F329749

General Info

Members Datasets Scaffolds Average Seq Length
218 150 436 729

Family's Representative Sequence

Representative Sequence 3300005841|Ga0068863_100062636|Ga0068863_1000626361
Length 753
Sequence MSAFVFIDNLVTGVRTARGARAWIFALLALLGTNVAFAQATNSIDSMTVSKGSSGRTIVKFVLKNAPANPPAGFAIATPPRIALDFLDTSNGLGATQRMVEDVALRSVNVIQAGSRTRVVFNLNRPQTFETQVEGNTVLVTLIDQGDQLDAKQQTIQRFAESRSGDMQHALRDVDFRRGPNGEGRIVIDLSDAAAGIDIRQQGRALIVDFVQTSLPKNLERRLDVQDFGTPIVTIDTFAQGPNTRMIVEPKGLWEHSAYQTDNRFILEIKPIVEDPNKLVQGTRQGYKGDKLSLNFQNVEVRAVLQVIADFTGLNIITSDSVSGSLTLRLKDIPWDQALDIIMQTKGLDMRKNGNVVLIAPREELALKEKQQLEAQKDISELEPLVSESFQLNYIKAQDLLNLITTNRQQQFGAGAGQTATTGGQGSFISKRGVAMVDPRSNILFVQDIPSNLDEIRKIIRQIDTAIRQVVIEARIVIASDKFGRQLGVRFGAQTGFRINNKYAVGQGGSLSTQPVVTTVGGTGTVTRETRTQTPYELASGITYAGYSDSPQLNVNLPVLNAAGSLALTLINLGSGNLINLELSALESDNRGKVVSSPRVVTGDNQKAHIEQGTEIPYVTPGSANNPATVQFKKAVLSLSVTPQITPDNRIIMTVEVRKDSVGQLVNLGGGFQVPSIDTRNVTTQISVNNGDTAVIGGIYEETVNNTVDKVPFLGDVPILGYLFKTTSRTSEKQELLIFLTPRVIKESINAIK

Samples

Sample ID Description Type Environment
1 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
34 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
37 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
38 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
41 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
42 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
45 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
51 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
52 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
53 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
54 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
55 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
56 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
57 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
58 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
59 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
60 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
61 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
62 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027462 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
94 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
95 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
96 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
99 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
100 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
101 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
102 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
103 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
104 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
105 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
106 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
107 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
108 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
109 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
110 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
111 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
112 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
113 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
114 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
115 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
116 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
117 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
118 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
119 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
120 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
121 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
122 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
123 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
124 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
125 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
126 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
127 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
128 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
129 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
130 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
132 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
133 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
134 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
135 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
136 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
137 3300049778 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control Metagenome Rhizosphere
138 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
139 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
140 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
141 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
142 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
143 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
144 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
145 2526164512 Azovibrio restrictus DSM 23866 Isolate Unclassified
146 2547132103 Chromobacterium sp. C-61 Isolate Rhizosphere
147 2574179768 Azoarcus communis DSM 12120 Isolate Unclassified
148 2843690924 Chromobacterium rhizoryzae JP2-74 Isolate Rhizosphere
149 2846033681 Chromobacterium sinusclupearum MWU13-2610 Isolate Rhizosphere
150 2998344455 Vogesella urethralis SLBN-145 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.25
Metatranscriptomes 0
Isolates 2.75

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.38
Nodule 0
Rhizoplane 1.38
Rhizosphere 95.41
Stem 0
Stem Tuber 0
Unclassified 0.46

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068863_100062636 3300005841 Bacteria 3518
2 Ga0070658_10018825 3300005327 Bacteria 5532
3 Ga0070676_10001091 3300005328 Bacteria 13551
4 Ga0070670_100000681 3300005331 Bacteria 26400
5 Ga0070677_10001848 3300005333 Bacteria 6692
6 Ga0068869_100039095 3300005334 Bacteria 3385
7 Ga0070666_10004090 3300005335 Bacteria 8860
8 Ga0070680_100006798 3300005336 Bacteria 8715
9 Ga0068868_100009375 3300005338 Bacteria 7038
10 Ga0070660_100033066 3300005339 Bacteria 3896
11 Ga0070689_100019704 3300005340 Bacteria 4990
12 Ga0070668_100001133 3300005347 Bacteria 18723
13 Ga0070675_100000235 3300005354 Bacteria 35666
14 Ga0070675_100014771 3300005354 Bacteria 6162
15 Ga0070671_100002423 3300005355 Bacteria 14419
16 Ga0070671_100003028 3300005355 Bacteria 13082
17 Ga0070674_100041387 3300005356 Bacteria 3122
18 Ga0070659_100067532 3300005366 Bacteria 2836
19 Ga0070667_100002692 3300005367 Bacteria 15384
20 Ga0070663_100009073 3300005455 Bacteria 6145
21 Ga0070663_100043503 3300005455 Bacteria 3161
22 Ga0070678_100001357 3300005456 Bacteria 12997
23 Ga0070678_100029778 3300005456 Bacteria 3743
24 Ga0070662_100001027 3300005457 Bacteria 17072
25 Ga0070681_10009886 3300005458 Bacteria 9399
26 Ga0070681_10011444 3300005458 Bacteria 8781
27 Ga0068867_100014435 3300005459 Bacteria 5598
28 Ga0070685_10005737 3300005466 Bacteria 6306
29 Ga0070699_100021302 3300005518 Bacteria 5590
30 Ga0070679_100041853 3300005530 Bacteria 4560
31 Ga0070679_100092282 3300005530 Bacteria 3016
32 Ga0070684_100002389 3300005535 Bacteria 13833
33 Ga0068853_100007716 3300005539 Bacteria 8629
34 Ga0068853_100050045 3300005539 Bacteria 3594
35 Ga0070672_100002040 3300005543 Bacteria 12716
36 Ga0070672_100016182 3300005543 Bacteria 5335
37 Ga0070672_100065721 3300005543 Bacteria 2870
38 Ga0070696_100006717 3300005546 Bacteria 7685
39 Ga0070696_100008118 3300005546 Bacteria 7019
40 Ga0070665_100004180 3300005548 Bacteria 15182
41 Ga0070665_100008824 3300005548 Bacteria 10207
42 Ga0068855_100007599 3300005563 Bacteria 13117
43 Ga0068855_100017306 3300005563 Bacteria 8674
44 Ga0070664_100002891 3300005564 Bacteria 13902
45 Ga0068854_100001870 3300005578 Bacteria 12831
46 Ga0068856_100003250 3300005614 Bacteria 16544
47 Ga0068852_100000366 3300005616 Bacteria 30499
48 Ga0068852_100052472 3300005616 Bacteria 3504
49 Ga0068864_100009761 3300005618 Bacteria 7916
50 Ga0068864_100017102 3300005618 Bacteria 6046
51 Ga0068864_100024789 3300005618 Bacteria 5046
52 Ga0068851_10000790 3300005834 Bacteria 13643
53 Ga0068851_10001231 3300005834 Bacteria 11115
54 Ga0068870_10003446 3300005840 Bacteria 6705
55 Ga0068863_100000812 3300005841 Bacteria 31340
56 Ga0068860_100010032 3300005843 Bacteria 9389
57 Ga0068862_100020573 3300005844 Bacteria 5513
58 Ga0075366_10025868 3300006195 Bacteria 3433
59 Ga0097621_100006481 3300006237 Bacteria 8313
60 Ga0097621_100014673 3300006237 Bacteria 5870
61 Ga0075428_100000967 3300006844 Bacteria 30387
62 Ga0075429_100001333 3300006880 Bacteria 20157
63 Ga0075436_100014310 3300006914 Bacteria 5431
64 Ga0105240_10020752 3300009093 Bacteria 8752
65 Ga0105240_10058925 3300009093 Bacteria 4793
66 Ga0105240_10112858 3300009093 Bacteria 3285
67 Ga0111539_10001305 3300009094 Bacteria 33287
68 Ga0105241_10014604 3300009174 Bacteria 5751
69 Ga0105248_10007755 3300009177 Bacteria 11784
70 Ga0105237_10023522 3300009545 Bacteria 6312
71 Ga0105237_10108590 3300009545 Bacteria 2766
72 Ga0157373_10001349 3300013100 Bacteria 18818
73 Ga0157373_10007469 3300013100 Bacteria 8132
74 Ga0157371_10000787 3300013102 Bacteria 36521
75 Ga0157370_10015909 3300013104 Bacteria 7632
76 Ga0157370_10018980 3300013104 Bacteria 6913
77 Ga0157370_10049251 3300013104 Bacteria 4033
78 Ga0157370_10052251 3300013104 Bacteria 3901
79 Ga0157369_10035873 3300013105 Bacteria 5436
80 Ga0157374_10000127 3300013296 Bacteria 69890
81 Ga0157374_10032835 3300013296 Bacteria 4730
82 Ga0157378_10019252 3300013297 Bacteria 5999
83 Ga0163162_10066262 3300013306 Bacteria 3660
84 Ga0163162_10076330 3300013306 Bacteria 3413
85 Ga0157372_10000909 3300013307 Bacteria 32178
86 Ga0163163_10056896 3300014325 Bacteria 3866
87 Ga0157380_10057630 3300014326 Bacteria 3094
88 Ga0157379_10002711 3300014968 Bacteria 14939
89 Ga0207697_10009012 3300025315 Bacteria 4328
90 Ga0207656_10000272 3300025321 Bacteria 17950
91 Ga0207656_10000855 3300025321 Bacteria 9949
92 Ga0207682_10002076 3300025893 Bacteria 9076
93 Ga0207645_10000045 3300025907 Bacteria 85310
94 Ga0207643_10001998 3300025908 Bacteria 11251
95 Ga0207643_10007276 3300025908 Bacteria 5939
96 Ga0207705_10008806 3300025909 Bacteria 7356
97 Ga0207705_10011261 3300025909 Bacteria 6482
98 Ga0207705_10023458 3300025909 Bacteria 4401
99 Ga0207705_10029162 3300025909 Bacteria 3934
100 Ga0207707_10002828 3300025912 Bacteria 15472
101 Ga0207707_10024200 3300025912 Bacteria 5312
102 Ga0207695_10014087 3300025913 Bacteria 9495
103 Ga0207695_10027175 3300025913 Bacteria 6375
104 Ga0207657_10000258 3300025919 Bacteria 56256
105 Ga0207657_10006960 3300025919 Bacteria 11648
106 Ga0207657_10041563 3300025919 Bacteria 4065
107 Ga0207694_10005206 3300025924 Bacteria 10044
108 Ga0207650_10001339 3300025925 Bacteria 17801
109 Ga0207659_10001999 3300025926 Bacteria 12077
110 Ga0207659_10056124 3300025926 Bacteria 2820
111 Ga0207664_10011535 3300025929 Bacteria 6289
112 Ga0207690_10033598 3300025932 Bacteria 3299
113 Ga0207706_10000023 3300025933 Bacteria 153979
114 Ga0207691_10000279 3300025940 Bacteria 50526
115 Ga0207691_10067547 3300025940 Bacteria 3232
116 Ga0207667_10002136 3300025949 Bacteria 24781
117 Ga0207667_10003036 3300025949 Bacteria 20829
118 Ga0207667_10026953 3300025949 Bacteria 6269
119 Ga0207667_10048397 3300025949 Bacteria 4496
120 Ga0207668_10024459 3300025972 Bacteria 3898
121 Ga0207640_10009098 3300025981 Bacteria 5547
122 Ga0207658_10016772 3300025986 Bacteria 5040
123 Ga0207658_10066803 3300025986 Bacteria 2706
124 Ga0207677_10005410 3300026023 Bacteria 6931
125 Ga0207639_10005832 3300026041 Bacteria 8344
126 Ga0207678_10002978 3300026067 Bacteria 15324
127 Ga0207678_10005112 3300026067 Bacteria 11768
128 Ga0207678_10044461 3300026067 Bacteria 3842
129 Ga0207708_10052456 3300026075 Bacteria 3106
130 Ga0207702_10000523 3300026078 Bacteria 43069
131 Ga0207702_10011283 3300026078 Bacteria 7447
132 Ga0207702_10015014 3300026078 Bacteria 6423
133 Ga0207648_10001435 3300026089 Bacteria 26241
134 Ga0207648_10011086 3300026089 Bacteria 8506
135 Ga0207676_10000557 3300026095 Bacteria 30907
136 Ga0207676_10037834 3300026095 Bacteria 3680
137 Ga0207674_10000429 3300026116 Bacteria 54858
138 Ga0207683_10000003 3300026121 Bacteria 191866
139 Ga0207683_10000836 3300026121 Bacteria 28168
140 Ga0207698_10001079 3300026142 Bacteria 15860
141 Ga0207698_10001159 3300026142 Bacteria 15352
142 Ga0207698_10040629 3300026142 Bacteria 3459
143 Ga0210000_1002468 3300027462 Bacteria 2633
144 Ga0209971_1000585 3300027682 Bacteria 9482
145 Ga0209974_10000642 3300027876 Bacteria 11791
146 Ga0207428_10002784 3300027907 Bacteria 17363
147 Ga0268265_10051455 3300028380 Bacteria 3109
148 Ga0268264_10019901 3300028381 Bacteria 5484
149 Ga0268264_10030856 3300028381 Bacteria 4394
150 Ga0265323_10005124 3300028653 Bacteria 5584
151 Ga0265328_10000016 3300031239 Bacteria 132959
152 Ga0265328_10000643 3300031239 Bacteria 16174
153 Ga0265331_10000144 3300031250 Bacteria 92791
154 Ga0265331_10006920 3300031250 Bacteria 6624
155 Ga0265327_10000314 3300031251 Bacteria 92783
156 Ga0265327_10011509 3300031251 Bacteria 6079
157 Ga0307408_100000795 3300031548 Bacteria 25277
158 Ga0307408_100002636 3300031548 Bacteria 12470
159 Ga0307408_100058335 3300031548 Bacteria 2806
160 Ga0307508_10078012 3300031616 Bacteria 2892
161 Ga0307516_10085928 3300031730 Unclassified 2983
162 Ga0307405_10002632 3300031731 Bacteria 7984
163 Ga0307413_10000935 3300031824 Bacteria 10416
164 Ga0307410_10012181 3300031852 Bacteria 4958
165 Ga0307410_10050508 3300031852 Bacteria 2797
166 Ga0307406_10012387 3300031901 Bacteria 4864
167 Ga0307407_10011703 3300031903 Bacteria 4189
168 Ga0307412_10001020 3300031911 Bacteria 16024
169 Ga0307409_100000380 3300031995 Bacteria 18816
170 Ga0307409_100008235 3300031995 Bacteria 6311
171 Ga0307411_10000093 3300032005 Bacteria 27213
172 Ga0307411_10000235 3300032005 Bacteria 18066
173 Ga0307415_100004391 3300032126 Bacteria 7309
174 Ga0373952_0000434 3300035092 Bacteria 7231
175 Ga0373924_0005423 3300035410 Bacteria 4514
176 Ga0373925_0010370 3300037068 Bacteria 6761
177 Ga0395900_0000183 3300037418 Bacteria 100749
178 Ga0395900_0047854 3300037418 Bacteria 4405
179 Ga0395898_0002759 3300037466 Bacteria 20231
180 Ga0395905_0014429 3300037471 Bacteria 7543
181 Ga0451577_0035085 3300042876 Bacteria 4519
182 Ga0466969_0000046 3300044656 Bacteria 63999
183 Ga0466963_0035938 3300044694 Bacteria 3229
184 Ga0453684_0000826 3300044712 Bacteria 104663
185 Ga0453684_0002735 3300044712 Bacteria 41744
186 Ga0453684_0006614 3300044712 Bacteria 21910
187 Ga0453684_0008033 3300044712 Bacteria 19093
188 Ga0466957_0015469 3300044842 Bacteria 4456
189 Ga0451576_0002078 3300045051 Bacteria 31306
190 Ga0451576_0008824 3300045051 Bacteria 11780
191 Ga0466958_0004234 3300045836 Bacteria 7545
192 Ga0496102_0017542 3300048905 Bacteria 6270
193 Ga0496104_0010248 3300048907 Bacteria 8370
194 Ga0496106_0002076 3300048909 Bacteria 15006
195 Ga0501047_0034965 3300049581 Bacteria 4852
196 Ga0501069_0011737 3300049585 Bacteria 4645
197 Ga0501073_0000119 3300049589 Bacteria 50663
198 Ga0501073_0006805 3300049589 Bacteria 8500
199 Ga0501074_0000634 3300049590 Bacteria 21786
200 Ga0501080_0002188 3300049742 Bacteria 16986
201 Ga0501080_0012490 3300049742 Bacteria 7788
202 Ga0501080_0013165 3300049742 Bacteria 7599
203 Ga0501083_0000505 3300049744 Bacteria 24911
204 Ga0501280_000391 3300049776 Bacteria 10666
205 Ga0501282_000500 3300049778 Bacteria 4635
206 nmdc:mga00v17_16420_c1 3300050491 Bacteria 4173
207 nmdc:mga09592_14899_c1 3300050508 Bacteria 6350
208 nmdc:mga08y16_40796_c1 3300050511 Bacteria 4864
209 nmdc:mga08x19_412_c1 3300050514 Bacteria 29897
210 Ga0495619_0032003 3300053085 Bacteria 3411
211 Ga0500622_0000011 3300053156 Bacteria 386096
212 Ga0501082_0023922 3300060353 Bacteria 5268
213 2526212511 2526164512 Bacteria 4025691
214 2547373149 2547132103 Bacteria 5115736
215 2574432321 2574179768 Bacteria 4907129
216 2843694997 2843690924 Bacteria 5169057
217 2846037368 2846033681 Bacteria 4377894
218 2998345538 2998344455 Bacteria 4222996
219 Ga0068863_100062636
220 Ga0070658_10018825
221 Ga0070676_10001091
222 Ga0070670_100000681
223 Ga0070677_10001848
224 Ga0068869_100039095
225 Ga0070666_10004090
226 Ga0070680_100006798
227 Ga0068868_100009375
228 Ga0070660_100033066
229 Ga0070689_100019704
230 Ga0070668_100001133
231 Ga0070675_100000235
232 Ga0070675_100014771
233 Ga0070671_100002423
234 Ga0070671_100003028
235 Ga0070674_100041387
236 Ga0070659_100067532
237 Ga0070667_100002692
238 Ga0070663_100009073
239 Ga0070663_100043503
240 Ga0070678_100001357
241 Ga0070678_100029778
242 Ga0070662_100001027
243 Ga0070681_10009886
244 Ga0070681_10011444
245 Ga0068867_100014435
246 Ga0070685_10005737
247 Ga0070699_100021302
248 Ga0070679_100041853
249 Ga0070679_100092282
250 Ga0070684_100002389
251 Ga0068853_100007716
252 Ga0068853_100050045
253 Ga0070672_100002040
254 Ga0070672_100016182
255 Ga0070672_100065721
256 Ga0070696_100006717
257 Ga0070696_100008118
258 Ga0070665_100004180
259 Ga0070665_100008824
260 Ga0068855_100007599
261 Ga0068855_100017306
262 Ga0070664_100002891
263 Ga0068854_100001870
264 Ga0068856_100003250
265 Ga0068852_100000366
266 Ga0068852_100052472
267 Ga0068864_100009761
268 Ga0068864_100017102
269 Ga0068864_100024789
270 Ga0068851_10000790
271 Ga0068851_10001231
272 Ga0068870_10003446
273 Ga0068863_100000812
274 Ga0068860_100010032
275 Ga0068862_100020573
276 Ga0075366_10025868
277 Ga0097621_100006481
278 Ga0097621_100014673
279 Ga0075428_100000967
280 Ga0075429_100001333
281 Ga0075436_100014310
282 Ga0105240_10020752
283 Ga0105240_10058925
284 Ga0105240_10112858
285 Ga0111539_10001305
286 Ga0105241_10014604
287 Ga0105248_10007755
288 Ga0105237_10023522
289 Ga0105237_10108590
290 Ga0157373_10001349
291 Ga0157373_10007469
292 Ga0157371_10000787
293 Ga0157370_10015909
294 Ga0157370_10018980
295 Ga0157370_10049251
296 Ga0157370_10052251
297 Ga0157369_10035873
298 Ga0157374_10000127
299 Ga0157374_10032835
300 Ga0157378_10019252
301 Ga0163162_10066262
302 Ga0163162_10076330
303 Ga0157372_10000909
304 Ga0163163_10056896
305 Ga0157380_10057630
306 Ga0157379_10002711
307 Ga0207697_10009012
308 Ga0207656_10000272
309 Ga0207656_10000855
310 Ga0207682_10002076
311 Ga0207645_10000045
312 Ga0207643_10001998
313 Ga0207643_10007276
314 Ga0207705_10008806
315 Ga0207705_10011261
316 Ga0207705_10023458
317 Ga0207705_10029162
318 Ga0207707_10002828
319 Ga0207707_10024200
320 Ga0207695_10014087
321 Ga0207695_10027175
322 Ga0207657_10000258
323 Ga0207657_10006960
324 Ga0207657_10041563
325 Ga0207694_10005206
326 Ga0207650_10001339
327 Ga0207659_10001999
328 Ga0207659_10056124
329 Ga0207664_10011535
330 Ga0207690_10033598
331 Ga0207706_10000023
332 Ga0207691_10000279
333 Ga0207691_10067547
334 Ga0207667_10002136
335 Ga0207667_10003036
336 Ga0207667_10026953
337 Ga0207667_10048397
338 Ga0207668_10024459
339 Ga0207640_10009098
340 Ga0207658_10016772
341 Ga0207658_10066803
342 Ga0207677_10005410
343 Ga0207639_10005832
344 Ga0207678_10002978
345 Ga0207678_10005112
346 Ga0207678_10044461
347 Ga0207708_10052456
348 Ga0207702_10000523
349 Ga0207702_10011283
350 Ga0207702_10015014
351 Ga0207648_10001435
352 Ga0207648_10011086
353 Ga0207676_10000557
354 Ga0207676_10037834
355 Ga0207674_10000429
356 Ga0207683_10000003
357 Ga0207683_10000836
358 Ga0207698_10001079
359 Ga0207698_10001159
360 Ga0207698_10040629
361 Ga0210000_1002468
362 Ga0209971_1000585
363 Ga0209974_10000642
364 Ga0207428_10002784
365 Ga0268265_10051455
366 Ga0268264_10019901
367 Ga0268264_10030856
368 Ga0265323_10005124
369 Ga0265328_10000016
370 Ga0265328_10000643
371 Ga0265331_10000144
372 Ga0265331_10006920
373 Ga0265327_10000314
374 Ga0265327_10011509
375 Ga0307408_100000795
376 Ga0307408_100002636
377 Ga0307408_100058335
378 Ga0307508_10078012
379 Ga0307516_10085928
380 Ga0307405_10002632
381 Ga0307413_10000935
382 Ga0307410_10012181
383 Ga0307410_10050508
384 Ga0307406_10012387
385 Ga0307407_10011703
386 Ga0307412_10001020
387 Ga0307409_100000380
388 Ga0307409_100008235
389 Ga0307411_10000093
390 Ga0307411_10000235
391 Ga0307415_100004391
392 Ga0373952_0000434
393 Ga0373924_0005423
394 Ga0373925_0010370
395 Ga0395900_0000183
396 Ga0395900_0047854
397 Ga0395898_0002759
398 Ga0395905_0014429
399 Ga0451577_0035085
400 Ga0466969_0000046
401 Ga0466963_0035938
402 Ga0453684_0000826
403 Ga0453684_0002735
404 Ga0453684_0006614
405 Ga0453684_0008033
406 Ga0466957_0015469
407 Ga0451576_0002078
408 Ga0451576_0008824
409 Ga0466958_0004234
410 Ga0496102_0017542
411 Ga0496104_0010248
412 Ga0496106_0002076
413 Ga0501047_0034965
414 Ga0501069_0011737
415 Ga0501073_0000119
416 Ga0501073_0006805
417 Ga0501074_0000634
418 Ga0501080_0002188
419 Ga0501080_0012490
420 Ga0501080_0013165
421 Ga0501083_0000505
422 Ga0501280_000391
423 Ga0501282_000500
424 nmdc:mga00v17_16420_c1
425 nmdc:mga09592_14899_c1
426 nmdc:mga08y16_40796_c1
427 nmdc:mga08x19_412_c1
428 Ga0495619_0032003
429 Ga0500622_0000011
430 Ga0501082_0023922
431 2526212511
432 2547373149
433 2574432321
434 2843694997
435 2846037368
436 2998345538

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF11741

AMIN

AMIN domain

173

276

0.98

PF03958

Secretin_N

Bacterial type II/III secretion system short domain

387

469

0.97

PF00263

Secretin

Bacterial type II and III secretion system protein

585

746

0.94

PF11741

AMIN

AMIN domain

48

142

0.89

Map