F330625

General Info

Members Datasets Scaffolds Average Seq Length
219 137 206 364

Family's Representative Sequence

Representative Sequence 3300003320|rootH2_10001238|rootH2_1000123823
Length 398
Sequence MPELRTGMRMNFNSSRKISYIRTAIFTPEQVRMTVKIKDVTDYLESIAPRSYQESYDNAGLITGNSSWTVTGILVTLDCVEAVIEEAITSQCNLIVAHHPIVFRGLKKLNGNNYVERTVIKAIKHDIAIHAIHTNLDNVHTGVNRKICEKIGLKNLKILQPKKDTLSKLVTFIPTQHAEAVLGALHQAGAGQIGNYKNCSFRTEGTGTFMPNESASPHIGEANQQEFVKEVRAEVIFPTHLEGKLLQALRSVHPYEEVAYYSSILSNENQEVGSGMTGELETPVEPLAFLQGLKISMDLQVIRHTKIKSGPVKKVAVCGGSGSFLLPQAIQSGADMFITADFKYHEFFDADGRITIADIGHYESEVFTKELLQDVLMKKFSTFAIIFSKTVTNPISYL

Samples

Sample ID Description Type Environment
1 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
2 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
3 2884634485 Algoriphagus kandeliae XY-J91 Isolate Unclassified
4 2890737413 Parapedobacter sp. SGR-10 Isolate Rhizosphere
5 2898713307 Sphingobacterium sp. SGG-5 Isolate Rhizosphere
6 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
7 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere
8 2914759650 Rhizosphaericola mali Isolate Rhizosphere
9 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
10 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere
11 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
12 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
13 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
14 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
15 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
16 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
17 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
18 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
19 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
20 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
21 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
22 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
23 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
24 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
25 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
26 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
27 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
28 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
29 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
30 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
31 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
32 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
33 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
34 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
35 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
36 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
37 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
38 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
39 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
40 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
41 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
42 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
43 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
44 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
47 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
48 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
51 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
52 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
53 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
54 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
55 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
58 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
59 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
60 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
78 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
79 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
80 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
81 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
82 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
83 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
84 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
85 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
86 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
87 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
88 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
89 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
90 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
91 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
92 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
93 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
94 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
95 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
96 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
97 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
98 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
99 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
100 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
101 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
102 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
103 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
104 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
105 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
106 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
107 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
108 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
109 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
110 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
111 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
112 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
113 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
114 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
115 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
116 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
117 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
118 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
119 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
120 3300049670 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought Metagenome Rhizosphere
121 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
122 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
123 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
124 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
125 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
126 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
127 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
128 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
129 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
130 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
131 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
132 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
133 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
134 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
135 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
136 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
137 8055588893 Parapedobacter lycopersici KACC 18788 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.61
Metatranscriptomes 0.46
Isolates 5.94

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.96
Nodule 0
Rhizoplane 0
Rhizosphere 79
Stem 0
Stem Tuber 0
Unclassified 10.05

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10012335 3300001979 Bacteria 3224
2 JGI24737J22298_10000210 3300001990 Bacteria 19077
3 JGI24735J21928_10000011 3300002067 Bacteria 217841
4 JGI25162J39368_1000055 3300002737 Bacteria 147236
5 rootH2_10001238 3300003320 Bacteria 18841
6 rootH2_10113780 3300003320 Bacteria 5016
7 rootH2_10190577 3300003320 Bacteria 3996
8 rootL2_10010945 3300003322 Bacteria 1931
9 rootL2_10019883 3300003322 Bacteria 6015
10 rootL2_10075085 3300003322 Bacteria 5902
11 rootL2_10208314 3300003322 Bacteria 1512
12 rootH1_10004025 3300003323 Bacteria 14647
13 rootH1_10059311 3300003323 Bacteria 8910
14 Ga0055536_1019099 3300003781 Bacteria 2169
15 Ga0055531_10001456 3300003794 Bacteria 17441
16 Ga0065165_1000324 3300005262 Bacteria 77785
17 Ga0065165_1000703 3300005262 Bacteria 47554
18 Ga0065704_10073385 3300005289 Bacteria 7220
19 Ga0065704_10084678 3300005289 Bacteria 3307
20 Ga0070658_10114135 3300005327 Bacteria 2240
21 Ga0070670_100038996 3300005331 Bacteria 4085
22 Ga0070680_100240662 3300005336 Bacteria 1529
23 Ga0070682_100064221 3300005337 Bacteria 2330
24 Ga0070660_100001218 3300005339 Bacteria 17473
25 Ga0070660_100215330 3300005339 Bacteria 1560
26 Ga0070675_100011307 3300005354 Bacteria 6986
27 Ga0070671_100005411 3300005355 Bacteria 10184
28 Ga0070674_100059258 3300005356 Bacteria 2665
29 Ga0070659_100001600 3300005366 Bacteria 16305
30 Ga0070659_100029209 3300005366 Bacteria 4261
31 Ga0070662_100000050 3300005457 Bacteria 64208
32 Ga0070681_10122356 3300005458 Bacteria 2535
33 Ga0070681_10381267 3300005458 Bacteria 1321
34 Ga0070679_100006928 3300005530 Bacteria 10572
35 Ga0070679_100359881 3300005530 Unclassified 1402
36 Ga0070684_100227996 3300005535 Bacteria 1701
37 Ga0070665_100296355 3300005548 Bacteria 1620
38 Ga0068855_100000156 3300005563 Bacteria 86845
39 Ga0068855_100106155 3300005563 Bacteria 3228
40 Ga0068855_100200819 3300005563 Bacteria 2244
41 Ga0068855_100434812 3300005563 Bacteria 1434
42 Ga0068857_100136155 3300005577 Bacteria 2217
43 Ga0068856_100063375 3300005614 Bacteria 3652
44 Ga0068852_100053074 3300005616 Bacteria 3488
45 Ga0068864_100357162 3300005618 Bacteria 1380
46 Ga0075366_10000381 3300006195 Bacteria 20569
47 Ga0068865_100094682 3300006881 Bacteria 2174
48 Ga0105240_10001738 3300009093 Bacteria 36787
49 Ga0105240_10008050 3300009093 Bacteria 15169
50 Ga0105240_10013581 3300009093 Bacteria 11175
51 Ga0105240_10042937 3300009093 Bacteria 5759
52 Ga0105240_10288762 3300009093 Unclassified 1881
53 Ga0105243_10000046 3300009148 Bacteria 155277
54 Ga0105241_10018847 3300009174 Bacteria 5084
55 Ga0105241_10057948 3300009174 Bacteria 2973
56 Ga0105241_10063488 3300009174 Bacteria 2850
57 Ga0105237_10000143 3300009545 Bacteria 101515
58 Ga0105237_10000753 3300009545 Bacteria 44372
59 Ga0105237_10025036 3300009545 Bacteria 6104
60 Ga0105237_10027555 3300009545 Bacteria 5798
61 Ga0105239_10000069 3300010375 Bacteria 144493
62 Ga0105239_10004713 3300010375 Bacteria 16192
63 Ga0105239_10009481 3300010375 Bacteria 10966
64 Ga0105239_10011768 3300010375 Bacteria 9766
65 Ga0105239_10102369 3300010375 Bacteria 3169
66 Ga0105239_10662176 3300010375 Bacteria 1193
67 Ga0157373_10008407 3300013100 Bacteria 7663
68 Ga0157373_10038187 3300013100 Bacteria 3442
69 Ga0157373_10167623 3300013100 Bacteria 1546
70 Ga0157371_10003507 3300013102 Bacteria 14179
71 Ga0157371_10005242 3300013102 Bacteria 11009
72 Ga0157371_10007319 3300013102 Bacteria 8960
73 Ga0157371_10038471 3300013102 Bacteria 3422
74 Ga0157371_10087644 3300013102 Bacteria 2204
75 Ga0157370_10090040 3300013104 Bacteria 2881
76 Ga0157370_10128108 3300013104 Bacteria 2369
77 Ga0157370_10277882 3300013104 Bacteria 1547
78 Ga0157370_10441623 3300013104 Bacteria 1196
79 Ga0157369_10000696 3300013105 Bacteria 43381
80 Ga0157369_10060682 3300013105 Bacteria 4078
81 Ga0157369_10062925 3300013105 Bacteria 3998
82 Ga0157369_10075814 3300013105 Bacteria 3605
83 Ga0157369_10464992 3300013105 Bacteria 1309
84 Ga0157374_10047506 3300013296 Bacteria 3980
85 Ga0157372_10000037 3300013307 Bacteria 172444
86 Ga0157372_10006531 3300013307 Bacteria 12413
87 Ga0157372_10025857 3300013307 Bacteria 6384
88 Ga0157372_10071429 3300013307 Bacteria 3909
89 Ga0157380_10022312 3300014326 Bacteria 4763
90 Ga0157380_10046413 3300014326 Bacteria 3412
91 Ga0206351_10323266 3300020077 Bacteria 2634
92 Ga0209437_100130 3300025233 Bacteria 183731
93 Ga0209129_1003376 3300025258 Bacteria 7015
94 Ga0209455_1002072 3300025272 Bacteria 8092
95 Ga0209676_1000559 3300025292 Bacteria 56240
96 Ga0209257_1000006 3300025304 Bacteria 1570111
97 Ga0209257_1016284 3300025304 Bacteria 3017
98 Ga0207647_10000491 3300025904 Bacteria 31654
99 Ga0207647_10015404 3300025904 Bacteria 5242
100 Ga0207654_10031016 3300025911 Bacteria 2940
101 Ga0207654_10097039 3300025911 Bacteria 1809
102 Ga0207695_10000183 3300025913 Bacteria 181350
103 Ga0207695_10054135 3300025913 Bacteria 4193
104 Ga0207695_10055760 3300025913 Bacteria 4116
105 Ga0207671_10000466 3300025914 Bacteria 55435
106 Ga0207671_10002139 3300025914 Bacteria 21569
107 Ga0207671_10043409 3300025914 Bacteria 3325
108 Ga0207657_10001998 3300025919 Bacteria 22052
109 Ga0207657_10030999 3300025919 Bacteria 4847
110 Ga0207657_10110170 3300025919 Bacteria 2274
111 Ga0207652_10009405 3300025921 Bacteria 7858
112 Ga0207652_10244936 3300025921 Bacteria 1616
113 Ga0207652_10319445 3300025921 Unclassified 1402
114 Ga0207644_10009172 3300025931 Bacteria 6488
115 Ga0207706_10000007 3300025933 Bacteria 211081
116 Ga0207667_10000070 3300025949 Bacteria 180479
117 Ga0207667_10014292 3300025949 Bacteria 9054
118 Ga0207639_10029636 3300026041 Bacteria 4009
119 Ga0207678_10048409 3300026067 Bacteria 3674
120 Ga0207641_10079540 3300026088 Bacteria 2842
121 Ga0207674_10078328 3300026116 Bacteria 3310
122 Ga0207698_10016404 3300026142 Bacteria 4991
123 Ga0307515_10001632 3300028794 Bacteria 49830
124 Ga0307515_10017262 3300028794 Bacteria 13157
125 Ga0307515_10037889 3300028794 Bacteria 7733
126 Ga0307515_10162236 3300028794 Bacteria 2273
127 Ga0307515_10176898 3300028794 Bacteria 2101
128 Ga0316181_1136355 3300030744 Bacteria 3654
129 Ga0265327_10058345 3300031251 Bacteria 1981
130 Ga0307513_10148095 3300031456 Bacteria 2262
131 Ga0307513_10251669 3300031456 Bacteria 1563
132 Ga0307509_10040572 3300031507 Bacteria 5062
133 Ga0307509_10074373 3300031507 Bacteria 3534
134 Ga0307408_100000185 3300031548 Bacteria 68911
135 Ga0307408_100180799 3300031548 Unclassified 1691
136 Ga0307405_10012681 3300031731 Unclassified 4473
137 Ga0307405_10019971 3300031731 Bacteria 3733
138 Ga0307407_10024023 3300031903 Unclassified 3189
139 Ga0307412_10074742 3300031911 Bacteria 2323
140 Ga0307416_100000706 3300032002 Bacteria 17346
141 Ga0307414_10000153 3300032004 Bacteria 46402
142 Ga0307414_10001825 3300032004 Bacteria 11002
143 Ga0307414_10011740 3300032004 Bacteria 5152
144 Ga0307414_10134243 3300032004 Bacteria 1927
145 Ga0307414_10316764 3300032004 Bacteria 1326
146 Ga0307411_10002049 3300032005 Bacteria 8652
147 Ga0307415_100041534 3300032126 Unclassified 3054
148 Ga0307507_10000143 3300033179 Bacteria 124248
149 Ga0373927_0031489 3300035695 Bacteria 3457
150 Ga0395899_0000017 3300037312 Bacteria 440179
151 Ga0395899_0000152 3300037312 Bacteria 105233
152 Ga0395905_0029460 3300037471 Bacteria 5172
153 Ga0439448_0004439 3300042005 Bacteria 3959
154 Ga0439455_0003155 3300042012 Bacteria 3111
155 Ga0439457_012330 3300042014 Bacteria 1927
156 Ga0451577_0003267 3300042876 Bacteria 18246
157 Ga0466969_0051504 3300044656 Bacteria 2026
158 Ga0466966_0012711 3300044684 Bacteria 5579
159 Ga0466961_0037219 3300044693 Bacteria 3122
160 Ga0453684_0001084 3300044712 Bacteria 86663
161 Ga0453684_0002883 3300044712 Bacteria 40338
162 Ga0466959_0076867 3300045049 Bacteria 2410
163 Ga0451576_0027445 3300045051 Bacteria 6114
164 Ga0451576_0210979 3300045051 Bacteria 2028
165 Ga0451576_0338004 3300045051 Bacteria 1576
166 Ga0466958_0027483 3300045836 Bacteria 3368
167 Ga0495638_0000026 3300046460 Bacteria 347061
168 Ga0495585_0000089 3300046492 Bacteria 96296
169 Ga0495654_0041683 3300046530 Bacteria 2282
170 Ga0495609_0005487 3300046538 Bacteria 6641
171 Ga0495597_0087260 3300046542 Unclassified 1328
172 Ga0495668_0000011 3300046616 Bacteria 472186
173 Ga0495668_0000321 3300046616 Bacteria 65700
174 Ga0495625_0001789 3300046660 Bacteria 24694
175 Ga0495625_0068523 3300046660 Bacteria 2494
176 Ga0495625_0197926 3300046660 Bacteria 1328
177 Ga0496116_0022463 3300048919 Bacteria 4726
178 Ga0495682_0018392 3300049460 Bacteria 2632
179 Ga0501298_001619 3300049521 Bacteria 3341
180 Ga0501070_0091121 3300049586 Bacteria 2523
181 Ga0501202_006386 3300049652 Bacteria 2107
182 Ga0501222_001333 3300049662 Bacteria 3461
183 Ga0501223_001336 3300049663 Bacteria 5708
184 Ga0501224_002583 3300049664 Bacteria 2482
185 Ga0501236_002770 3300049670 Bacteria 2020
186 Ga0501243_001456 3300049675 Bacteria 3393
187 Ga0501257_000620 3300049686 Bacteria 7040
188 Ga0501257_006842 3300049686 Bacteria 2538
189 Ga0501259_001166 3300049688 Bacteria 4372
190 Ga0501259_018169 3300049688 Unclassified 1226
191 Ga0501261_001924 3300049690 Bacteria 2557
192 Ga0501225_0004588 3300049705 Bacteria 4108
193 Ga0501241_001252 3300049758 Bacteria 5274
194 Ga0501264_000143 3300049761 Bacteria 11303
195 nmdc:mga0k408_259_c1 3300050493 Bacteria 28866
196 nmdc:mga07m45_5580_c1 3300050496 Bacteria 6280
197 Ga0500635_0001378 3300053080 Bacteria 5831
198 Ga0500562_007485 3300053108 Bacteria 2753
199 Ga0500618_000011 3300053125 Bacteria 198091
200 Ga0500642_0034857 3300053130 Bacteria 2133
201 Ga0500604_0023598 3300053151 Bacteria 1755
202 Ga0500616_0000004 3300053153 Bacteria 1002714
203 Ga0500616_0005057 3300053153 Bacteria 9116
204 Ga0500622_0000014 3300053156 Bacteria 368189
205 Ga0500622_0000020 3300053156 Bacteria 271239
206 Ga0500622_0001513 3300053156 Bacteria 18450

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2721755487 2722731243 333
2 3300049688 Ga0501259_018169 Ga0501259_018169_87_1136 335
3 3300009093 Ga0105240_10001738 Ga0105240_1000173816 340
4 3300009174 Ga0105241_10063488 Ga0105241_100634882 340
5 3300009545 Ga0105237_10000143 Ga0105237_1000014322 340
6 3300010375 Ga0105239_10011768 Ga0105239_100117687 340
7 3300025911 Ga0207654_10031016 Ga0207654_100310165 340
8 3300025913 Ga0207695_10000183 Ga0207695_10000183100 340
9 3300025914 Ga0207671_10002139 Ga0207671_1000213916 340
10 3300003320 rootH2_10113780 rootH2_101137801 341
11 3300031507 Ga0307509_10074373 Ga0307509_100743732 341
12 3300046542 Ga0495597_0087260 Ga0495597_0087260_147_1250 346
13 iso_pu_bacteria 2898713307 2898714559 350
14 iso_pu_bacteria 2890737413 2890739228 351
15 iso_pu_bacteria 2904780799 2904782319 351
16 iso_pu_bacteria 2914759650 2914763321 351
17 iso_pu_bacteria 2919177583 2919178484 351
18 iso_pu_bacteria 2932082852 2932085379 351
19 iso_pu_bacteria 2977232053 2977234210 351
20 iso_pu_bacteria 8055588893 8055591448 351
21 iso_pu_bacteria 2522125168 2522550217 352
22 iso_pu_bacteria 2884634485 2884636267 352
23 iso_pu_bacteria 2911138879 2911140433 352
24 iso_pu_bacteria 2919692658 2919696078 352
25 3300005563 Ga0068855_100434812 Ga0068855_1004348122 353
26 3300026088 Ga0207641_10079540 Ga0207641_100795403 353
27 3300032005 Ga0307411_10002049 Ga0307411_100020496 353
28 3300035695 Ga0373927_0031489 Ga0373927_0031489_620_1789 353
29 3300042014 Ga0439457_012330 Ga0439457_012330_723_1814 353
30 3300003320 rootH2_10001238 rootH2_1000123823 354
31 3300003322 rootL2_10010945 rootL2_100109451 354
32 3300003322 rootL2_10019883 rootL2_100198837 354
33 3300003322 rootL2_10075085 rootL2_100750853 354
34 3300003322 rootL2_10208314 rootL2_102083141 354
35 3300003323 rootH1_10004025 rootH1_1000402516 354
36 3300003323 rootH1_10059311 rootH1_100593112 354
37 3300003794 Ga0055531_10001456 Ga0055531_1000145612 354
38 3300005262 Ga0065165_1000703 Ga0065165_100070321 354
39 3300005289 Ga0065704_10073385 Ga0065704_100733858 354
40 3300005618 Ga0068864_100357162 Ga0068864_1003571621 354
41 3300009093 Ga0105240_10288762 Ga0105240_102887622 354
42 3300013102 Ga0157371_10087644 Ga0157371_100876442 354
43 3300013104 Ga0157370_10090040 Ga0157370_100900402 354
44 3300014326 Ga0157380_10046413 Ga0157380_100464133 354
45 3300025304 Ga0209257_1000006 Ga0209257_1000006440 354
46 3300025304 Ga0209257_1016284 Ga0209257_10162843 354
47 3300028794 Ga0307515_10001632 Ga0307515_1000163234 354
48 3300028794 Ga0307515_10037889 Ga0307515_100378892 354
49 3300028794 Ga0307515_10162236 Ga0307515_101622362 354
50 3300031251 Ga0265327_10058345 Ga0265327_100583452 354
51 3300031456 Ga0307513_10148095 Ga0307513_101480952 354
52 3300031456 Ga0307513_10251669 Ga0307513_102516692 354
53 3300031548 Ga0307408_100000185 Ga0307408_1000001857 354
54 3300031548 Ga0307408_100180799 Ga0307408_1001807991 354
55 3300031731 Ga0307405_10012681 Ga0307405_100126813 354
56 3300031903 Ga0307407_10024023 Ga0307407_100240231 354
57 3300031911 Ga0307412_10074742 Ga0307412_100747422 354
58 3300032002 Ga0307416_100000706 Ga0307416_10000070611 354
59 3300032004 Ga0307414_10000153 Ga0307414_1000015332 354
60 3300032126 Ga0307415_100041534 Ga0307415_1000415342 354
61 3300037471 Ga0395905_0029460 Ga0395905_0029460_3462_4565 354
62 3300042876 Ga0451577_0003267 Ga0451577_0003267_13989_15089 354
63 3300044712 Ga0453684_0001084 Ga0453684_0001084_14010_15110 354
64 3300044712 Ga0453684_0002883 Ga0453684_0002883_35217_36320 354
65 3300045051 Ga0451576_0027445 Ga0451576_0027445_2815_3918 354
66 3300045051 Ga0451576_0210979 Ga0451576_0210979_350_1450 354
67 3300045051 Ga0451576_0338004 Ga0451576_0338004_333_1436 354
68 3300046460 Ga0495638_0000026 Ga0495638_0000026_23087_24193 354
69 3300046660 Ga0495625_0197926 Ga0495625_0197926_25_1131 354
70 3300049670 Ga0501236_002770 Ga0501236_002770_439_1539 354
71 3300049686 Ga0501257_000620 Ga0501257_000620_4850_5956 354
72 3300049686 Ga0501257_006842 Ga0501257_006842_26_1126 354
73 3300049758 Ga0501241_001252 Ga0501241_001252_2020_3117 354
74 3300049761 Ga0501264_000143 Ga0501264_000143_10010_11110 354
75 3300053108 Ga0500562_007485 Ga0500562_007485_1334_2434 354
76 3300053151 Ga0500604_0023598 Ga0500604_0023598_436_1536 354
77 3300053153 Ga0500616_0000004 Ga0500616_0000004_203758_204864 354
78 3300053153 Ga0500616_0005057 Ga0500616_0005057_1397_2494 354
79 3300053156 Ga0500622_0000014 Ga0500622_0000014_47281_48381 354
80 3300053156 Ga0500622_0000020 Ga0500622_0000020_48833_49933 354
81 3300001979 JGI24740J21852_10012335 JGI24740J21852_100123352 355
82 3300001990 JGI24737J22298_10000210 JGI24737J22298_1000021018 355
83 3300002067 JGI24735J21928_10000011 JGI24735J21928_10000011130 355
84 3300002737 JGI25162J39368_1000055 JGI25162J39368_10000558 355
85 3300003320 rootH2_10190577 rootH2_101905772 355
86 3300003781 Ga0055536_1019099 Ga0055536_10190992 355
87 3300005262 Ga0065165_1000324 Ga0065165_10003246 355
88 3300005289 Ga0065704_10084678 Ga0065704_100846783 355
89 3300005327 Ga0070658_10114135 Ga0070658_101141351 355
90 3300005331 Ga0070670_100038996 Ga0070670_1000389963 355
91 3300005336 Ga0070680_100240662 Ga0070680_1002406622 355
92 3300005337 Ga0070682_100064221 Ga0070682_1000642212 355
93 3300005339 Ga0070660_100001218 Ga0070660_1000012188 355
94 3300005339 Ga0070660_100215330 Ga0070660_1002153301 355
95 3300005354 Ga0070675_100011307 Ga0070675_1000113072 355
96 3300005355 Ga0070671_100005411 Ga0070671_1000054117 355
97 3300005356 Ga0070674_100059258 Ga0070674_1000592582 355
98 3300005366 Ga0070659_100001600 Ga0070659_1000016006 355
99 3300005366 Ga0070659_100029209 Ga0070659_1000292093 355
100 3300005457 Ga0070662_100000050 Ga0070662_10000005014 355
101 3300005458 Ga0070681_10122356 Ga0070681_101223562 355
102 3300005458 Ga0070681_10381267 Ga0070681_103812671 355
103 3300005530 Ga0070679_100006928 Ga0070679_10000692810 355
104 3300005530 Ga0070679_100359881 Ga0070679_1003598811 355
105 3300005535 Ga0070684_100227996 Ga0070684_1002279962 355
106 3300005548 Ga0070665_100296355 Ga0070665_1002963552 355
107 3300005563 Ga0068855_100000156 Ga0068855_10000015610 355
108 3300005563 Ga0068855_100106155 Ga0068855_1001061552 355
109 3300005563 Ga0068855_100200819 Ga0068855_1002008192 355
110 3300005577 Ga0068857_100136155 Ga0068857_1001361552 355
111 3300005614 Ga0068856_100063375 Ga0068856_1000633753 355
112 3300005616 Ga0068852_100053074 Ga0068852_1000530744 355
113 3300006195 Ga0075366_10000381 Ga0075366_100003813 355
114 3300006881 Ga0068865_100094682 Ga0068865_1000946822 355
115 3300009093 Ga0105240_10008050 Ga0105240_1000805013 355
116 3300009093 Ga0105240_10013581 Ga0105240_100135814 355
117 3300009093 Ga0105240_10042937 Ga0105240_100429376 355
118 3300009148 Ga0105243_10000046 Ga0105243_1000004666 355
119 3300009174 Ga0105241_10018847 Ga0105241_100188471 355
120 3300009174 Ga0105241_10057948 Ga0105241_100579483 355
121 3300009545 Ga0105237_10000753 Ga0105237_1000075344 355
122 3300009545 Ga0105237_10025036 Ga0105237_100250362 355
123 3300009545 Ga0105237_10027555 Ga0105237_100275554 355
124 3300010375 Ga0105239_10000069 Ga0105239_1000006932 355
125 3300010375 Ga0105239_10004713 Ga0105239_1000471317 355
126 3300010375 Ga0105239_10009481 Ga0105239_100094817 355
127 3300010375 Ga0105239_10102369 Ga0105239_101023692 355
128 3300010375 Ga0105239_10662176 Ga0105239_106621762 355
129 3300013100 Ga0157373_10008407 Ga0157373_100084079 355
130 3300013100 Ga0157373_10038187 Ga0157373_100381873 355
131 3300013100 Ga0157373_10167623 Ga0157373_101676232 355
132 3300013102 Ga0157371_10003507 Ga0157371_1000350714 355
133 3300013102 Ga0157371_10005242 Ga0157371_100052423 355
134 3300013102 Ga0157371_10007319 Ga0157371_100073193 355
135 3300013102 Ga0157371_10038471 Ga0157371_100384713 355
136 3300013104 Ga0157370_10128108 Ga0157370_101281082 355
137 3300013104 Ga0157370_10277882 Ga0157370_102778821 355
138 3300013104 Ga0157370_10441623 Ga0157370_104416231 355
139 3300013105 Ga0157369_10000696 Ga0157369_1000069617 355
140 3300013105 Ga0157369_10060682 Ga0157369_100606822 355
141 3300013105 Ga0157369_10062925 Ga0157369_100629255 355
142 3300013105 Ga0157369_10075814 Ga0157369_100758142 355
143 3300013105 Ga0157369_10464992 Ga0157369_104649921 355
144 3300013296 Ga0157374_10047506 Ga0157374_100475061 355
145 3300013307 Ga0157372_10000037 Ga0157372_1000003742 355
146 3300013307 Ga0157372_10006531 Ga0157372_100065316 355
147 3300013307 Ga0157372_10025857 Ga0157372_100258576 355
148 3300013307 Ga0157372_10071429 Ga0157372_100714294 355
149 3300014326 Ga0157380_10022312 Ga0157380_100223124 355
150 3300020077 Ga0206351_10323266 Ga0206351_103232662 355
151 3300025233 Ga0209437_100130 Ga0209437_10013043 355
152 3300025258 Ga0209129_1003376 Ga0209129_10033768 355
153 3300025272 Ga0209455_1002072 Ga0209455_10020726 355
154 3300025292 Ga0209676_1000559 Ga0209676_100055917 355
155 3300025904 Ga0207647_10000491 Ga0207647_1000049123 355
156 3300025904 Ga0207647_10015404 Ga0207647_100154046 355
157 3300025911 Ga0207654_10097039 Ga0207654_100970391 355
158 3300025913 Ga0207695_10054135 Ga0207695_100541352 355
159 3300025913 Ga0207695_10055760 Ga0207695_100557604 355
160 3300025914 Ga0207671_10000466 Ga0207671_1000046649 355
161 3300025914 Ga0207671_10043409 Ga0207671_100434092 355
162 3300025919 Ga0207657_10001998 Ga0207657_100019985 355
163 3300025919 Ga0207657_10030999 Ga0207657_100309995 355
164 3300025919 Ga0207657_10110170 Ga0207657_101101702 355
165 3300025921 Ga0207652_10009405 Ga0207652_100094053 355
166 3300025921 Ga0207652_10244936 Ga0207652_102449362 355
167 3300025921 Ga0207652_10319445 Ga0207652_103194451 355
168 3300025931 Ga0207644_10009172 Ga0207644_100091724 355
169 3300025933 Ga0207706_10000007 Ga0207706_10000007138 355
170 3300025949 Ga0207667_10000070 Ga0207667_100000709 355
171 3300025949 Ga0207667_10014292 Ga0207667_100142922 355
172 3300026041 Ga0207639_10029636 Ga0207639_100296363 355
173 3300026067 Ga0207678_10048409 Ga0207678_100484092 355
174 3300026116 Ga0207674_10078328 Ga0207674_100783281 355
175 3300026142 Ga0207698_10016404 Ga0207698_100164042 355
176 3300028794 Ga0307515_10017262 Ga0307515_1001726213 355
177 3300028794 Ga0307515_10176898 Ga0307515_101768981 355
178 3300030744 Ga0316181_1136355 Ga0316181_11363553 355
179 3300031507 Ga0307509_10040572 Ga0307509_100405725 355
180 3300031731 Ga0307405_10019971 Ga0307405_100199712 355
181 3300032004 Ga0307414_10001825 Ga0307414_100018258 355
182 3300032004 Ga0307414_10011740 Ga0307414_100117407 355
183 3300032004 Ga0307414_10134243 Ga0307414_101342431 355
184 3300032004 Ga0307414_10316764 Ga0307414_103167641 355
185 3300033179 Ga0307507_10000143 Ga0307507_1000014348 355
186 3300037312 Ga0395899_0000017 Ga0395899_0000017_103108_104205 355
187 3300037312 Ga0395899_0000152 Ga0395899_0000152_24773_25870 355
188 3300042005 Ga0439448_0004439 Ga0439448_0004439_2096_3193 355
189 3300042012 Ga0439455_0003155 Ga0439455_0003155_1058_2155 355
190 3300044656 Ga0466969_0051504 Ga0466969_0051504_619_1716 355
191 3300044684 Ga0466966_0012711 Ga0466966_0012711_2924_4021 355
192 3300044693 Ga0466961_0037219 Ga0466961_0037219_445_1542 355
193 3300045049 Ga0466959_0076867 Ga0466959_0076867_945_2042 355
194 3300045836 Ga0466958_0027483 Ga0466958_0027483_1468_2565 355
195 3300046492 Ga0495585_0000089 Ga0495585_0000089_47942_49039 355
196 3300046530 Ga0495654_0041683 Ga0495654_0041683_1150_2247 355
197 3300046538 Ga0495609_0005487 Ga0495609_0005487_1357_2454 355
198 3300046616 Ga0495668_0000011 Ga0495668_0000011_439323_440420 355
199 3300046616 Ga0495668_0000321 Ga0495668_0000321_4229_5329 355
200 3300046660 Ga0495625_0001789 Ga0495625_0001789_92_1189 355
201 3300046660 Ga0495625_0068523 Ga0495625_0068523_294_1391 355
202 3300048919 Ga0496116_0022463 Ga0496116_0022463_2369_3469 355
203 3300049460 Ga0495682_0018392 Ga0495682_0018392_168_1265 355
204 3300049521 Ga0501298_001619 Ga0501298_001619_719_1816 355
205 3300049586 Ga0501070_0091121 Ga0501070_0091121_899_1996 355
206 3300049652 Ga0501202_006386 Ga0501202_006386_695_1792 355
207 3300049662 Ga0501222_001333 Ga0501222_001333_1670_2767 355
208 3300049663 Ga0501223_001336 Ga0501223_001336_3305_4402 355
209 3300049664 Ga0501224_002583 Ga0501224_002583_488_1585 355
210 3300049675 Ga0501243_001456 Ga0501243_001456_1419_2516 355
211 3300049688 Ga0501259_001166 Ga0501259_001166_1105_2202 355
212 3300049690 Ga0501261_001924 Ga0501261_001924_1242_2339 355
213 3300049705 Ga0501225_0004588 Ga0501225_0004588_1857_2954 355
214 3300050493 nmdc:mga0k408_259_c1 nmdc:mga0k408_259_c1_2030_3127 355
215 3300050496 nmdc:mga07m45_5580_c1 nmdc:mga07m45_5580_c1_1315_2412 355
216 3300053080 Ga0500635_0001378 Ga0500635_0001378_1711_2808 355
217 3300053125 Ga0500618_000011 Ga0500618_000011_172822_173919 355
218 3300053130 Ga0500642_0034857 Ga0500642_0034857_18_1115 355
219 3300053156 Ga0500622_0001513 Ga0500622_0001513_1205_2302 355

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01784

DUF34_NIF3

Duf34/NIF3 (NGG1p interacting factor 3)

39

385

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
2fyw-assembly1.cif.gz_A crystal structure of a conserved protein of unknown function from streptococcus pneumoniae 0.8846 1 354
2fyw-assembly1.cif.gz_A crystal structure of a conserved protein of unknown function from streptococcus pneumoniae 0.8751 1 354
1nmo-assembly1.cif.gz_A structural genomics, protein ybgi, unknown function 0.8661 1 351
1nmo-assembly1.cif.gz_A structural genomics, protein ybgi, unknown function 0.8628 1 351
2gx8-assembly1.cif.gz_C-2 the crystal structure of bacillus cereus protein related to nif3 0.862 1 354
ID Description Score Start End Superfamily
af_Q54BW8_1_102_3.30.70.120 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9701 133 223 3.30.70.120
af_P9WFM1_132_234_3.30.70.120 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9571 131 222 3.30.70.120
af_Q55E83_2_130_3.40.1390.30 Alpha Beta;3-Layer(aba) Sandwich;Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase; Chain: A, domain 1;NIF3 (NGG1p interacting factor 3)-like 0.9341 1 118 3.40.1390.30
af_Q4V7D6_21_147_3.40.1390.30 Alpha Beta;3-Layer(aba) Sandwich;Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase; Chain: A, domain 1;NIF3 (NGG1p interacting factor 3)-like 0.9339 1 117 3.40.1390.30
af_Q2FY14_1_121_3.40.1390.30 Alpha Beta;3-Layer(aba) Sandwich;Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase; Chain: A, domain 1;NIF3 (NGG1p interacting factor 3)-like 0.9333 1 121 3.40.1390.30
ID Description Score Start End GO Terms
AF-A0A4Q6E7J7-F1-model_v4 Nif3-like dinuclear metal center hexameric protein 0.9848 1 115 GO:0005737
AF-A0A2A4LVD4-F1-model_v4 deleted 0.984 16 354
AF-A0A357Z767-F1-model_v4 Nif3-like dinuclear metal center hexameric protein 0.9837 1 120 GO:0005737
AF-A0A090W5V0-F1-model_v4 GTP cyclohydrolase 1 type 2 homolog 0.9828 231 354 GO:0005737
AF-A0A7W1VYU8-F1-model_v4 Nif3-like dinuclear metal center hexameric protein 0.981 1 354 GO:0005737

Feature Viewer

pLDDT pTM Quality
93.19 0.85 High
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Predicted Structure (AlphaFold2)

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