F330798

General Info

Members Datasets Scaffolds Average Seq Length
219 161 197 245

Family's Representative Sequence

Representative Sequence 3300005445|Ga0070708_100537014|Ga0070708_1005370141
Length 274
Sequence MDLALLLTVGIVMAPSLEGSRMGDRASDSTHGQPCCPILELRQYTLHPGKRDVLIELFDREFVESQEAEGMQIVGQFRDLGDPNRFVWLRGFRDMPTRAKALTAFYGGPVWKAHRQAANETMVDCDNVLLLRPAREGSGFSLGSAERPSRGALAPTGGLVIATIYDLEAGAKGDFVDFFEGRLEPALSDAGASIVGYFVTEPSANTYPALPVREGENVFVWFSRFRDQAAYERYIAALAGSPRWGGDVAKDLARRLKGHPETLKLSPTGRSRLR

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
3 2643221639 Pelomonas sp. Root1217 Isolate Unclassified
4 2643221646 Pelomonas sp. Root1237 Isolate Unclassified
5 2738541337 Pelomonas sp. BT06 Isolate Unclassified
6 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
7 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
8 2821443989 Inquilinus ginsengisoli 584 Isolate Unclassified
9 2844533157 Inquilinus sp. R-72501 v. 2 Isolate Unclassified
10 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
11 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
12 2937113482 Sinorhizobium meliloti USDA1180 Isolate Nodule
13 2957491536 Sinorhizobium meliloti USDA1804 Isolate Nodule
14 2960597568 Sinorhizobium meliloti 3085 Isolate Nodule
15 2960667422 Sinorhizobium meliloti USDA1170 Isolate Nodule
16 2960674078 Sinorhizobium meliloti USDA1666 Isolate Nodule
17 2964712639 Sinorhizobium meliloti USDA1616 Isolate Nodule
18 2970076120 Sinorhizobium meliloti USDA1706 Isolate Nodule
19 3005587118 Bradyrhizobium glycinis CNPSo 4016 Isolate Unclassified
20 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
21 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
22 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
23 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
24 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
25 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
26 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
27 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
28 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
29 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
30 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
31 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
32 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
33 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
34 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
35 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
36 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
37 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
38 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
39 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
40 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
41 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
42 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
43 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
44 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
45 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
46 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
47 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
48 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
49 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
50 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
51 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
52 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
53 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
54 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
55 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
56 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
57 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
58 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
59 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
60 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
61 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
62 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
63 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
64 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
65 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
66 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
67 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
68 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
69 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
70 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
71 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
72 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
73 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
74 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
75 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
76 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
77 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
78 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
79 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
80 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
81 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
106 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
107 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
108 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
109 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
110 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
111 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
112 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
113 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
114 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
115 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
116 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
117 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
118 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
119 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
120 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
121 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
122 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
123 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
124 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
125 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
126 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
127 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
128 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
129 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
130 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
131 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
132 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
133 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
134 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
135 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
136 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
137 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
138 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
142 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
143 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
144 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
145 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
146 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
147 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
148 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
149 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
150 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
151 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
152 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
153 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
154 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
155 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
156 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
157 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
158 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
159 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
160 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
161 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.95
Metatranscriptomes 0
Isolates 10.05

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.37
Nodule 3.2
Rhizoplane 5.02
Rhizosphere 82.65
Stem 0
Stem Tuber 0
Unclassified 7.76

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_534714 2162886007 Bacteria 12237
2 rootL2_10010713 3300003322 Bacteria 10436
3 rootH1_10016908 3300003323 Bacteria 10226
4 JGI25407J50210_10000583 3300003373 Bacteria 7384
5 JGI25405J52794_10003700 3300003911 Bacteria 2696
6 Ga0070676_10207025 3300005328 Bacteria 1289
7 Ga0070690_100160895 3300005330 Bacteria 1538
8 Ga0070670_100005888 3300005331 Bacteria 10362
9 Ga0068869_100000865 3300005334 Bacteria 17407
10 Ga0068869_100006277 3300005334 Bacteria 7526
11 Ga0070680_100289629 3300005336 Bacteria 1388
12 Ga0068868_100056071 3300005338 Bacteria 3111
13 Ga0068868_100094848 3300005338 Bacteria 2408
14 Ga0068868_100306105 3300005338 Bacteria 1351
15 Ga0070687_100254123 3300005343 Bacteria 1093
16 Ga0070669_100009853 3300005353 Bacteria 6806
17 Ga0070671_100308991 3300005355 Bacteria 1346
18 Ga0070673_100029391 3300005364 Bacteria 4098
19 Ga0070667_100047986 3300005367 Bacteria 3593
20 Ga0070714_100497874 3300005435 Bacteria 1162
21 Ga0070705_100012106 3300005440 Bacteria 4374
22 Ga0070708_100537014 3300005445 Unclassified 1103
23 Ga0068867_100028584 3300005459 Bacteria 4016
24 Ga0070706_100003101 3300005467 Bacteria 16466
25 Ga0070707_100001227 3300005468 Bacteria 25177
26 Ga0070707_100144880 3300005468 Bacteria 2312
27 Ga0070698_100015654 3300005471 Bacteria 8011
28 Ga0070698_100039585 3300005471 Bacteria 4851
29 Ga0070699_100002761 3300005518 Bacteria 15654
30 Ga0070697_100639310 3300005536 Unclassified 937
31 Ga0070672_100245040 3300005543 Bacteria 1508
32 Ga0070672_100437414 3300005543 Bacteria 1125
33 Ga0070695_100362652 3300005545 Bacteria 1089
34 Ga0070704_100229455 3300005549 Unclassified 1514
35 Ga0068855_100242612 3300005563 Bacteria 2013
36 Ga0068857_100008978 3300005577 Bacteria 8663
37 Ga0068859_100001747 3300005617 Bacteria 22150
38 Ga0068864_100019509 3300005618 Bacteria 5670
39 Ga0068861_100000564 3300005719 Bacteria 21995
40 Ga0068863_100027276 3300005841 Bacteria 5447
41 Ga0068863_100114545 3300005841 Bacteria 2569
42 Ga0068858_100011382 3300005842 Bacteria 8401
43 Ga0068860_100023477 3300005843 Bacteria 5960
44 Ga0068862_100027968 3300005844 Bacteria 4749
45 Ga0068862_100038452 3300005844 Bacteria 4058
46 Ga0081455_10013563 3300005937 Bacteria 8034
47 Ga0081455_10016691 3300005937 Bacteria 7073
48 Ga0081455_10019137 3300005937 Bacteria 6489
49 Ga0081455_10182586 3300005937 Bacteria 1587
50 Ga0081538_10002410 3300005981 Bacteria 18360
51 Ga0081538_10027424 3300005981 Bacteria 3949
52 Ga0081540_1010550 3300005983 Bacteria 6244
53 Ga0070717_10020506 3300006028 Bacteria 5200
54 Ga0075428_100016648 3300006844 Bacteria 8119
55 Ga0075428_100409644 3300006844 Bacteria 1453
56 Ga0075430_100024826 3300006846 Bacteria 5099
57 Ga0075430_100301263 3300006846 Bacteria 1326
58 Ga0075431_100013543 3300006847 Bacteria 8241
59 Ga0075431_100093181 3300006847 Unclassified 3109
60 Ga0075431_100102720 3300006847 Unclassified 2950
61 Ga0075429_100033644 3300006880 Bacteria 4454
62 Ga0075429_100147744 3300006880 Bacteria 2057
63 Ga0075429_100187717 3300006880 Bacteria 1811
64 Ga0075429_100194628 3300006880 Bacteria 1776
65 Ga0075429_100345741 3300006880 Bacteria 1302
66 Ga0097620_100001747 3300006931 Bacteria 22150
67 Ga0105245_10170775 3300009098 Bacteria 2071
68 Ga0105245_10315768 3300009098 Bacteria 1538
69 Ga0105247_10032842 3300009101 Bacteria 3154
70 Ga0114129_10008718 3300009147 Bacteria 14454
71 Ga0114129_10048083 3300009147 Bacteria 5994
72 Ga0114129_10562037 3300009147 Bacteria 1482
73 Ga0105241_10087217 3300009174 Bacteria 2456
74 Ga0105248_10016230 3300009177 Bacteria 8198
75 Ga0105248_10164760 3300009177 Bacteria 2499
76 Ga0105249_10034877 3300009553 Bacteria 4561
77 Ga0105249_10038647 3300009553 Unclassified 4331
78 Ga0105239_10130656 3300010375 Bacteria 2793
79 Ga0157369_10643446 3300013105 Unclassified 1094
80 Ga0157378_10119117 3300013297 Bacteria 2431
81 Ga0157378_10535125 3300013297 Bacteria 1175
82 Ga0157378_11181606 3300013297 Unclassified 804
83 Ga0157372_10037935 3300013307 Bacteria 5317
84 Ga0157372_10671322 3300013307 Unclassified 1206
85 Ga0157375_10246774 3300013308 Unclassified 1946
86 Ga0163163_10063591 3300014325 Bacteria 3659
87 Ga0163163_10545769 3300014325 Bacteria 1222
88 Ga0157380_10004889 3300014326 Bacteria 9336
89 Ga0157380_10018202 3300014326 Bacteria 5213
90 Ga0157379_10001057 3300014968 Bacteria 22428
91 Ga0157376_10004984 3300014969 Bacteria 9257
92 Ga0163161_10409411 3300017792 Bacteria 1089
93 Ga0207710_10026342 3300025900 Bacteria 2512
94 Ga0207680_10243400 3300025903 Bacteria 1240
95 Ga0207684_10010124 3300025910 Bacteria 8305
96 Ga0207660_10171746 3300025917 Bacteria 1678
97 Ga0207662_10220297 3300025918 Bacteria 1235
98 Ga0207646_10001693 3300025922 Bacteria 26800
99 Ga0207646_10078385 3300025922 Bacteria 2954
100 Ga0207650_10078347 3300025925 Bacteria 2500
101 Ga0207691_10149491 3300025940 Bacteria 2054
102 Ga0207711_10020124 3300025941 Bacteria 5561
103 Ga0207689_10000174 3300025942 Bacteria 56242
104 Ga0207679_10046644 3300025945 Bacteria 3142
105 Ga0207667_10213660 3300025949 Bacteria 1977
106 Ga0207651_10018511 3300025960 Bacteria 4148
107 Ga0207658_10022695 3300025986 Bacteria 4371
108 Ga0207677_10024291 3300026023 Bacteria 3762
109 Ga0207677_10048409 3300026023 Bacteria 2862
110 Ga0207677_10215302 3300026023 Bacteria 1537
111 Ga0207703_10031307 3300026035 Bacteria 4205
112 Ga0207639_10237055 3300026041 Bacteria 1584
113 Ga0207641_10363177 3300026088 Bacteria 1383
114 Ga0207648_10001922 3300026089 Bacteria 22701
115 Ga0207676_10032003 3300026095 Bacteria 3959
116 Ga0207674_10026124 3300026116 Bacteria 6212
117 Ga0207674_10519662 3300026116 Unclassified 1150
118 Ga0207675_100000847 3300026118 Bacteria 30430
119 Ga0207675_100029796 3300026118 Bacteria 5081
120 Ga0268265_10077088 3300028380 Bacteria 2617
121 Ga0268265_10227663 3300028380 Unclassified 1636
122 Ga0268264_10002310 3300028381 Bacteria 16863
123 Ga0307515_10246817 3300028794 Bacteria 1545
124 Ga0307512_10012934 3300030522 Bacteria 7846
125 Ga0307516_10051582 3300031730 Bacteria 4031
126 Ga0307518_10000093 3300031838 Bacteria 61707
127 Ga0326468_10003869 3300031889 Bacteria 1287
128 Ga0307416_100256127 3300032002 Bacteria 1707
129 Ga0307416_100322425 3300032002 Bacteria 1548
130 Ga0307415_100127211 3300032126 Bacteria 1922
131 Ga0307415_100221001 3300032126 Unclassified 1519
132 Ga0307507_10008263 3300033179 Bacteria 14519
133 Ga0307507_10026370 3300033179 Bacteria 6267
134 Ga0373926_0133987 3300035083 Bacteria 939
135 Ga0373943_0003501 3300035170 Bacteria 7152
136 Ga0373946_0067253 3300035171 Bacteria 1538
137 Ga0373935_0009130 3300035692 Bacteria 5933
138 Ga0373947_0007895 3300035725 Bacteria 6140
139 Ga0373925_0007688 3300037068 Bacteria 7850
140 Ga0395900_0000125 3300037418 Bacteria 130214
141 Ga0395900_0112452 3300037418 Bacteria 2796
142 Ga0395898_0001658 3300037466 Bacteria 29919
143 Ga0395898_0059302 3300037466 Bacteria 3724
144 Ga0395905_0000125 3300037471 Bacteria 126341
145 Ga0395905_0001587 3300037471 Bacteria 27075
146 Ga0395905_0498602 3300037471 Bacteria 1118
147 Ga0395901_0213053 3300038443 Bacteria 2021
148 Ga0439464_0011433 3300042439 Bacteria 2353
149 Ga0453683_0177563 3300044673 Unclassified 1350
150 Ga0466963_0042797 3300044694 Bacteria 2975
151 Ga0466963_0416002 3300044694 Bacteria 948
152 Ga0466957_0144349 3300044842 Bacteria 1535
153 Ga0466959_0115640 3300045049 Bacteria 1911
154 Ga0451576_0015517 3300045051 Bacteria 8434
155 Ga0495658_0191026 3300046683 Bacteria 1273
156 Ga0495604_0158516 3300047317 Bacteria 1601
157 Ga0496102_0001128 3300048905 Bacteria 24505
158 Ga0496102_0157298 3300048905 Bacteria 2136
159 Ga0496102_0824554 3300048905 Unclassified 850
160 Ga0496103_0338428 3300048906 Bacteria 968
161 Ga0496106_0073176 3300048909 Bacteria 2621
162 Ga0496107_0019730 3300048910 Bacteria 4758
163 Ga0496108_0405269 3300048911 Bacteria 1191
164 Ga0496108_0569017 3300048911 Unclassified 988
165 Ga0496109_0514826 3300048912 Bacteria 1129
166 Ga0496112_0147975 3300048915 Bacteria 2316
167 Ga0501039_0045545 3300049575 Bacteria 3389
168 Ga0501042_0046601 3300049578 Bacteria 3091
169 Ga0501048_0032120 3300049582 Bacteria 3796
170 Ga0501068_0342353 3300049584 Bacteria 960
171 Ga0501072_0174922 3300049588 Bacteria 1712
172 Ga0501072_0557045 3300049588 Bacteria 905
173 Ga0501074_0114109 3300049590 Bacteria 1933
174 Ga0501075_0337723 3300049591 Bacteria 1148
175 Ga0501076_0077783 3300049592 Bacteria 2662
176 Ga0501079_0145014 3300049741 Bacteria 1850
177 Ga0501079_0153945 3300049741 Bacteria 1792
178 Ga0501079_0556275 3300049741 Bacteria 902
179 Ga0501079_0562272 3300049741 Bacteria 897
180 Ga0501045_0018987 3300049824 Bacteria 4896
181 nmdc:mga05p37_22415_c1 3300050507 Bacteria 7661
182 nmdc:mga05p37_231039_c1 3300050507 Unclassified 2229
183 nmdc:mga09592_181535_c1 3300050508 Unclassified 1821
184 nmdc:mga09592_19774_c1 3300050508 Bacteria 5531
185 nmdc:mga09592_241507_c1 3300050508 Bacteria 1565
186 nmdc:mga09592_31611_c1 3300050508 Bacteria 4411
187 nmdc:mga09592_3566_c1 3300050508 Bacteria 12568
188 nmdc:mga06r32_222737_c1 3300050510 Bacteria 1875
189 nmdc:mga06r32_378250_c1 3300050510 Bacteria 1399
190 nmdc:mga06r32_401875_c1 3300050510 Bacteria 1352
191 nmdc:mga0n895_984138_c1 3300050512 Bacteria 825
192 Ga0500644_0118532 3300053088 Bacteria 1029
193 Ga0500568_0001025 3300053139 Bacteria 19120
194 Ga0500577_0037253 3300053142 Bacteria 1747
195 Ga0501082_0057275 3300060353 Bacteria 3358
196 Ga0466962_0015808 3300061719 Bacteria 3641
197 Ga0530510_0044887 3300061734 Bacteria 3194

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049741 Ga0501079_0556275 Ga0501079_0556275_306_881 191
2 3300048906 Ga0496103_0338428 Ga0496103_0338428_322_933 203
3 3300005841 Ga0068863_100027276 Ga0068863_1000272762 206
4 3300009177 Ga0105248_10164760 Ga0105248_101647603 206
5 3300014325 Ga0163163_10545769 Ga0163163_105457692 206
6 3300026088 Ga0207641_10363177 Ga0207641_103631772 206
7 3300048915 Ga0496112_0147975 Ga0496112_0147975_1171_1830 206
8 3300013297 Ga0157378_10535125 Ga0157378_105351252 220
9 3300033179 Ga0307507_10026370 Ga0307507_100263702 220
10 iso_pu_bacteria 2861520306 2861527102 220
11 3300013308 Ga0157375_10246774 Ga0157375_102467742 222
12 3300014326 Ga0157380_10018202 Ga0157380_100182027 222
13 3300032126 Ga0307415_100127211 Ga0307415_1001272113 222
14 3300044694 Ga0466963_0042797 Ga0466963_0042797_65_841 222
15 3300048905 Ga0496102_0824554 Ga0496102_0824554_55_726 222
16 3300035083 Ga0373926_0133987 Ga0373926_0133987_159_836 224
17 3300035170 Ga0373943_0003501 Ga0373943_0003501_3217_3894 224
18 3300035171 Ga0373946_0067253 Ga0373946_0067253_466_1143 224
19 3300035692 Ga0373935_0009130 Ga0373935_0009130_3046_3723 224
20 3300035725 Ga0373947_0007895 Ga0373947_0007895_4764_5441 224
21 3300037068 Ga0373925_0007688 Ga0373925_0007688_1435_2112 224
22 3300045051 Ga0451576_0015517 Ga0451576_0015517_4344_5024 224
23 3300013297 Ga0157378_11181606 Ga0157378_111816061 225
24 3300028794 Ga0307515_10246817 Ga0307515_102468172 225
25 3300046683 Ga0495658_0191026 Ga0495658_0191026_23_700 225
26 3300048911 Ga0496108_0405269 Ga0496108_0405269_416_1096 226
27 3300005981 Ga0081538_10002410 Ga0081538_100024105 227
28 iso_pu_bacteria 2585427649 2586061228 227
29 3300005545 Ga0070695_100362652 Ga0070695_1003626522 228
30 3300048909 Ga0496106_0073176 Ga0496106_0073176_1273_2025 228
31 3300048910 Ga0496107_0019730 Ga0496107_0019730_2244_2996 228
32 3300030522 Ga0307512_10012934 Ga0307512_100129342 229
33 3300047317 Ga0495604_0158516 Ga0495604_0158516_187_900 229
34 3300053088 Ga0500644_0118532 Ga0500644_0118532_67_756 229
35 3300053142 Ga0500577_0037253 Ga0500577_0037253_309_998 229
36 3300006880 Ga0075429_100345741 Ga0075429_1003457412 230
37 3300031838 Ga0307518_10000093 Ga0307518_1000009315 231
38 3300031889 Ga0326468_10003869 Ga0326468_100038691 231
39 3300033179 Ga0307507_10008263 Ga0307507_1000826311 231
40 3300037471 Ga0395905_0000125 Ga0395905_0000125_68702_69424 232
41 iso_pu_bacteria 2643221639 2644218673 232
42 iso_pu_bacteria 2643221646 2644256769 232
43 iso_pu_bacteria 2738541337 2739058054 232
44 iso_pu_bacteria 2870721527 2870722246 233
45 3300003322 rootL2_10010713 rootL2_100107139 234
46 3300003323 rootH1_10016908 rootH1_1001690813 234
47 3300003373 JGI25407J50210_10000583 JGI25407J50210_100005834 234
48 3300005937 Ga0081455_10013563 Ga0081455_1001356310 234
49 3300006844 Ga0075428_100016648 Ga0075428_10001664813 234
50 3300006846 Ga0075430_100024826 Ga0075430_1000248266 234
51 3300006847 Ga0075431_100013543 Ga0075431_1000135435 234
52 3300006880 Ga0075429_100187717 Ga0075429_1001877172 234
53 3300037471 Ga0395905_0001587 Ga0395905_0001587_9781_10509 234
54 3300042439 Ga0439464_0011433 Ga0439464_0011433_1518_2228 234
55 3300044694 Ga0466963_0416002 Ga0466963_0416002_79_861 234
56 3300044842 Ga0466957_0144349 Ga0466957_0144349_403_1185 234
57 3300045049 Ga0466959_0115640 Ga0466959_0115640_715_1497 234
58 3300049584 Ga0501068_0342353 Ga0501068_0342353_205_918 234
59 3300049591 Ga0501075_0337723 Ga0501075_0337723_398_1111 234
60 3300049592 Ga0501076_0077783 Ga0501076_0077783_359_1072 234
61 3300049741 Ga0501079_0145014 Ga0501079_0145014_777_1490 234
62 3300050508 nmdc:mga09592_241507_c1 nmdc:mga09592_241507_c1_534_1244 234
63 3300050510 nmdc:mga06r32_222737_c1 nmdc:mga06r32_222737_c1_773_1483 234
64 3300061719 Ga0466962_0015808 Ga0466962_0015808_2031_2813 234
65 iso_pu_bacteria 2791354901 2791913997 235
66 3300013105 Ga0157369_10643446 Ga0157369_106434461 236
67 3300013307 Ga0157372_10671322 Ga0157372_106713222 236
68 3300050512 nmdc:mga0n895_984138_c1 nmdc:mga0n895_984138_c1_56_781 238
69 3300031730 Ga0307516_10051582 Ga0307516_100515823 239
70 3300037466 Ga0395898_0059302 Ga0395898_0059302_484_1251 239
71 3300038443 Ga0395901_0213053 Ga0395901_0213053_692_1459 239
72 iso_pu_bacteria 2844533157 2844540376 239
73 3300026041 Ga0207639_10237055 Ga0207639_102370552 240
74 iso_pu_bacteria 2791355406 2793980119 240
75 iso_pu_bacteria 2821443989 2821447884 240
76 iso_pu_bacteria 8047893842 8047903318 240
77 iso_pu_bacteria 8048356638 8048365909 240
78 iso_pu_bacteria 8048369669 8048379242 240
79 iso_pu_bacteria 8048379754 8048388348 240
80 3300037418 Ga0395900_0112452 Ga0395900_0112452_1769_2545 241
81 3300005334 Ga0068869_100006277 Ga0068869_1000062774 242
82 3300005338 Ga0068868_100056071 Ga0068868_1000560714 242
83 3300005338 Ga0068868_100094848 Ga0068868_1000948483 242
84 3300005468 Ga0070707_100144880 Ga0070707_1001448802 242
85 3300005471 Ga0070698_100039585 Ga0070698_1000395853 242
86 3300005563 Ga0068855_100242612 Ga0068855_1002426123 242
87 3300009098 Ga0105245_10315768 Ga0105245_103157682 242
88 3300009174 Ga0105241_10087217 Ga0105241_100872174 242
89 3300013307 Ga0157372_10037935 Ga0157372_100379352 242
90 3300014969 Ga0157376_10004984 Ga0157376_100049844 242
91 3300025922 Ga0207646_10078385 Ga0207646_100783854 242
92 3300025949 Ga0207667_10213660 Ga0207667_102136602 242
93 3300026023 Ga0207677_10024291 Ga0207677_100242914 242
94 3300026023 Ga0207677_10048409 Ga0207677_100484092 242
95 3300053139 Ga0500568_0001025 Ga0500568_0001025_3281_4063 242
96 3300005435 Ga0070714_100497874 Ga0070714_1004978741 243
97 3300037418 Ga0395900_0000125 Ga0395900_0000125_123586_124377 243
98 3300037466 Ga0395898_0001658 Ga0395898_0001658_15770_16561 243
99 3300005328 Ga0070676_10207025 Ga0070676_102070252 244
100 3300005330 Ga0070690_100160895 Ga0070690_1001608951 244
101 3300005331 Ga0070670_100005888 Ga0070670_1000058888 244
102 3300005334 Ga0068869_100000865 Ga0068869_10000086512 244
103 3300005338 Ga0068868_100306105 Ga0068868_1003061052 244
104 3300005343 Ga0070687_100254123 Ga0070687_1002541232 244
105 3300005353 Ga0070669_100009853 Ga0070669_1000098532 244
106 3300005355 Ga0070671_100308991 Ga0070671_1003089912 244
107 3300005364 Ga0070673_100029391 Ga0070673_1000293913 244
108 3300005367 Ga0070667_100047986 Ga0070667_1000479863 244
109 3300005440 Ga0070705_100012106 Ga0070705_1000121065 244
110 3300005459 Ga0068867_100028584 Ga0068867_1000285844 244
111 3300005543 Ga0070672_100437414 Ga0070672_1004374141 244
112 3300005577 Ga0068857_100008978 Ga0068857_1000089783 244
113 3300005617 Ga0068859_100001747 Ga0068859_10000174716 244
114 3300005618 Ga0068864_100019509 Ga0068864_1000195093 244
115 3300005719 Ga0068861_100000564 Ga0068861_1000005649 244
116 3300005841 Ga0068863_100114545 Ga0068863_1001145453 244
117 3300005842 Ga0068858_100011382 Ga0068858_10001138210 244
118 3300005843 Ga0068860_100023477 Ga0068860_1000234776 244
119 3300005844 Ga0068862_100027968 Ga0068862_1000279684 244
120 3300006931 Ga0097620_100001747 Ga0097620_1000017479 244
121 3300009098 Ga0105245_10170775 Ga0105245_101707753 244
122 3300009101 Ga0105247_10032842 Ga0105247_100328423 244
123 3300009177 Ga0105248_10016230 Ga0105248_100162309 244
124 3300009553 Ga0105249_10034877 Ga0105249_100348774 244
125 3300013297 Ga0157378_10119117 Ga0157378_101191173 244
126 3300014325 Ga0163163_10063591 Ga0163163_100635914 244
127 3300014968 Ga0157379_10001057 Ga0157379_100010577 244
128 3300017792 Ga0163161_10409411 Ga0163161_104094111 244
129 3300025900 Ga0207710_10026342 Ga0207710_100263422 244
130 3300025903 Ga0207680_10243400 Ga0207680_102434002 244
131 3300025918 Ga0207662_10220297 Ga0207662_102202972 244
132 3300025925 Ga0207650_10078347 Ga0207650_100783472 244
133 3300025940 Ga0207691_10149491 Ga0207691_101494913 244
134 3300025941 Ga0207711_10020124 Ga0207711_100201246 244
135 3300025942 Ga0207689_10000174 Ga0207689_1000017445 244
136 3300025945 Ga0207679_10046644 Ga0207679_100466443 244
137 3300025960 Ga0207651_10018511 Ga0207651_100185113 244
138 3300025986 Ga0207658_10022695 Ga0207658_100226952 244
139 3300026023 Ga0207677_10215302 Ga0207677_102153022 244
140 3300026035 Ga0207703_10031307 Ga0207703_100313074 244
141 3300026089 Ga0207648_10001922 Ga0207648_1000192223 244
142 3300026095 Ga0207676_10032003 Ga0207676_100320033 244
143 3300026116 Ga0207674_10026124 Ga0207674_100261244 244
144 3300026118 Ga0207675_100000847 Ga0207675_10000084723 244
145 3300028380 Ga0268265_10077088 Ga0268265_100770882 244
146 3300028381 Ga0268264_10002310 Ga0268264_1000231010 244
147 3300048905 Ga0496102_0001128 Ga0496102_0001128_7394_8206 244
148 3300048905 Ga0496102_0157298 Ga0496102_0157298_402_1136 244
149 3300048911 Ga0496108_0569017 Ga0496108_0569017_61_795 244
150 3300048912 Ga0496109_0514826 Ga0496109_0514826_175_909 244
151 iso_pu_bacteria 3005587118 3005587978 244
152 3300005445 Ga0070708_100537014 Ga0070708_1005370141 245
153 3300005543 Ga0070672_100245040 Ga0070672_1002450402 245
154 3300005844 Ga0068862_100038452 Ga0068862_1000384523 245
155 3300006844 Ga0075428_100409644 Ga0075428_1004096442 245
156 3300006880 Ga0075429_100194628 Ga0075429_1001946282 245
157 3300014326 Ga0157380_10004889 Ga0157380_100048893 245
158 3300026118 Ga0207675_100029796 Ga0207675_1000297965 245
159 3300050508 nmdc:mga09592_31611_c1 nmdc:mga09592_31611_c1_823_1584 245
160 3300003911 JGI25405J52794_10003700 JGI25405J52794_100037003 246
161 3300005937 Ga0081455_10016691 Ga0081455_100166914 246
162 3300005937 Ga0081455_10019137 Ga0081455_100191376 246
163 3300005937 Ga0081455_10182586 Ga0081455_101825862 246
164 3300005981 Ga0081538_10027424 Ga0081538_100274244 246
165 3300005983 Ga0081540_1010550 Ga0081540_10105505 246
166 3300010375 Ga0105239_10130656 Ga0105239_101306562 246
167 3300032002 Ga0307416_100322425 Ga0307416_1003224252 246
168 3300037471 Ga0395905_0498602 Ga0395905_0498602_277_1047 246
169 3300049575 Ga0501039_0045545 Ga0501039_0045545_974_1765 246
170 3300049578 Ga0501042_0046601 Ga0501042_0046601_2264_3055 246
171 3300049582 Ga0501048_0032120 Ga0501048_0032120_716_1507 246
172 3300049588 Ga0501072_0174922 Ga0501072_0174922_830_1621 246
173 3300049588 Ga0501072_0557045 Ga0501072_0557045_30_854 246
174 3300049590 Ga0501074_0114109 Ga0501074_0114109_853_1644 246
175 3300049741 Ga0501079_0153945 Ga0501079_0153945_614_1405 246
176 3300049741 Ga0501079_0562272 Ga0501079_0562272_26_850 246
177 3300049824 Ga0501045_0018987 Ga0501045_0018987_3087_3878 246
178 3300060353 Ga0501082_0057275 Ga0501082_0057275_1514_2308 246
179 3300061734 Ga0530510_0044887 Ga0530510_0044887_2144_2935 246
180 3300005518 Ga0070699_100002761 Ga0070699_1000027617 247
181 3300005549 Ga0070704_100229455 Ga0070704_1002294552 247
182 3300006847 Ga0075431_100102720 Ga0075431_1001027203 247
183 3300009147 Ga0114129_10048083 Ga0114129_100480832 247
184 3300009147 Ga0114129_10562037 Ga0114129_105620373 247
185 3300050507 nmdc:mga05p37_231039_c1 nmdc:mga05p37_231039_c1_367_1110 247
186 3300050508 nmdc:mga09592_181535_c1 nmdc:mga09592_181535_c1_712_1455 247
187 3300050510 nmdc:mga06r32_401875_c1 nmdc:mga06r32_401875_c1_596_1339 247
188 2162886007 SwRhRL2b_contig_534714 SwRhRL2b_0783.00005180 248
189 3300005336 Ga0070680_100289629 Ga0070680_1002896292 248
190 3300005467 Ga0070706_100003101 Ga0070706_10000310115 248
191 3300005468 Ga0070707_100001227 Ga0070707_1000012275 248
192 3300005471 Ga0070698_100015654 Ga0070698_1000156544 248
193 3300005536 Ga0070697_100639310 Ga0070697_1006393101 248
194 3300006028 Ga0070717_10020506 Ga0070717_100205065 248
195 3300006846 Ga0075430_100301263 Ga0075430_1003012632 248
196 3300006847 Ga0075431_100093181 Ga0075431_1000931814 248
197 3300006880 Ga0075429_100033644 Ga0075429_1000336446 248
198 3300006880 Ga0075429_100147744 Ga0075429_1001477442 248
199 3300009147 Ga0114129_10008718 Ga0114129_1000871813 248
200 3300009553 Ga0105249_10038647 Ga0105249_100386472 248
201 3300025910 Ga0207684_10010124 Ga0207684_100101249 248
202 3300025917 Ga0207660_10171746 Ga0207660_101717462 248
203 3300025922 Ga0207646_10001693 Ga0207646_1000169322 248
204 3300026116 Ga0207674_10519662 Ga0207674_105196622 248
205 3300028380 Ga0268265_10227663 Ga0268265_102276632 248
206 3300032002 Ga0307416_100256127 Ga0307416_1002561272 248
207 3300032126 Ga0307415_100221001 Ga0307415_1002210012 248
208 3300044673 Ga0453683_0177563 Ga0453683_0177563_450_1196 248
209 3300050507 nmdc:mga05p37_22415_c1 nmdc:mga05p37_22415_c1_686_1432 248
210 3300050508 nmdc:mga09592_19774_c1 nmdc:mga09592_19774_c1_1323_2069 248
211 3300050508 nmdc:mga09592_3566_c1 nmdc:mga09592_3566_c1_6427_7173 248
212 3300050510 nmdc:mga06r32_378250_c1 nmdc:mga06r32_378250_c1_440_1186 248
213 iso_pu_bacteria 2937113482 2937113931 248
214 iso_pu_bacteria 2957491536 2957492595 248
215 iso_pu_bacteria 2960597568 2960601733 248
216 iso_pu_bacteria 2960667422 2960671689 248
217 iso_pu_bacteria 2960674078 2960680492 248
218 iso_pu_bacteria 2964712639 2964714545 248
219 iso_pu_bacteria 2970076120 2970077623 248

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07978

NIPSNAP

NIPSNAP

39

135

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ap6-assembly1.cif.gz_A x-ray crystal structure of protein atu4242 from agrobacterium tumefaciens. northeast strucutral genomics consortium target atr43. 0.8974 9 107
1vqy-assembly1.cif.gz_C crystal structure of a nipsnap family protein (atu5224) from agrobacterium tumefaciens str. c58 at 2.40 a resolution 0.8928 9 108
5ixu-assembly1.cif.gz_A crystal structure of an uncharacterized nipsnap domain protein from burkholderia xenovorans 0.8765 9 102
5k9f-assembly1.cif.gz_A crystal structure of a nipsnap domain protein from burkholderia xenovorans 0.8715 9 108
1vqy-assembly1.cif.gz_B crystal structure of a nipsnap family protein (atu5224) from agrobacterium tumefaciens str. c58 at 2.40 a resolution 0.8574 1 103
ID Description Score Start End Superfamily
1vqyA00 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.888 9 108 3.30.70.100
5ixuA00 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.8765 9 102 3.30.70.100
5k9fA00 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.8715 9 108 3.30.70.100
1vqyA00 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.848 9 108 3.30.70.100
af_F6NVH9_176_279_3.30.70.100 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.8476 9 106 3.30.70.100
ID Description Score Start End GO Terms
AF-A0A411HGV6-F1-model_v4 NIPSNAP family containing protein 0.9943 5 245
AF-A0A3S1XWT3-F1-model_v4 deleted 0.9924 7 92
AF-A0A3S1WPE7-F1-model_v4 deleted 0.9915 7 103
AF-A0A2V6CCU4-F1-model_v4 NIPSNAP domain-containing protein 0.988 4 246
AF-A0A5B2XJI3-F1-model_v4 NIPSNAP family protein 0.9864 7 244

Feature Viewer

pLDDT pTM Quality
93.69 0.9 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map