F330567

General Info

Members Datasets Scaffolds Average Seq Length
218 164 188 526

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2995726249|2995727407
Length 561
Sequence TAGMPLRDYRVHRYVNAFCPACHEEQPDRPLAEVQRLSGWLADRDGRIWLERGCRVHGLQRTLYDESAEILSYLEQWTAPTKIHTADLAGNFKPVPEAYEDGLPEMQTQHTCILLEDITDHCNLKCPTCFAESSPAASSVAPLEEVLASVDARLARENGRIDVLMLSGGEPTLYPWLEQLLEHLVARPVVRILINSNGLRIANDDAFVETLARHRERVEIYLQYDGEEPESSRYHRGADIRRFKERALARLSEAGIFTTLTMTAALGVNDHEIGAVIRRAMATPYVGGVTIQPVFGSGRSAGIDAQDRLTHTGVLARMGPQTDGEVTWRDLTALPCSHPHCCSVGYLLRDDSDRWKSLTELVGHEQLKEFLDLNPDLIANRIADSEINQAMKRSVSQTLQQSVKQSLLDLLSEQSSLSHPSIGSLWKDICAGCDLGIGTLSKLAAAALPGQHGRLRRFLGERVKRITVKPFMDINTMIEERLTQCCVHVATVNEAPAADGSAVHQCAPFCAVQAWAPLSRRRLSTATGAPGGGAADAPPAPAAAAAGAPDPGRLIPVRAKR

Samples

Sample ID Description Type Environment
1 2643221546 Microbacterium sp. Root53 Isolate Unclassified
2 2643221619 Agromyces sp. Root81 Isolate Unclassified
3 2643221687 Mycobacterium sp. Root135 Isolate Unclassified
4 2643221692 Nocardia sp. Root136 Isolate Unclassified
5 2738541264 Mycobacterium sp. OK889 Isolate Unclassified
6 2738541274 Mycobacterium sp. YR708 Isolate Unclassified
7 2738541356 Mycobacterium sp. OK887 Isolate Unclassified
8 2738543028 Mycobacterium sp. YR782 Isolate Unclassified
9 2744054611 Aldersonia kunmingensis DSM 45001 Isolate Rhizosphere
10 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
11 2775506735 Arthrobacter sp. S95 1704 Isolate Unclassified
12 2808606357 Arthrobacter sp. SLBN-122 Isolate Unclassified
13 2808606360 Arthrobacter sp. SLBN-112 Isolate Unclassified
14 2811994871 Arthrobacter sp. SLBN-179 Isolate Unclassified
15 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
16 2842134933 Mycolicibacterium obuense SEMIA 442 Isolate Nodule
17 2857740372 Paenarthrobacter sp. R-74611 Isolate Unclassified
18 2902799365 Mycolicibacterium sp. P1-5 Isolate Unclassified
19 2919051321 Sinomonas atrocyanea 1003 Isolate Rhizosphere
20 2929212328 Mycolicibacterium sp. R-73050 Hybrid assembly Isolate Unclassified
21 2939598168 Arthrobacter sp. 754 Isolate Rhizosphere
22 2945916053 Arthrobacter ulcerisalmonis W1I2 Isolate Rhizosphere
23 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
24 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
25 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
26 2953998280 Pseudarthrobacter sp. W1I19 Isolate Rhizosphere
27 2995726249 Leucobacter zeae CC-MF41 Isolate Rhizosphere
28 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
29 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
30 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
31 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
32 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
33 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
34 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
35 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
36 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
37 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
38 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
39 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
40 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
41 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
42 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
43 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
44 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
45 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
46 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
47 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
48 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
49 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
53 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
57 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
58 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
59 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
60 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
61 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
62 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
63 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
77 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
78 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
79 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
80 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
81 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
82 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
83 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
84 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
85 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
86 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
87 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
88 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
89 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
90 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
91 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
92 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
93 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
94 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
95 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
96 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
97 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
98 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
99 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
100 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
101 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
102 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
103 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
104 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
105 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
106 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
107 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
108 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
109 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
110 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
111 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
112 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
113 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
114 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
115 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
116 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
117 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
118 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
119 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
120 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
121 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
122 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
123 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
124 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
125 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
126 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
127 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
128 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
129 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
130 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
131 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
132 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
133 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
134 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
135 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
136 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
137 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
138 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
139 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
140 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
141 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
148 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
149 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
150 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
151 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
152 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
153 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
154 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
155 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
156 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
157 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
158 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
159 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
160 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
161 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
162 8004212874 Microbacterium sp. NC79 Isolate Rhizosphere
163 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
164 8054107350 Arthrobacter rhizosphaerae CCNWLXL 1-35 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.32
Metatranscriptomes 0.92
Isolates 13.76

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.88
Nodule 0.46
Rhizoplane 7.34
Rhizosphere 66.97
Stem 0
Stem Tuber 0
Unclassified 18.35

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0006562J51391_1013222 3300003578 Bacteria 3631
2 Ga0006562J51391_1111915 3300003578 Bacteria 26433
3 Ga0055540_1000143 3300003792 Bacteria 71425
4 Ga0070658_10023445 3300005327 Bacteria 4953
5 Ga0070692_10016796 3300005345 Bacteria 3487
6 Ga0070688_100028498 3300005365 Bacteria 3334
7 Ga0070659_100071846 3300005366 Bacteria 2753
8 Ga0070667_100001204 3300005367 Bacteria 23534
9 Ga0070709_10000052 3300005434 Bacteria 90029
10 Ga0070701_10021864 3300005438 Bacteria 3060
11 Ga0070685_10007259 3300005466 Bacteria 5666
12 Ga0070684_100146595 3300005535 Bacteria 2137
13 Ga0070665_100000653 3300005548 Bacteria 46746
14 Ga0070664_100226168 3300005564 Bacteria 1675
15 Ga0068852_100076771 3300005616 Bacteria 2950
16 Ga0068870_10048852 3300005840 Bacteria 2229
17 Ga0075365_10004457 3300006038 Bacteria 7424
18 Ga0075365_10020185 3300006038 Bacteria 4126
19 Ga0075363_100061958 3300006048 Bacteria 2017
20 Ga0075369_10012073 3300006186 Bacteria 3408
21 Ga0075369_10021363 3300006186 Bacteria 2660
22 Ga0075428_100000577 3300006844 Bacteria 37464
23 Ga0075430_100000816 3300006846 Bacteria 24281
24 Ga0075430_100011884 3300006846 Bacteria 7411
25 Ga0075430_100044987 3300006846 Bacteria 3731
26 Ga0075431_100006463 3300006847 Bacteria 11640
27 Ga0075431_100058973 3300006847 Bacteria 3961
28 Ga0075429_100000494 3300006880 Bacteria 29616
29 Ga0075429_100015613 3300006880 Bacteria 6580
30 Ga0105245_10049835 3300009098 Bacteria 3752
31 Ga0105245_10076793 3300009098 Bacteria 3044
32 Ga0114129_10000004 3300009147 Bacteria 160944
33 Ga0114129_10000082 3300009147 Bacteria 88174
34 Ga0114129_10028839 3300009147 Bacteria 7863
35 Ga0114129_10199914 3300009147 Bacteria 2708
36 Ga0105243_10015763 3300009148 Bacteria 5716
37 Ga0105243_10028674 3300009148 Bacteria 4275
38 Ga0105237_10033122 3300009545 Bacteria 5235
39 Ga0105249_10045377 3300009553 Bacteria 3997
40 Ga0105239_10042908 3300010375 Bacteria 4956
41 Ga0157369_10062652 3300013105 Bacteria 4007
42 Ga0171462_1001 3300013250 Bacteria 1135406
43 Ga0163162_10206787 3300013306 Bacteria 2092
44 Ga0157372_10117123 3300013307 Bacteria 3055
45 Ga0157380_10099230 3300014326 Bacteria 2421
46 Ga0157377_10029624 3300014745 Bacteria 2957
47 Ga0209673_1024270 3300025273 Bacteria 2041
48 Ga0209051_1000328 3300025303 Bacteria 71477
49 Ga0209051_1019457 3300025303 Bacteria 2960
50 Ga0207688_10015791 3300025901 Bacteria 4096
51 Ga0207699_10000060 3300025906 Bacteria 90017
52 Ga0207643_10002086 3300025908 Bacteria 11008
53 Ga0207671_10061431 3300025914 Bacteria 2788
54 Ga0207687_10051714 3300025927 Bacteria 2865
55 Ga0207687_10143395 3300025927 Bacteria 1815
56 Ga0207706_10010498 3300025933 Bacteria 8463
57 Ga0207709_10026023 3300025935 Bacteria 3356
58 Ga0207709_10074433 3300025935 Bacteria 2167
59 Ga0207658_10003075 3300025986 Bacteria 11935
60 Ga0207708_10001369 3300026075 Bacteria 18331
61 Ga0207648_10006381 3300026089 Bacteria 11722
62 Ga0207675_100016535 3300026118 Bacteria 6889
63 Ga0268266_10000659 3300028379 Bacteria 46737
64 Ga0265327_10000888 3300031251 Bacteria 44137
65 Ga0307408_100015777 3300031548 Bacteria 5034
66 Ga0316576_10124256 3300031727 Bacteria 1939
67 Ga0307405_10008812 3300031731 Bacteria 5138
68 Ga0307405_10020402 3300031731 Bacteria 3702
69 Ga0307405_10024996 3300031731 Bacteria 3422
70 Ga0307413_10022577 3300031824 Bacteria 3394
71 Ga0307410_10005625 3300031852 Bacteria 6661
72 Ga0307410_10009175 3300031852 Bacteria 5534
73 Ga0307410_10013702 3300031852 Bacteria 4741
74 Ga0307410_10015485 3300031852 Bacteria 4525
75 Ga0307410_10120863 3300031852 Bacteria 1910
76 Ga0307407_10001071 3300031903 Bacteria 9496
77 Ga0307407_10030420 3300031903 Bacteria 2912
78 Ga0307407_10058570 3300031903 Bacteria 2240
79 Ga0307412_10005504 3300031911 Bacteria 7113
80 Ga0307412_10012674 3300031911 Bacteria 4920
81 Ga0307409_100000650 3300031995 Bacteria 15377
82 Ga0307409_100009126 3300031995 Bacteria 6074
83 Ga0307416_100001593 3300032002 Bacteria 12462
84 Ga0307416_100012243 3300032002 Bacteria 5766
85 Ga0307416_100071118 3300032002 Bacteria 2888
86 Ga0307414_10031097 3300032004 Bacteria 3497
87 Ga0307411_10036805 3300032005 Bacteria 3071
88 Ga0307415_100000175 3300032126 Bacteria 28673
89 Ga0307415_100017153 3300032126 Bacteria 4335
90 Ga0307415_100020600 3300032126 Bacteria 4030
91 Ga0307415_100033413 3300032126 Bacteria 3339
92 Ga0373936_0002879 3300035113 Bacteria 6420
93 Ga0373955_0020242 3300035172 Bacteria 3342
94 Ga0373961_0000873 3300035241 Bacteria 10153
95 Ga0373935_0050567 3300035692 Bacteria 2638
96 Ga0373937_0068982 3300036401 Bacteria 3259
97 Ga0373925_0083513 3300037068 Bacteria 2433
98 Ga0395899_0031241 3300037312 Bacteria 4003
99 Ga0395900_0004303 3300037418 Bacteria 15097
100 Ga0395900_0128549 3300037418 Bacteria 2597
101 Ga0395905_0072672 3300037471 Bacteria 3225
102 Ga0395901_0014643 3300038443 Bacteria 7970
103 Ga0395901_0090829 3300038443 Bacteria 3196
104 Ga0451797_0075770 3300041453 Bacteria 1972
105 Ga0451833_1216210 3300041491 Bacteria 4519
106 Ga0439442_000063 3300042002 Bacteria 25468
107 Ga0439442_000239 3300042002 Bacteria 13434
108 Ga0450920_000021 3300042122 Bacteria 17923
109 Ga0450907_000100 3300042146 Bacteria 33093
110 Ga0439434_0000027 3300042435 Bacteria 36673
111 Ga0466965_0044688 3300044683 Bacteria 2190
112 Ga0466970_0004771 3300044765 Bacteria 6696
113 Ga0466960_0000549 3300044901 Bacteria 12909
114 Ga0466960_0027527 3300044901 Bacteria 2594
115 Ga0466967_0125091 3300045976 Bacteria 2381
116 Ga0495651_0005283 3300046462 Bacteria 9844
117 Ga0495653_0022494 3300046463 Bacteria 5101
118 Ga0495594_0007203 3300046499 Bacteria 5721
119 Ga0495667_0015702 3300046559 Bacteria 5119
120 Ga0495635_0003907 3300046663 Bacteria 10358
121 Ga0495657_0080147 3300046675 Bacteria 2113
122 Ga0495646_0040342 3300046680 Bacteria 2876
123 Ga0495672_0007790 3300047320 Bacteria 8010
124 Ga0495680_0006970 3300047322 Bacteria 10426
125 Ga0496100_0000015 3300048903 Bacteria 167108
126 Ga0496101_0000039 3300048904 Bacteria 164695
127 Ga0496102_0002962 3300048905 Bacteria 14384
128 Ga0496103_0001534 3300048906 Bacteria 15410
129 Ga0496104_0215064 3300048907 Bacteria 1834
130 Ga0496106_0001328 3300048909 Bacteria 18541
131 Ga0496106_0151782 3300048909 Bacteria 1828
132 Ga0496107_0000747 3300048910 Bacteria 18642
133 Ga0496108_0002774 3300048911 Bacteria 14037
134 Ga0496109_0000077 3300048912 Bacteria 103492
135 Ga0496109_0167230 3300048912 Bacteria 2062
136 Ga0496110_0003164 3300048913 Bacteria 12525
137 Ga0496110_0027177 3300048913 Bacteria 4903
138 Ga0496111_0080392 3300048914 Bacteria 2378
139 Ga0496113_0010742 3300048916 Bacteria 6069
140 Ga0496116_0004435 3300048919 Bacteria 13397
141 Ga0496117_0000232 3300048920 Bacteria 105479
142 Ga0496117_0007468 3300048920 Bacteria 10666
143 Ga0496118_0023154 3300048921 Bacteria 5405
144 Ga0496119_0001462 3300048922 Bacteria 28279
145 Ga0496119_0011504 3300048922 Bacteria 7316
146 Ga0496119_0016641 3300048922 Bacteria 5580
147 Ga0496119_0024782 3300048922 Bacteria 4209
148 Ga0496120_0001299 3300048923 Bacteria 31039
149 Ga0496120_0001843 3300048923 Bacteria 23608
150 Ga0496121_0000002 3300048924 Bacteria 1494588
151 Ga0496122_0000051 3300048925 Bacteria 265104
152 Ga0496122_0010334 3300048925 Bacteria 9648
153 Ga0496123_0002350 3300048926 Bacteria 23731
154 Ga0496124_0000002 3300048927 Bacteria 1494588
155 Ga0496124_0043479 3300048927 Bacteria 3862
156 Ga0496125_0000002 3300048928 Bacteria 1480920
157 Ga0496125_0003086 3300048928 Bacteria 20790
158 Ga0496126_0000011 3300048929 Bacteria 744275
159 Ga0496126_0009223 3300048929 Bacteria 10523
160 Ga0496126_0092613 3300048929 Bacteria 2655
161 Ga0501032_0005287 3300049569 Bacteria 9601
162 Ga0501034_0045097 3300049571 Bacteria 4456
163 Ga0501037_0004080 3300049573 Bacteria 10588
164 Ga0501038_0028499 3300049574 Bacteria 4961
165 Ga0501039_0013435 3300049575 Bacteria 6262
166 Ga0501043_0001766 3300049579 Bacteria 18592
167 Ga0501070_0001466 3300049586 Bacteria 21133
168 Ga0501070_0002579 3300049586 Bacteria 15844
169 Ga0501073_0010331 3300049589 Bacteria 6852
170 Ga0501044_0033048 3300049823 Bacteria 5436
171 nmdc:mga0yw44_95055_c1 3300050492 Bacteria 1890
172 nmdc:mga05p37_106_c1 3300050507 Bacteria 43810
173 nmdc:mga05p37_5401_c1 3300050507 Bacteria 15025
174 nmdc:mga09592_12_c1 3300050508 Bacteria 104148
175 nmdc:mga09592_26405_c1 3300050508 Bacteria 4811
176 nmdc:mga0qj67_173_c1 3300050509 Bacteria 43526
177 nmdc:mga0qj67_6_c2 3300050509 Bacteria 123818
178 nmdc:mga0qj67_76672_c1 3300050509 Bacteria 2674
179 nmdc:mga0qj67_94618_c1 3300050509 Bacteria 2403
180 nmdc:mga06r32_10_c1 3300050510 Bacteria 113242
181 nmdc:mga06r32_80559_c1 3300050510 Bacteria 3169
182 nmdc:mga08y16_90889_c1 3300050511 Bacteria 3182
183 Ga0500643_016034 3300053087 Bacteria 2553
184 Ga0500646_0001189 3300053090 Bacteria 6993
185 Ga0500652_025696 3300053131 Bacteria 2260
186 Ga0500588_0000663 3300053146 Bacteria 5756
187 Ga0500645_000046 3300053730 Bacteria 106127
188 Ga0590075_000671 3300059424 Bacteria 9083

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300053131 Ga0500652_025696 Ga0500652_025696_26_1342 411
2 3300050510 nmdc:mga06r32_80559_c1 nmdc:mga06r32_80559_c1_1865_3148 427
3 3300035172 Ga0373955_0020242 Ga0373955_0020242_1885_3321 456
4 3300048910 Ga0496107_0000747 Ga0496107_0000747_17108_18496 459
5 3300037471 Ga0395905_0072672 Ga0395905_0072672_1642_3114 482
6 3300048929 Ga0496126_0092613 Ga0496126_0092613_920_2497 498
7 3300005434 Ga0070709_10000052 Ga0070709_1000005225 502
8 3300025906 Ga0207699_10000060 Ga0207699_1000006026 502
9 3300048928 Ga0496125_0003086 Ga0496125_0003086_15349_16881 504
10 iso_pu_bacteria 2946033335 2946036421 506
11 iso_pu_bacteria 2738541274 2738704837 507
12 iso_pu_bacteria 2738543028 2739330007 507
13 3300048913 Ga0496110_0027177 Ga0496110_0027177_1401_2933 508
14 3300048916 Ga0496113_0010742 Ga0496113_0010742_3089_4621 508
15 iso_pu_bacteria 2643221687 2644488977 508
16 iso_pu_bacteria 2842134933 2842139286 509
17 3300006847 Ga0075431_100006463 Ga0075431_1000064636 510
18 3300006880 Ga0075429_100000494 Ga0075429_10000049413 510
19 3300009147 Ga0114129_10028839 Ga0114129_100288392 510
20 3300044901 Ga0466960_0027527 Ga0466960_0027527_629_2167 510
21 3300050508 nmdc:mga09592_26405_c1 nmdc:mga09592_26405_c1_2467_4005 510
22 3300050509 nmdc:mga0qj67_76672_c1 nmdc:mga0qj67_76672_c1_311_1849 510
23 iso_pu_bacteria 2643221692 2644516020 510
24 iso_pu_bacteria 2744054611 2744956803 510
25 3300006038 Ga0075365_10004457 Ga0075365_100044577 511
26 3300006846 Ga0075430_100044987 Ga0075430_1000449874 511
27 3300013307 Ga0157372_10117123 Ga0157372_101171231 511
28 3300047320 Ga0495672_0007790 Ga0495672_0007790_4724_6358 511
29 3300050492 nmdc:mga0yw44_95055_c1 nmdc:mga0yw44_95055_c1_101_1645 511
30 3300050511 nmdc:mga08y16_90889_c1 nmdc:mga08y16_90889_c1_604_2148 511
31 3300053087 Ga0500643_016034 Ga0500643_016034_27_1649 511
32 3300053730 Ga0500645_000046 Ga0500645_000046_70557_72179 511
33 iso_pu_bacteria 2757320536 2758227322 511
34 iso_pu_bacteria 2929212328 2929217403 511
35 3300005327 Ga0070658_10023445 Ga0070658_100234456 512
36 3300005466 Ga0070685_10007259 Ga0070685_100072596 512
37 3300005548 Ga0070665_100000653 Ga0070665_10000065326 512
38 3300006844 Ga0075428_100000577 Ga0075428_10000057737 512
39 3300009098 Ga0105245_10076793 Ga0105245_100767933 512
40 3300009147 Ga0114129_10199914 Ga0114129_101999143 512
41 3300010375 Ga0105239_10042908 Ga0105239_100429083 512
42 3300025273 Ga0209673_1024270 Ga0209673_10242702 512
43 3300025303 Ga0209051_1019457 Ga0209051_10194572 512
44 3300025927 Ga0207687_10143395 Ga0207687_101433952 512
45 3300028379 Ga0268266_10000659 Ga0268266_1000065918 512
46 3300035241 Ga0373961_0000873 Ga0373961_0000873_7838_9397 512
47 3300038443 Ga0395901_0014643 Ga0395901_0014643_724_2274 512
48 3300048914 Ga0496111_0080392 Ga0496111_0080392_589_2148 512
49 3300049569 Ga0501032_0005287 Ga0501032_0005287_7355_8932 512
50 3300049571 Ga0501034_0045097 Ga0501034_0045097_266_1843 512
51 3300049573 Ga0501037_0004080 Ga0501037_0004080_2634_4211 512
52 3300049574 Ga0501038_0028499 Ga0501038_0028499_880_2457 512
53 3300049575 Ga0501039_0013435 Ga0501039_0013435_2042_3619 512
54 3300049579 Ga0501043_0001766 Ga0501043_0001766_2377_3954 512
55 3300049586 Ga0501070_0001466 Ga0501070_0001466_234_1811 512
56 3300049589 Ga0501073_0010331 Ga0501073_0010331_4239_5816 512
57 3300049823 Ga0501044_0033048 Ga0501044_0033048_2169_3746 512
58 3300050509 nmdc:mga0qj67_173_c1 nmdc:mga0qj67_173_c1_10528_12144 512
59 iso_pu_bacteria 2738541264 2738664581 512
60 iso_pu_bacteria 2738541356 2739143716 512
61 iso_pu_bacteria 2902799365 2902803453 512
62 3300005564 Ga0070664_100226168 Ga0070664_1002261681 513
63 3300050509 nmdc:mga0qj67_94618_c1 nmdc:mga0qj67_94618_c1_478_2046 513
64 3300032126 Ga0307415_100017153 Ga0307415_1000171532 514
65 3300035692 Ga0373935_0050567 Ga0373935_0050567_655_2262 514
66 3300046499 Ga0495594_0007203 Ga0495594_0007203_3035_4594 514
67 3300009147 Ga0114129_10000004 Ga0114129_1000000440 515
68 3300048922 Ga0496119_0001462 Ga0496119_0001462_1621_3186 515
69 3300048923 Ga0496120_0001299 Ga0496120_0001299_29315_30880 515
70 3300050507 nmdc:mga05p37_5401_c1 nmdc:mga05p37_5401_c1_12261_13814 515
71 3300003792 Ga0055540_1000143 Ga0055540_100014341 516
72 3300005367 Ga0070667_100001204 Ga0070667_10000120415 516
73 3300006186 Ga0075369_10012073 Ga0075369_100120732 516
74 3300006186 Ga0075369_10021363 Ga0075369_100213633 516
75 3300009147 Ga0114129_10000082 Ga0114129_1000008292 516
76 3300009545 Ga0105237_10033122 Ga0105237_100331225 516
77 3300013250 Ga0171462_1001 Ga0171462_1001994 516
78 3300025303 Ga0209051_1000328 Ga0209051_100032835 516
79 3300025914 Ga0207671_10061431 Ga0207671_100614313 516
80 3300025986 Ga0207658_10003075 Ga0207658_100030753 516
81 3300031251 Ga0265327_10000888 Ga0265327_1000088833 516
82 3300041491 Ga0451833_1216210 Ga0451833_1216210_681_2240 516
83 3300044683 Ga0466965_0044688 Ga0466965_0044688_144_1709 516
84 3300048903 Ga0496100_0000015 Ga0496100_0000015_145930_147495 516
85 3300048904 Ga0496101_0000039 Ga0496101_0000039_143379_144944 516
86 3300048905 Ga0496102_0002962 Ga0496102_0002962_3539_5104 516
87 3300048906 Ga0496103_0001534 Ga0496103_0001534_9654_11219 516
88 3300048909 Ga0496106_0001328 Ga0496106_0001328_222_1787 516
89 3300048911 Ga0496108_0002774 Ga0496108_0002774_8816_10381 516
90 3300048912 Ga0496109_0000077 Ga0496109_0000077_44026_45591 516
91 3300048913 Ga0496110_0003164 Ga0496110_0003164_1935_3500 516
92 3300048919 Ga0496116_0004435 Ga0496116_0004435_8594_10159 516
93 3300048920 Ga0496117_0007468 Ga0496117_0007468_412_1977 516
94 3300048921 Ga0496118_0023154 Ga0496118_0023154_430_1995 516
95 3300048922 Ga0496119_0011504 Ga0496119_0011504_4995_6560 516
96 3300048924 Ga0496121_0000002 Ga0496121_0000002_1166921_1168486 516
97 3300048925 Ga0496122_0000051 Ga0496122_0000051_190727_192292 516
98 3300048927 Ga0496124_0000002 Ga0496124_0000002_326103_327668 516
99 3300048928 Ga0496125_0000002 Ga0496125_0000002_1166921_1168486 516
100 3300048929 Ga0496126_0000011 Ga0496126_0000011_326103_327668 516
101 3300049586 Ga0501070_0002579 Ga0501070_0002579_4218_5786 516
102 3300005345 Ga0070692_10016796 Ga0070692_100167961 517
103 3300005365 Ga0070688_100028498 Ga0070688_1000284984 517
104 3300005366 Ga0070659_100071846 Ga0070659_1000718464 517
105 3300005438 Ga0070701_10021864 Ga0070701_100218641 517
106 3300005535 Ga0070684_100146595 Ga0070684_1001465952 517
107 3300005616 Ga0068852_100076771 Ga0068852_1000767711 517
108 3300005840 Ga0068870_10048852 Ga0068870_100488522 517
109 3300009098 Ga0105245_10049835 Ga0105245_100498354 517
110 3300009148 Ga0105243_10015763 Ga0105243_100157634 517
111 3300009553 Ga0105249_10045377 Ga0105249_100453774 517
112 3300013306 Ga0163162_10206787 Ga0163162_102067872 517
113 3300014326 Ga0157380_10099230 Ga0157380_100992302 517
114 3300014745 Ga0157377_10029624 Ga0157377_100296243 517
115 3300025901 Ga0207688_10015791 Ga0207688_100157914 517
116 3300025908 Ga0207643_10002086 Ga0207643_100020862 517
117 3300025927 Ga0207687_10051714 Ga0207687_100517144 517
118 3300025935 Ga0207709_10074433 Ga0207709_100744331 517
119 3300026075 Ga0207708_10001369 Ga0207708_1000136911 517
120 3300026089 Ga0207648_10006381 Ga0207648_1000638111 517
121 3300026118 Ga0207675_100016535 Ga0207675_1000165354 517
122 3300031852 Ga0307410_10015485 Ga0307410_100154853 517
123 3300031852 Ga0307410_10120863 Ga0307410_101208632 517
124 3300032126 Ga0307415_100020600 Ga0307415_1000206002 517
125 3300044901 Ga0466960_0000549 Ga0466960_0000549_8848_10416 517
126 3300048909 Ga0496106_0151782 Ga0496106_0151782_133_1695 517
127 3300048912 Ga0496109_0167230 Ga0496109_0167230_254_1816 517
128 3300035113 Ga0373936_0002879 Ga0373936_0002879_2702_4330 518
129 3300036401 Ga0373937_0068982 Ga0373937_0068982_1417_3045 518
130 3300041453 Ga0451797_0075770 Ga0451797_0075770_211_1788 518
131 3300046462 Ga0495651_0005283 Ga0495651_0005283_2716_4344 518
132 3300046463 Ga0495653_0022494 Ga0495653_0022494_2398_4026 518
133 3300046559 Ga0495667_0015702 Ga0495667_0015702_370_1998 518
134 3300046663 Ga0495635_0003907 Ga0495635_0003907_5510_7138 518
135 3300046675 Ga0495657_0080147 Ga0495657_0080147_191_1819 518
136 3300046680 Ga0495646_0040342 Ga0495646_0040342_973_2601 518
137 3300047322 Ga0495680_0006970 Ga0495680_0006970_5479_7107 518
138 3300053090 Ga0500646_0001189 Ga0500646_0001189_5406_6971 518
139 3300053146 Ga0500588_0000663 Ga0500588_0000663_4174_5739 518
140 iso_pu_bacteria 8016254467 8016257810 518
141 3300006846 Ga0075430_100000816 Ga0075430_10000081616 519
142 3300025933 Ga0207706_10010498 Ga0207706_100104985 519
143 iso_pu_bacteria 2946041624 2946043865 519
144 3300037418 Ga0395900_0128549 Ga0395900_0128549_1013_2587 520
145 iso_pu_bacteria 2833709550 2833709753 520
146 3300006048 Ga0075363_100061958 Ga0075363_1000619582 521
147 3300031727 Ga0316576_10124256 Ga0316576_101242561 521
148 3300031852 Ga0307410_10005625 Ga0307410_100056256 521
149 3300031903 Ga0307407_10058570 Ga0307407_100585702 521
150 3300031911 Ga0307412_10005504 Ga0307412_100055045 521
151 3300031995 Ga0307409_100000650 Ga0307409_10000065011 521
152 3300032002 Ga0307416_100001593 Ga0307416_1000015934 521
153 3300032126 Ga0307415_100000175 Ga0307415_10000017511 521
154 3300037068 Ga0373925_0083513 Ga0373925_0083513_641_2269 521
155 iso_pu_bacteria 2643221546 2643752481 521
156 iso_pu_bacteria 2995726249 2995727407 521
157 iso_pu_bacteria 8004212874 8004215398 521
158 3300048907 Ga0496104_0215064 Ga0496104_0215064_183_1769 522
159 3300048920 Ga0496117_0000232 Ga0496117_0000232_99166_100752 522
160 3300048922 Ga0496119_0024782 Ga0496119_0024782_2478_4064 522
161 3300048923 Ga0496120_0001843 Ga0496120_0001843_151_1737 522
162 3300048925 Ga0496122_0010334 Ga0496122_0010334_7914_9500 522
163 3300048926 Ga0496123_0002350 Ga0496123_0002350_20571_22157 522
164 3300048927 Ga0496124_0043479 Ga0496124_0043479_158_1744 522
165 3300048929 Ga0496126_0009223 Ga0496126_0009223_8766_10352 522
166 3300059424 Ga0590075_000671 Ga0590075_000671_1536_3134 522
167 3300006846 Ga0075430_100011884 Ga0075430_1000118843 523
168 3300006847 Ga0075431_100058973 Ga0075431_1000589733 523
169 3300006880 Ga0075429_100015613 Ga0075429_1000156133 523
170 3300050507 nmdc:mga05p37_106_c1 nmdc:mga05p37_106_c1_3832_5460 523
171 3300050508 nmdc:mga09592_12_c1 nmdc:mga09592_12_c1_28578_30206 523
172 3300050509 nmdc:mga0qj67_6_c2 nmdc:mga0qj67_6_c2_48249_49877 523
173 3300050510 nmdc:mga06r32_10_c1 nmdc:mga06r32_10_c1_38351_39979 523
174 3300003578 Ga0006562J51391_1111915 Ga0006562J51391_111191522 524
175 3300048922 Ga0496119_0016641 Ga0496119_0016641_1113_2768 524
176 iso_pu_bacteria 2643221619 2644112326 524
177 iso_pu_bacteria 2775506735 2775656349 524
178 iso_pu_bacteria 2808606357 2808830533 524
179 iso_pu_bacteria 2808606360 2808851728 524
180 3300006038 Ga0075365_10020185 Ga0075365_100201852 525
181 3300032005 Ga0307411_10036805 Ga0307411_100368052 526
182 3300045976 Ga0466967_0125091 Ga0466967_0125091_552_2234 526
183 3300013105 Ga0157369_10062652 Ga0157369_100626525 528
184 3300031731 Ga0307405_10024996 Ga0307405_100249964 528
185 3300031903 Ga0307407_10030420 Ga0307407_100304203 528
186 3300032004 Ga0307414_10031097 Ga0307414_100310974 528
187 iso_pu_bacteria 2811994871 2812321910 529
188 iso_pu_bacteria 2919051321 2919054107 529
189 iso_pu_bacteria 2857740372 2857744339 530
190 iso_pu_bacteria 2939598168 2939599844 530
191 iso_pu_bacteria 2945916053 2945916542 530
192 iso_pu_bacteria 2945941187 2945943081 530
193 iso_pu_bacteria 2953998280 2954001147 530
194 iso_pu_bacteria 8054107350 8054111290 530
195 3300044765 Ga0466970_0004771 Ga0466970_0004771_3536_5242 531
196 3300037312 Ga0395899_0031241 Ga0395899_0031241_2138_3763 533
197 3300037418 Ga0395900_0004303 Ga0395900_0004303_6423_8048 533
198 3300038443 Ga0395901_0090829 Ga0395901_0090829_1197_2822 533
199 3300003578 Ga0006562J51391_1013222 Ga0006562J51391_10132223 534
200 3300009148 Ga0105243_10028674 Ga0105243_100286743 534
201 3300025935 Ga0207709_10026023 Ga0207709_100260232 534
202 3300031548 Ga0307408_100015777 Ga0307408_1000157775 534
203 3300031731 Ga0307405_10008812 Ga0307405_100088123 534
204 3300031731 Ga0307405_10020402 Ga0307405_100204022 534
205 3300031824 Ga0307413_10022577 Ga0307413_100225775 534
206 3300031852 Ga0307410_10009175 Ga0307410_100091755 534
207 3300031852 Ga0307410_10013702 Ga0307410_100137021 534
208 3300031903 Ga0307407_10001071 Ga0307407_100010715 534
209 3300031911 Ga0307412_10012674 Ga0307412_100126744 534
210 3300031995 Ga0307409_100009126 Ga0307409_1000091265 534
211 3300032002 Ga0307416_100012243 Ga0307416_1000122435 534
212 3300032002 Ga0307416_100071118 Ga0307416_1000711182 534
213 3300032126 Ga0307415_100033413 Ga0307415_1000334133 534
214 3300042002 Ga0439442_000063 Ga0439442_000063_4514_6118 534
215 3300042002 Ga0439442_000239 Ga0439442_000239_5151_6755 534
216 3300042122 Ga0450920_000021 Ga0450920_000021_4574_6178 534
217 3300042146 Ga0450907_000100 Ga0450907_000100_27755_29359 534
218 3300042435 Ga0439434_0000027 Ga0439434_0000027_13641_15245 534

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF23545

11

66

0.95

PF04055

Radical_SAM

Radical SAM superfamily

117

280

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
5v1s-assembly2.cif.gz_B crystal structure of streptococcus suis suib bound to s-adenosylmethionine 0.7773 119 303
3cb8-assembly1.cif.gz_A 4fe-4s-pyruvate formate-lyase activating enzyme in complex with adomet and a peptide substrate 0.7175 131 334
7tol-assembly1.cif.gz_A x-ray crystal structure of glycerol dibiphytanyl glycerol tetraether - macrocyclic archaeol synthase (gdgt-mas) from methanocaldococcus jannaschii with archaeal lipid, 5'deoxyadenosine, and methionine bound 0.7092 23 522
6b4c-assembly9.cif.gz_I structure of viperin from trichoderma virens 0.7076 118 305
7tom-assembly1.cif.gz_A x-ray crystal structure of glycerol dibiphytanyl glycerol tetraether - macrocyclic archaeol synthase (gdgt-mas) from methanocaldococcus jannaschii with bacterial lipid substrate analog, 5'deoxyadenosine, and methionine bound 0.7046 21 519
ID Description Score Start End Superfamily
af_O69696_93_337_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8536 129 361 3.20.20.70
af_Q58036_89_385_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8147 132 391 3.20.20.70
af_O69696_93_337_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8107 129 361 3.20.20.70
af_I1KTQ5_72_400_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.7505 119 355 3.20.20.70
af_O33183_77_264_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.7475 123 290 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A5C9C0Y7-F1-model_v4 Radical SAM protein 0.9059 204 379
AF-A0A524GWJ8-F1-model_v4 Radical SAM protein 0.9021 182 382 GO:0003824
GO:0046872
GO:0051536
AF-A0A519SXK6-F1-model_v4 deleted 0.8942 120 302
AF-A0A1Q8QI73-F1-model_v4 Molybdopterin-based tungsten cofactor biosynthesis protein 0.8936 119 302 GO:0003824
GO:0046872
GO:0051536
AF-A0A7J2H677-F1-model_v4 Radical SAM protein 0.8797 184 305 GO:0005525
GO:0006777
GO:0046872
GO:0051539
GO:0061798
GO:0061799

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