 |
| 93 | Ga0207642_10035092 | 3300025899 | Bacteria | 2139 |
| 94 | Ga0207688_10082483 | 3300025901 | Bacteria | 1838 |
| 95 | Ga0207680_10043308 | 3300025903 | Bacteria | 2639 |
| 96 | Ga0207680_10100487 | 3300025903 | Bacteria | 1858 |
| 97 | Ga0207705_10098248 | 3300025909 | Bacteria | 2151 |
| 98 | Ga0207707_10300540 | 3300025912 | Bacteria | 1388 |
| 99 | Ga0207707_10317734 | 3300025912 | Bacteria | 1345 |
| 100 | Ga0207707_10388041 | 3300025912 | Bacteria | 1200 |
| 101 | Ga0207695_10002278 | 3300025913 | Bacteria | 28735 |
| 102 | Ga0207695_10290498 | 3300025913 | Bacteria | 1527 |
| 103 | Ga0207695_10479114 | 3300025913 | Bacteria | 1127 |
| 104 | Ga0207660_10103929 | 3300025917 | Bacteria | 2126 |
| 105 | Ga0207657_10056440 | 3300025919 | Bacteria | 3388 |
| 106 | Ga0207649_10039347 | 3300025920 | Bacteria | 2867 |
| 107 | Ga0207652_10072620 | 3300025921 | Bacteria | 2992 |
| 108 | Ga0207652_10166728 | 3300025921 | Bacteria | 1975 |
| 109 | Ga0207694_10000018 | 3300025924 | Bacteria | 331281 |
| 110 | Ga0207650_10128761 | 3300025925 | Bacteria | 1979 |
| 111 | Ga0207650_10182291 | 3300025925 | Bacteria | 1674 |
| 112 | Ga0207659_10071627 | 3300025926 | Bacteria | 2531 |
| 113 | Ga0207690_10010442 | 3300025932 | Bacteria | 5519 |
| 114 | Ga0207706_10120225 | 3300025933 | Bacteria | 2309 |
| 115 | Ga0207686_10030965 | 3300025934 | Bacteria | 3173 |
| 116 | Ga0207686_10050322 | 3300025934 | Bacteria | 2590 |
| 117 | Ga0207709_10002616 | 3300025935 | Bacteria | 11209 |
| 118 | Ga0207670_10051270 | 3300025936 | Bacteria | 2770 |
| 119 | Ga0207704_10012413 | 3300025938 | Bacteria | 4230 |
| 120 | Ga0207711_10267444 | 3300025941 | Bacteria | 1572 |
| 121 | Ga0207689_10014684 | 3300025942 | Bacteria | 6650 |
| 122 | Ga0207661_10041526 | 3300025944 | Bacteria | 3622 |
| 123 | Ga0207651_10084595 | 3300025960 | Bacteria | 2298 |
| 124 | Ga0207658_10079023 | 3300025986 | Bacteria | 2515 |
| 125 | Ga0207658_10186132 | 3300025986 | Bacteria | 1722 |
| 126 | Ga0207703_10183327 | 3300026035 | Bacteria | 1849 |
| 127 | Ga0207639_10031952 | 3300026041 | Bacteria | 3872 |
| 128 | Ga0207678_10486676 | 3300026067 | Bacteria | 1075 |
| 129 | Ga0207648_10007077 | 3300026089 | Bacteria | 11071 |
| 130 | Ga0207648_10053215 | 3300026089 | Bacteria | 3538 |
| 131 | Ga0207676_10308174 | 3300026095 | Bacteria | 1448 |
| 132 | Ga0207676_10370525 | 3300026095 | Bacteria | 1330 |
| 133 | Ga0207675_100056826 | 3300026118 | Bacteria | 3650 |
| 134 | Ga0207683_10008754 | 3300026121 | Bacteria | 8640 |
| 135 | Ga0207683_10123367 | 3300026121 | Bacteria | 2327 |
| 136 | Ga0207698_10019258 | 3300026142 | Bacteria | 4669 |
| 137 | Ga0207698_10031593 | 3300026142 | Bacteria | 3824 |
| 138 | Ga0207698_10188858 | 3300026142 | Bacteria | 1833 |
| 139 | Ga0268266_10009591 | 3300028379 | Bacteria | 8513 |
| 140 | Ga0268266_10045763 | 3300028379 | Bacteria | 3744 |
| 141 | Ga0268266_10050010 | 3300028379 | Bacteria | 3585 |
| 142 | Ga0268266_10063402 | 3300028379 | Bacteria | 3190 |
| 143 | Ga0268266_10272929 | 3300028379 | Bacteria | 1570 |
| 144 | Ga0268264_10173562 | 3300028381 | Bacteria | 1952 |
| 145 | Ga0268264_10186085 | 3300028381 | Bacteria | 1890 |
| 146 | Ga0265338_10067259 | 3300028800 | Bacteria | 3095 |
| 147 | Ga0265338_10207614 | 3300028800 | Bacteria | 1472 |
| 148 | Ga0265332_10116471 | 3300031238 | Bacteria | 1123 |
| 149 | Ga0265325_10000251 | 3300031241 | Bacteria | 38232 |
| 150 | Ga0265339_10027245 | 3300031249 | Bacteria | 3263 |
| 151 | Ga0265316_10063865 | 3300031344 | Bacteria | 2854 |
| 152 | Ga0265313_10019273 | 3300031595 | Bacteria | 3802 |
| 153 | Ga0373939_0057550 | 3300035114 | Bacteria | 1227 |
| 154 | Ga0395901_0091930 | 3300038443 | Bacteria | 3176 |
| 155 | Ga0436361_0778529 | 3300039447 | Bacteria | 39434 |
| 156 | Ga0466968_0115075 | 3300044735 | Bacteria | 1212 |
| 157 | Ga0495662_0173340 | 3300046476 | Bacteria | 1063 |
| 158 | Ga0495672_0198129 | 3300047320 | Bacteria | 1006 |
| 159 | Ga0496107_0056721 | 3300048910 | Bacteria | 2830 |
| 160 | Ga0496111_0012955 | 3300048914 | Bacteria | 5660 |
| 161 | Ga0496121_0001770 | 3300048924 | Bacteria | 35109 |
| 162 | Ga0496126_0055070 | 3300048929 | Bacteria | 3600 |
| 163 | Ga0501031_0008227 | 3300049568 | Bacteria | 6785 |
| 164 | Ga0501033_0004979 | 3300049570 | Bacteria | 10561 |
| 165 | Ga0501033_0015317 | 3300049570 | Bacteria | 5817 |
| 166 | Ga0501033_0017559 | 3300049570 | Bacteria | 5405 |
| 167 | Ga0501033_0033095 | 3300049570 | Bacteria | 3882 |
| 168 | Ga0501033_0195390 | 3300049570 | Bacteria | 1447 |
| 169 | Ga0501033_0209997 | 3300049570 | Bacteria | 1388 |
| 170 | Ga0501036_0000713 | 3300049572 | Bacteria | 24611 |
| 171 | Ga0501036_0157282 | 3300049572 | Bacteria | 1917 |
| 172 | Ga0501037_0010956 | 3300049573 | Bacteria | 6666 |
| 173 | Ga0501037_0142863 | 3300049573 | Bacteria | 1712 |
| 174 | Ga0501038_0023019 | 3300049574 | Bacteria | 5576 |
| 175 | Ga0501038_0071392 | 3300049574 | Bacteria | 2945 |
| 176 | Ga0501038_0281771 | 3300049574 | Bacteria | 1308 |
| 177 | Ga0501039_0008655 | 3300049575 | Bacteria | 7753 |
| 178 | Ga0501043_0045238 | 3300049579 | Bacteria | 3462 |
| 179 | Ga0501043_0297745 | 3300049579 | Bacteria | 1233 |
| 180 | Ga0501046_0000010 | 3300049580 | Bacteria | 331082 |
| 181 | Ga0501046_0020535 | 3300049580 | Bacteria | 5460 |
| 182 | Ga0501047_0027656 | 3300049581 | Bacteria | 5464 |
| 183 | Ga0501047_0030960 | 3300049581 | Bacteria | 5158 |
| 184 | Ga0501047_0037394 | 3300049581 | Bacteria | 4694 |
| 185 | Ga0501047_0053805 | 3300049581 | Bacteria | 3894 |
| 186 | Ga0501047_0091990 | 3300049581 | Bacteria | 2912 |
| 187 | Ga0501047_0141455 | 3300049581 | Bacteria | 2285 |
| 188 | Ga0501047_0315464 | 3300049581 | Bacteria | 1404 |
| 189 | Ga0501067_0000480 | 3300049583 | Bacteria | 21781 |
| 190 | Ga0501069_0004739 | 3300049585 | Bacteria | 7037 |
| 191 | Ga0501070_0018838 | 3300049586 | Bacteria | 5791 |
| 192 | Ga0501073_0019128 | 3300049589 | Bacteria | 4948 |
| 193 | Ga0501073_0112885 | 3300049589 | Bacteria | 1885 |
| 194 | Ga0501074_0003538 | 3300049590 | Bacteria | 11081 |
| 195 | Ga0501079_0025804 | 3300049741 | Bacteria | 4507 |
| 196 | Ga0501080_0285191 | 3300049742 | Bacteria | 1500 |
| 197 | Ga0501080_0414867 | 3300049742 | Bacteria | 1210 |
| 198 | Ga0501083_0001092 | 3300049744 | Bacteria | 18154 |
| 199 | Ga0501083_0036301 | 3300049744 | Bacteria | 3362 |
| 200 | Ga0501035_0015340 | 3300049822 | Bacteria | 7073 |
| 201 | Ga0501035_0050931 | 3300049822 | Bacteria | 3709 |
| 202 | Ga0501044_0002004 | 3300049823 | Bacteria | 23483 |
| 203 | Ga0501044_0002832 | 3300049823 | Bacteria | 19738 |
| 204 | Ga0501044_0017153 | 3300049823 | Bacteria | 7770 |
| 205 | Ga0501044_0024450 | 3300049823 | Bacteria | 6410 |
| 206 | Ga0501044_0437501 | 3300049823 | Bacteria | 1216 |
| 207 | Ga0501045_0034604 | 3300049824 | Bacteria | 3667 |
| 208 | Ga0500595_000643 | 3300053119 | Bacteria | 20976 |
| 209 | Ga0500595_008819 | 3300053119 | Bacteria | 4099 |
| 210 | Ga0500559_0021241 | 3300053136 | Bacteria | 2750 |
| 211 | Ga0500573_0000012 | 3300053140 | Bacteria | 208486 |
| 212 | Ga0501084_0000329 | 3300054114 | Bacteria | 36197 |
| 213 | Ga0501084_0248075 | 3300054114 | Bacteria | 1503 |
| 214 | Ga0501082_0000918 | 3300060353 | Bacteria | 25948 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300005344 | Ga0070661_100051452 | Ga0070661_1000514522 | 265 |
| 2 | 3300025920 | Ga0207649_10039347 | Ga0207649_100393472 | 265 |
| 3 | 3300049580 | Ga0501046_0000010 | Ga0501046_0000010_130253_131140 | 268 |
| 4 | 3300005330 | Ga0070690_100038612 | Ga0070690_1000386122 | 272 |
| 5 | 3300005331 | Ga0070670_100315085 | Ga0070670_1003150852 | 272 |
| 6 | 3300005340 | Ga0070689_100292049 | Ga0070689_1002920492 | 272 |
| 7 | 3300005365 | Ga0070688_100170121 | Ga0070688_1001701212 | 272 |
| 8 | 3300005843 | Ga0068860_100158864 | Ga0068860_1001588643 | 272 |
| 9 | 3300009177 | Ga0105248_10070891 | Ga0105248_100708914 | 272 |
| 10 | 3300014325 | Ga0163163_10001320 | Ga0163163_100013204 | 272 |
| 11 | 3300014968 | Ga0157379_10058131 | Ga0157379_100581312 | 272 |
| 12 | 3300025936 | Ga0207670_10051270 | Ga0207670_100512702 | 272 |
| 13 | 3300025986 | Ga0207658_10079023 | Ga0207658_100790232 | 272 |
| 14 | 3300026067 | Ga0207678_10486676 | Ga0207678_104866761 | 272 |
| 15 | 3300028381 | Ga0268264_10186085 | Ga0268264_101860853 | 272 |
| 16 | 3300048910 | Ga0496107_0056721 | Ga0496107_0056721_951_1826 | 272 |
| 17 | 3300048914 | Ga0496111_0012955 | Ga0496111_0012955_3363_4238 | 272 |
| 18 | iso_pu_bacteria | 2889306138 | 2889310489 | 273 |
| 19 | iso_pu_bacteria | 2861691609 | 2861693630 | 274 |
| 20 | 3300021361 | Ga0213872_10000278 | Ga0213872_1000027830 | 275 |
| 21 | 3300039447 | Ga0436361_0778529 | Ga0436361_0778529_20066_20935 | 275 |
| 22 | 3300044735 | Ga0466968_0115075 | Ga0466968_0115075_265_1137 | 275 |
| 23 | 3300010375 | Ga0105239_10004412 | Ga0105239_1000441214 | 277 |
| 24 | 3300028800 | Ga0265338_10207614 | Ga0265338_102076142 | 278 |
| 25 | iso_pu_bacteria | 2889790730 | 2889791250 | 278 |
| 26 | iso_pu_bacteria | 2889914905 | 2889920293 | 278 |
| 27 | 3300005539 | Ga0068853_100043182 | Ga0068853_1000431822 | 279 |
| 28 | 3300005616 | Ga0068852_100062647 | Ga0068852_1000626472 | 279 |
| 29 | 3300005616 | Ga0068852_100128416 | Ga0068852_1001284162 | 279 |
| 30 | 3300010375 | Ga0105239_10012007 | Ga0105239_100120073 | 279 |
| 31 | 3300013105 | Ga0157369_10023093 | Ga0157369_100230932 | 279 |
| 32 | 3300013105 | Ga0157369_10040843 | Ga0157369_100408436 | 279 |
| 33 | 3300025924 | Ga0207694_10000018 | Ga0207694_10000018228 | 279 |
| 34 | 3300025944 | Ga0207661_10041526 | Ga0207661_100415265 | 279 |
| 35 | 3300026041 | Ga0207639_10031952 | Ga0207639_100319523 | 279 |
| 36 | 3300026142 | Ga0207698_10019258 | Ga0207698_100192584 | 279 |
| 37 | 3300026142 | Ga0207698_10031593 | Ga0207698_100315932 | 279 |
| 38 | 3300047320 | Ga0495672_0198129 | Ga0495672_0198129_11_862 | 279 |
| 39 | 3300009093 | Ga0105240_10006282 | Ga0105240_100062828 | 281 |
| 40 | 3300025913 | Ga0207695_10002278 | Ga0207695_1000227811 | 281 |
| 41 | iso_pu_bacteria | 2883291878 | 2883292722 | 281 |
| 42 | 3300009545 | Ga0105237_10323071 | Ga0105237_103230712 | 282 |
| 43 | 3300028800 | Ga0265338_10067259 | Ga0265338_100672591 | 283 |
| 44 | 3300049570 | Ga0501033_0004979 | Ga0501033_0004979_1918_2817 | 283 |
| 45 | 3300005458 | Ga0070681_10412156 | Ga0070681_104121561 | 284 |
| 46 | 3300025912 | Ga0207707_10388041 | Ga0207707_103880411 | 284 |
| 47 | 3300014968 | Ga0157379_10367568 | Ga0157379_103675682 | 285 |
| 48 | 3300006237 | Ga0097621_100194107 | Ga0097621_1001941072 | 286 |
| 49 | 3300025934 | Ga0207686_10050322 | Ga0207686_100503222 | 288 |
| 50 | 3300035114 | Ga0373939_0057550 | Ga0373939_0057550_218_1129 | 288 |
| 51 | 3300049570 | Ga0501033_0015317 | Ga0501033_0015317_4489_5421 | 288 |
| 52 | 3300049570 | Ga0501033_0195390 | Ga0501033_0195390_350_1261 | 288 |
| 53 | 3300049581 | Ga0501047_0053805 | Ga0501047_0053805_321_1253 | 288 |
| 54 | 3300049581 | Ga0501047_0315464 | Ga0501047_0315464_325_1236 | 288 |
| 55 | 3300049742 | Ga0501080_0285191 | Ga0501080_0285191_334_1266 | 288 |
| 56 | 3300049823 | Ga0501044_0017153 | Ga0501044_0017153_2734_3666 | 288 |
| 57 | 3300049823 | Ga0501044_0437501 | Ga0501044_0437501_23_934 | 288 |
| 58 | 3300006237 | Ga0097621_100000351 | Ga0097621_1000003517 | 294 |
| 59 | 3300006358 | Ga0068871_100000292 | Ga0068871_10000029230 | 294 |
| 60 | 3300009093 | Ga0105240_10120724 | Ga0105240_101207242 | 295 |
| 61 | 3300025921 | Ga0207652_10072620 | Ga0207652_100726202 | 295 |
| 62 | 3300048929 | Ga0496126_0055070 | Ga0496126_0055070_2479_3375 | 295 |
| 63 | 3300049570 | Ga0501033_0033095 | Ga0501033_0033095_2571_3482 | 295 |
| 64 | 3300049573 | Ga0501037_0142863 | Ga0501037_0142863_138_1049 | 295 |
| 65 | 3300049579 | Ga0501043_0045238 | Ga0501043_0045238_174_1085 | 295 |
| 66 | 3300049581 | Ga0501047_0027656 | Ga0501047_0027656_4164_5075 | 295 |
| 67 | 3300049823 | Ga0501044_0002832 | Ga0501044_0002832_11025_11936 | 295 |
| 68 | 3300003215 | JGI25153J46596_10000607 | JGI25153J46596_100006073 | 296 |
| 69 | 3300003320 | rootH2_10226966 | rootH2_102269663 | 296 |
| 70 | 3300005328 | Ga0070676_10011433 | Ga0070676_100114332 | 296 |
| 71 | 3300005334 | Ga0068869_100013882 | Ga0068869_1000138823 | 296 |
| 72 | 3300005335 | Ga0070666_10014574 | Ga0070666_100145743 | 296 |
| 73 | 3300005336 | Ga0070680_100272630 | Ga0070680_1002726302 | 296 |
| 74 | 3300005338 | Ga0068868_100067425 | Ga0068868_1000674252 | 296 |
| 75 | 3300005338 | Ga0068868_100106467 | Ga0068868_1001064672 | 296 |
| 76 | 3300005339 | Ga0070660_100138553 | Ga0070660_1001385532 | 296 |
| 77 | 3300005355 | Ga0070671_100065811 | Ga0070671_1000658111 | 296 |
| 78 | 3300005364 | Ga0070673_100014496 | Ga0070673_1000144963 | 296 |
| 79 | 3300005366 | Ga0070659_100030160 | Ga0070659_1000301602 | 296 |
| 80 | 3300005367 | Ga0070667_100116672 | Ga0070667_1001166722 | 296 |
| 81 | 3300005367 | Ga0070667_100173855 | Ga0070667_1001738553 | 296 |
| 82 | 3300005456 | Ga0070678_100007838 | Ga0070678_1000078386 | 296 |
| 83 | 3300005456 | Ga0070678_100104639 | Ga0070678_1001046392 | 296 |
| 84 | 3300005457 | Ga0070662_100118013 | Ga0070662_1001180131 | 296 |
| 85 | 3300005458 | Ga0070681_10246335 | Ga0070681_102463352 | 296 |
| 86 | 3300005459 | Ga0068867_100004006 | Ga0068867_10000400610 | 296 |
| 87 | 3300005459 | Ga0068867_100021331 | Ga0068867_1000213313 | 296 |
| 88 | 3300005530 | Ga0070679_100069647 | Ga0070679_1000696472 | 296 |
| 89 | 3300005539 | Ga0068853_100377783 | Ga0068853_1003777831 | 296 |
| 90 | 3300005548 | Ga0070665_100000656 | Ga0070665_10000065632 | 296 |
| 91 | 3300005548 | Ga0070665_100017420 | Ga0070665_1000174202 | 296 |
| 92 | 3300005548 | Ga0070665_100021846 | Ga0070665_1000218463 | 296 |
| 93 | 3300005548 | Ga0070665_100159622 | Ga0070665_1001596222 | 296 |
| 94 | 3300005548 | Ga0070665_100223529 | Ga0070665_1002235292 | 296 |
| 95 | 3300005563 | Ga0068855_100034219 | Ga0068855_1000342193 | 296 |
| 96 | 3300005618 | Ga0068864_100208693 | Ga0068864_1002086932 | 296 |
| 97 | 3300005834 | Ga0068851_10065738 | Ga0068851_100657382 | 296 |
| 98 | 3300005840 | Ga0068870_10021743 | Ga0068870_100217432 | 296 |
| 99 | 3300005840 | Ga0068870_10276918 | Ga0068870_102769182 | 296 |
| 100 | 3300005841 | Ga0068863_100071995 | Ga0068863_1000719952 | 296 |
| 101 | 3300005842 | Ga0068858_100017014 | Ga0068858_1000170143 | 296 |
| 102 | 3300005842 | Ga0068858_100126662 | Ga0068858_1001266623 | 296 |
| 103 | 3300005842 | Ga0068858_100552654 | Ga0068858_1005526541 | 296 |
| 104 | 3300005843 | Ga0068860_100025342 | Ga0068860_1000253422 | 296 |
| 105 | 3300005843 | Ga0068860_100203537 | Ga0068860_1002035372 | 296 |
| 106 | 3300006237 | Ga0097621_100022167 | Ga0097621_1000221672 | 296 |
| 107 | 3300006237 | Ga0097621_100297091 | Ga0097621_1002970912 | 296 |
| 108 | 3300006358 | Ga0068871_100020670 | Ga0068871_1000206705 | 296 |
| 109 | 3300006358 | Ga0068871_100040339 | Ga0068871_1000403392 | 296 |
| 110 | 3300006358 | Ga0068871_100070813 | Ga0068871_1000708132 | 296 |
| 111 | 3300006881 | Ga0068865_100009948 | Ga0068865_1000099482 | 296 |
| 112 | 3300009093 | Ga0105240_10055083 | Ga0105240_100550835 | 296 |
| 113 | 3300009093 | Ga0105240_10417570 | Ga0105240_104175702 | 296 |
| 114 | 3300009098 | Ga0105245_10163748 | Ga0105245_101637482 | 296 |
| 115 | 3300009148 | Ga0105243_10001141 | Ga0105243_100011416 | 296 |
| 116 | 3300009177 | Ga0105248_10057586 | Ga0105248_100575862 | 296 |
| 117 | 3300009177 | Ga0105248_10156408 | Ga0105248_101564083 | 296 |
| 118 | 3300010375 | Ga0105239_10265554 | Ga0105239_102655542 | 296 |
| 119 | 3300011119 | Ga0105246_10016358 | Ga0105246_100163585 | 296 |
| 120 | 3300011119 | Ga0105246_10246239 | Ga0105246_102462392 | 296 |
| 121 | 3300013102 | Ga0157371_10124681 | Ga0157371_101246812 | 296 |
| 122 | 3300013297 | Ga0157378_10039799 | Ga0157378_100397992 | 296 |
| 123 | 3300013297 | Ga0157378_10140825 | Ga0157378_101408252 | 296 |
| 124 | 3300013297 | Ga0157378_10177577 | Ga0157378_101775772 | 296 |
| 125 | 3300013297 | Ga0157378_10259944 | Ga0157378_102599442 | 296 |
| 126 | 3300013306 | Ga0163162_10018934 | Ga0163162_100189346 | 296 |
| 127 | 3300013306 | Ga0163162_10052870 | Ga0163162_100528703 | 296 |
| 128 | 3300014325 | Ga0163163_10000006 | Ga0163163_1000000672 | 296 |
| 129 | 3300014325 | Ga0163163_10018402 | Ga0163163_100184025 | 296 |
| 130 | 3300014325 | Ga0163163_10204466 | Ga0163163_102044662 | 296 |
| 131 | 3300014968 | Ga0157379_10289485 | Ga0157379_102894852 | 296 |
| 132 | 3300014969 | Ga0157376_10035176 | Ga0157376_100351762 | 296 |
| 133 | 3300017792 | Ga0163161_10006284 | Ga0163161_100062843 | 296 |
| 134 | 3300025297 | Ga0209758_1000013 | Ga0209758_1000013792 | 296 |
| 135 | 3300025899 | Ga0207642_10035092 | Ga0207642_100350922 | 296 |
| 136 | 3300025901 | Ga0207688_10082483 | Ga0207688_100824832 | 296 |
| 137 | 3300025903 | Ga0207680_10043308 | Ga0207680_100433083 | 296 |
| 138 | 3300025903 | Ga0207680_10100487 | Ga0207680_101004872 | 296 |
| 139 | 3300025909 | Ga0207705_10098248 | Ga0207705_100982482 | 296 |
| 140 | 3300025912 | Ga0207707_10300540 | Ga0207707_103005402 | 296 |
| 141 | 3300025912 | Ga0207707_10317734 | Ga0207707_103177341 | 296 |
| 142 | 3300025913 | Ga0207695_10290498 | Ga0207695_102904982 | 296 |
| 143 | 3300025913 | Ga0207695_10479114 | Ga0207695_104791142 | 296 |
| 144 | 3300025917 | Ga0207660_10103929 | Ga0207660_101039292 | 296 |
| 145 | 3300025919 | Ga0207657_10056440 | Ga0207657_100564403 | 296 |
| 146 | 3300025921 | Ga0207652_10166728 | Ga0207652_101667282 | 296 |
| 147 | 3300025925 | Ga0207650_10128761 | Ga0207650_101287612 | 296 |
| 148 | 3300025925 | Ga0207650_10182291 | Ga0207650_101822913 | 296 |
| 149 | 3300025926 | Ga0207659_10071627 | Ga0207659_100716272 | 296 |
| 150 | 3300025932 | Ga0207690_10010442 | Ga0207690_100104422 | 296 |
| 151 | 3300025933 | Ga0207706_10120225 | Ga0207706_101202252 | 296 |
| 152 | 3300025934 | Ga0207686_10030965 | Ga0207686_100309652 | 296 |
| 153 | 3300025935 | Ga0207709_10002616 | Ga0207709_100026167 | 296 |
| 154 | 3300025938 | Ga0207704_10012413 | Ga0207704_100124132 | 296 |
| 155 | 3300025941 | Ga0207711_10267444 | Ga0207711_102674442 | 296 |
| 156 | 3300025942 | Ga0207689_10014684 | Ga0207689_100146843 | 296 |
| 157 | 3300025960 | Ga0207651_10084595 | Ga0207651_100845951 | 296 |
| 158 | 3300025986 | Ga0207658_10186132 | Ga0207658_101861321 | 296 |
| 159 | 3300026035 | Ga0207703_10183327 | Ga0207703_101833271 | 296 |
| 160 | 3300026089 | Ga0207648_10007077 | Ga0207648_1000707710 | 296 |
| 161 | 3300026089 | Ga0207648_10053215 | Ga0207648_100532152 | 296 |
| 162 | 3300026095 | Ga0207676_10308174 | Ga0207676_103081742 | 296 |
| 163 | 3300026095 | Ga0207676_10370525 | Ga0207676_103705252 | 296 |
| 164 | 3300026118 | Ga0207675_100056826 | Ga0207675_1000568264 | 296 |
| 165 | 3300026121 | Ga0207683_10008754 | Ga0207683_100087546 | 296 |
| 166 | 3300026121 | Ga0207683_10123367 | Ga0207683_101233672 | 296 |
| 167 | 3300026142 | Ga0207698_10188858 | Ga0207698_101888582 | 296 |
| 168 | 3300028379 | Ga0268266_10009591 | Ga0268266_100095914 | 296 |
| 169 | 3300028379 | Ga0268266_10045763 | Ga0268266_100457635 | 296 |
| 170 | 3300028379 | Ga0268266_10050010 | Ga0268266_100500102 | 296 |
| 171 | 3300028379 | Ga0268266_10063402 | Ga0268266_100634024 | 296 |
| 172 | 3300028379 | Ga0268266_10272929 | Ga0268266_102729292 | 296 |
| 173 | 3300028381 | Ga0268264_10173562 | Ga0268264_101735622 | 296 |
| 174 | 3300031238 | Ga0265332_10116471 | Ga0265332_101164712 | 296 |
| 175 | 3300031241 | Ga0265325_10000251 | Ga0265325_1000025128 | 296 |
| 176 | 3300031249 | Ga0265339_10027245 | Ga0265339_100272452 | 296 |
| 177 | 3300031344 | Ga0265316_10063865 | Ga0265316_100638652 | 296 |
| 178 | 3300031595 | Ga0265313_10019273 | Ga0265313_100192732 | 296 |
| 179 | 3300038443 | Ga0395901_0091930 | Ga0395901_0091930_106_1005 | 296 |
| 180 | 3300046476 | Ga0495662_0173340 | Ga0495662_0173340_70_999 | 296 |
| 181 | 3300048924 | Ga0496121_0001770 | Ga0496121_0001770_731_1630 | 296 |
| 182 | 3300049568 | Ga0501031_0008227 | Ga0501031_0008227_2626_3558 | 296 |
| 183 | 3300049570 | Ga0501033_0017559 | Ga0501033_0017559_2451_3383 | 296 |
| 184 | 3300049570 | Ga0501033_0209997 | Ga0501033_0209997_412_1311 | 296 |
| 185 | 3300049572 | Ga0501036_0000713 | Ga0501036_0000713_3768_4700 | 296 |
| 186 | 3300049572 | Ga0501036_0157282 | Ga0501036_0157282_616_1533 | 296 |
| 187 | 3300049573 | Ga0501037_0010956 | Ga0501037_0010956_2589_3521 | 296 |
| 188 | 3300049574 | Ga0501038_0023019 | Ga0501038_0023019_4074_5006 | 296 |
| 189 | 3300049574 | Ga0501038_0071392 | Ga0501038_0071392_17_934 | 296 |
| 190 | 3300049574 | Ga0501038_0281771 | Ga0501038_0281771_153_1052 | 296 |
| 191 | 3300049575 | Ga0501039_0008655 | Ga0501039_0008655_3497_4429 | 296 |
| 192 | 3300049579 | Ga0501043_0297745 | Ga0501043_0297745_207_1124 | 296 |
| 193 | 3300049580 | Ga0501046_0020535 | Ga0501046_0020535_2734_3666 | 296 |
| 194 | 3300049581 | Ga0501047_0030960 | Ga0501047_0030960_1018_1950 | 296 |
| 195 | 3300049581 | Ga0501047_0037394 | Ga0501047_0037394_1770_2669 | 296 |
| 196 | 3300049581 | Ga0501047_0091990 | Ga0501047_0091990_1328_2227 | 296 |
| 197 | 3300049581 | Ga0501047_0141455 | Ga0501047_0141455_852_1751 | 296 |
| 198 | 3300049583 | Ga0501067_0000480 | Ga0501067_0000480_1651_2583 | 296 |
| 199 | 3300049585 | Ga0501069_0004739 | Ga0501069_0004739_4842_5774 | 296 |
| 200 | 3300049586 | Ga0501070_0018838 | Ga0501070_0018838_3209_4141 | 296 |
| 201 | 3300049589 | Ga0501073_0019128 | Ga0501073_0019128_2589_3521 | 296 |
| 202 | 3300049589 | Ga0501073_0112885 | Ga0501073_0112885_875_1780 | 296 |
| 203 | 3300049590 | Ga0501074_0003538 | Ga0501074_0003538_3253_4185 | 296 |
| 204 | 3300049741 | Ga0501079_0025804 | Ga0501079_0025804_2899_3831 | 296 |
| 205 | 3300049742 | Ga0501080_0414867 | Ga0501080_0414867_249_1154 | 296 |
| 206 | 3300049744 | Ga0501083_0001092 | Ga0501083_0001092_13666_14598 | 296 |
| 207 | 3300049744 | Ga0501083_0036301 | Ga0501083_0036301_2438_3343 | 296 |
| 208 | 3300049822 | Ga0501035_0015340 | Ga0501035_0015340_2264_3163 | 296 |
| 209 | 3300049822 | Ga0501035_0050931 | Ga0501035_0050931_1519_2424 | 296 |
| 210 | 3300049823 | Ga0501044_0002004 | Ga0501044_0002004_21046_21945 | 296 |
| 211 | 3300049823 | Ga0501044_0024450 | Ga0501044_0024450_2451_3383 | 296 |
| 212 | 3300049824 | Ga0501045_0034604 | Ga0501045_0034604_125_1057 | 296 |
| 213 | 3300053119 | Ga0500595_000643 | Ga0500595_000643_3740_4639 | 296 |
| 214 | 3300053119 | Ga0500595_008819 | Ga0500595_008819_632_1567 | 296 |
| 215 | 3300053136 | Ga0500559_0021241 | Ga0500559_0021241_1076_2002 | 296 |
| 216 | 3300053140 | Ga0500573_0000012 | Ga0500573_0000012_201881_202780 | 296 |
| 217 | 3300054114 | Ga0501084_0000329 | Ga0501084_0000329_5690_6622 | 296 |
| 218 | 3300054114 | Ga0501084_0248075 | Ga0501084_0248075_290_1195 | 296 |
| 219 | 3300060353 | Ga0501082_0000918 | Ga0501082_0000918_11990_12922 | 296 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3pyf-assembly1.cif.gz_A | mycobacterium tuberculosis 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase (ispe) in complex with amp-pnp | 0.8741 | 1 | 279 |
| 4emd-assembly1.cif.gz_A | crystal structure of ispe (4-diphosphocytidyl-2-c-methyl-d-erythritol kinase) from mycobacterium abcessus, bound to cmp and so4 | 0.8495 | 2 | 283 |
| 4ed4-assembly1.cif.gz_A | crystal structure of ispe (4-diphosphocytidyl-2-c-methyl-d-erythritol kinase) from mycobacterium abcessus, bound to atp | 0.8463 | 3 | 279 |
| 1uek-assembly1.cif.gz_A | crystal structure of 4-(cytidine 5'-diphospho)-2c-methyl-d-erythritol kinase | 0.8129 | 2 | 276 |
| 4emd-assembly1.cif.gz_A | crystal structure of ispe (4-diphosphocytidyl-2-c-methyl-d-erythritol kinase) from mycobacterium abcessus, bound to cmp and so4 | 0.8082 | 2 | 283 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 4dxlA01 | Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; | 0.9333 | 2 | 147 | 3.30.230.10 |
| af_Q2G0S8_1_157_3.30.230.10 | Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; | 0.9013 | 1 | 150 | 3.30.230.10 |
| af_Q8S2G0_72_245_3.30.230.10 | Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; | 0.8864 | 2 | 150 | 3.30.230.10 |
| af_Q2G0S8_1_157_3.30.230.10 | Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; | 0.8579 | 1 | 150 | 3.30.230.10 |
| 1oj4B01 | Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; | 0.8512 | 1 | 150 | 3.30.230.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A2E3K930-F1-model_v4 | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) | 0.9673 | 2 | 276 |
GO:0005524
GO:0016114 GO:0019288 GO:0050515 |
| AF-A0A2M7ERP8-F1-model_v4 | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) | 0.9611 | 2 | 276 |
GO:0005524
GO:0016114 GO:0019288 GO:0050515 |
| AF-A0A367X228-F1-model_v4 | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) | 0.9578 | 2 | 276 |
GO:0005524
GO:0016114 GO:0019288 GO:0050515 |
| AF-A0A2E1HW41-F1-model_v4 | deleted | 0.9569 | 2 | 276 |
|
| AF-A0A3B1AA80-F1-model_v4 | 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) | 0.9559 | 2 | 276 |
GO:0005524
GO:0016114 GO:0050515 |
Predicted Structure (AlphaFold2)
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