F329466

General Info

Members Datasets Scaffolds Average Seq Length
218 133 436 248

Family's Representative Sequence

Representative Sequence 3300003373|JGI25407J50210_10000607|JGI25407J50210_100006078
Length 265
Sequence MPIGKSGDPVTHISQAYPDRVEVRGRDLAGDLMGRLSFTEYFHLLLTGREPTEDQRFFLDLLLVAIAEHGMMPTNVAARMTLAADPGSLQGAVAAGILGCGPVILGTSEECARLLEDAQERVAAGGEPAEVASNAVRAIRASGGRVPGFGHPVHRPDDPRAERILELADARGTSGPHVVLARQVRHAVAEAWGRPLTMNVSMPIAAVMLDLGFSSATVKSVPILARTASLLAHLAEEQQLPVGFRMADRAEEAVRYERQPEDEVR

Samples

Sample ID Description Type Environment
1 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
6 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
7 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
8 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
9 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
10 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
11 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
12 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
13 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
14 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
15 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
16 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
17 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
18 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
19 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
20 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
21 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
22 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
23 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
25 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
26 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
27 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
28 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
29 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
30 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
31 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
32 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
44 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
45 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
46 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
47 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
48 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
49 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
50 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
51 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
52 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
53 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
54 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
55 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
56 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
57 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
58 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
59 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
60 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
61 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
62 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
63 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
64 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
65 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
66 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
67 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
68 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
69 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
70 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
71 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
72 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
73 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
74 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
75 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
76 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
77 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
78 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
79 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
80 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
81 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
82 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
83 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
84 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
85 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
86 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
87 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
88 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
89 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
90 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
91 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
92 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
93 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
94 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
95 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
96 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
97 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
98 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
99 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
100 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
101 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
102 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
103 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
104 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
105 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
112 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
113 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
114 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
115 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
116 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
117 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
118 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
119 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
120 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
123 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
124 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
125 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
126 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
127 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
128 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
129 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
130 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
131 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
132 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
133 2996336353 Mesorhizobium sp. YM1C-6-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.54
Metatranscriptomes 0
Isolates 0.46

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.46
Nodule 0
Rhizoplane 16.06
Rhizosphere 83.03
Stem 0
Stem Tuber 0
Unclassified 3.21

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25407J50210_10000607 3300003373 Bacteria 7326
2 JGI25407J50210_10006552 3300003373 Bacteria 2903
3 Ga0070683_100007571 3300005329 Bacteria 9181
4 Ga0070683_100052098 3300005329 Bacteria 3791
5 Ga0070683_100103625 3300005329 Bacteria 2681
6 Ga0070683_100126466 3300005329 Bacteria 2416
7 Ga0070680_100415859 3300005336 Bacteria 1147
8 Ga0068868_100045120 3300005338 Bacteria 3448
9 Ga0070679_100568103 3300005530 Bacteria 1078
10 Ga0070684_100013027 3300005535 Bacteria 6690
11 Ga0070684_100026354 3300005535 Bacteria 4896
12 Ga0070684_100044267 3300005535 Bacteria 3849
13 Ga0070695_100263014 3300005545 Bacteria 1261
14 Ga0070695_100560041 3300005545 Bacteria 892
15 Ga0068857_100050041 3300005577 Bacteria 3707
16 Ga0070702_100235855 3300005615 Bacteria 1232
17 Ga0068852_100557260 3300005616 Bacteria 1147
18 Ga0081455_10000836 3300005937 Bacteria 39643
19 Ga0081455_10206746 3300005937 Bacteria 1466
20 Ga0081538_10000027 3300005981 Bacteria 125924
21 Ga0081538_10000205 3300005981 Bacteria 65480
22 Ga0081538_10008535 3300005981 Bacteria 8679
23 Ga0081538_10091490 3300005981 Bacteria 1570
24 Ga0081538_10109604 3300005981 Bacteria 1359
25 Ga0081540_1002691 3300005983 Bacteria 14453
26 Ga0075432_10023987 3300006058 Bacteria 2089
27 Ga0070715_10018404 3300006163 Bacteria 2661
28 Ga0075362_10006955 3300006177 Bacteria 4247
29 Ga0075428_100028301 3300006844 Bacteria 6198
30 Ga0075428_100032996 3300006844 Bacteria 5716
31 Ga0075430_100002129 3300006846 Bacteria 16386
32 Ga0075431_100017684 3300006847 Bacteria 7248
33 Ga0075431_100021201 3300006847 Bacteria 6640
34 Ga0075429_100052604 3300006880 Bacteria 3544
35 Ga0075436_100030933 3300006914 Bacteria 3684
36 Ga0075435_100036848 3300007076 Bacteria 3890
37 Ga0111539_10040077 3300009094 Bacteria 5641
38 Ga0111539_10075870 3300009094 Bacteria 3960
39 Ga0105245_10101833 3300009098 Bacteria 2659
40 Ga0105245_10643779 3300009098 Bacteria 1090
41 Ga0105248_11080309 3300009177 Bacteria 907
42 Ga0105249_10139686 3300009553 Bacteria 2321
43 Ga0105239_10005700 3300010375 Bacteria 14541
44 Ga0105239_10123694 3300010375 Bacteria 2874
45 Ga0157373_10520060 3300013100 Bacteria 861
46 Ga0157369_10010873 3300013105 Bacteria 10366
47 Ga0157375_10404524 3300013308 Bacteria 1532
48 Ga0157377_10408321 3300014745 Bacteria 927
49 Ga0207642_10063359 3300025899 Bacteria 1729
50 Ga0207685_10034438 3300025905 Bacteria 1840
51 Ga0207693_10438809 3300025915 Bacteria 1021
52 Ga0207663_10202457 3300025916 Bacteria 1433
53 Ga0207690_10224989 3300025932 Bacteria 1437
54 Ga0207706_10057238 3300025933 Bacteria 3435
55 Ga0207706_10070682 3300025933 Bacteria 3070
56 Ga0207661_10026278 3300025944 Bacteria 4434
57 Ga0207661_10109223 3300025944 Bacteria 2336
58 Ga0207677_10168640 3300026023 Bacteria 1709
59 Ga0207674_10002220 3300026116 Bacteria 24587
60 Ga0207674_10009746 3300026116 Bacteria 10943
61 Ga0207675_100789518 3300026118 Bacteria 962
62 Ga0207698_10113646 3300026142 Bacteria 2275
63 Ga0207698_10228947 3300026142 Bacteria 1686
64 Ga0207428_10027510 3300027907 Bacteria 4734
65 Ga0207428_10050926 3300027907 Bacteria 3310
66 Ga0265338_10010165 3300028800 Bacteria 11096
67 Ga0265327_10002180 3300031251 Bacteria 21507
68 Ga0307410_10377227 3300031852 Bacteria 1140
69 Ga0307406_10175783 3300031901 Bacteria 1554
70 Ga0307406_10218380 3300031901 Bacteria 1415
71 Ga0307407_10083598 3300031903 Bacteria 1937
72 Ga0307409_100120194 3300031995 Bacteria 2223
73 Ga0307416_100009367 3300032002 Bacteria 6404
74 Ga0307416_100254456 3300032002 Bacteria 1712
75 Ga0307416_100300217 3300032002 Bacteria 1596
76 Ga0307416_100619835 3300032002 Bacteria 1164
77 Ga0307415_100545855 3300032126 Bacteria 1022
78 Ga0373955_0068658 3300035172 Bacteria 1976
79 Ga0316574_0053029 3300035398 Bacteria 2531
80 Ga0373924_0101550 3300035410 Bacteria 1238
81 Ga0373937_0104443 3300036401 Bacteria 2632
82 Ga0395899_0030130 3300037312 Bacteria 4082
83 Ga0395899_0075409 3300037312 Bacteria 2463
84 Ga0395900_0012447 3300037418 Bacteria 8700
85 Ga0395900_0221776 3300037418 Bacteria 1905
86 Ga0395900_0326619 3300037418 Bacteria 1513
87 Ga0395898_0051559 3300037466 Bacteria 4023
88 Ga0395898_0063101 3300037466 Bacteria 3596
89 Ga0395898_0209355 3300037466 Bacteria 1860
90 Ga0395898_0402914 3300037466 Bacteria 1304
91 Ga0395905_0044574 3300037471 Bacteria 4163
92 Ga0395905_0051298 3300037471 Bacteria 3864
93 Ga0395905_0075682 3300037471 Bacteria 3155
94 Ga0395905_0085267 3300037471 Bacteria 2960
95 Ga0395905_0282264 3300037471 Bacteria 1547
96 Ga0395901_0041285 3300038443 Bacteria 4780
97 Ga0395901_0079699 3300038443 Bacteria 3419
98 Ga0395901_0422125 3300038443 Bacteria 1367
99 Ga0395901_0653392 3300038443 Bacteria 1054
100 Ga0395901_0894006 3300038443 Unclassified 870
101 Ga0439448_0101248 3300042005 Unclassified 979
102 Ga0466961_0030784 3300044693 Bacteria 3448
103 Ga0466963_0028536 3300044694 Bacteria 3584
104 Ga0466963_0044521 3300044694 Bacteria 2922
105 Ga0466963_0158030 3300044694 Bacteria 1577
106 Ga0466963_0159839 3300044694 Bacteria 1568
107 Ga0466963_0474856 3300044694 Bacteria 883
108 Ga0466971_0105542 3300044719 Bacteria 1297
109 Ga0466970_0147145 3300044765 Bacteria 1300
110 Ga0466957_0023221 3300044842 Bacteria 3665
111 Ga0466959_0045056 3300045049 Bacteria 3249
112 Ga0466958_0013310 3300045836 Bacteria 4681
113 Ga0466958_0032895 3300045836 Bacteria 3087
114 Ga0466958_0176442 3300045836 Bacteria 1355
115 Ga0466967_0014989 3300045976 Bacteria 6062
116 Ga0466967_0036791 3300045976 Bacteria 4182
117 Ga0495592_0047804 3300046454 Bacteria 3186
118 Ga0495629_0230397 3300046459 Bacteria 1277
119 Ga0495582_0069999 3300046473 Bacteria 1940
120 Ga0495594_0108184 3300046499 Bacteria 1567
121 Ga0495618_0386378 3300046514 Bacteria 858
122 Ga0495665_0057053 3300046531 Bacteria 2061
123 Ga0495586_0252961 3300046535 Bacteria 1005
124 Ga0495667_0020785 3300046559 Bacteria 4429
125 Ga0495667_0056648 3300046559 Bacteria 2577
126 Ga0495634_0051120 3300046642 Bacteria 2774
127 Ga0495634_0108365 3300046642 Bacteria 1788
128 Ga0495635_0151780 3300046663 Bacteria 1577
129 Ga0495659_0201398 3300046664 Unclassified 817
130 Ga0495657_0076699 3300046675 Bacteria 2170
131 Ga0495623_0035160 3300046679 Bacteria 3211
132 Ga0495658_0094264 3300046683 Bacteria 1778
133 Ga0495658_0171882 3300046683 Bacteria 1341
134 Ga0495613_0244117 3300046689 Bacteria 1255
135 Ga0495624_0092426 3300046690 Bacteria 1866
136 Ga0495600_0043359 3300046809 Bacteria 2934
137 Ga0495604_0035013 3300047317 Bacteria 3967
138 Ga0495676_0111334 3300047321 Bacteria 2008
139 Ga0495676_0199426 3300047321 Unclassified 1391
140 Ga0495684_0029032 3300047471 Bacteria 4245
141 Ga0496100_0002674 3300048903 Bacteria 9084
142 Ga0496100_0034494 3300048903 Bacteria 3176
143 Ga0496101_0132390 3300048904 Bacteria 1894
144 Ga0496102_0021939 3300048905 Bacteria 5654
145 Ga0496102_0864118 3300048905 Bacteria 827
146 Ga0496104_0144735 3300048907 Bacteria 2282
147 Ga0496105_0005123 3300048908 Bacteria 9936
148 Ga0496105_0246989 3300048908 Bacteria 1447
149 Ga0496106_0108988 3300048909 Bacteria 2154
150 Ga0496106_0130401 3300048909 Bacteria 1971
151 Ga0496106_0230184 3300048909 Bacteria 1480
152 Ga0496107_0004731 3300048910 Bacteria 9247
153 Ga0496107_0245130 3300048910 Bacteria 1333
154 Ga0496108_0014087 3300048911 Bacteria 6522
155 Ga0496108_0111082 3300048911 Bacteria 2344
156 Ga0496108_0195568 3300048911 Bacteria 1754
157 Ga0496108_0264793 3300048911 Bacteria 1496
158 Ga0496109_0016107 3300048912 Bacteria 6533
159 Ga0496109_0058368 3300048912 Bacteria 3524
160 Ga0496109_0156706 3300048912 Bacteria 2133
161 Ga0496109_0221913 3300048912 Bacteria 1777
162 Ga0496109_0241409 3300048912 Bacteria 1700
163 Ga0496109_0254050 3300048912 Bacteria 1655
164 Ga0496110_0018581 3300048913 Bacteria 5831
165 Ga0496110_0045522 3300048913 Bacteria 3836
166 Ga0496110_0057317 3300048913 Bacteria 3429
167 Ga0496110_0424732 3300048913 Bacteria 1212
168 Ga0496111_0059119 3300048914 Bacteria 2777
169 Ga0496111_0113646 3300048914 Bacteria 1995
170 Ga0496112_0033476 3300048915 Bacteria 4996
171 Ga0496112_0225717 3300048915 Bacteria 1828
172 Ga0496113_0304329 3300048916 Unclassified 1277
173 Ga0496114_0031169 3300048917 Bacteria 4386
174 Ga0496115_0008936 3300048918 Bacteria 7430
175 Ga0496115_0068150 3300048918 Bacteria 2880
176 Ga0501031_0095382 3300049568 Bacteria 1941
177 Ga0501037_0276698 3300049573 Bacteria 1170
178 Ga0501039_0350708 3300049575 Bacteria 1160
179 Ga0501040_0487949 3300049576 Unclassified 888
180 Ga0501041_0049998 3300049577 Bacteria 2547
181 Ga0501041_0245029 3300049577 Bacteria 1126
182 Ga0501047_0241162 3300049581 Bacteria 1658
183 Ga0501067_0086659 3300049583 Unclassified 1738
184 Ga0501069_0232367 3300049585 Bacteria 1074
185 Ga0501070_0011616 3300049586 Bacteria 7434
186 Ga0501070_0208035 3300049586 Bacteria 1606
187 Ga0501071_0013891 3300049587 Bacteria 5498
188 Ga0501072_0117543 3300049588 Bacteria 2118
189 Ga0501075_0058649 3300049591 Bacteria 2899
190 Ga0501075_0092362 3300049591 Bacteria 2297
191 Ga0501075_0208209 3300049591 Bacteria 1492
192 Ga0501076_0017379 3300049592 Bacteria 5466
193 Ga0501076_0105470 3300049592 Bacteria 2275
194 Ga0501080_0060459 3300049742 Bacteria 3527
195 Ga0501081_0097585 3300049743 Bacteria 2074
196 Ga0501035_0036558 3300049822 Bacteria 4451
197 Ga0501035_0077885 3300049822 Bacteria 2929
198 Ga0501035_0742888 3300049822 Bacteria 788
199 Ga0501044_0027792 3300049823 Bacteria 5972
200 Ga0501045_0630408 3300049824 Bacteria 793
201 Ga0501045_0631845 3300049824 Bacteria 792
202 nmdc:mga05p37_190719_c1 3300050507 Bacteria 2489
203 nmdc:mga05p37_918119_c1 3300050507 Bacteria 941
204 nmdc:mga09592_51142_c1 3300050508 Bacteria 3485
205 nmdc:mga0qj67_164465_c1 3300050509 Bacteria 1801
206 nmdc:mga0qj67_3118_c1 3300050509 Bacteria 11928
207 nmdc:mga08y16_89014_c1 3300050511 Bacteria 3217
208 nmdc:mga0rr50_28077_c1 3300050513 Bacteria 3951
209 nmdc:mga08x19_7791_c1 3300050514 Bacteria 6362
210 Ga0495619_0026063 3300053085 Bacteria 3759
211 Ga0495619_0034440 3300053085 Bacteria 3292
212 Ga0501084_0171165 3300054114 Bacteria 1833
213 Ga0501082_0031387 3300060353 Bacteria 4581
214 Ga0501082_0113083 3300060353 Bacteria 2351
215 Ga0501082_0249760 3300060353 Bacteria 1544
216 Ga0466962_0031180 3300061719 Bacteria 2552
217 Ga0466962_0126897 3300061719 Bacteria 1232
218 2996338443 2996336353 Bacteria 5511628
219 JGI25407J50210_10000607
220 JGI25407J50210_10006552
221 Ga0070683_100007571
222 Ga0070683_100052098
223 Ga0070683_100103625
224 Ga0070683_100126466
225 Ga0070680_100415859
226 Ga0068868_100045120
227 Ga0070679_100568103
228 Ga0070684_100013027
229 Ga0070684_100026354
230 Ga0070684_100044267
231 Ga0070695_100263014
232 Ga0070695_100560041
233 Ga0068857_100050041
234 Ga0070702_100235855
235 Ga0068852_100557260
236 Ga0081455_10000836
237 Ga0081455_10206746
238 Ga0081538_10000027
239 Ga0081538_10000205
240 Ga0081538_10008535
241 Ga0081538_10091490
242 Ga0081538_10109604
243 Ga0081540_1002691
244 Ga0075432_10023987
245 Ga0070715_10018404
246 Ga0075362_10006955
247 Ga0075428_100028301
248 Ga0075428_100032996
249 Ga0075430_100002129
250 Ga0075431_100017684
251 Ga0075431_100021201
252 Ga0075429_100052604
253 Ga0075436_100030933
254 Ga0075435_100036848
255 Ga0111539_10040077
256 Ga0111539_10075870
257 Ga0105245_10101833
258 Ga0105245_10643779
259 Ga0105248_11080309
260 Ga0105249_10139686
261 Ga0105239_10005700
262 Ga0105239_10123694
263 Ga0157373_10520060
264 Ga0157369_10010873
265 Ga0157375_10404524
266 Ga0157377_10408321
267 Ga0207642_10063359
268 Ga0207685_10034438
269 Ga0207693_10438809
270 Ga0207663_10202457
271 Ga0207690_10224989
272 Ga0207706_10057238
273 Ga0207706_10070682
274 Ga0207661_10026278
275 Ga0207661_10109223
276 Ga0207677_10168640
277 Ga0207674_10002220
278 Ga0207674_10009746
279 Ga0207675_100789518
280 Ga0207698_10113646
281 Ga0207698_10228947
282 Ga0207428_10027510
283 Ga0207428_10050926
284 Ga0265338_10010165
285 Ga0265327_10002180
286 Ga0307410_10377227
287 Ga0307406_10175783
288 Ga0307406_10218380
289 Ga0307407_10083598
290 Ga0307409_100120194
291 Ga0307416_100009367
292 Ga0307416_100254456
293 Ga0307416_100300217
294 Ga0307416_100619835
295 Ga0307415_100545855
296 Ga0373955_0068658
297 Ga0316574_0053029
298 Ga0373924_0101550
299 Ga0373937_0104443
300 Ga0395899_0030130
301 Ga0395899_0075409
302 Ga0395900_0012447
303 Ga0395900_0221776
304 Ga0395900_0326619
305 Ga0395898_0051559
306 Ga0395898_0063101
307 Ga0395898_0209355
308 Ga0395898_0402914
309 Ga0395905_0044574
310 Ga0395905_0051298
311 Ga0395905_0075682
312 Ga0395905_0085267
313 Ga0395905_0282264
314 Ga0395901_0041285
315 Ga0395901_0079699
316 Ga0395901_0422125
317 Ga0395901_0653392
318 Ga0395901_0894006
319 Ga0439448_0101248
320 Ga0466961_0030784
321 Ga0466963_0028536
322 Ga0466963_0044521
323 Ga0466963_0158030
324 Ga0466963_0159839
325 Ga0466963_0474856
326 Ga0466971_0105542
327 Ga0466970_0147145
328 Ga0466957_0023221
329 Ga0466959_0045056
330 Ga0466958_0013310
331 Ga0466958_0032895
332 Ga0466958_0176442
333 Ga0466967_0014989
334 Ga0466967_0036791
335 Ga0495592_0047804
336 Ga0495629_0230397
337 Ga0495582_0069999
338 Ga0495594_0108184
339 Ga0495618_0386378
340 Ga0495665_0057053
341 Ga0495586_0252961
342 Ga0495667_0020785
343 Ga0495667_0056648
344 Ga0495634_0051120
345 Ga0495634_0108365
346 Ga0495635_0151780
347 Ga0495659_0201398
348 Ga0495657_0076699
349 Ga0495623_0035160
350 Ga0495658_0094264
351 Ga0495658_0171882
352 Ga0495613_0244117
353 Ga0495624_0092426
354 Ga0495600_0043359
355 Ga0495604_0035013
356 Ga0495676_0111334
357 Ga0495676_0199426
358 Ga0495684_0029032
359 Ga0496100_0002674
360 Ga0496100_0034494
361 Ga0496101_0132390
362 Ga0496102_0021939
363 Ga0496102_0864118
364 Ga0496104_0144735
365 Ga0496105_0005123
366 Ga0496105_0246989
367 Ga0496106_0108988
368 Ga0496106_0130401
369 Ga0496106_0230184
370 Ga0496107_0004731
371 Ga0496107_0245130
372 Ga0496108_0014087
373 Ga0496108_0111082
374 Ga0496108_0195568
375 Ga0496108_0264793
376 Ga0496109_0016107
377 Ga0496109_0058368
378 Ga0496109_0156706
379 Ga0496109_0221913
380 Ga0496109_0241409
381 Ga0496109_0254050
382 Ga0496110_0018581
383 Ga0496110_0045522
384 Ga0496110_0057317
385 Ga0496110_0424732
386 Ga0496111_0059119
387 Ga0496111_0113646
388 Ga0496112_0033476
389 Ga0496112_0225717
390 Ga0496113_0304329
391 Ga0496114_0031169
392 Ga0496115_0008936
393 Ga0496115_0068150
394 Ga0501031_0095382
395 Ga0501037_0276698
396 Ga0501039_0350708
397 Ga0501040_0487949
398 Ga0501041_0049998
399 Ga0501041_0245029
400 Ga0501047_0241162
401 Ga0501067_0086659
402 Ga0501069_0232367
403 Ga0501070_0011616
404 Ga0501070_0208035
405 Ga0501071_0013891
406 Ga0501072_0117543
407 Ga0501075_0058649
408 Ga0501075_0092362
409 Ga0501075_0208209
410 Ga0501076_0017379
411 Ga0501076_0105470
412 Ga0501080_0060459
413 Ga0501081_0097585
414 Ga0501035_0036558
415 Ga0501035_0077885
416 Ga0501035_0742888
417 Ga0501044_0027792
418 Ga0501045_0630408
419 Ga0501045_0631845
420 nmdc:mga05p37_190719_c1
421 nmdc:mga05p37_918119_c1
422 nmdc:mga09592_51142_c1
423 nmdc:mga0qj67_164465_c1
424 nmdc:mga0qj67_3118_c1
425 nmdc:mga08y16_89014_c1
426 nmdc:mga0rr50_28077_c1
427 nmdc:mga08x19_7791_c1
428 Ga0495619_0026063
429 Ga0495619_0034440
430 Ga0501084_0171165
431 Ga0501082_0031387
432 Ga0501082_0113083
433 Ga0501082_0249760
434 Ga0466962_0031180
435 Ga0466962_0126897
436 2996338443

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00285

Citrate_synt

Citrate synthase, C-terminal domain

11

246

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
6hxp-assembly1.cif.gz_A structure of citryl-coa lyase from hydrogenobacter thermophilus 0.864 10 265
8gi7-assembly2.cif.gz_D c143a variant of citrate synthase (cita) in mycobacterium tuberculosis 0.849 36 241
1ixe-assembly2.cif.gz_C crystal structure of citrate synthase from thermus thermophilus hb8 0.847 36 264
1ixe-assembly2.cif.gz_D crystal structure of citrate synthase from thermus thermophilus hb8 0.8421 36 264
6nzy-assembly1.cif.gz_C structural determination of the carboxy-terminal portion of atp-citrate lyase 0.8413 5 265
ID Description Score Start End Superfamily
2p2wA02 Mainly Alpha;Orthogonal Bundle;Cytochrome p450-Terp; domain 2;Cytochrome P450-Terp, domain 2 0.8527 106 209 1.10.230.10
1ixeD02 Mainly Alpha;Orthogonal Bundle;Cytochrome p450-Terp; domain 2;Cytochrome P450-Terp, domain 2 0.849 106 210 1.10.230.10
1ixeD02 Mainly Alpha;Orthogonal Bundle;Cytochrome p450-Terp; domain 2;Cytochrome P450-Terp, domain 2 0.8329 106 210 1.10.230.10
2p2wA02 Mainly Alpha;Orthogonal Bundle;Cytochrome p450-Terp; domain 2;Cytochrome P450-Terp, domain 2 0.8295 106 209 1.10.230.10
af_Q8I6U7_394_509_1.10.580.10 Mainly Alpha;Orthogonal Bundle;Citrate Synthase; domain 1;Citrate Synthase, domain 1 0.8294 108 212 1.10.580.10
ID Description Score Start End GO Terms
AF-A0A432V3A8-F1-model_v4 citrate synthase (unknown stereospecificity) (EC 2.3.3.16) 0.976 1 260 GO:0004108
GO:0005829
GO:0005975
GO:0006099
GO:0016829
AF-A0A432V3A8-F1-model_v4 citrate synthase (unknown stereospecificity) (EC 2.3.3.16) 0.9723 1 260 GO:0004108
GO:0005829
GO:0005975
GO:0006099
GO:0016829
AF-A0A363TPX2-F1-model_v4 citrate synthase (unknown stereospecificity) (EC 2.3.3.16) 0.9722 1 260 GO:0004108
GO:0005829
GO:0005975
GO:0006099
GO:0016829
AF-A0A2E4H0D0-F1-model_v4 citrate synthase (unknown stereospecificity) (EC 2.3.3.16) 0.9571 1 260 GO:0004108
GO:0005829
GO:0005975
GO:0006099
GO:0016829
AF-A0A5P2H189-F1-model_v4 citrate synthase (unknown stereospecificity) (EC 2.3.3.16) 0.9559 1 260 GO:0004108
GO:0005829
GO:0005975
GO:0006099
GO:0016829

Map