F330913

General Info

Members Datasets Scaffolds Average Seq Length
219 192 188 563

Family's Representative Sequence

Representative Sequence 3300005981|Ga0081538_10002345|Ga0081538_1000234515
Length 610
Sequence VAQVDGPKRGSVKPAGRLERWVPGLRTLREYQRSWMASDLVAGLVLTALLIPVGMGYAQAAGLPPITGLYATIVPLVAYAVFGPSRVMVLGPDSSLAAVIAAVILPLGGSDPETAVALAGALAILTGLIILTAGVARLGFVTELLSRPVQLGYLYGIAVTILVGQLPKLCGFSIEGRGLLTETRDFLQGVADGRVNRAALAVGLAGIVVIFGLRRIWPAVPGVMVAVLVGIAAVSLFDLTEDGVQVIGVLPEGLPSLIIPTVELADLGALFSGALGIALVAVADTTVLSQSLAAQRDETVDANQELRALGVANLAAGLFQGFSISSSASRTPVAVTAGARSQLTPLVGAVTIALALVLAPGAIRNLPLSMLAAIVITAAVGLIDVGAVPRLFRVRRSEFVLWLTAFAGVALLGVLLGIFVAILLSLADFVRRAWRPHDAALGREDDLKGYHDIERHPSARRIPGLLLYRFDAPLFFANAGYFRRRIHHLVDEATHPVRWVVVAAEPITDIDTTAADTLRQLLTELRQQQVTLAFAEMKGPVKDRLRRYDLFDAVGPDHFFPTIGTAVDSYLAATGTTWVDWEERSPAGSEPGPDGSGAATPDRPAPESRG

Samples

Sample ID Description Type Environment
1 2519103095 Burkholderia sp. KJ006 Isolate Nodule
2 2582581311 Burkholderia sp. WP42 Isolate Rhizosphere
3 2599185239 Burkholderia sp. NFACC38-1 Isolate Rhizoplane
4 2599185240 Burkholderia sp. NFPP32 Isolate Rhizoplane
5 2599185355 Burkholderia sp. NFACC33-1 Isolate Rhizoplane
6 2675903129 Burkholderia pyrrocinia NFIX32 Isolate Rhizoplane
7 2690315906 Arthrobacter sp. OY3WO11 Isolate Unclassified
8 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
9 2816332253 Burkholderia vietnamiensis HI2297 Isolate Unclassified
10 2816332256 Burkholderia vietnamiensis MSMB608WGS Isolate Unclassified
11 2816332286 Burkholderia vietnamiensis HI2221 Isolate Rhizosphere
12 2818991452 Burkholderia cepacia 561 Isolate Unclassified
13 2844849076 Arthrobacter cupressi DSM 24664 Isolate Rhizosphere
14 2857740372 Paenarthrobacter sp. R-74611 Isolate Unclassified
15 2870068957 Burkholderia sp. JP2-270 Isolate Unclassified
16 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
17 2919034639 Paenarthrobacter nitroguajacolicus 247 Isolate Rhizosphere
18 2919538618 Paenarthrobacter nitroguajacolicus 3945 Isolate Unclassified
19 2928170801 Burkholderia sp. 572 Isolate Unclassified
20 2932426870 Paenarthrobacter sp. 4246 Isolate Rhizosphere
21 2933418574 Jeotgalibacillus campisalis 4120 Isolate Rhizosphere
22 2939674588 Arthrobacter bambusae 3552 Isolate Rhizosphere
23 3007803356 Pseudomonas sp. CM27 Isolate Unclassified
24 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
25 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
26 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
27 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
28 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
29 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
30 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
31 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
32 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
33 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
34 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
35 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
36 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
37 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
38 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
39 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
40 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
41 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
42 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
43 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
44 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
45 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
46 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
47 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
48 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
49 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
50 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
51 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
52 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
53 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
54 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
55 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
56 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
57 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
58 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
59 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
60 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
61 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
62 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
63 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
64 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
65 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
66 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
67 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
68 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
69 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
70 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
71 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
72 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
73 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
74 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
80 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025290 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (version 2) Metagenome Rhizosphere
82 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
83 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
103 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
104 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
105 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
106 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
107 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
108 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
109 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
110 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
111 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
112 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
113 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
114 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
115 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
116 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
117 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
118 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
119 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
120 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
121 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
122 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
123 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
124 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
125 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
126 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
127 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
128 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
129 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
130 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
131 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
132 3300042530 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530L_E14_082316_2047 Metagenome Rhizosphere
133 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
134 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
135 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
136 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
137 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
138 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
139 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
140 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
141 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
142 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
143 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
144 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
145 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
146 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
147 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
148 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
149 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
150 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
151 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
152 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
153 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
164 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
165 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
166 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
167 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
168 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
169 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
170 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
171 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
172 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
173 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
174 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
176 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
177 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
178 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
179 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
180 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
181 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
182 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
183 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
184 8011350971 Pseudomonas sp. 30_B Isolate Rhizosphere
185 8018845410 Burkholderia reimsis BE51 Isolate Rhizosphere
186 8020807995 Burkholderia sp. B10 Isolate Rhizosphere
187 8020945358 Burkholderia sp. BE17 Isolate Rhizosphere
188 8021120328 Burkholderia sp. LS-044 Isolate Rhizosphere
189 8039098773 Burkholderia multivorans MSMB612WGS Isolate Unclassified
190 8040167225 Burkholderia vietnamiensis RS1 Isolate Unclassified
191 8040173305 Burkholderia vietnamiensis BE10 Isolate Rhizosphere
192 8054107350 Arthrobacter rhizosphaerae CCNWLXL 1-35 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.39
Metatranscriptomes 0
Isolates 14.61

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.48
Nodule 0.46
Rhizoplane 4.57
Rhizosphere 80.37
Stem 0
Stem Tuber 0
Unclassified 9.13

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10015142 3300001979 Bacteria 2823
2 JGI24739J22299_10001574 3300001989 Bacteria 8634
3 JGI24739J22299_10013594 3300001989 Bacteria 2969
4 JGI24738J21930_10000441 3300002075 Bacteria 11730
5 JGI25152J39213_1000019 3300002773 Bacteria 108017
6 rootH1_10046243 3300003316 Bacteria 7856
7 rootH1_10046243 3300003323 Bacteria 5916
8 rootH1_10107692 3300003316 Bacteria 3361
9 rootH2_10095764 3300003320 Bacteria 3753
10 rootH2_10199045 3300003320 Bacteria 2383
11 JGI25407J50210_10005646 3300003373 Bacteria 3084
12 Ga0055532_1000124 3300003758 Bacteria 78333
13 Ga0055527_1000036 3300003760 Bacteria 133374
14 Ga0055535_1000051 3300003761 Bacteria 133374
15 Ga0065707_10000793 3300005295 Bacteria 14762
16 Ga0070658_10000247 3300005327 Bacteria 47860
17 Ga0070683_100001005 3300005329 Bacteria 21132
18 Ga0070670_100016183 3300005331 Bacteria 6402
19 Ga0070666_10000517 3300005335 Bacteria 23369
20 Ga0070660_100000012 3300005339 Bacteria 123961
21 Ga0070661_100000744 3300005344 Bacteria 23624
22 Ga0070671_100016714 3300005355 Bacteria 5933
23 Ga0070659_100000254 3300005366 Bacteria 42101
24 Ga0070667_100008615 3300005367 Bacteria 8451
25 Ga0070714_100000032 3300005435 Bacteria 133378
26 Ga0070663_100000089 3300005455 Bacteria 41316
27 Ga0070662_100000023 3300005457 Bacteria 91833
28 Ga0068853_100037255 3300005539 Bacteria 4138
29 Ga0070693_100002233 3300005547 Bacteria 8897
30 Ga0070665_100002127 3300005548 Bacteria 22119
31 Ga0068855_100003206 3300005563 Bacteria 20023
32 Ga0070664_100001097 3300005564 Bacteria 21383
33 Ga0068856_100000128 3300005614 Bacteria 76603
34 Ga0068852_100002602 3300005616 Bacteria 12470
35 Ga0068864_100026273 3300005618 Bacteria 4910
36 Ga0068851_10022254 3300005834 Bacteria 3085
37 Ga0068858_100065746 3300005842 Bacteria 3356
38 Ga0081538_10000342 3300005981 Bacteria 53103
39 Ga0081538_10000370 3300005981 Bacteria 51234
40 Ga0081538_10002345 3300005981 Bacteria 18659
41 Ga0081538_10005763 3300005981 Bacteria 11053
42 Ga0081538_10006502 3300005981 Bacteria 10280
43 Ga0081538_10011469 3300005981 Bacteria 7177
44 Ga0081540_1023696 3300005983 Bacteria 3582
45 Ga0070717_10000541 3300006028 Bacteria 23975
46 Ga0070717_10001804 3300006028 Bacteria 14957
47 Ga0075428_100113820 3300006844 Bacteria 2948
48 Ga0075430_100058797 3300006846 Bacteria 3232
49 Ga0075429_100021455 3300006880 Bacteria 5600
50 Ga0105251_10000666 3300009011 Bacteria 31657
51 Ga0105251_10049121 3300009011 Bacteria 2021
52 Ga0105240_10000229 3300009093 Bacteria 111182
53 Ga0114129_10012997 3300009147 Bacteria 11854
54 Ga0105241_10025030 3300009174 Bacteria 4434
55 Ga0105248_10000168 3300009177 Bacteria 76376
56 Ga0105249_10057613 3300009553 Bacteria 3560
57 Ga0157373_10002877 3300013100 Bacteria 13024
58 Ga0157371_10001719 3300013102 Bacteria 22257
59 Ga0163163_10000151 3300014325 Bacteria 72496
60 Ga0157379_10129096 3300014968 Bacteria 2274
61 Ga0182006_1003705 3300015261 Bacteria 7732
62 Ga0209566_100255 3300025225 Bacteria 50715
63 Ga0209672_100026 3300025228 Bacteria 348998
64 Ga0209147_100033 3300025229 Bacteria 348998
65 Ga0209258_100051 3300025242 Bacteria 348998
66 Ga0209148_1002805 3300025254 Bacteria 5418
67 Ga0209129_1000046 3300025258 Bacteria 271702
68 Ga0209455_1000154 3300025272 Bacteria 124382
69 Ga0207673_1000474 3300025290 Bacteria 4184
70 Ga0209025_1000543 3300025294 Bacteria 70931
71 Ga0207647_10002075 3300025904 Bacteria 15321
72 Ga0207705_10001222 3300025909 Bacteria 20743
73 Ga0207695_10000268 3300025913 Bacteria 130752
74 Ga0207695_10006787 3300025913 Bacteria 14753
75 Ga0207657_10000038 3300025919 Bacteria 123940
76 Ga0207649_10000187 3300025920 Bacteria 50808
77 Ga0207664_10000059 3300025929 Bacteria 119580
78 Ga0207690_10000149 3300025932 Bacteria 55374
79 Ga0207706_10000061 3300025933 Bacteria 109447
80 Ga0207711_10001559 3300025941 Bacteria 21209
81 Ga0207661_10000125 3300025944 Bacteria 48789
82 Ga0207679_10000564 3300025945 Bacteria 24942
83 Ga0207667_10003031 3300025949 Bacteria 20850
84 Ga0207703_10009772 3300026035 Bacteria 7525
85 Ga0207639_10000469 3300026041 Bacteria 27814
86 Ga0207678_10002362 3300026067 Bacteria 17108
87 Ga0207708_10038202 3300026075 Bacteria 3657
88 Ga0207702_10000323 3300026078 Bacteria 54764
89 Ga0207698_10112379 3300026142 Bacteria 2286
90 Ga0268266_10013421 3300028379 Bacteria 7056
91 Ga0307509_10020369 3300031507 Bacteria 7526
92 Ga0316576_10023577 3300031727 Bacteria 4288
93 Ga0307405_10025346 3300031731 Bacteria 3403
94 Ga0307413_10014671 3300031824 Bacteria 3989
95 Ga0307413_10021195 3300031824 Bacteria 3474
96 Ga0307407_10048869 3300031903 Bacteria 2411
97 Ga0307412_10009174 3300031911 Bacteria 5669
98 Ga0307409_100018493 3300031995 Bacteria 4688
99 Ga0307416_100051858 3300032002 Bacteria 3280
100 Ga0307415_100060119 3300032126 Bacteria 2624
101 Ga0373931_0027048 3300035691 Bacteria 2924
102 Ga0373947_0063211 3300035725 Bacteria 2255
103 Ga0395899_0041988 3300037312 Bacteria 3415
104 Ga0395900_0121773 3300037418 Bacteria 2676
105 Ga0395898_0061144 3300037466 Bacteria 3659
106 Ga0395905_0004858 3300037471 Bacteria 13854
107 Ga0395901_0003036 3300038443 Bacteria 16914
108 Ga0395901_0022430 3300038443 Bacteria 6470
109 Ga0436365_0414349 3300039437 Bacteria 2748
110 Ga0439436_0011883 3300041404 Bacteria 2643
111 Ga0439439_0014110 3300041406 Bacteria 1942
112 Ga0439461_0002469 3300041410 Bacteria 2957
113 Ga0439466_0000282 3300041411 Bacteria 19773
114 Ga0439448_0004585 3300042005 Bacteria 3904
115 Ga0439449_0001664 3300042007 Bacteria 8732
116 Ga0439449_0008930 3300042007 Bacteria 3801
117 Ga0439450_006247 3300042008 Bacteria 2137
118 Ga0439455_0011134 3300042012 Bacteria 1991
119 Ga0439462_0012627 3300042015 Bacteria 2158
120 Ga0439463_000121 3300042016 Bacteria 19530
121 Ga0450920_001410 3300042122 Bacteria 3972
122 Ga0450907_004495 3300042146 Unclassified 2403
123 Ga0439464_0000766 3300042439 Bacteria 6987
124 Ga0450916_000007 3300042530 Bacteria 11843
125 Ga0451577_0000349 3300042876 Bacteria 85991
126 Ga0451577_0006116 3300042876 Bacteria 12089
127 Ga0453684_0001367 3300044712 Bacteria 70807
128 Ga0453684_0002292 3300044712 Bacteria 47025
129 Ga0495607_0022157 3300046501 Bacteria 3994
130 Ga0495606_0047554 3300046507 Bacteria 2827
131 Ga0495643_0000642 3300046522 Bacteria 41391
132 Ga0495648_0002917 3300046524 Bacteria 15364
133 Ga0495613_0035565 3300046689 Bacteria 3696
134 Ga0495613_0075521 3300046689 Bacteria 2453
135 Ga0495670_0015076 3300046691 Bacteria 3802
136 Ga0495649_0001705 3300046694 Bacteria 16284
137 Ga0495672_0020581 3300047320 Bacteria 4318
138 Ga0495676_0047971 3300047321 Bacteria 3448
139 Ga0495673_0008338 3300047469 Bacteria 5840
140 Ga0496102_0009826 3300048905 Bacteria 8226
141 Ga0496105_0102918 3300048908 Bacteria 2358
142 Ga0496108_0015291 3300048911 Bacteria 6262
143 Ga0496109_0017328 3300048912 Bacteria 6312
144 Ga0496115_0017846 3300048918 Bacteria 5435
145 Ga0496115_0066276 3300048918 Bacteria 2918
146 Ga0496117_0005484 3300048920 Bacteria 13295
147 Ga0496124_0103446 3300048927 Bacteria 2303
148 Ga0495682_0001152 3300049460 Bacteria 15199
149 Ga0501031_0011221 3300049568 Bacteria 5840
150 Ga0501036_0083984 3300049572 Bacteria 2692
151 Ga0501037_0044552 3300049573 Bacteria 3258
152 Ga0501038_0002096 3300049574 Bacteria 18478
153 Ga0501038_0006600 3300049574 Bacteria 10732
154 Ga0501039_0015769 3300049575 Bacteria 5783
155 Ga0501040_0001411 3300049576 Bacteria 15198
156 Ga0501041_0011477 3300049577 Bacteria 5237
157 Ga0501042_0024315 3300049578 Bacteria 4248
158 Ga0501043_0047846 3300049579 Bacteria 3362
159 Ga0501046_0022168 3300049580 Bacteria 5234
160 Ga0501048_0003741 3300049582 Bacteria 11602
161 Ga0501068_0029058 3300049584 Bacteria 3272
162 Ga0501068_0030721 3300049584 Bacteria 3188
163 Ga0501070_0068031 3300049586 Bacteria 2949
164 Ga0501071_0012461 3300049587 Bacteria 5767
165 Ga0501072_0016643 3300049588 Bacteria 5647
166 Ga0501073_0013061 3300049589 Bacteria 6056
167 Ga0501073_0036266 3300049589 Bacteria 3504
168 Ga0501074_0007774 3300049590 Bacteria 7760
169 Ga0501075_0005254 3300049591 Bacteria 8854
170 Ga0501076_0008826 3300049592 Bacteria 7408
171 Ga0501076_0054482 3300049592 Bacteria 3169
172 Ga0501077_0000333 3300049593 Bacteria 27847
173 Ga0501079_0066492 3300049741 Bacteria 2781
174 Ga0501035_0054723 3300049822 Bacteria 3564
175 Ga0501045_0051097 3300049824 Bacteria 3016
176 nmdc:mga05p37_115746_c1 3300050507 Bacteria 3295
177 nmdc:mga05p37_152196_c1 3300050507 Bacteria 2829
178 nmdc:mga05p37_5188_c1 3300050507 Bacteria 15286
179 nmdc:mga09592_20574_c1 3300050508 Bacteria 5428
180 nmdc:mga09592_9768_c1 3300050508 Bacteria 7798
181 nmdc:mga0qj67_87890_c1 3300050509 Bacteria 2495
182 nmdc:mga06r32_4005_c1 3300050510 Bacteria 13202
183 nmdc:mga0a205_195190_c1 3300050515 Bacteria 1915
184 nmdc:mga0a205_89810_c1 3300050515 Bacteria 2969
185 Ga0501084_0004108 3300054114 Bacteria 11856
186 Ga0501082_0016918 3300060353 Bacteria 6279
187 Ga0530510_0018890 3300061734 Bacteria 4888
188 Ga0530510_0056787 3300061734 Bacteria 2829

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300003316 rootH1_10107692 rootH1_101076924 476
2 3300003758 Ga0055532_1000124 Ga0055532_100012466 476
3 3300003760 Ga0055527_1000036 Ga0055527_100003676 476
4 3300003761 Ga0055535_1000051 Ga0055535_100005176 476
5 3300025913 Ga0207695_10000268 Ga0207695_1000026866 486
6 3300025228 Ga0209672_100026 Ga0209672_100026102 487
7 3300025229 Ga0209147_100033 Ga0209147_100033102 487
8 3300025242 Ga0209258_100051 Ga0209258_100051102 487
9 3300025254 Ga0209148_1002805 Ga0209148_10028054 487
10 3300025272 Ga0209455_1000154 Ga0209455_1000154102 487
11 3300049589 Ga0501073_0036266 Ga0501073_0036266_346_1977 487
12 3300035725 Ga0373947_0063211 Ga0373947_0063211_43_1779 493
13 3300046689 Ga0495613_0035565 Ga0495613_0035565_518_2254 493
14 3300047321 Ga0495676_0047971 Ga0495676_0047971_1187_2923 493
15 3300009093 Ga0105240_10000229 Ga0105240_1000022952 497
16 3300025225 Ga0209566_100255 Ga0209566_10025517 501
17 3300039437 Ga0436365_0414349 Ga0436365_0414349_787_2553 501
18 3300031824 Ga0307413_10021195 Ga0307413_100211952 505
19 3300009553 Ga0105249_10057613 Ga0105249_100576133 506
20 3300031507 Ga0307509_10020369 Ga0307509_100203693 506
21 iso_pu_bacteria 2870068957 2870071411 506
22 3300042122 Ga0450920_001410 Ga0450920_001410_1049_2743 512
23 3300005981 Ga0081538_10006502 Ga0081538_100065027 514
24 3300006844 Ga0075428_100113820 Ga0075428_1001138203 515
25 3300041404 Ga0439436_0011883 Ga0439436_0011883_993_2624 519
26 3300009147 Ga0114129_10012997 Ga0114129_100129978 521
27 3300046501 Ga0495607_0022157 Ga0495607_0022157_23_1630 521
28 3300048918 Ga0496115_0017846 Ga0496115_0017846_1523_3121 521
29 3300050507 nmdc:mga05p37_5188_c1 nmdc:mga05p37_5188_c1_9056_10654 521
30 3300031727 Ga0316576_10023577 Ga0316576_100235771 523
31 3300037418 Ga0395900_0121773 Ga0395900_0121773_190_1962 523
32 3300038443 Ga0395901_0022430 Ga0395901_0022430_526_2298 523
33 3300015261 Ga0182006_1003705 Ga0182006_10037053 524
34 3300037312 Ga0395899_0041988 Ga0395899_0041988_715_2487 524
35 3300050507 nmdc:mga05p37_115746_c1 nmdc:mga05p37_115746_c1_1018_2640 524
36 3300050508 nmdc:mga09592_20574_c1 nmdc:mga09592_20574_c1_1730_3352 524
37 3300050509 nmdc:mga0qj67_87890_c1 nmdc:mga0qj67_87890_c1_123_1745 524
38 3300050510 nmdc:mga06r32_4005_c1 nmdc:mga06r32_4005_c1_603_2225 524
39 3300046507 Ga0495606_0047554 Ga0495606_0047554_624_2312 525
40 3300046524 Ga0495648_0002917 Ga0495648_0002917_10270_11958 525
41 3300046694 Ga0495649_0001705 Ga0495649_0001705_9623_11311 525
42 3300047320 Ga0495672_0020581 Ga0495672_0020581_553_2241 525
43 3300047469 Ga0495673_0008338 Ga0495673_0008338_1524_3212 525
44 3300049460 Ga0495682_0001152 Ga0495682_0001152_3412_5100 525
45 3300042007 Ga0439449_0008930 Ga0439449_0008930_139_1833 528
46 iso_pu_bacteria 2690315906 2691512959 528
47 3300014968 Ga0157379_10129096 Ga0157379_101290962 529
48 3300025290 Ga0207673_1000474 Ga0207673_10004742 529
49 3300048905 Ga0496102_0009826 Ga0496102_0009826_4842_6464 529
50 3300048908 Ga0496105_0102918 Ga0496105_0102918_109_1731 529
51 3300048911 Ga0496108_0015291 Ga0496108_0015291_1411_3033 529
52 3300048912 Ga0496109_0017328 Ga0496109_0017328_1472_3094 529
53 3300048918 Ga0496115_0066276 Ga0496115_0066276_1242_2864 529
54 3300050515 nmdc:mga0a205_195190_c1 nmdc:mga0a205_195190_c1_106_1728 529
55 3300050515 nmdc:mga0a205_89810_c1 nmdc:mga0a205_89810_c1_523_2145 529
56 3300031824 Ga0307413_10014671 Ga0307413_100146712 530
57 3300061734 Ga0530510_0056787 Ga0530510_0056787_535_2322 530
58 3300049568 Ga0501031_0011221 Ga0501031_0011221_494_2263 533
59 3300049572 Ga0501036_0083984 Ga0501036_0083984_381_2150 533
60 3300049573 Ga0501037_0044552 Ga0501037_0044552_1410_3179 533
61 3300049574 Ga0501038_0002096 Ga0501038_0002096_186_1955 533
62 3300049575 Ga0501039_0015769 Ga0501039_0015769_383_2152 533
63 3300049576 Ga0501040_0001411 Ga0501040_0001411_13047_14816 533
64 3300049577 Ga0501041_0011477 Ga0501041_0011477_2960_4729 533
65 3300049578 Ga0501042_0024315 Ga0501042_0024315_1071_2840 533
66 3300049580 Ga0501046_0022168 Ga0501046_0022168_3082_4851 533
67 3300049582 Ga0501048_0003741 Ga0501048_0003741_9466_11235 533
68 3300049584 Ga0501068_0029058 Ga0501068_0029058_1147_2916 533
69 3300049586 Ga0501070_0068031 Ga0501070_0068031_52_1821 533
70 3300049587 Ga0501071_0012461 Ga0501071_0012461_420_2189 533
71 3300049588 Ga0501072_0016643 Ga0501072_0016643_3370_5139 533
72 3300049590 Ga0501074_0007774 Ga0501074_0007774_5484_7253 533
73 3300049591 Ga0501075_0005254 Ga0501075_0005254_6831_8600 533
74 3300049592 Ga0501076_0054482 Ga0501076_0054482_1120_2889 533
75 3300049593 Ga0501077_0000333 Ga0501077_0000333_21728_23497 533
76 3300049741 Ga0501079_0066492 Ga0501079_0066492_525_2294 533
77 3300049822 Ga0501035_0054723 Ga0501035_0054723_489_2258 533
78 3300049824 Ga0501045_0051097 Ga0501045_0051097_1120_2889 533
79 3300054114 Ga0501084_0004108 Ga0501084_0004108_1491_3260 533
80 3300060353 Ga0501082_0016918 Ga0501082_0016918_3517_5286 533
81 3300061734 Ga0530510_0018890 Ga0530510_0018890_2860_4629 533
82 3300006028 Ga0070717_10001804 Ga0070717_1000180415 534
83 3300003316 rootH1_10046243 rootH1_100462436 536
84 3300031731 Ga0307405_10025346 Ga0307405_100253462 537
85 3300031911 Ga0307412_10009174 Ga0307412_100091743 537
86 3300046691 Ga0495670_0015076 Ga0495670_0015076_1243_2958 537
87 3300006880 Ga0075429_100021455 Ga0075429_1000214557 539
88 3300050507 nmdc:mga05p37_152196_c1 nmdc:mga05p37_152196_c1_953_2665 539
89 3300050508 nmdc:mga09592_9768_c1 nmdc:mga09592_9768_c1_3965_5677 539
90 iso_pu_bacteria 2599185240 2599746768 540
91 iso_pu_bacteria 2599185355 2600208674 540
92 iso_pu_bacteria 2675903129 2676744330 540
93 3300005435 Ga0070714_100000032 Ga0070714_10000003239 541
94 3300006028 Ga0070717_10000541 Ga0070717_1000054112 541
95 3300025929 Ga0207664_10000059 Ga0207664_1000005963 541
96 iso_pu_bacteria 8039098773 8039102874 542
97 3300003320 rootH2_10199045 rootH2_101990451 544
98 3300049574 Ga0501038_0006600 Ga0501038_0006600_698_2455 544
99 3300046522 Ga0495643_0000642 Ga0495643_0000642_14738_16408 545
100 iso_pu_bacteria 2939674588 2939675676 546
101 iso_pu_bacteria 2919034639 2919037170 547
102 iso_pu_bacteria 2919538618 2919542973 547
103 iso_pu_bacteria 2932426870 2932430830 547
104 3300002773 JGI25152J39213_1000019 JGI25152J39213_100001970 548
105 3300025258 Ga0209129_1000046 Ga0209129_100004698 548
106 3300025294 Ga0209025_1000543 Ga0209025_100054338 548
107 3300005983 Ga0081540_1023696 Ga0081540_10236963 549
108 3300042876 Ga0451577_0000349 Ga0451577_0000349_77008_78759 549
109 3300044712 Ga0453684_0002292 Ga0453684_0002292_7242_8993 549
110 iso_pu_bacteria 2844849076 2844852585 549
111 iso_pu_bacteria 2904497146 2904501168 549
112 iso_pu_bacteria 8054107350 8054109007 549
113 3300005295 Ga0065707_10000793 Ga0065707_100007933 550
114 3300041406 Ga0439439_0014110 Ga0439439_0014110_173_1867 550
115 3300041410 Ga0439461_0002469 Ga0439461_0002469_367_2061 550
116 3300041411 Ga0439466_0000282 Ga0439466_0000282_1402_3096 550
117 3300042007 Ga0439449_0001664 Ga0439449_0001664_1043_2737 550
118 3300042015 Ga0439462_0012627 Ga0439462_0012627_453_2147 550
119 3300042146 Ga0450907_004495 Ga0450907_004495_12_1706 550
120 iso_pu_bacteria 2811994872 2812325122 551
121 iso_pu_bacteria 2857740372 2857742838 551
122 iso_pu_bacteria 2933418574 2933419454 551
123 3300032002 Ga0307416_100051858 Ga0307416_1000518582 552
124 3300042876 Ga0451577_0006116 Ga0451577_0006116_2860_4581 553
125 3300044712 Ga0453684_0001367 Ga0453684_0001367_63467_65188 553
126 iso_pu_bacteria 2519103095 2519462999 553
127 iso_pu_bacteria 2582581311 2585293988 553
128 iso_pu_bacteria 2599185239 2599739187 553
129 iso_pu_bacteria 2816332253 2817262498 553
130 iso_pu_bacteria 2816332256 2817275922 553
131 iso_pu_bacteria 2816332286 2817456689 553
132 iso_pu_bacteria 2818991452 2819636133 553
133 iso_pu_bacteria 2928170801 2928176431 553
134 iso_pu_bacteria 8018845410 8018845535 553
135 iso_pu_bacteria 8020807995 8020811011 553
136 iso_pu_bacteria 8020945358 8020949344 553
137 iso_pu_bacteria 8021120328 8021125832 553
138 iso_pu_bacteria 8040167225 8040171931 553
139 iso_pu_bacteria 8040173305 8040176514 553
140 3300003373 JGI25407J50210_10005646 JGI25407J50210_100056463 554
141 3300005981 Ga0081538_10011469 Ga0081538_100114695 554
142 3300042005 Ga0439448_0004585 Ga0439448_0004585_135_1868 554
143 3300042008 Ga0439450_006247 Ga0439450_006247_175_1908 554
144 3300042012 Ga0439455_0011134 Ga0439455_0011134_25_1779 554
145 3300042016 Ga0439463_000121 Ga0439463_000121_16396_18129 554
146 3300042439 Ga0439464_0000766 Ga0439464_0000766_3923_5656 554
147 3300042530 Ga0450916_000007 Ga0450916_000007_2458_4191 554
148 3300026075 Ga0207708_10038202 Ga0207708_100382023 555
149 3300046689 Ga0495613_0075521 Ga0495613_0075521_36_1808 555
150 iso_pu_bacteria 3007803356 3007807595 555
151 3300006846 Ga0075430_100058797 Ga0075430_1000587973 556
152 3300049579 Ga0501043_0047846 Ga0501043_0047846_63_1820 556
153 3300049584 Ga0501068_0030721 Ga0501068_0030721_1267_3024 556
154 3300049589 Ga0501073_0013061 Ga0501073_0013061_586_2343 556
155 3300049592 Ga0501076_0008826 Ga0501076_0008826_2847_4604 556
156 3300003320 rootH2_10095764 rootH2_100957644 557
157 3300005981 Ga0081538_10000370 Ga0081538_1000037028 559
158 3300009011 Ga0105251_10049121 Ga0105251_100491212 559
159 3300031995 Ga0307409_100018493 Ga0307409_1000184933 559
160 3300005981 Ga0081538_10000342 Ga0081538_1000034224 560
161 3300031903 Ga0307407_10048869 Ga0307407_100488692 560
162 3300037466 Ga0395898_0061144 Ga0395898_0061144_639_2375 560
163 3300037471 Ga0395905_0004858 Ga0395905_0004858_5157_6893 560
164 3300038443 Ga0395901_0003036 Ga0395901_0003036_10187_11923 560
165 3300009011 Ga0105251_10000666 Ga0105251_100006663 562
166 3300048920 Ga0496117_0005484 Ga0496117_0005484_7019_8740 562
167 3300048927 Ga0496124_0103446 Ga0496124_0103446_110_1831 562
168 iso_pu_bacteria 8011350971 8011353286 563
169 3300005981 Ga0081538_10002345 Ga0081538_1000234515 564
170 3300005981 Ga0081538_10005763 Ga0081538_100057637 564
171 3300032126 Ga0307415_100060119 Ga0307415_1000601192 564
172 3300025913 Ga0207695_10006787 Ga0207695_100067876 568
173 3300001979 JGI24740J21852_10015142 JGI24740J21852_100151421 569
174 3300001989 JGI24739J22299_10001574 JGI24739J22299_100015746 569
175 3300001989 JGI24739J22299_10013594 JGI24739J22299_100135942 569
176 3300002075 JGI24738J21930_10000441 JGI24738J21930_100004416 569
177 3300005327 Ga0070658_10000247 Ga0070658_100002472 569
178 3300005329 Ga0070683_100001005 Ga0070683_1000010053 569
179 3300005331 Ga0070670_100016183 Ga0070670_1000161837 569
180 3300005335 Ga0070666_10000517 Ga0070666_1000051717 569
181 3300005339 Ga0070660_100000012 Ga0070660_10000001287 569
182 3300005344 Ga0070661_100000744 Ga0070661_10000074416 569
183 3300005355 Ga0070671_100016714 Ga0070671_1000167142 569
184 3300005366 Ga0070659_100000254 Ga0070659_10000025427 569
185 3300005367 Ga0070667_100008615 Ga0070667_1000086152 569
186 3300005455 Ga0070663_100000089 Ga0070663_1000000897 569
187 3300005457 Ga0070662_100000023 Ga0070662_10000002329 569
188 3300005539 Ga0068853_100037255 Ga0068853_1000372552 569
189 3300005547 Ga0070693_100002233 Ga0070693_1000022333 569
190 3300005548 Ga0070665_100002127 Ga0070665_10000212711 569
191 3300005563 Ga0068855_100003206 Ga0068855_1000032062 569
192 3300005564 Ga0070664_100001097 Ga0070664_1000010973 569
193 3300005614 Ga0068856_100000128 Ga0068856_10000012866 569
194 3300005616 Ga0068852_100002602 Ga0068852_1000026023 569
195 3300005618 Ga0068864_100026273 Ga0068864_1000262732 569
196 3300005834 Ga0068851_10022254 Ga0068851_100222543 569
197 3300005842 Ga0068858_100065746 Ga0068858_1000657462 569
198 3300009174 Ga0105241_10025030 Ga0105241_100250304 569
199 3300009177 Ga0105248_10000168 Ga0105248_1000016843 569
200 3300013100 Ga0157373_10002877 Ga0157373_100028778 569
201 3300013102 Ga0157371_10001719 Ga0157371_1000171912 569
202 3300014325 Ga0163163_10000151 Ga0163163_1000015149 569
203 3300025904 Ga0207647_10002075 Ga0207647_100020756 569
204 3300025909 Ga0207705_10001222 Ga0207705_100012222 569
205 3300025919 Ga0207657_10000038 Ga0207657_1000003849 569
206 3300025920 Ga0207649_10000187 Ga0207649_1000018744 569
207 3300025932 Ga0207690_10000149 Ga0207690_1000014937 569
208 3300025933 Ga0207706_10000061 Ga0207706_1000006173 569
209 3300025941 Ga0207711_10001559 Ga0207711_100015592 569
210 3300025944 Ga0207661_10000125 Ga0207661_1000012545 569
211 3300025945 Ga0207679_10000564 Ga0207679_100005642 569
212 3300025949 Ga0207667_10003031 Ga0207667_100030312 569
213 3300026035 Ga0207703_10009772 Ga0207703_100097727 569
214 3300026041 Ga0207639_10000469 Ga0207639_1000046910 569
215 3300026067 Ga0207678_10002362 Ga0207678_100023624 569
216 3300026078 Ga0207702_10000323 Ga0207702_1000032324 569
217 3300026142 Ga0207698_10112379 Ga0207698_101123793 569
218 3300028379 Ga0268266_10013421 Ga0268266_100134212 569
219 3300035691 Ga0373931_0027048 Ga0373931_0027048_701_2431 569

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00916

Sulfate_transp

Sulfate permease family

36

405

0.98

PF01740

STAS

STAS domain

456

566

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
5ezb-assembly2.cif.gz_B error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.9013 430 562
6ki1-assembly2.cif.gz_B the transmembrane domain of a cyanobacterium bicarbonate transporter bica 0.8927 31 415
6ki1-assembly1.cif.gz_A the transmembrane domain of a cyanobacterium bicarbonate transporter bica 0.8793 31 415
6ki1-assembly2.cif.gz_B the transmembrane domain of a cyanobacterium bicarbonate transporter bica 0.8756 31 415
5iof-assembly1.cif.gz_A structure of the transmembrane domain of the transporter slc26dg 0.8723 37 424
ID Description Score Start End Superfamily
af_P9WGF7_437_560_3.30.750.24 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA;STAS domain 0.9652 444 565 3.30.750.24
af_A0A0R0KL09_2_75_3.30.750.24 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA;STAS domain 0.9513 503 568 3.30.750.24
af_P9WGF7_437_560_3.30.750.24 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA;STAS domain 0.9427 444 565 3.30.750.24
af_Q94LW6_488_626_3.30.750.24 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA;STAS domain 0.9401 428 561 3.30.750.24
af_I1KA21_504_648_3.30.750.24 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA;STAS domain 0.936 428 565 3.30.750.24
ID Description Score Start End GO Terms
AF-A0A2V5KGL9-F1-model_v4 Sodium-independent anion transporter 0.9918 16 401 GO:0016020
GO:0055085
AF-A0A2V6HF02-F1-model_v4 Sodium-independent anion transporter 0.9896 474 569
AF-A0A0E3VVZ2-F1-model_v4 Sulphate transport protein 0.9777 467 569 GO:0016020
GO:0055085
AF-A0A2N2SXL1-F1-model_v4 Sodium-independent anion transporter 0.9606 18 297 GO:0016020
GO:0055085
AF-A0A2V5KGL9-F1-model_v4 Sodium-independent anion transporter 0.9573 16 401 GO:0016020
GO:0055085

Feature Viewer

pLDDT pTM Quality
83.11 0.79 High
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Predicted Structure (AlphaFold2)

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