F331102

General Info

Members Datasets Scaffolds Average Seq Length
219 159 206 222

Family's Representative Sequence

Representative Sequence 3300013307|Ga0157372_10139168|Ga0157372_101391681
Length 243
Sequence MTIAGLRFDEGAEGRQPSGLPPLKFDALIFDFDGVLLESEYAGNAQIAEYLTRIGHPTSAEESMARFMGLAGKDFIAALETYIGRPLPEDFHAARAEEDARVLAEGLDPVAGAIAFVRSLPDALPRAIASSSTTRWITTHLAHLGLADAFGTMIFSGREHVARGKPEPDVYLHAAAALGVPIERCAILEDSPVGATGAVASGAYVIGLAAGRHCPPEHEATLRAIGVDAVAHSFAEVAALLAA

Samples

Sample ID Description Type Environment
1 2599185359 Sphingomonas sp. NFR04 Isolate Rhizoplane
2 2643221622 Sphingomonas sp. Root241 Isolate Unclassified
3 2818991466 Sphingomonas trueperi 1152a Isolate Unclassified
4 2879163058 Sphingomonas pokkalii L3B27 Isolate Rhizosphere
5 2885429604 Sphingomonas sp. WZY 27 Isolate Rhizosphere
6 2928027323 Sphingomonas sp. 1185 Isolate Unclassified
7 2928526807 Sphingomonas trueperi 1770 Isolate Rhizosphere
8 2928968154 Sphingomonas trueperi 1075 Isolate Unclassified
9 2946787523 Sphingomonas faeni W4I17 Isolate Rhizosphere
10 2984555340 Sphingomonas sp. SORGH_AS789 Isolate Aerial Root
11 2984564862 Sphingomonas sp. SORGH_AS870 Isolate Aerial Root
12 2993356040 Sphingomonas sp. SORGH_AS742 Isolate Aerial Root
13 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
14 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
15 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
16 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
17 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
18 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
19 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
20 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
21 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
22 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
23 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
24 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
25 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
26 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
27 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
28 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
29 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
30 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
31 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
32 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
33 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
34 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
35 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
36 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
37 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
40 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
41 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
45 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
46 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
49 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
50 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
53 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
54 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
55 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
56 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
57 3300016635 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A10 Metagenome Rhizosphere
58 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
59 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
60 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
61 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
62 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
63 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
64 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
65 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
66 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
67 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
69 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
70 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
71 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
73 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
74 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
101 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
102 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
103 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
104 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
105 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
106 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
107 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
108 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
109 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
110 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
111 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
112 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
113 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
114 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
115 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
116 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
117 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
118 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
119 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
120 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
121 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
122 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
123 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
124 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
125 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
126 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
127 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
128 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
129 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
130 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
131 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
132 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
133 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
134 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
135 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
136 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
139 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
140 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
141 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
142 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
143 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
144 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
145 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
146 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
147 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
148 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
149 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
150 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
151 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
152 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
153 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
154 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
155 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
156 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
157 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
158 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
159 8057101203 Sphingomonas lycopersici MMSM20 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.06
Metatranscriptomes 0
Isolates 5.94

Biome Distribution

Category Percentage (%)
Aerial Root 1.37
Bulb 0
Endosphere 31.05
Nodule 0
Rhizoplane 0.46
Rhizosphere 56.16
Stem 0
Stem Tuber 0
Unclassified 10.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24737J22298_10020974 3300001990 Bacteria 2083
2 JGI24735J21928_10006929 3300002067 Bacteria 3708
3 JGI25150J39212_1000189 3300002774 Bacteria 34828
4 JGI25151J46595_10019372 3300003187 Bacteria 2892
5 JGI25153J46596_10000125 3300003215 Bacteria 86065
6 rootH2_10079609 3300003320 Bacteria 1899
7 rootH2_10186633 3300003320 Bacteria 1201
8 rootH1_10081980 3300003323 Bacteria 2329
9 Ga0055537_1004317 3300003773 Bacteria 4087
10 Ga0055537_1004531 3300003773 Bacteria 3959
11 Ga0055524_1000387 3300003775 Bacteria 37906
12 Ga0055536_1005046 3300003781 Bacteria 6557
13 Ga0055530_10001385 3300003791 Bacteria 17950
14 Ga0055530_10010246 3300003791 Bacteria 3491
15 Ga0055530_10057467 3300003791 Bacteria 879
16 Ga0055540_1001895 3300003792 Bacteria 11716
17 Ga0055531_10007918 3300003794 Bacteria 5701
18 Ga0065165_1005864 3300005262 Bacteria 6678
19 Ga0065165_1052601 3300005262 Bacteria 1150
20 Ga0065165_1055871 3300005262 Bacteria 1100
21 Ga0070658_10232122 3300005327 Bacteria 1562
22 Ga0070670_100136910 3300005331 Bacteria 2116
23 Ga0068868_100420010 3300005338 Bacteria 1158
24 Ga0070689_100294581 3300005340 Bacteria 1349
25 Ga0070661_100008218 3300005344 Bacteria 7201
26 Ga0070667_100235329 3300005367 Bacteria 1634
27 Ga0070667_100292048 3300005367 Bacteria 1466
28 Ga0068853_100221824 3300005539 Bacteria 1727
29 Ga0068853_100601773 3300005539 Bacteria 1044
30 Ga0070672_100313214 3300005543 Bacteria 1333
31 Ga0070665_100295926 3300005548 Bacteria 1621
32 Ga0070665_101007886 3300005548 Bacteria 845
33 Ga0068857_100009232 3300005577 Bacteria 8555
34 Ga0068854_100132298 3300005578 Bacteria 1906
35 Ga0068859_100485453 3300005617 Bacteria 1331
36 Ga0068864_100000145 3300005618 Bacteria 68040
37 Ga0068861_100307166 3300005719 Bacteria 1376
38 Ga0068863_100007065 3300005841 Bacteria 11003
39 Ga0068858_100000268 3300005842 Bacteria 55747
40 Ga0068858_100005711 3300005842 Bacteria 12156
41 Ga0068860_100000391 3300005843 Bacteria 57332
42 Ga0068862_100000014 3300005844 Bacteria 251552
43 Ga0081540_1025034 3300005983 Bacteria 3447
44 Ga0068865_100714935 3300006881 Bacteria 857
45 Ga0097620_100485418 3300006931 Bacteria 1331
46 Ga0105245_10012492 3300009098 Bacteria 7389
47 Ga0105247_10503720 3300009101 Bacteria 883
48 Ga0105243_10229573 3300009148 Bacteria 1646
49 Ga0105237_10072362 3300009545 Bacteria 3441
50 Ga0105238_10054617 3300009551 Bacteria 4011
51 Ga0157371_10159228 3300013102 Bacteria 1612
52 Ga0163162_10007635 3300013306 Bacteria 10535
53 Ga0163162_10305368 3300013306 Bacteria 1724
54 Ga0163162_11243698 3300013306 Bacteria 845
55 Ga0157372_10139168 3300013307 Bacteria 2796
56 Ga0183363_1003 3300015690 Bacteria 421263
57 Ga0183361_10364 3300016635 Bacteria 1901
58 Ga0163161_10282800 3300017792 Bacteria 1302
59 Ga0209437_102345 3300025233 Bacteria 3693
60 Ga0207425_1000005 3300025245 Bacteria 900502
61 Ga0207425_1017630 3300025245 Bacteria 1564
62 Ga0209026_1015791 3300025250 Bacteria 1233
63 Ga0209129_1000345 3300025258 Bacteria 39677
64 Ga0209233_1000044 3300025261 Bacteria 489783
65 Ga0209565_1000029 3300025263 Bacteria 340335
66 Ga0209565_1000052 3300025263 Bacteria 212056
67 Ga0209565_1009441 3300025263 Bacteria 2477
68 Ga0209673_1002174 3300025273 Bacteria 14467
69 Ga0209675_1015601 3300025291 Bacteria 2248
70 Ga0209676_1002411 3300025292 Bacteria 13359
71 Ga0209025_1001007 3300025294 Bacteria 41722
72 Ga0209564_1000866 3300025295 Bacteria 40332
73 Ga0209758_1000002 3300025297 Bacteria 1400310
74 Ga0209758_1002578 3300025297 Bacteria 18191
75 Ga0209050_1000001 3300025298 Bacteria 3563507
76 Ga0209050_1000167 3300025298 Bacteria 151608
77 Ga0209050_1003344 3300025298 Bacteria 11952
78 Ga0209050_1010674 3300025298 Bacteria 4484
79 Ga0209256_1000008 3300025299 Bacteria 975723
80 Ga0207426_1006259 3300025302 Bacteria 5210
81 Ga0209051_1000472 3300025303 Bacteria 52350
82 Ga0209257_1000028 3300025304 Bacteria 699493
83 Ga0209257_1007348 3300025304 Bacteria 6680
84 Ga0209257_1008326 3300025304 Bacteria 5936
85 Ga0209257_1011475 3300025304 Bacteria 4262
86 Ga0209257_1051906 3300025304 Bacteria 1153
87 Ga0207697_10020377 3300025315 Bacteria 2715
88 Ga0207710_10000920 3300025900 Bacteria 15715
89 Ga0207688_10007318 3300025901 Bacteria 6008
90 Ga0207705_10335018 3300025909 Bacteria 1164
91 Ga0207671_10002056 3300025914 Bacteria 22074
92 Ga0207681_10196593 3300025923 Bacteria 1546
93 Ga0207694_10001864 3300025924 Bacteria 17537
94 Ga0207687_10003478 3300025927 Bacteria 10598
95 Ga0207709_10206113 3300025935 Bacteria 1408
96 Ga0207711_10023229 3300025941 Bacteria 5190
97 Ga0207667_10292016 3300025949 Bacteria 1666
98 Ga0207651_10508942 3300025960 Bacteria 1042
99 Ga0207640_10005516 3300025981 Bacteria 6895
100 Ga0207640_10008805 3300025981 Bacteria 5616
101 Ga0207703_10000139 3300026035 Bacteria 86495
102 Ga0207703_10001170 3300026035 Bacteria 24778
103 Ga0207639_10286001 3300026041 Bacteria 1452
104 Ga0207639_10820777 3300026041 Bacteria 867
105 Ga0207678_10049430 3300026067 Bacteria 3634
106 Ga0207678_10227105 3300026067 Bacteria 1598
107 Ga0207641_10014184 3300026088 Bacteria 6530
108 Ga0207648_10011323 3300026089 Bacteria 8405
109 Ga0207676_10000072 3300026095 Bacteria 101978
110 Ga0207674_10019004 3300026116 Bacteria 7447
111 Ga0207675_100359121 3300026118 Bacteria 1429
112 Ga0268266_10177908 3300028379 Bacteria 1935
113 Ga0268265_10000048 3300028380 Bacteria 178523
114 Ga0268265_10040921 3300028380 Bacteria 3425
115 Ga0268265_10183456 3300028380 Bacteria 1800
116 Ga0268264_10000439 3300028381 Bacteria 57339
117 Ga0307513_10024624 3300031456 Bacteria 6998
118 Ga0307513_10036032 3300031456 Bacteria 5528
119 Ga0307513_10094621 3300031456 Bacteria 3032
120 Ga0307508_10000011 3300031616 Bacteria 248001
121 Ga0307412_10002381 3300031911 Bacteria 10439
122 Ga0307411_10151702 3300032005 Bacteria 1723
123 Ga0307510_10006144 3300033180 Bacteria 14310
124 Ga0395905_0046291 3300037471 Bacteria 4079
125 Ga0395905_0115923 3300037471 Bacteria 2517
126 Ga0237819_00449 3300038705 Bacteria 14026
127 Ga0436363_0095004 3300039450 Bacteria 903
128 Ga0439465_0002685 3300041413 Bacteria 5816
129 Ga0439465_0007821 3300041413 Bacteria 3387
130 Ga0439431_0000605 3300041997 Bacteria 7594
131 Ga0439431_0030157 3300041997 Bacteria 1342
132 Ga0439445_0012046 3300042004 Bacteria 2071
133 Ga0439445_0013425 3300042004 Bacteria 1982
134 Ga0439445_0050429 3300042004 Bacteria 1122
135 Ga0439432_000152 3300042006 Bacteria 23430
136 Ga0439452_010091 3300042010 Bacteria 2760
137 Ga0439452_039667 3300042010 Bacteria 1114
138 Ga0439457_076918 3300042014 Bacteria 765
139 Ga0439462_0005451 3300042015 Bacteria 3136
140 Ga0439462_0014846 3300042015 Bacteria 2004
141 Ga0439446_0014234 3300042156 Bacteria 2194
142 Ga0439446_0026404 3300042156 Bacteria 1664
143 Ga0439434_0002060 3300042435 Bacteria 5810
144 Ga0466971_0283392 3300044719 Bacteria 793
145 Ga0466967_0338805 3300045976 Bacteria 1454
146 Ga0495638_0001117 3300046460 Bacteria 26096
147 Ga0495638_0012273 3300046460 Bacteria 5878
148 Ga0495607_0033844 3300046501 Bacteria 3106
149 Ga0495583_0000212 3300046506 Bacteria 97784
150 Ga0495648_0056316 3300046524 Bacteria 2366
151 Ga0495648_0080093 3300046524 Bacteria 1862
152 Ga0495668_0005930 3300046616 Bacteria 8121
153 Ga0495668_0026139 3300046616 Bacteria 3314
154 Ga0495625_0000094 3300046660 Bacteria 144517
155 Ga0495625_0099075 3300046660 Bacteria 2004
156 Ga0495661_0061122 3300046665 Bacteria 2237
157 Ga0495670_0000016 3300046691 Bacteria 128045
158 Ga0495670_0003066 3300046691 Bacteria 8243
159 Ga0495670_0006420 3300046691 Bacteria 5774
160 Ga0495670_0039567 3300046691 Bacteria 2352
161 Ga0495677_0004007 3300047445 Bacteria 5687
162 Ga0495681_0041382 3300047470 Bacteria 2237
163 Ga0495686_0000139 3300047472 Bacteria 145796
164 Ga0495686_0011807 3300047472 Bacteria 6145
165 Ga0495686_0022109 3300047472 Bacteria 4210
166 Ga0496117_0162521 3300048920 Bacteria 1306
167 Ga0496119_0200740 3300048922 Bacteria 1032
168 Ga0496123_0152498 3300048926 Bacteria 1244
169 Ga0496123_0222615 3300048926 Bacteria 950
170 Ga0496124_0000675 3300048927 Bacteria 56113
171 Ga0496124_0008603 3300048927 Bacteria 10645
172 Ga0496124_0019209 3300048927 Bacteria 6372
173 Ga0496124_0363866 3300048927 Bacteria 1018
174 Ga0496126_0324462 3300048929 Bacteria 1265
175 Ga0495682_0017605 3300049460 Bacteria 2694
176 Ga0501036_0511462 3300049572 Bacteria 999
177 Ga0501047_0203115 3300049581 Bacteria 1842
178 Ga0501080_0606989 3300049742 Bacteria 971
179 Ga0501241_007518 3300049758 Bacteria 1994
180 Ga0501035_0218089 3300049822 Bacteria 1630
181 Ga0500643_005447 3300053087 Bacteria 5484
182 Ga0500566_0000712 3300053094 Bacteria 18710
183 Ga0500641_0001329 3300053096 Bacteria 8784
184 Ga0500555_001382 3300053103 Bacteria 7490
185 Ga0500556_0007181 3300053104 Bacteria 3182
186 Ga0500595_002588 3300053119 Bacteria 8836
187 Ga0500595_014084 3300053119 Bacteria 3044
188 Ga0500597_096234 3300053120 Bacteria 1286
189 Ga0500652_114311 3300053131 Bacteria 1128
190 Ga0500658_0000032 3300053134 Bacteria 90863
191 Ga0500658_0000189 3300053134 Bacteria 29335
192 Ga0500658_0002092 3300053134 Bacteria 7765
193 Ga0500559_0016668 3300053136 Bacteria 3104
194 Ga0500559_0032869 3300053136 Bacteria 2231
195 Ga0500559_0035943 3300053136 Bacteria 2141
196 Ga0500559_0125190 3300053136 Bacteria 1197
197 Ga0500559_0154804 3300053136 Bacteria 1076
198 Ga0500559_0211562 3300053136 Bacteria 914
199 Ga0500568_0006626 3300053139 Bacteria 5793
200 Ga0500573_0000290 3300053140 Bacteria 21357
201 Ga0500577_0061015 3300053142 Bacteria 1450
202 Ga0500616_0040888 3300053153 Bacteria 2491
203 Ga0500622_0140829 3300053156 Bacteria 1150
204 Ga0500624_000003 3300053157 Bacteria 253364
205 Ga0500638_212999 3300053162 Bacteria 808
206 Ga0500637_0000073 3300053178 Bacteria 35884

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046460 Ga0495638_0012273 Ga0495638_0012273_5013_5711 198
2 3300046506 Ga0495583_0000212 Ga0495583_0000212_81044_81742 198
3 3300046665 Ga0495661_0061122 Ga0495661_0061122_870_1568 198
4 3300046691 Ga0495670_0006420 Ga0495670_0006420_4893_5591 198
5 3300049460 Ga0495682_0017605 Ga0495682_0017605_587_1285 198
6 3300053103 Ga0500555_001382 Ga0500555_001382_4380_5078 198
7 3300047445 Ga0495677_0004007 Ga0495677_0004007_1036_1698 199
8 3300047472 Ga0495686_0000139 Ga0495686_0000139_6137_6817 208
9 3300005338 Ga0068868_100420010 Ga0068868_1004200102 213
10 3300005543 Ga0070672_100313214 Ga0070672_1003132142 213
11 3300005842 Ga0068858_100005711 Ga0068858_10000571110 213
12 3300006881 Ga0068865_100714935 Ga0068865_1007149352 213
13 3300009098 Ga0105245_10012492 Ga0105245_100124926 213
14 3300009148 Ga0105243_10229573 Ga0105243_102295733 213
15 3300013306 Ga0163162_11243698 Ga0163162_112436981 213
16 3300025927 Ga0207687_10003478 Ga0207687_1000347812 213
17 3300025935 Ga0207709_10206113 Ga0207709_102061132 213
18 3300026035 Ga0207703_10001170 Ga0207703_1000117010 213
19 3300026041 Ga0207639_10820777 Ga0207639_108207772 213
20 3300046501 Ga0495607_0033844 Ga0495607_0033844_1916_2581 213
21 3300032005 Ga0307411_10151702 Ga0307411_101517022 215
22 3300042014 Ga0439457_076918 Ga0439457_076918_12_659 215
23 3300049758 Ga0501241_007518 Ga0501241_007518_325_972 215
24 iso_pu_bacteria 8057101203 8057105382 216
25 iso_pu_bacteria 2885429604 2885432685 218
26 iso_pu_bacteria 2928027323 2928029333 218
27 iso_pu_bacteria 2984555340 2984556530 218
28 iso_pu_bacteria 2984564862 2984565299 218
29 iso_pu_bacteria 2993356040 2993356372 218
30 3300002774 JGI25150J39212_1000189 JGI25150J39212_10001895 220
31 3300003187 JGI25151J46595_10019372 JGI25151J46595_100193723 220
32 3300003215 JGI25153J46596_10000125 JGI25153J46596_1000012571 220
33 3300003320 rootH2_10079609 rootH2_100796093 220
34 3300003320 rootH2_10186633 rootH2_101866332 220
35 3300003773 Ga0055537_1004317 Ga0055537_10043174 220
36 3300003773 Ga0055537_1004531 Ga0055537_10045313 220
37 3300003775 Ga0055524_1000387 Ga0055524_100038712 220
38 3300003781 Ga0055536_1005046 Ga0055536_10050467 220
39 3300003791 Ga0055530_10001385 Ga0055530_100013853 220
40 3300003791 Ga0055530_10010246 Ga0055530_100102465 220
41 3300003791 Ga0055530_10057467 Ga0055530_100574671 220
42 3300003792 Ga0055540_1001895 Ga0055540_10018956 220
43 3300003794 Ga0055531_10007918 Ga0055531_100079186 220
44 3300005262 Ga0065165_1005864 Ga0065165_10058644 220
45 3300005262 Ga0065165_1052601 Ga0065165_10526012 220
46 3300005262 Ga0065165_1055871 Ga0065165_10558711 220
47 3300005367 Ga0070667_100235329 Ga0070667_1002353291 220
48 3300005367 Ga0070667_100292048 Ga0070667_1002920482 220
49 3300005539 Ga0068853_100221824 Ga0068853_1002218242 220
50 3300005548 Ga0070665_100295926 Ga0070665_1002959262 220
51 3300005577 Ga0068857_100009232 Ga0068857_1000092326 220
52 3300005578 Ga0068854_100132298 Ga0068854_1001322984 220
53 3300005617 Ga0068859_100485453 Ga0068859_1004854532 220
54 3300005618 Ga0068864_100000145 Ga0068864_10000014576 220
55 3300005719 Ga0068861_100307166 Ga0068861_1003071662 220
56 3300005841 Ga0068863_100007065 Ga0068863_1000070655 220
57 3300005842 Ga0068858_100000268 Ga0068858_10000026829 220
58 3300005843 Ga0068860_100000391 Ga0068860_10000039151 220
59 3300005844 Ga0068862_100000014 Ga0068862_100000014147 220
60 3300005983 Ga0081540_1025034 Ga0081540_10250342 220
61 3300006931 Ga0097620_100485418 Ga0097620_1004854182 220
62 3300009101 Ga0105247_10503720 Ga0105247_105037201 220
63 3300009545 Ga0105237_10072362 Ga0105237_100723624 220
64 3300009551 Ga0105238_10054617 Ga0105238_100546174 220
65 3300013306 Ga0163162_10007635 Ga0163162_100076356 220
66 3300013306 Ga0163162_10305368 Ga0163162_103053682 220
67 3300017792 Ga0163161_10282800 Ga0163161_102828002 220
68 3300025233 Ga0209437_102345 Ga0209437_1023455 220
69 3300025245 Ga0207425_1000005 Ga0207425_1000005842 220
70 3300025245 Ga0207425_1017630 Ga0207425_10176302 220
71 3300025250 Ga0209026_1015791 Ga0209026_10157912 220
72 3300025258 Ga0209129_1000345 Ga0209129_10003455 220
73 3300025261 Ga0209233_1000044 Ga0209233_1000044373 220
74 3300025263 Ga0209565_1000029 Ga0209565_1000029216 220
75 3300025263 Ga0209565_1000052 Ga0209565_1000052211 220
76 3300025263 Ga0209565_1009441 Ga0209565_10094414 220
77 3300025273 Ga0209673_1002174 Ga0209673_10021749 220
78 3300025291 Ga0209675_1015601 Ga0209675_10156012 220
79 3300025292 Ga0209676_1002411 Ga0209676_100241113 220
80 3300025294 Ga0209025_1001007 Ga0209025_100100745 220
81 3300025295 Ga0209564_1000866 Ga0209564_10008662 220
82 3300025297 Ga0209758_1000002 Ga0209758_1000002503 220
83 3300025297 Ga0209758_1002578 Ga0209758_10025784 220
84 3300025298 Ga0209050_1000001 Ga0209050_1000001454 220
85 3300025298 Ga0209050_1000167 Ga0209050_1000167120 220
86 3300025298 Ga0209050_1003344 Ga0209050_10033443 220
87 3300025298 Ga0209050_1010674 Ga0209050_10106745 220
88 3300025299 Ga0209256_1000008 Ga0209256_1000008824 220
89 3300025302 Ga0207426_1006259 Ga0207426_10062595 220
90 3300025303 Ga0209051_1000472 Ga0209051_100047250 220
91 3300025304 Ga0209257_1000028 Ga0209257_1000028616 220
92 3300025304 Ga0209257_1007348 Ga0209257_10073484 220
93 3300025304 Ga0209257_1008326 Ga0209257_10083264 220
94 3300025304 Ga0209257_1011475 Ga0209257_10114756 220
95 3300025304 Ga0209257_1051906 Ga0209257_10519062 220
96 3300025315 Ga0207697_10020377 Ga0207697_100203773 220
97 3300025900 Ga0207710_10000920 Ga0207710_100009206 220
98 3300025914 Ga0207671_10002056 Ga0207671_1000205620 220
99 3300025923 Ga0207681_10196593 Ga0207681_101965932 220
100 3300025924 Ga0207694_10001864 Ga0207694_100018645 220
101 3300025941 Ga0207711_10023229 Ga0207711_100232293 220
102 3300025949 Ga0207667_10292016 Ga0207667_102920162 220
103 3300025981 Ga0207640_10008805 Ga0207640_100088056 220
104 3300026035 Ga0207703_10000139 Ga0207703_1000013958 220
105 3300026041 Ga0207639_10286001 Ga0207639_102860012 220
106 3300026088 Ga0207641_10014184 Ga0207641_100141845 220
107 3300026095 Ga0207676_10000072 Ga0207676_10000072104 220
108 3300026116 Ga0207674_10019004 Ga0207674_100190045 220
109 3300026118 Ga0207675_100359121 Ga0207675_1003591212 220
110 3300028379 Ga0268266_10177908 Ga0268266_101779083 220
111 3300028380 Ga0268265_10000048 Ga0268265_1000004816 220
112 3300028381 Ga0268264_10000439 Ga0268264_1000043938 220
113 3300031456 Ga0307513_10024624 Ga0307513_100246243 220
114 3300031456 Ga0307513_10036032 Ga0307513_100360326 220
115 3300031456 Ga0307513_10094621 Ga0307513_100946213 220
116 3300031616 Ga0307508_10000011 Ga0307508_1000001121 220
117 3300031911 Ga0307412_10002381 Ga0307412_100023817 220
118 3300033180 Ga0307510_10006144 Ga0307510_100061448 220
119 3300039450 Ga0436363_0095004 Ga0436363_0095004_38_751 220
120 3300041413 Ga0439465_0002685 Ga0439465_0002685_1227_1889 220
121 3300041413 Ga0439465_0007821 Ga0439465_0007821_943_1605 220
122 3300041997 Ga0439431_0000605 Ga0439431_0000605_3424_4086 220
123 3300041997 Ga0439431_0030157 Ga0439431_0030157_184_846 220
124 3300042004 Ga0439445_0012046 Ga0439445_0012046_362_1024 220
125 3300042004 Ga0439445_0013425 Ga0439445_0013425_222_884 220
126 3300042004 Ga0439445_0050429 Ga0439445_0050429_409_1071 220
127 3300042006 Ga0439432_000152 Ga0439432_000152_3717_4379 220
128 3300042010 Ga0439452_010091 Ga0439452_010091_137_799 220
129 3300042010 Ga0439452_039667 Ga0439452_039667_309_971 220
130 3300042015 Ga0439462_0005451 Ga0439462_0005451_927_1589 220
131 3300042015 Ga0439462_0014846 Ga0439462_0014846_1142_1804 220
132 3300042156 Ga0439446_0014234 Ga0439446_0014234_1356_2018 220
133 3300042156 Ga0439446_0026404 Ga0439446_0026404_767_1429 220
134 3300042435 Ga0439434_0002060 Ga0439434_0002060_4338_5000 220
135 3300046460 Ga0495638_0001117 Ga0495638_0001117_82_744 220
136 3300046524 Ga0495648_0056316 Ga0495648_0056316_244_906 220
137 3300046524 Ga0495648_0080093 Ga0495648_0080093_36_698 220
138 3300046616 Ga0495668_0026139 Ga0495668_0026139_550_1212 220
139 3300046660 Ga0495625_0000094 Ga0495625_0000094_79524_80186 220
140 3300046660 Ga0495625_0099075 Ga0495625_0099075_1161_1823 220
141 3300046691 Ga0495670_0000016 Ga0495670_0000016_66402_67106 220
142 3300046691 Ga0495670_0003066 Ga0495670_0003066_2312_2974 220
143 3300046691 Ga0495670_0039567 Ga0495670_0039567_955_1617 220
144 3300047470 Ga0495681_0041382 Ga0495681_0041382_1278_1991 220
145 3300047472 Ga0495686_0011807 Ga0495686_0011807_3376_4038 220
146 3300047472 Ga0495686_0022109 Ga0495686_0022109_1537_2199 220
147 3300048920 Ga0496117_0162521 Ga0496117_0162521_201_863 220
148 3300048922 Ga0496119_0200740 Ga0496119_0200740_19_681 220
149 3300048926 Ga0496123_0152498 Ga0496123_0152498_471_1169 220
150 3300048926 Ga0496123_0222615 Ga0496123_0222615_201_899 220
151 3300048927 Ga0496124_0000675 Ga0496124_0000675_50659_51357 220
152 3300048927 Ga0496124_0008603 Ga0496124_0008603_3914_4612 220
153 3300048927 Ga0496124_0019209 Ga0496124_0019209_2185_2883 220
154 3300048927 Ga0496124_0363866 Ga0496124_0363866_59_757 220
155 3300048929 Ga0496126_0324462 Ga0496126_0324462_391_1089 220
156 3300049572 Ga0501036_0511462 Ga0501036_0511462_172_834 220
157 3300049742 Ga0501080_0606989 Ga0501080_0606989_209_916 220
158 3300053087 Ga0500643_005447 Ga0500643_005447_2048_2710 220
159 3300053094 Ga0500566_0000712 Ga0500566_0000712_3333_3995 220
160 3300053096 Ga0500641_0001329 Ga0500641_0001329_2568_3281 220
161 3300053104 Ga0500556_0007181 Ga0500556_0007181_826_1494 220
162 3300053119 Ga0500595_002588 Ga0500595_002588_2856_3569 220
163 3300053119 Ga0500595_014084 Ga0500595_014084_1751_2413 220
164 3300053120 Ga0500597_096234 Ga0500597_096234_82_744 220
165 3300053131 Ga0500652_114311 Ga0500652_114311_305_1009 220
166 3300053134 Ga0500658_0000189 Ga0500658_0000189_13951_14613 220
167 3300053134 Ga0500658_0002092 Ga0500658_0002092_2738_3451 220
168 3300053136 Ga0500559_0016668 Ga0500559_0016668_540_1202 220
169 3300053136 Ga0500559_0032869 Ga0500559_0032869_539_1201 220
170 3300053136 Ga0500559_0035943 Ga0500559_0035943_1450_2112 220
171 3300053136 Ga0500559_0125190 Ga0500559_0125190_448_1110 220
172 3300053136 Ga0500559_0154804 Ga0500559_0154804_193_855 220
173 3300053136 Ga0500559_0211562 Ga0500559_0211562_145_807 220
174 3300053139 Ga0500568_0006626 Ga0500568_0006626_1944_2657 220
175 3300053140 Ga0500573_0000290 Ga0500573_0000290_17754_18416 220
176 3300053142 Ga0500577_0061015 Ga0500577_0061015_488_1150 220
177 3300053153 Ga0500616_0040888 Ga0500616_0040888_682_1344 220
178 3300053157 Ga0500624_000003 Ga0500624_000003_72636_73298 220
179 3300053162 Ga0500638_212999 Ga0500638_212999_52_714 220
180 3300053178 Ga0500637_0000073 Ga0500637_0000073_18610_19272 220
181 iso_pu_bacteria 2599185359 2600227098 220
182 iso_pu_bacteria 2643221622 2644127437 220
183 iso_pu_bacteria 2818991466 2819715450 220
184 iso_pu_bacteria 2879163058 2879163500 220
185 iso_pu_bacteria 2928526807 2928530881 220
186 iso_pu_bacteria 2928968154 2928971044 220
187 iso_pu_bacteria 2946787523 2946790333 220
188 3300003323 rootH1_10081980 rootH1_100819804 221
189 3300005331 Ga0070670_100136910 Ga0070670_1001369102 221
190 3300013307 Ga0157372_10139168 Ga0157372_101391681 221
191 3300015690 Ga0183363_1003 Ga0183363_1003107 221
192 3300016635 Ga0183361_10364 Ga0183361_103642 221
193 3300037471 Ga0395905_0046291 Ga0395905_0046291_2496_3161 221
194 3300044719 Ga0466971_0283392 Ga0466971_0283392_31_699 221
195 3300045976 Ga0466967_0338805 Ga0466967_0338805_504_1172 221
196 3300049581 Ga0501047_0203115 Ga0501047_0203115_973_1644 221
197 3300001990 JGI24737J22298_10020974 JGI24737J22298_100209743 222
198 3300002067 JGI24735J21928_10006929 JGI24735J21928_100069293 222
199 3300005327 Ga0070658_10232122 Ga0070658_102321222 222
200 3300005340 Ga0070689_100294581 Ga0070689_1002945812 222
201 3300005344 Ga0070661_100008218 Ga0070661_1000082186 222
202 3300005539 Ga0068853_100601773 Ga0068853_1006017731 222
203 3300005548 Ga0070665_101007886 Ga0070665_1010078862 222
204 3300013102 Ga0157371_10159228 Ga0157371_101592282 222
205 3300025901 Ga0207688_10007318 Ga0207688_100073183 222
206 3300025909 Ga0207705_10335018 Ga0207705_103350181 222
207 3300025960 Ga0207651_10508942 Ga0207651_105089422 222
208 3300025981 Ga0207640_10005516 Ga0207640_100055165 222
209 3300026067 Ga0207678_10049430 Ga0207678_100494305 222
210 3300026067 Ga0207678_10227105 Ga0207678_102271052 222
211 3300026089 Ga0207648_10011323 Ga0207648_100113235 222
212 3300028380 Ga0268265_10040921 Ga0268265_100409211 222
213 3300028380 Ga0268265_10183456 Ga0268265_101834562 222
214 3300037471 Ga0395905_0115923 Ga0395905_0115923_642_1322 222
215 3300038705 Ga0237819_00449 Ga0237819_00449_4499_5206 222
216 3300046616 Ga0495668_0005930 Ga0495668_0005930_4459_5130 222
217 3300049822 Ga0501035_0218089 Ga0501035_0218089_745_1437 222
218 3300053134 Ga0500658_0000032 Ga0500658_0000032_4323_4994 222
219 3300053156 Ga0500622_0140829 Ga0500622_0140829_89_757 222

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13419

HAD_2

Haloacid dehalogenase-like hydrolase

28

208

0.89

PF00702

Hydrolase

haloacid dehalogenase-like hydrolase

25

202

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
4eek-assembly1.cif.gz_A crystal structure of had family hydrolase dr_1622 from deinococcus radiodurans r1 (target efi-501256) with bound phosphate and sodium 0.9091 2 221
4eek-assembly1.cif.gz_A crystal structure of had family hydrolase dr_1622 from deinococcus radiodurans r1 (target efi-501256) with bound phosphate and sodium 0.8975 2 221
2fdr-assembly1.cif.gz_A crystal structure of conserved haloacid dehalogenase-like protein of unknown function atu0790 from agrobacterium tumefaciens str. c58 0.883 6 221
7ocq-assembly1.cif.gz_A nadh bound to the dehydrogenase domain of the bifunctional mannitol-1-phosphate dehydrogenase/phosphatase mtld from acinetobacter baumannii 0.8711 2 221
7ocn-assembly1.cif.gz_A crystal structure of the bifunctional mannitol-1-phosphate dehydrogenase/phosphatase mtld from acinetobacter baumannii 0.8711 2 221
ID Description Score Start End Superfamily
af_P32662_111_227_3.40.50.1000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.9264 89 187 3.40.50.1000
4eenA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.8975 2 221 3.40.50.1000
af_Q652P6_229_339_3.40.50.1000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.8907 102 214 3.40.50.1000
af_Q84MD8_87_222_3.40.50.1000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.889 80 222 3.40.50.1000
af_Q84MD8_87_222_3.40.50.1000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.8768 80 222 3.40.50.1000
ID Description Score Start End GO Terms
AF-A0A4Q2ZBL6-F1-model_v4 HAD family phosphatase 0.9935 1 218 GO:0003824
AF-A0A396RMM4-F1-model_v4 HAD family phosphatase 0.9917 1 220 GO:0003824
AF-A0A6G6Y0T1-F1-model_v4 HAD family phosphatase 0.9896 1 219 GO:0003824
AF-A0A525HIB1-F1-model_v4 HAD family phosphatase 0.9864 2 220 GO:0003824
AF-A0A6G6Y0T1-F1-model_v4 HAD family phosphatase 0.9807 1 219 GO:0003824

Feature Viewer

pLDDT pTM Quality
93.97 0.89 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map