F330232

General Info

Members Datasets Scaffolds Average Seq Length
218 143 210 362

Family's Representative Sequence

Representative Sequence 3300041512|Ga0451853_0364337|Ga0451853_0364337_2414_3442
Length 342
Sequence MHYAQNIFIRVHTDAGMYGVGECSAFPMIVGETQATCFEMAKDFAALWKNKNAAAIEERLQELHSFTAFNATIKSAFDMALYDLAAKAAGQPLYRFLGGISKKELETDLTIGIDTPENMAARAVDFVKRGVRIIKIKLGKNAAEDVERVRLIRAAAGASAGLRIDANQGWSYEDAVFALAAMAPYDIQFCEQPMRHWNDDRLPALVKQSPIKIMADESVFDHHDAQRIIAAGACDYVNIKFAKSGGIWEARKIHSVCQQHTIPCMMGGMLESRIALSAFAHFALAHDNVVFYDMDTCMLGHKTDPVTGGVQYKGFFLEVPETPGIGADADSAFLKTLEKVTI

Samples

Sample ID Description Type Environment
1 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
2 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
3 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
4 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
5 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
6 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
7 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
8 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
9 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
10 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
11 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
12 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
13 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
14 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
15 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
16 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
17 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
18 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
19 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
20 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
21 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
22 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
23 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
24 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
32 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
43 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
48 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
49 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
50 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
51 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
52 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
53 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
54 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
55 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
58 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
59 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
60 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
61 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
62 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
63 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
90 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
91 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
92 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
93 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
94 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
95 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
96 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
97 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
98 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
99 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
100 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
101 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
102 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
103 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
104 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
105 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
106 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
107 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
108 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
109 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
110 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
111 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
112 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
113 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
114 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
115 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
116 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
117 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
118 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
119 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
120 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
121 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
122 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
123 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
124 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
125 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
126 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
127 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
128 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
129 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
130 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
131 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
132 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
133 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
134 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
135 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
136 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
137 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
138 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
139 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
140 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
141 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
142 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
143 8055588893 Parapedobacter lycopersici KACC 18788 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.33
Metatranscriptomes 0
Isolates 3.67

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.72
Nodule 0
Rhizoplane 0.46
Rhizosphere 83.94
Stem 0
Stem Tuber 0
Unclassified 6.88

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24737J22298_10004411 3300001990 Bacteria 4907
2 JGI24737J22298_10010989 3300001990 Bacteria 2972
3 JGI24735J21928_10000001 3300002067 Bacteria 650042
4 JGI25162J39368_1000089 3300002737 Bacteria 104054
5 rootH1_10113118 3300003316 Bacteria 1565
6 rootH2_10000343 3300003320 Bacteria 102217
7 rootH2_10035331 3300003320 Bacteria 7999
8 rootL2_10081586 3300003322 Bacteria 3961
9 rootL2_10144077 3300003322 Bacteria 2977
10 rootH1_10102135 3300003323 Bacteria 6055
11 Ga0065714_10075054 3300005288 Bacteria 2953
12 Ga0070658_10000018 3300005327 Bacteria 200558
13 Ga0070676_10003126 3300005328 Bacteria 8551
14 Ga0070680_100021226 3300005336 Bacteria 5159
15 Ga0068868_100120114 3300005338 Bacteria 2143
16 Ga0070668_100057739 3300005347 Unclassified 3000
17 Ga0070671_100015831 3300005355 Bacteria 6092
18 Ga0070671_100241683 3300005355 Bacteria 1533
19 Ga0070673_100213647 3300005364 Bacteria 1667
20 Ga0070659_100001402 3300005366 Bacteria 17377
21 Ga0070659_100013342 3300005366 Bacteria 6112
22 Ga0070678_100004572 3300005456 Bacteria 7858
23 Ga0070662_100000225 3300005457 Bacteria 33224
24 Ga0070681_10050482 3300005458 Bacteria 4150
25 Ga0068867_100003673 3300005459 Bacteria 10797
26 Ga0070679_100015739 3300005530 Bacteria 7275
27 Ga0068853_100054852 3300005539 Bacteria 3435
28 Ga0068853_100358038 3300005539 Unclassified 1359
29 Ga0070672_100058368 3300005543 Unclassified 3032
30 Ga0070665_100000072 3300005548 Bacteria 198575
31 Ga0068855_100000850 3300005563 Bacteria 37848
32 Ga0068855_100008083 3300005563 Bacteria 12711
33 Ga0068855_100041848 3300005563 Bacteria 5430
34 Ga0068855_100179698 3300005563 Bacteria 2393
35 Ga0068857_100010152 3300005577 Bacteria 8185
36 Ga0068856_100000263 3300005614 Bacteria 57295
37 Ga0068856_100024693 3300005614 Bacteria 5853
38 Ga0068852_100004151 3300005616 Bacteria 10205
39 Ga0068860_100013899 3300005843 Bacteria 7893
40 Ga0075366_10004619 3300006195 Bacteria 7400
41 Ga0075366_10013771 3300006195 Bacteria 4609
42 Ga0075366_10026872 3300006195 Bacteria 3374
43 Ga0097621_100012896 3300006237 Bacteria 6211
44 Ga0068871_100001609 3300006358 Bacteria 15193
45 Ga0068865_100002175 3300006881 Bacteria 11550
46 Ga0105240_10000237 3300009093 Bacteria 109895
47 Ga0105240_10005142 3300009093 Bacteria 19583
48 Ga0105240_10053400 3300009093 Bacteria 5071
49 Ga0105240_10072572 3300009093 Bacteria 4254
50 Ga0105240_10210254 3300009093 Bacteria 2274
51 Ga0105240_10268587 3300009093 Bacteria 1965
52 Ga0105241_10043015 3300009174 Bacteria 3420
53 Ga0105241_10094559 3300009174 Bacteria 2364
54 Ga0105241_10101592 3300009174 Bacteria 2286
55 Ga0105242_10074647 3300009176 Bacteria 2822
56 Ga0105237_10000589 3300009545 Bacteria 50628
57 Ga0105237_10001732 3300009545 Bacteria 28199
58 Ga0105237_10003190 3300009545 Bacteria 19675
59 Ga0105238_10047577 3300009551 Bacteria 4324
60 Ga0105239_10000132 3300010375 Bacteria 105380
61 Ga0105239_10002156 3300010375 Bacteria 25330
62 Ga0105239_10004736 3300010375 Bacteria 16155
63 Ga0105239_10021843 3300010375 Bacteria 7055
64 Ga0105239_10160556 3300010375 Bacteria 2511
65 Ga0105246_10018121 3300011119 Bacteria 4485
66 Ga0157373_10010004 3300013100 Bacteria 6988
67 Ga0157371_10000251 3300013102 Bacteria 74986
68 Ga0157371_10014703 3300013102 Bacteria 5892
69 Ga0157371_10035204 3300013102 Bacteria 3588
70 Ga0157370_10030775 3300013104 Bacteria 5258
71 Ga0157369_10023620 3300013105 Bacteria 6848
72 Ga0157369_10152862 3300013105 Bacteria 2439
73 Ga0157374_10000135 3300013296 Bacteria 67340
74 Ga0157374_10001744 3300013296 Bacteria 18253
75 Ga0157378_10196139 3300013297 Bacteria 1907
76 Ga0157378_10230194 3300013297 Bacteria 1766
77 Ga0163162_10000010 3300013306 Bacteria 302032
78 Ga0163162_10006518 3300013306 Bacteria 11308
79 Ga0163162_10103148 3300013306 Bacteria 2946
80 Ga0157372_10000266 3300013307 Bacteria 57783
81 Ga0157372_10007965 3300013307 Bacteria 11267
82 Ga0157372_10048221 3300013307 Bacteria 4735
83 Ga0157375_10249604 3300013308 Bacteria 1935
84 Ga0157375_10519043 3300013308 Unclassified 1355
85 Ga0157380_10006635 3300014326 Bacteria 8164
86 Ga0157380_10035880 3300014326 Bacteria 3833
87 Ga0157377_10004848 3300014745 Bacteria 6257
88 Ga0157376_10099429 3300014969 Bacteria 2538
89 Ga0163161_10013124 3300017792 Bacteria 5759
90 Ga0209437_100221 3300025233 Bacteria 104135
91 Ga0209233_1007117 3300025261 Bacteria 3565
92 Ga0207647_10000058 3300025904 Bacteria 84631
93 Ga0207647_10000623 3300025904 Bacteria 27546
94 Ga0207645_10006242 3300025907 Bacteria 8563
95 Ga0207705_10000036 3300025909 Bacteria 200787
96 Ga0207654_10001991 3300025911 Bacteria 10508
97 Ga0207654_10018647 3300025911 Bacteria 3646
98 Ga0207654_10025825 3300025911 Bacteria 3174
99 Ga0207707_10045791 3300025912 Bacteria 3811
100 Ga0207695_10000013 3300025913 Bacteria 821265
101 Ga0207695_10003855 3300025913 Bacteria 20759
102 Ga0207695_10106486 3300025913 Bacteria 2790
103 Ga0207671_10000272 3300025914 Bacteria 77080
104 Ga0207671_10002295 3300025914 Bacteria 20672
105 Ga0207671_10004508 3300025914 Bacteria 13258
106 Ga0207671_10057721 3300025914 Bacteria 2877
107 Ga0207660_10024942 3300025917 Bacteria 4053
108 Ga0207652_10018296 3300025921 Bacteria 5746
109 Ga0207694_10027715 3300025924 Bacteria 4315
110 Ga0207659_10129833 3300025926 Unclassified 1943
111 Ga0207690_10001301 3300025932 Bacteria 15722
112 Ga0207706_10000317 3300025933 Bacteria 52169
113 Ga0207669_10037395 3300025937 Bacteria 2785
114 Ga0207704_10000044 3300025938 Bacteria 86753
115 Ga0207691_10008798 3300025940 Bacteria 9682
116 Ga0207667_10000009 3300025949 Bacteria 603135
117 Ga0207667_10057959 3300025949 Bacteria 4064
118 Ga0207668_10154007 3300025972 Unclassified 1783
119 Ga0207677_10050236 3300026023 Bacteria 2820
120 Ga0207702_10003290 3300026078 Bacteria 14903
121 Ga0207702_10014417 3300026078 Bacteria 6561
122 Ga0207648_10008831 3300026089 Bacteria 9705
123 Ga0207674_10030704 3300026116 Bacteria 5648
124 Ga0207683_10004151 3300026121 Bacteria 12537
125 Ga0207698_10002912 3300026142 Bacteria 10230
126 Ga0268266_10000089 3300028379 Bacteria 198566
127 Ga0268264_10005339 3300028381 Bacteria 10889
128 Ga0307517_10005628 3300028786 Bacteria 18796
129 Ga0307515_10000280 3300028794 Bacteria 125330
130 Ga0307515_10001599 3300028794 Bacteria 50542
131 Ga0307405_10249231 3300031731 Unclassified 1320
132 Ga0307412_10025709 3300031911 Bacteria 3650
133 Ga0307414_10043582 3300032004 Bacteria 3058
134 Ga0307414_10138855 3300032004 Bacteria 1899
135 Ga0307414_10210491 3300032004 Bacteria 1589
136 Ga0307507_10000362 3300033179 Bacteria 93053
137 Ga0307510_10007525 3300033180 Bacteria 12971
138 Ga0373925_0226358 3300037068 Bacteria 1494
139 Ga0395899_0000532 3300037312 Bacteria 41711
140 Ga0395899_0001954 3300037312 Bacteria 16948
141 Ga0395900_0000226 3300037418 Bacteria 88588
142 Ga0395900_0048591 3300037418 Bacteria 4371
143 Ga0395898_0005711 3300037466 Bacteria 13410
144 Ga0395905_0000068 3300037471 Bacteria 177163
145 Ga0395905_0008054 3300037471 Bacteria 10407
146 Ga0395901_0000136 3300038443 Bacteria 95382
147 Ga0395901_0009899 3300038443 Bacteria 9663
148 Ga0439436_0001857 3300041404 Bacteria 6238
149 Ga0451853_0364337 3300041512 Bacteria 4408
150 Ga0451853_2667583 3300041512 Bacteria 2116
151 Ga0439449_0014692 3300042007 Bacteria 2943
152 Ga0439457_002255 3300042014 Bacteria 5577
153 Ga0439462_0002412 3300042015 Bacteria 4340
154 Ga0451577_0082583 3300042876 Unclassified 2867
155 Ga0466969_0012583 3300044656 Bacteria 4460
156 Ga0466961_0056626 3300044693 Bacteria 2498
157 Ga0453684_0038934 3300044712 Bacteria 6487
158 Ga0466959_0000017 3300045049 Bacteria 143170
159 Ga0466959_0010543 3300045049 Bacteria 6613
160 Ga0466958_0004296 3300045836 Bacteria 7503
161 Ga0495650_0000132 3300046471 Bacteria 174226
162 Ga0495585_0000399 3300046492 Bacteria 42055
163 Ga0495585_0011691 3300046492 Bacteria 5191
164 Ga0495583_0069062 3300046506 Bacteria 1557
165 Ga0495606_0000100 3300046507 Bacteria 147592
166 Ga0495606_0092775 3300046507 Bacteria 1854
167 Ga0495610_0000739 3300046512 Bacteria 31000
168 Ga0495616_0001978 3300046513 Bacteria 13788
169 Ga0495616_0007234 3300046513 Bacteria 6652
170 Ga0495648_0019278 3300046524 Bacteria 4802
171 Ga0495648_0067508 3300046524 Bacteria 2091
172 Ga0495609_0004618 3300046538 Bacteria 7482
173 Ga0495622_0025119 3300046557 Bacteria 2783
174 Ga0495633_0000156 3300046558 Bacteria 89387
175 Ga0495668_0000021 3300046616 Bacteria 381308
176 Ga0495625_0000036 3300046660 Bacteria 221680
177 Ga0495625_0000222 3300046660 Bacteria 89536
178 Ga0495625_0001185 3300046660 Bacteria 33419
179 Ga0495625_0017263 3300046660 Bacteria 5651
180 Ga0495625_0018600 3300046660 Bacteria 5417
181 Ga0495625_0029359 3300046660 Bacteria 4114
182 Ga0495661_0002095 3300046665 Bacteria 15654
183 Ga0495661_0021356 3300046665 Bacteria 4222
184 Ga0495661_0027916 3300046665 Bacteria 3619
185 Ga0495658_0069087 3300046683 Bacteria 2047
186 Ga0495671_0049370 3300046692 Bacteria 2098
187 Ga0495671_0079073 3300046692 Bacteria 1612
188 Ga0495649_0000017 3300046694 Bacteria 221685
189 Ga0495660_0020268 3300046810 Bacteria 3811
190 Ga0495687_003877 3300047443 Bacteria 10500
191 Ga0495687_037668 3300047443 Bacteria 2152
192 Ga0495686_0002715 3300047472 Bacteria 16193
193 Ga0495686_0003277 3300047472 Bacteria 14155
194 Ga0495686_0043403 3300047472 Bacteria 2851
195 Ga0495678_006187 3300049459 Bacteria 6407
196 Ga0495682_0044603 3300049460 Bacteria 1622
197 Ga0501223_001256 3300049663 Bacteria 5924
198 nmdc:mga0k408_14271_c1 3300050493 Bacteria 4373
199 nmdc:mga0k408_57029_c1 3300050493 Bacteria 2267
200 nmdc:mga0k408_666_c2 3300050493 Bacteria 7418
201 Ga0500635_0002084 3300053080 Bacteria 4901
202 Ga0500635_0015866 3300053080 Bacteria 2231
203 Ga0500647_0076557 3300053091 Bacteria 1605
204 Ga0500583_0000127 3300053092 Bacteria 35082
205 Ga0500608_000615 3300053122 Bacteria 13102
206 Ga0500608_056620 3300053122 Bacteria 1878
207 Ga0500618_000023 3300053125 Bacteria 152444
208 Ga0500618_012080 3300053125 Bacteria 2272
209 Ga0500622_0002056 3300053156 Bacteria 14993
210 Ga0500624_000673 3300053157 Bacteria 8771

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300041512 Ga0451853_0364337 Ga0451853_0364337_2414_3442 341
2 3300001990 JGI24737J22298_10010989 JGI24737J22298_100109893 351
3 3300002737 JGI25162J39368_1000089 JGI25162J39368_100008997 351
4 3300003316 rootH1_10113118 rootH1_101131181 351
5 3300003320 rootH2_10000343 rootH2_1000034362 351
6 3300005327 Ga0070658_10000018 Ga0070658_10000018159 351
7 3300005328 Ga0070676_10003126 Ga0070676_100031264 351
8 3300005338 Ga0068868_100120114 Ga0068868_1001201141 351
9 3300005347 Ga0070668_100057739 Ga0070668_1000577393 351
10 3300005355 Ga0070671_100241683 Ga0070671_1002416831 351
11 3300005364 Ga0070673_100213647 Ga0070673_1002136471 351
12 3300005456 Ga0070678_100004572 Ga0070678_1000045724 351
13 3300005457 Ga0070662_100000225 Ga0070662_10000022527 351
14 3300005459 Ga0068867_100003673 Ga0068867_1000036734 351
15 3300005539 Ga0068853_100054852 Ga0068853_1000548522 351
16 3300005539 Ga0068853_100358038 Ga0068853_1003580381 351
17 3300005543 Ga0070672_100058368 Ga0070672_1000583682 351
18 3300005548 Ga0070665_100000072 Ga0070665_100000072115 351
19 3300005563 Ga0068855_100008083 Ga0068855_1000080838 351
20 3300005616 Ga0068852_100004151 Ga0068852_1000041514 351
21 3300005843 Ga0068860_100013899 Ga0068860_1000138996 351
22 3300006237 Ga0097621_100012896 Ga0097621_1000128965 351
23 3300006358 Ga0068871_100001609 Ga0068871_1000016093 351
24 3300006881 Ga0068865_100002175 Ga0068865_1000021757 351
25 3300009093 Ga0105240_10005142 Ga0105240_100051424 351
26 3300009093 Ga0105240_10268587 Ga0105240_102685872 351
27 3300009174 Ga0105241_10101592 Ga0105241_101015921 351
28 3300009176 Ga0105242_10074647 Ga0105242_100746472 351
29 3300009545 Ga0105237_10001732 Ga0105237_1000173221 351
30 3300009545 Ga0105237_10003190 Ga0105237_1000319013 351
31 3300009551 Ga0105238_10047577 Ga0105238_100475773 351
32 3300010375 Ga0105239_10000132 Ga0105239_1000013276 351
33 3300010375 Ga0105239_10002156 Ga0105239_100021568 351
34 3300010375 Ga0105239_10021843 Ga0105239_100218433 351
35 3300011119 Ga0105246_10018121 Ga0105246_100181213 351
36 3300013100 Ga0157373_10010004 Ga0157373_100100045 351
37 3300013102 Ga0157371_10035204 Ga0157371_100352043 351
38 3300013104 Ga0157370_10030775 Ga0157370_100307753 351
39 3300013296 Ga0157374_10000135 Ga0157374_1000013512 351
40 3300013296 Ga0157374_10001744 Ga0157374_100017444 351
41 3300013297 Ga0157378_10196139 Ga0157378_101961391 351
42 3300013306 Ga0163162_10000010 Ga0163162_1000001012 351
43 3300013307 Ga0157372_10048221 Ga0157372_100482213 351
44 3300013308 Ga0157375_10249604 Ga0157375_102496042 351
45 3300013308 Ga0157375_10519043 Ga0157375_105190431 351
46 3300014326 Ga0157380_10006635 Ga0157380_100066354 351
47 3300014745 Ga0157377_10004848 Ga0157377_100048481 351
48 3300014969 Ga0157376_10099429 Ga0157376_100994292 351
49 3300025233 Ga0209437_100221 Ga0209437_1002219 351
50 3300025904 Ga0207647_10000058 Ga0207647_1000005859 351
51 3300025907 Ga0207645_10006242 Ga0207645_100062424 351
52 3300025909 Ga0207705_10000036 Ga0207705_1000003635 351
53 3300025911 Ga0207654_10001991 Ga0207654_100019913 351
54 3300025911 Ga0207654_10025825 Ga0207654_100258253 351
55 3300025913 Ga0207695_10003855 Ga0207695_100038554 351
56 3300025914 Ga0207671_10057721 Ga0207671_100577211 351
57 3300025924 Ga0207694_10027715 Ga0207694_100277153 351
58 3300025926 Ga0207659_10129833 Ga0207659_101298332 351
59 3300025933 Ga0207706_10000317 Ga0207706_1000031719 351
60 3300025938 Ga0207704_10000044 Ga0207704_100000444 351
61 3300025940 Ga0207691_10008798 Ga0207691_100087987 351
62 3300025972 Ga0207668_10154007 Ga0207668_101540071 351
63 3300026023 Ga0207677_10050236 Ga0207677_100502363 351
64 3300026089 Ga0207648_10008831 Ga0207648_100088315 351
65 3300026121 Ga0207683_10004151 Ga0207683_100041516 351
66 3300026142 Ga0207698_10002912 Ga0207698_100029122 351
67 3300028379 Ga0268266_10000089 Ga0268266_10000089113 351
68 3300028381 Ga0268264_10005339 Ga0268264_1000533910 351
69 3300033180 Ga0307510_10007525 Ga0307510_100075257 351
70 3300037312 Ga0395899_0000532 Ga0395899_0000532_16766_17821 351
71 3300037312 Ga0395899_0001954 Ga0395899_0001954_13294_14349 351
72 3300037418 Ga0395900_0000226 Ga0395900_0000226_5220_6275 351
73 3300037418 Ga0395900_0048591 Ga0395900_0048591_1756_2811 351
74 3300037466 Ga0395898_0005711 Ga0395898_0005711_3488_4543 351
75 3300037471 Ga0395905_0000068 Ga0395905_0000068_96358_97413 351
76 3300037471 Ga0395905_0008054 Ga0395905_0008054_1415_2470 351
77 3300038443 Ga0395901_0000136 Ga0395901_0000136_27365_28420 351
78 3300038443 Ga0395901_0009899 Ga0395901_0009899_7988_9043 351
79 3300041512 Ga0451853_2667583 Ga0451853_2667583_210_1265 351
80 3300047443 Ga0495687_003877 Ga0495687_003877_5331_6386 351
81 3300053122 Ga0500608_000615 Ga0500608_000615_11739_12794 351
82 3300053156 Ga0500622_0002056 Ga0500622_0002056_12183_13238 351
83 iso_pu_bacteria 8055588893 8055590768 361
84 3300003322 rootL2_10144077 rootL2_101440771 365
85 3300005366 Ga0070659_100001402 Ga0070659_1000014025 365
86 3300006195 Ga0075366_10004619 Ga0075366_100046193 365
87 3300009174 Ga0105241_10094559 Ga0105241_100945592 365
88 3300013297 Ga0157378_10230194 Ga0157378_102301942 365
89 3300014326 Ga0157380_10035880 Ga0157380_100358802 365
90 3300025914 Ga0207671_10002295 Ga0207671_100022957 365
91 3300025932 Ga0207690_10001301 Ga0207690_100013016 365
92 3300025937 Ga0207669_10037395 Ga0207669_100373953 365
93 3300031731 Ga0307405_10249231 Ga0307405_102492311 365
94 3300031911 Ga0307412_10025709 Ga0307412_100257092 365
95 3300032004 Ga0307414_10043582 Ga0307414_100435822 365
96 3300032004 Ga0307414_10138855 Ga0307414_101388552 365
97 3300032004 Ga0307414_10210491 Ga0307414_102104911 365
98 3300037068 Ga0373925_0226358 Ga0373925_0226358_151_1248 365
99 3300041404 Ga0439436_0001857 Ga0439436_0001857_3366_4463 365
100 3300042007 Ga0439449_0014692 Ga0439449_0014692_1139_2236 365
101 3300042014 Ga0439457_002255 Ga0439457_002255_1868_2965 365
102 3300042015 Ga0439462_0002412 Ga0439462_0002412_3131_4228 365
103 3300042876 Ga0451577_0082583 Ga0451577_0082583_1187_2284 365
104 3300044712 Ga0453684_0038934 Ga0453684_0038934_5239_6336 365
105 3300045049 Ga0466959_0000017 Ga0466959_0000017_85730_86827 365
106 3300046507 Ga0495606_0092775 Ga0495606_0092775_685_1782 365
107 3300047472 Ga0495686_0003277 Ga0495686_0003277_3977_5074 365
108 3300049460 Ga0495682_0044603 Ga0495682_0044603_437_1534 365
109 3300049663 Ga0501223_001256 Ga0501223_001256_2174_3271 365
110 3300050493 nmdc:mga0k408_666_c2 nmdc:mga0k408_666_c2_4390_5487 365
111 3300053092 Ga0500583_0000127 Ga0500583_0000127_13680_14777 365
112 iso_pu_bacteria 2852623160 2852626952 365
113 iso_pu_bacteria 2884933994 2884937998 365
114 iso_pu_bacteria 2919437846 2919442207 365
115 3300003323 rootH1_10102135 rootH1_101021353 366
116 3300005614 Ga0068856_100000263 Ga0068856_10000026318 366
117 3300026078 Ga0207702_10003290 Ga0207702_100032901 366
118 iso_pu_bacteria 2599185184 2599477104 366
119 iso_pu_bacteria 2928078545 2928079017 366
120 iso_pu_bacteria 2928147474 2928148612 366
121 iso_pu_bacteria 2932082852 2932085666 366
122 3300005355 Ga0070671_100015831 Ga0070671_1000158312 368
123 3300028786 Ga0307517_10005628 Ga0307517_100056285 368
124 3300046506 Ga0495583_0069062 Ga0495583_0069062_240_1346 368
125 3300046665 Ga0495661_0002095 Ga0495661_0002095_3497_4603 368
126 3300053080 Ga0500635_0015866 Ga0500635_0015866_188_1294 368
127 3300003320 rootH2_10035331 rootH2_100353313 369
128 3300005288 Ga0065714_10075054 Ga0065714_100750543 369
129 3300005366 Ga0070659_100013342 Ga0070659_1000133424 369
130 3300005563 Ga0068855_100000850 Ga0068855_10000085027 369
131 3300005563 Ga0068855_100041848 Ga0068855_1000418481 369
132 3300005577 Ga0068857_100010152 Ga0068857_1000101523 369
133 3300005614 Ga0068856_100024693 Ga0068856_1000246933 369
134 3300006195 Ga0075366_10026872 Ga0075366_100268722 369
135 3300009093 Ga0105240_10000237 Ga0105240_1000023762 369
136 3300009093 Ga0105240_10210254 Ga0105240_102102542 369
137 3300009174 Ga0105241_10043015 Ga0105241_100430152 369
138 3300009545 Ga0105237_10000589 Ga0105237_100005893 369
139 3300010375 Ga0105239_10004736 Ga0105239_100047369 369
140 3300010375 Ga0105239_10160556 Ga0105239_101605562 369
141 3300013102 Ga0157371_10000251 Ga0157371_1000025132 369
142 3300013105 Ga0157369_10023620 Ga0157369_100236203 369
143 3300013105 Ga0157369_10152862 Ga0157369_101528622 369
144 3300013306 Ga0163162_10006518 Ga0163162_100065185 369
145 3300013307 Ga0157372_10000266 Ga0157372_100002663 369
146 3300017792 Ga0163161_10013124 Ga0163161_100131244 369
147 3300025261 Ga0209233_1007117 Ga0209233_10071173 369
148 3300025904 Ga0207647_10000623 Ga0207647_1000062310 369
149 3300025911 Ga0207654_10018647 Ga0207654_100186472 369
150 3300025913 Ga0207695_10000013 Ga0207695_1000001363 369
151 3300025914 Ga0207671_10000272 Ga0207671_1000027241 369
152 3300025914 Ga0207671_10004508 Ga0207671_100045084 369
153 3300025949 Ga0207667_10000009 Ga0207667_10000009397 369
154 3300025949 Ga0207667_10057959 Ga0207667_100579593 369
155 3300026078 Ga0207702_10014417 Ga0207702_100144174 369
156 3300026116 Ga0207674_10030704 Ga0207674_100307044 369
157 3300028794 Ga0307515_10000280 Ga0307515_10000280106 369
158 3300028794 Ga0307515_10001599 Ga0307515_1000159939 369
159 3300033179 Ga0307507_10000362 Ga0307507_1000036264 369
160 3300046492 Ga0495585_0011691 Ga0495585_0011691_152_1261 369
161 3300046524 Ga0495648_0019278 Ga0495648_0019278_2622_3731 369
162 3300046524 Ga0495648_0067508 Ga0495648_0067508_781_1890 369
163 3300046538 Ga0495609_0004618 Ga0495609_0004618_3649_4758 369
164 3300046557 Ga0495622_0025119 Ga0495622_0025119_808_1917 369
165 3300046558 Ga0495633_0000156 Ga0495633_0000156_51809_52918 369
166 3300046616 Ga0495668_0000021 Ga0495668_0000021_2762_3871 369
167 3300046660 Ga0495625_0000222 Ga0495625_0000222_62711_63820 369
168 3300046660 Ga0495625_0001185 Ga0495625_0001185_159_1301 369
169 3300046660 Ga0495625_0018600 Ga0495625_0018600_139_1248 369
170 3300046660 Ga0495625_0029359 Ga0495625_0029359_2777_3886 369
171 3300046683 Ga0495658_0069087 Ga0495658_0069087_507_1616 369
172 3300047472 Ga0495686_0002715 Ga0495686_0002715_3017_4165 369
173 3300047472 Ga0495686_0043403 Ga0495686_0043403_1149_2297 369
174 3300050493 nmdc:mga0k408_57029_c1 nmdc:mga0k408_57029_c1_259_1368 369
175 3300053080 Ga0500635_0002084 Ga0500635_0002084_2277_3386 369
176 3300053091 Ga0500647_0076557 Ga0500647_0076557_225_1334 369
177 3300053122 Ga0500608_056620 Ga0500608_056620_244_1353 369
178 3300053125 Ga0500618_000023 Ga0500618_000023_108810_109919 369
179 3300053157 Ga0500624_000673 Ga0500624_000673_417_1526 369
180 3300001990 JGI24737J22298_10004411 JGI24737J22298_100044114 370
181 3300002067 JGI24735J21928_10000001 JGI24735J21928_10000001528 370
182 3300003322 rootL2_10081586 rootL2_100815862 370
183 3300005336 Ga0070680_100021226 Ga0070680_1000212263 370
184 3300005458 Ga0070681_10050482 Ga0070681_100504822 370
185 3300005530 Ga0070679_100015739 Ga0070679_1000157394 370
186 3300005563 Ga0068855_100179698 Ga0068855_1001796981 370
187 3300006195 Ga0075366_10013771 Ga0075366_100137716 370
188 3300009093 Ga0105240_10053400 Ga0105240_100534002 370
189 3300009093 Ga0105240_10072572 Ga0105240_100725724 370
190 3300013102 Ga0157371_10014703 Ga0157371_100147033 370
191 3300013306 Ga0163162_10103148 Ga0163162_101031482 370
192 3300013307 Ga0157372_10007965 Ga0157372_100079653 370
193 3300025912 Ga0207707_10045791 Ga0207707_100457911 370
194 3300025913 Ga0207695_10106486 Ga0207695_101064863 370
195 3300025917 Ga0207660_10024942 Ga0207660_100249422 370
196 3300025921 Ga0207652_10018296 Ga0207652_100182964 370
197 3300044656 Ga0466969_0012583 Ga0466969_0012583_3290_4402 370
198 3300044693 Ga0466961_0056626 Ga0466961_0056626_754_1866 370
199 3300045049 Ga0466959_0010543 Ga0466959_0010543_4638_5750 370
200 3300045836 Ga0466958_0004296 Ga0466958_0004296_3677_4789 370
201 3300046471 Ga0495650_0000132 Ga0495650_0000132_2756_3868 370
202 3300046492 Ga0495585_0000399 Ga0495585_0000399_24116_25228 370
203 3300046507 Ga0495606_0000100 Ga0495606_0000100_3286_4398 370
204 3300046512 Ga0495610_0000739 Ga0495610_0000739_23372_24484 370
205 3300046513 Ga0495616_0001978 Ga0495616_0001978_2979_4091 370
206 3300046513 Ga0495616_0007234 Ga0495616_0007234_5290_6402 370
207 3300046660 Ga0495625_0000036 Ga0495625_0000036_163701_164813 370
208 3300046660 Ga0495625_0017263 Ga0495625_0017263_144_1256 370
209 3300046665 Ga0495661_0021356 Ga0495661_0021356_1208_2320 370
210 3300046665 Ga0495661_0027916 Ga0495661_0027916_1199_2311 370
211 3300046692 Ga0495671_0049370 Ga0495671_0049370_613_1725 370
212 3300046692 Ga0495671_0079073 Ga0495671_0079073_341_1453 370
213 3300046694 Ga0495649_0000017 Ga0495649_0000017_56917_58029 370
214 3300046810 Ga0495660_0020268 Ga0495660_0020268_1803_2915 370
215 3300047443 Ga0495687_037668 Ga0495687_037668_476_1588 370
216 3300049459 Ga0495678_006187 Ga0495678_006187_333_1445 370
217 3300050493 nmdc:mga0k408_14271_c1 nmdc:mga0k408_14271_c1_2386_3498 370
218 3300053125 Ga0500618_012080 Ga0500618_012080_842_1954 370

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13378

MR_MLE_C

Enolase C-terminal domain-like

118

333

0.97

PF02746

MR_MLE_N

Mandelate racemase / muconate lactonizing enzyme, N-terminal domain

1

98

0.92

PF07476

MAAL_C

Methylaspartate ammonia-lyase C-terminus

173

293

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
3q45-assembly3.cif.gz_C crystal structure of dipeptide epimerase from cytophaga hutchinsonii complexed with mg and dipeptide d-ala-l-val 0.9811 7 370
3q45-assembly3.cif.gz_C crystal structure of dipeptide epimerase from cytophaga hutchinsonii complexed with mg and dipeptide d-ala-l-val 0.9679 7 370
2p88-assembly1.cif.gz_D crystal structure of n-succinyl arg/lys racemase from bacillus cereus atcc 14579 0.9617 7 370
3jva-assembly1.cif.gz_G crystal structure of dipeptide epimerase from enterococcus faecalis v583 0.9525 7 355
3ik4-assembly5.cif.gz_B crystal structure of mandelate racemase/muconate lactonizing protein from herpetosiphon aurantiacus 0.9489 3 358
ID Description Score Start End Superfamily
3q45B01 Alpha Beta;2-Layer Sandwich;Enolase-like; domain 1;Enolase-like, N-terminal domain 0.9826 7 118 3.30.390.10
3q45A02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Enolase-like C-terminal domain 0.9693 119 359 3.20.20.120
3q45A02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Enolase-like C-terminal domain 0.9615 119 359 3.20.20.120
2p88A01 Alpha Beta;2-Layer Sandwich;Enolase-like; domain 1;Enolase-like, N-terminal domain 0.9569 7 117 3.30.390.10
2p88C02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Enolase-like C-terminal domain 0.9467 120 354 3.20.20.120
ID Description Score Start End GO Terms
AF-A0A4Q3AYU9-F1-model_v4 deleted 0.9953 7 324
AF-A0A4Q3RYJ6-F1-model_v4 Dipeptide epimerase (EC 5.1.1.-) 0.9924 94 370 GO:0000287
GO:0016855
AF-A0A4V1UPU4-F1-model_v4 Dipeptide epimerase 0.9916 7 142
AF-A0A4Q3P4V7-F1-model_v4 deleted 0.9889 7 309
AF-A0A4Q5YAY7-F1-model_v4 deleted 0.9877 5 255

Feature Viewer

pLDDT pTM Quality
94.47 0.92 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map