F329365
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 217 | 185 | 434 | 594 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2935890801|2935891835 |
| Length | 645 |
| Sequence | TTPTSARGRRRGAKAKPEVVVEDATGARIASASSLGVFATLRKGVQMSPEILVGIWGTLLLAVVAALGRIVVPITVQQTVDSGIMAPGGPDTSRVALLVGAAAIVLVVAGLCSALVNVRLFRSTEAGLASLRVRAFRHVHDLSVLTQSTERRGALVSRVTSDVDTISLFVQWGGIMLLVSVLQIGAATLLMAFYSWQLTLLVWACFVPLFLVLRPAQGRVNGAYTALRERVGAMLGAISESVVGAETIRAYGVGERTARRVDAAVESTRKGMVRAQVLVSTVFSSGVLVANLVLAVVVVVGTLLGIDGSITAGQLLAFLFLVQLFTGPVQMATEILNELQNAVAGWRRVLAVVETPVQVVDKGAQGVRSPRGPAHVRLEDVRFAYPDGPEVLHGVDLDFPARTSVAVVGATGSGKTTIAKLVTRLMDPTSGAVRLDGVDLRDLSAASLRERVVLVPQEGFLFDGTLAENIAYGVRDTASGTSGTSGASGTADAPHAGETPAQTAARLADRIDAAVAELGLTDWVADLPDGLGSAVGQRGEALSAGERQLVAIARAYLAEADLLVLDEATSAVDPATEVRIARALDSLTAGRSTITIAHRLSTAEAADLVVVVDAGHVVEVGPHAELAAAGGVYASMHASWVAQTR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 2 | 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Metagenome | Rhizosphere |
| 3 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 4 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 5 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 6 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 7 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 8 | 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Metagenome | Rhizosphere |
| 9 | 3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Metagenome | Rhizosphere |
| 10 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 16 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 17 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 19 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 20 | 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 23 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 24 | 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005840 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 | Metagenome | Rhizosphere |
| 26 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 27 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 28 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 29 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 30 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 31 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 32 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 33 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 34 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 35 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 36 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 37 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 38 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 46 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300020070 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 49 | 3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 74 | 3300030522 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM | Metagenome | Unclassified |
| 75 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 76 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 77 | 3300031691 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA | Metagenome | Rhizosphere |
| 78 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 79 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 80 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 81 | 3300035207 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 | Metagenome | Rhizosphere |
| 82 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 83 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 84 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 85 | 3300042157 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 | Metagenome | Rhizosphere |
| 86 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 87 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 88 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 89 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 90 | 3300046453 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046461 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300048091 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 98 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 99 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 100 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 101 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 102 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 103 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 104 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 105 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 106 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 107 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 108 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 109 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 110 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 111 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 112 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 113 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 114 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 115 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 116 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 117 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 118 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 119 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 120 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 121 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 122 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 123 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 124 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 125 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 126 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 127 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 128 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 129 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 130 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 131 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 132 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 133 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 134 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 135 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 136 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 137 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 138 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 139 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 140 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 141 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
| 142 | 3300053104 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere | Metagenome | Endosphere |
| 143 | 3300053109 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere | Metagenome | Endosphere |
| 144 | 3300053117 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere | Metagenome | Endosphere |
| 145 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 146 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 147 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 148 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 149 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 150 | 2935890801 | Oerskovia enterophila 3230 | Isolate | Rhizosphere |
| 151 | 2643221567 | Phycicoccus sp. Root563 | Isolate | Unclassified |
| 152 | 2643221613 | Oerskovia sp. Root22 | Isolate | Unclassified |
| 153 | 2643221624 | Phycicoccus sp. Root101 | Isolate | Unclassified |
| 154 | 2643221711 | Terrabacter sp. Root85 | Isolate | Unclassified |
| 155 | 2643221721 | Oerskovia sp. Root918 | Isolate | Unclassified |
| 156 | 2675903059 | Asanoa hainanensis CGMCC 4.5593 | Isolate | Rhizosphere |
| 157 | 2738541272 | Promicromonospora sp. AC04 | Isolate | Unclassified |
| 158 | 2738543027 | Promicromonospora sp. CF082 | Isolate | Unclassified |
| 159 | 2739367654 | Promicromonospora sp. YR516 | Isolate | Unclassified |
| 160 | 2751185782 | Actinoplanes subtropicus NRRL B-24665 | Isolate | Rhizosphere |
| 161 | 2758568522 | Promicromonospora thailandica SAI-039 | Isolate | Unclassified |
| 162 | 2758568621 | Promicromonospora sukumoe SAI-064 | Isolate | Unclassified |
| 163 | 2773857762 | Nocardioides sp. SAI-095 | Isolate | Unclassified |
| 164 | 2784132109 | Dermacoccus sp. DS28 SAI-028 | Isolate | Unclassified |
| 165 | 2808606365 | Phycicoccus sp. SLBN-51 | Isolate | Unclassified |
| 166 | 2808606394 | Promicromonospora sp. C35 | Isolate | Unclassified |
| 167 | 2808606439 | Nocardioides sp. SLBN-172 | Isolate | Unclassified |
| 168 | 2811994878 | Nocardioides sp. SLBN-169 | Isolate | Unclassified |
| 169 | 2811994880 | Cellulomonas sp. SLBN-39 | Isolate | Unclassified |
| 170 | 2811994882 | Terrabacter sp. SLBN-196 | Isolate | Unclassified |
| 171 | 2818991318 | Humibacillus xanthopallidus SLBN-155 | Isolate | Unclassified |
| 172 | 2818991458 | Terrabacter sp. 3211 | Isolate | Rhizosphere |
| 173 | 2818991462 | Terrabacter sp. 3264 | Isolate | Rhizosphere |
| 174 | 2818991469 | Terrabacter lapilli 3265 | Isolate | Rhizosphere |
| 175 | 2835188231 | Isoptericola variabilis JZ7 | Isolate | Unclassified |
| 176 | 2839986021 | Cellulosimicrobium cellulans JZ5 | Isolate | Unclassified |
| 177 | 2884994152 | Cellulomonas sp. H30R-01 | Isolate | Rhizosphere |
| 178 | 2887478801 | Catellatospora paridis NEAU-CL2 | Isolate | Rhizosphere |
| 179 | 2891968417 | Nocardioides luteus SAI-037 | Isolate | Unclassified |
| 180 | 2919446982 | Phycicoccus sp. 3266 | Isolate | Rhizosphere |
| 181 | 2932431166 | Cellulosimicrobium sp. 4261 | Isolate | Rhizosphere |
| 182 | 3001889506 | Janibacter sp. YIM B02568 | Isolate | Unclassified |
| 183 | 3002998708 | Actinomadura barringtoniae GKU 128 | Isolate | Unclassified |
| 184 | 8053945823 | Actinomadura terrae OS3-83 | Isolate | Rhizosphere |
| 185 | 8056579771 | Promicromonospora iranensis UTMC 00792 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 82.95 |
| Metatranscriptomes | 0.46 |
| Isolates | 16.59 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 3.23 |
| Nodule | 0 |
| Rhizoplane | 9.22 |
| Rhizosphere | 69.12 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25406J46586_10024987 | 3300003203 | Bacteria | 2328 |
| 2 | Ga0070690_100034512 | 3300005330 | Bacteria | 3170 |
| 3 | Ga0068869_100041273 | 3300005334 | Bacteria | 3303 |
| 4 | Ga0070680_100020438 | 3300005336 | Bacteria | 5255 |
| 5 | Ga0070682_100028632 | 3300005337 | Bacteria | 3351 |
| 6 | Ga0068868_100013484 | 3300005338 | Bacteria | 5993 |
| 7 | Ga0070689_100047812 | 3300005340 | Bacteria | 3299 |
| 8 | Ga0070691_10011535 | 3300005341 | Bacteria | 4037 |
| 9 | Ga0070692_10005515 | 3300005345 | Bacteria | 5404 |
| 10 | Ga0070668_100003882 | 3300005347 | Bacteria | 11036 |
| 11 | Ga0070675_100049370 | 3300005354 | Bacteria | 3454 |
| 12 | Ga0070671_100003386 | 3300005355 | Bacteria | 12436 |
| 13 | Ga0070673_100039776 | 3300005364 | Bacteria | 3602 |
| 14 | Ga0070659_100063348 | 3300005366 | Bacteria | 2925 |
| 15 | Ga0070713_100003786 | 3300005436 | Bacteria | 10015 |
| 16 | Ga0070700_100036896 | 3300005441 | Bacteria | 2968 |
| 17 | Ga0070678_100002907 | 3300005456 | Bacteria | 9487 |
| 18 | Ga0070681_10080262 | 3300005458 | Bacteria | 3218 |
| 19 | Ga0068853_100012763 | 3300005539 | Bacteria | 6841 |
| 20 | Ga0070693_100031751 | 3300005547 | Bacteria | 2898 |
| 21 | Ga0070665_100095253 | 3300005548 | Bacteria | 2981 |
| 22 | Ga0070665_100116159 | 3300005548 | Bacteria | 2678 |
| 23 | Ga0068855_100042816 | 3300005563 | Bacteria | 5364 |
| 24 | Ga0068854_100093852 | 3300005578 | Bacteria | 2237 |
| 25 | Ga0070702_100001182 | 3300005615 | Bacteria | 10518 |
| 26 | Ga0068870_10005551 | 3300005840 | Bacteria | 5508 |
| 27 | Ga0068863_100008042 | 3300005841 | Bacteria | 10298 |
| 28 | Ga0068858_100018248 | 3300005842 | Bacteria | 6570 |
| 29 | Ga0068860_100013288 | 3300005843 | Bacteria | 8075 |
| 30 | Ga0068860_100149105 | 3300005843 | Bacteria | 2252 |
| 31 | Ga0068862_100096555 | 3300005844 | Bacteria | 2580 |
| 32 | Ga0081539_10001654 | 3300005985 | Bacteria | 36124 |
| 33 | Ga0081539_10004234 | 3300005985 | Bacteria | 16144 |
| 34 | Ga0081539_10007662 | 3300005985 | Bacteria | 9715 |
| 35 | Ga0075365_10047414 | 3300006038 | Bacteria | 2824 |
| 36 | Ga0075428_100002388 | 3300006844 | Bacteria | 20390 |
| 37 | Ga0075430_100001494 | 3300006846 | Bacteria | 19070 |
| 38 | Ga0075431_100011984 | 3300006847 | Bacteria | 8747 |
| 39 | Ga0075429_100001255 | 3300006880 | Bacteria | 20625 |
| 40 | Ga0075436_100007292 | 3300006914 | Bacteria | 7561 |
| 41 | Ga0075435_100006931 | 3300007076 | Bacteria | 8041 |
| 42 | Ga0111539_10130222 | 3300009094 | Bacteria | 2946 |
| 43 | Ga0105245_10017329 | 3300009098 | Bacteria | 6283 |
| 44 | Ga0114129_10002477 | 3300009147 | Bacteria | 25644 |
| 45 | Ga0105243_10028069 | 3300009148 | Bacteria | 4317 |
| 46 | Ga0105243_10083812 | 3300009148 | Bacteria | 2609 |
| 47 | Ga0105248_10046324 | 3300009177 | Bacteria | 4873 |
| 48 | Ga0105237_10079499 | 3300009545 | Bacteria | 3269 |
| 49 | Ga0105238_10029621 | 3300009551 | Bacteria | 5575 |
| 50 | Ga0105246_10009211 | 3300011119 | Bacteria | 6079 |
| 51 | Ga0157374_10019990 | 3300013296 | Bacteria | 5936 |
| 52 | Ga0163163_10026324 | 3300014325 | Bacteria | 5558 |
| 53 | Ga0206356_10234140 | 3300020070 | Bacteria | 2430 |
| 54 | Ga0207688_10017196 | 3300025901 | Bacteria | 3930 |
| 55 | Ga0207645_10028454 | 3300025907 | Bacteria | 3607 |
| 56 | Ga0207643_10000094 | 3300025908 | Bacteria | 60399 |
| 57 | Ga0207705_10049959 | 3300025909 | Bacteria | 3010 |
| 58 | Ga0207707_10050178 | 3300025912 | Bacteria | 3635 |
| 59 | Ga0207693_10086311 | 3300025915 | Bacteria | 2459 |
| 60 | Ga0207663_10050612 | 3300025916 | Bacteria | 2582 |
| 61 | Ga0207652_10020877 | 3300025921 | Bacteria | 5399 |
| 62 | Ga0207650_10014211 | 3300025925 | Bacteria | 5531 |
| 63 | Ga0207687_10009706 | 3300025927 | Bacteria | 6296 |
| 64 | Ga0207687_10050213 | 3300025927 | Bacteria | 2903 |
| 65 | Ga0207644_10013372 | 3300025931 | Bacteria | 5470 |
| 66 | Ga0207689_10001041 | 3300025942 | Bacteria | 26632 |
| 67 | Ga0207661_10039378 | 3300025944 | Bacteria | 3710 |
| 68 | Ga0207661_10041473 | 3300025944 | Bacteria | 3624 |
| 69 | Ga0207667_10066115 | 3300025949 | Bacteria | 3770 |
| 70 | Ga0207668_10000634 | 3300025972 | Bacteria | 21686 |
| 71 | Ga0207668_10013789 | 3300025972 | Bacteria | 4988 |
| 72 | Ga0207703_10095168 | 3300026035 | Bacteria | 2512 |
| 73 | Ga0207678_10004546 | 3300026067 | Bacteria | 12476 |
| 74 | Ga0207708_10051596 | 3300026075 | Bacteria | 3132 |
| 75 | Ga0207648_10058946 | 3300026089 | Bacteria | 3348 |
| 76 | Ga0207676_10004885 | 3300026095 | Bacteria | 9492 |
| 77 | Ga0207683_10004355 | 3300026121 | Bacteria | 12232 |
| 78 | Ga0207683_10036579 | 3300026121 | Bacteria | 4276 |
| 79 | Ga0207698_10084280 | 3300026142 | Bacteria | 2576 |
| 80 | Ga0268266_10015843 | 3300028379 | Bacteria | 6453 |
| 81 | Ga0268266_10099980 | 3300028379 | Bacteria | 2554 |
| 82 | Ga0268265_10070109 | 3300028380 | Bacteria | 2725 |
| 83 | Ga0307515_10006253 | 3300028794 | Bacteria | 23892 |
| 84 | Ga0307512_10003927 | 3300030522 | Bacteria | 16644 |
| 85 | Ga0307512_10021917 | 3300030522 | Bacteria | 5752 |
| 86 | Ga0307513_10016713 | 3300031456 | Bacteria | 8830 |
| 87 | Ga0307508_10002972 | 3300031616 | Bacteria | 17504 |
| 88 | Ga0307508_10002978 | 3300031616 | Bacteria | 17475 |
| 89 | Ga0307508_10019511 | 3300031616 | Bacteria | 6163 |
| 90 | Ga0307508_10054245 | 3300031616 | Bacteria | 3555 |
| 91 | Ga0316579_10000008 | 3300031691 | Bacteria | 52798 |
| 92 | Ga0307516_10021160 | 3300031730 | Bacteria | 6704 |
| 93 | Ga0307409_100013322 | 3300031995 | Bacteria | 5286 |
| 94 | Ga0307409_100014165 | 3300031995 | Bacteria | 5171 |
| 95 | Ga0307409_100142330 | 3300031995 | Bacteria | 2068 |
| 96 | Ga0307416_100016340 | 3300032002 | Bacteria | 5155 |
| 97 | Ga0373942_0000273 | 3300035207 | Bacteria | 13907 |
| 98 | Ga0373935_0012704 | 3300035692 | Bacteria | 5069 |
| 99 | Ga0395898_0005189 | 3300037466 | Bacteria | 14089 |
| 100 | Ga0395901_0016019 | 3300038443 | Bacteria | 7637 |
| 101 | Ga0395901_0232562 | 3300038443 | Bacteria | 1924 |
| 102 | Ga0439458_0009439 | 3300042157 | Bacteria | 2171 |
| 103 | Ga0466965_0007645 | 3300044683 | Bacteria | 4973 |
| 104 | Ga0466960_0048348 | 3300044901 | Bacteria | 2044 |
| 105 | Ga0466958_0011154 | 3300045836 | Bacteria | 5056 |
| 106 | Ga0466967_0110055 | 3300045976 | Bacteria | 2530 |
| 107 | Ga0495627_013017 | 3300046453 | Bacteria | 2936 |
| 108 | Ga0495641_0016526 | 3300046461 | Bacteria | 3886 |
| 109 | Ga0495641_0024113 | 3300046461 | Bacteria | 3008 |
| 110 | Ga0495606_0003729 | 3300046507 | Bacteria | 15888 |
| 111 | Ga0495640_0083355 | 3300046533 | Bacteria | 2122 |
| 112 | Ga0495668_0001119 | 3300046616 | Bacteria | 27662 |
| 113 | Ga0495625_0000837 | 3300046660 | Bacteria | 42274 |
| 114 | Ga0495626_0000633 | 3300048091 | Bacteria | 34113 |
| 115 | Ga0496100_0089357 | 3300048903 | Bacteria | 2098 |
| 116 | Ga0496102_0007750 | 3300048905 | Bacteria | 9174 |
| 117 | Ga0496102_0012183 | 3300048905 | Bacteria | 7434 |
| 118 | Ga0496102_0015007 | 3300048905 | Bacteria | 6742 |
| 119 | Ga0496102_0052238 | 3300048905 | Bacteria | 3723 |
| 120 | Ga0496103_0028567 | 3300048906 | Bacteria | 3385 |
| 121 | Ga0496104_0014811 | 3300048907 | Bacteria | 7048 |
| 122 | Ga0496105_0042095 | 3300048908 | Bacteria | 3765 |
| 123 | Ga0496106_0070293 | 3300048909 | Bacteria | 2673 |
| 124 | Ga0496106_0110708 | 3300048909 | Bacteria | 2138 |
| 125 | Ga0496107_0030830 | 3300048910 | Bacteria | 3824 |
| 126 | Ga0496108_0000481 | 3300048911 | Bacteria | 31977 |
| 127 | Ga0496108_0159323 | 3300048911 | Bacteria | 1950 |
| 128 | Ga0496110_0013953 | 3300048913 | Bacteria | 6657 |
| 129 | Ga0496111_0002429 | 3300048914 | Bacteria | 11240 |
| 130 | Ga0496112_0053668 | 3300048915 | Bacteria | 3959 |
| 131 | Ga0496113_0020392 | 3300048916 | Bacteria | 4659 |
| 132 | Ga0496113_0063986 | 3300048916 | Bacteria | 2780 |
| 133 | Ga0496113_0143258 | 3300048916 | Bacteria | 1881 |
| 134 | Ga0496114_0012946 | 3300048917 | Bacteria | 6683 |
| 135 | Ga0496117_0071584 | 3300048920 | Bacteria | 2322 |
| 136 | Ga0496119_0033117 | 3300048922 | Bacteria | 3433 |
| 137 | Ga0496122_0000548 | 3300048925 | Bacteria | 77737 |
| 138 | Ga0496123_0000166 | 3300048926 | Bacteria | 131527 |
| 139 | Ga0496124_0001432 | 3300048927 | Bacteria | 35312 |
| 140 | Ga0496125_0000025 | 3300048928 | Bacteria | 440074 |
| 141 | Ga0496126_0011688 | 3300048929 | Bacteria | 9053 |
| 142 | Ga0501031_0001468 | 3300049568 | Bacteria | 14634 |
| 143 | Ga0501031_0006140 | 3300049568 | Bacteria | 7842 |
| 144 | Ga0501036_0003734 | 3300049572 | Bacteria | 12203 |
| 145 | Ga0501036_0008607 | 3300049572 | Bacteria | 8371 |
| 146 | Ga0501038_0051605 | 3300049574 | Bacteria | 3548 |
| 147 | Ga0501039_0002459 | 3300049575 | Bacteria | 13796 |
| 148 | Ga0501040_0015849 | 3300049576 | Bacteria | 4980 |
| 149 | Ga0501041_0000361 | 3300049577 | Bacteria | 22576 |
| 150 | Ga0501042_0002175 | 3300049578 | Bacteria | 11943 |
| 151 | Ga0501042_0017393 | 3300049578 | Bacteria | 4958 |
| 152 | Ga0501043_0031958 | 3300049579 | Bacteria | 4137 |
| 153 | Ga0501046_0024619 | 3300049580 | Bacteria | 4936 |
| 154 | Ga0501048_0004004 | 3300049582 | Bacteria | 11197 |
| 155 | Ga0501048_0011294 | 3300049582 | Bacteria | 6659 |
| 156 | Ga0501071_0002289 | 3300049587 | Bacteria | 11547 |
| 157 | Ga0501074_0044423 | 3300049590 | Bacteria | 3216 |
| 158 | Ga0501074_0144844 | 3300049590 | Bacteria | 1699 |
| 159 | Ga0501075_0002261 | 3300049591 | Bacteria | 12762 |
| 160 | Ga0501076_0006520 | 3300049592 | Bacteria | 8466 |
| 161 | Ga0501077_0030274 | 3300049593 | Bacteria | 3444 |
| 162 | Ga0501079_0007019 | 3300049741 | Bacteria | 8494 |
| 163 | Ga0501081_0004768 | 3300049743 | Bacteria | 8725 |
| 164 | Ga0501045_0002246 | 3300049824 | Bacteria | 13125 |
| 165 | Ga0501045_0112283 | 3300049824 | Bacteria | 2021 |
| 166 | nmdc:mga05p37_1442_c1 | 3300050507 | Bacteria | 27643 |
| 167 | nmdc:mga09592_11784_c1 | 3300050508 | Bacteria | 7111 |
| 168 | nmdc:mga0qj67_7095_c1 | 3300050509 | Bacteria | 8266 |
| 169 | nmdc:mga06r32_6713_c1 | 3300050510 | Bacteria | 10344 |
| 170 | nmdc:mga08y16_79978_c1 | 3300050511 | Bacteria | 3408 |
| 171 | nmdc:mga0n895_21689_c1 | 3300050512 | Bacteria | 6011 |
| 172 | nmdc:mga08x19_14661_c1 | 3300050514 | Bacteria | 4759 |
| 173 | Ga0500556_0000534 | 3300053104 | Bacteria | 25901 |
| 174 | Ga0500569_003617 | 3300053109 | Bacteria | 3179 |
| 175 | Ga0500593_000177 | 3300053117 | Bacteria | 25732 |
| 176 | Ga0500573_0017828 | 3300053140 | Bacteria | 4044 |
| 177 | Ga0500616_0001827 | 3300053153 | Bacteria | 19297 |
| 178 | Ga0500616_0017709 | 3300053153 | Bacteria | 4039 |
| 179 | Ga0501084_0003145 | 3300054114 | Bacteria | 13348 |
| 180 | Ga0501082_0015456 | 3300060353 | Bacteria | 6569 |
| 181 | Ga0530510_0000603 | 3300061734 | Bacteria | 23094 |
| 182 | 2935891835 | 2935890801 | Bacteria | 4593001 |
| 183 | 2643849696 | 2643221567 | Bacteria | 4163945 |
| 184 | 2644084318 | 2643221613 | Bacteria | 4622396 |
| 185 | 2644135699 | 2643221624 | Bacteria | 4384879 |
| 186 | 2644611058 | 2643221711 | Bacteria | 4865335 |
| 187 | 2644664364 | 2643221721 | Bacteria | 4486924 |
| 188 | 2676483605 | 2675903059 | Bacteria | 8644972 |
| 189 | 2738696020 | 2738541272 | Bacteria | 6848551 |
| 190 | 2739324843 | 2738543027 | Bacteria | 6409078 |
| 191 | 2739605640 | 2739367654 | Bacteria | 6049412 |
| 192 | 2753268254 | 2751185782 | Bacteria | 11227053 |
| 193 | 2760307524 | 2758568522 | Bacteria | 5953541 |
| 194 | 2760623957 | 2758568621 | Bacteria | 5967089 |
| 195 | 2774393357 | 2773857762 | Bacteria | 5971770 |
| 196 | 2784472353 | 2784132109 | Bacteria | 3141763 |
| 197 | 2808874457 | 2808606365 | Bacteria | 4301966 |
| 198 | 2809028871 | 2808606394 | Bacteria | 6248540 |
| 199 | 2809195755 | 2808606439 | Bacteria | 5952208 |
| 200 | 2812350652 | 2811994878 | Bacteria | 5992952 |
| 201 | 2812365031 | 2811994880 | Bacteria | 4147780 |
| 202 | 2812375108 | 2811994882 | Bacteria | 4688362 |
| 203 | 2819427865 | 2818991318 | Bacteria | 5266538 |
| 204 | 2819666743 | 2818991458 | Bacteria | 4794049 |
| 205 | 2819691867 | 2818991462 | Bacteria | 4320267 |
| 206 | 2819729356 | 2818991469 | Bacteria | 4644110 |
| 207 | 2835191749 | 2835188231 | Bacteria | 3476928 |
| 208 | 2839989143 | 2839986021 | Bacteria | 3685650 |
| 209 | 2884995332 | 2884994152 | Bacteria | 4492978 |
| 210 | 2887481206 | 2887478801 | Bacteria | 8972725 |
| 211 | 2891971748 | 2891968417 | Bacteria | 5821697 |
| 212 | 2919450584 | 2919446982 | Bacteria | 3994487 |
| 213 | 2932431737 | 2932431166 | Bacteria | 4215299 |
| 214 | 3001891583 | 3001889506 | Bacteria | 2975194 |
| 215 | 3003009169 | 3002998708 | Bacteria | 11715108 |
| 216 | 8053947390 | 8053945823 | Bacteria | 8962862 |
| 217 | 8056585093 | 8056579771 | Bacteria | 5840325 |
| 218 | JGI25406J46586_10024987 | |||
| 219 | Ga0070690_100034512 | |||
| 220 | Ga0068869_100041273 | |||
| 221 | Ga0070680_100020438 | |||
| 222 | Ga0070682_100028632 | |||
| 223 | Ga0068868_100013484 | |||
| 224 | Ga0070689_100047812 | |||
| 225 | Ga0070691_10011535 | |||
| 226 | Ga0070692_10005515 | |||
| 227 | Ga0070668_100003882 | |||
| 228 | Ga0070675_100049370 | |||
| 229 | Ga0070671_100003386 | |||
| 230 | Ga0070673_100039776 | |||
| 231 | Ga0070659_100063348 | |||
| 232 | Ga0070713_100003786 | |||
| 233 | Ga0070700_100036896 | |||
| 234 | Ga0070678_100002907 | |||
| 235 | Ga0070681_10080262 | |||
| 236 | Ga0068853_100012763 | |||
| 237 | Ga0070693_100031751 | |||
| 238 | Ga0070665_100095253 | |||
| 239 | Ga0070665_100116159 | |||
| 240 | Ga0068855_100042816 | |||
| 241 | Ga0068854_100093852 | |||
| 242 | Ga0070702_100001182 | |||
| 243 | Ga0068870_10005551 | |||
| 244 | Ga0068863_100008042 | |||
| 245 | Ga0068858_100018248 | |||
| 246 | Ga0068860_100013288 | |||
| 247 | Ga0068860_100149105 | |||
| 248 | Ga0068862_100096555 | |||
| 249 | Ga0081539_10001654 | |||
| 250 | Ga0081539_10004234 | |||
| 251 | Ga0081539_10007662 | |||
| 252 | Ga0075365_10047414 | |||
| 253 | Ga0075428_100002388 | |||
| 254 | Ga0075430_100001494 | |||
| 255 | Ga0075431_100011984 | |||
| 256 | Ga0075429_100001255 | |||
| 257 | Ga0075436_100007292 | |||
| 258 | Ga0075435_100006931 | |||
| 259 | Ga0111539_10130222 | |||
| 260 | Ga0105245_10017329 | |||
| 261 | Ga0114129_10002477 | |||
| 262 | Ga0105243_10028069 | |||
| 263 | Ga0105243_10083812 | |||
| 264 | Ga0105248_10046324 | |||
| 265 | Ga0105237_10079499 | |||
| 266 | Ga0105238_10029621 | |||
| 267 | Ga0105246_10009211 | |||
| 268 | Ga0157374_10019990 | |||
| 269 | Ga0163163_10026324 | |||
| 270 | Ga0206356_10234140 | |||
| 271 | Ga0207688_10017196 | |||
| 272 | Ga0207645_10028454 | |||
| 273 | Ga0207643_10000094 | |||
| 274 | Ga0207705_10049959 | |||
| 275 | Ga0207707_10050178 | |||
| 276 | Ga0207693_10086311 | |||
| 277 | Ga0207663_10050612 | |||
| 278 | Ga0207652_10020877 | |||
| 279 | Ga0207650_10014211 | |||
| 280 | Ga0207687_10009706 | |||
| 281 | Ga0207687_10050213 | |||
| 282 | Ga0207644_10013372 | |||
| 283 | Ga0207689_10001041 | |||
| 284 | Ga0207661_10039378 | |||
| 285 | Ga0207661_10041473 | |||
| 286 | Ga0207667_10066115 | |||
| 287 | Ga0207668_10000634 | |||
| 288 | Ga0207668_10013789 | |||
| 289 | Ga0207703_10095168 | |||
| 290 | Ga0207678_10004546 | |||
| 291 | Ga0207708_10051596 | |||
| 292 | Ga0207648_10058946 | |||
| 293 | Ga0207676_10004885 | |||
| 294 | Ga0207683_10004355 | |||
| 295 | Ga0207683_10036579 | |||
| 296 | Ga0207698_10084280 | |||
| 297 | Ga0268266_10015843 | |||
| 298 | Ga0268266_10099980 | |||
| 299 | Ga0268265_10070109 | |||
| 300 | Ga0307515_10006253 | |||
| 301 | Ga0307512_10003927 | |||
| 302 | Ga0307512_10021917 | |||
| 303 | Ga0307513_10016713 | |||
| 304 | Ga0307508_10002972 | |||
| 305 | Ga0307508_10002978 | |||
| 306 | Ga0307508_10019511 | |||
| 307 | Ga0307508_10054245 | |||
| 308 | Ga0316579_10000008 | |||
| 309 | Ga0307516_10021160 | |||
| 310 | Ga0307409_100013322 | |||
| 311 | Ga0307409_100014165 | |||
| 312 | Ga0307409_100142330 | |||
| 313 | Ga0307416_100016340 | |||
| 314 | Ga0373942_0000273 | |||
| 315 | Ga0373935_0012704 | |||
| 316 | Ga0395898_0005189 | |||
| 317 | Ga0395901_0016019 | |||
| 318 | Ga0395901_0232562 | |||
| 319 | Ga0439458_0009439 | |||
| 320 | Ga0466965_0007645 | |||
| 321 | Ga0466960_0048348 | |||
| 322 | Ga0466958_0011154 | |||
| 323 | Ga0466967_0110055 | |||
| 324 | Ga0495627_013017 | |||
| 325 | Ga0495641_0016526 | |||
| 326 | Ga0495641_0024113 | |||
| 327 | Ga0495606_0003729 | |||
| 328 | Ga0495640_0083355 | |||
| 329 | Ga0495668_0001119 | |||
| 330 | Ga0495625_0000837 | |||
| 331 | Ga0495626_0000633 | |||
| 332 | Ga0496100_0089357 | |||
| 333 | Ga0496102_0007750 | |||
| 334 | Ga0496102_0012183 | |||
| 335 | Ga0496102_0015007 | |||
| 336 | Ga0496102_0052238 | |||
| 337 | Ga0496103_0028567 | |||
| 338 | Ga0496104_0014811 | |||
| 339 | Ga0496105_0042095 | |||
| 340 | Ga0496106_0070293 | |||
| 341 | Ga0496106_0110708 | |||
| 342 | Ga0496107_0030830 | |||
| 343 | Ga0496108_0000481 | |||
| 344 | Ga0496108_0159323 | |||
| 345 | Ga0496110_0013953 | |||
| 346 | Ga0496111_0002429 | |||
| 347 | Ga0496112_0053668 | |||
| 348 | Ga0496113_0020392 | |||
| 349 | Ga0496113_0063986 | |||
| 350 | Ga0496113_0143258 | |||
| 351 | Ga0496114_0012946 | |||
| 352 | Ga0496117_0071584 | |||
| 353 | Ga0496119_0033117 | |||
| 354 | Ga0496122_0000548 | |||
| 355 | Ga0496123_0000166 | |||
| 356 | Ga0496124_0001432 | |||
| 357 | Ga0496125_0000025 | |||
| 358 | Ga0496126_0011688 | |||
| 359 | Ga0501031_0001468 | |||
| 360 | Ga0501031_0006140 | |||
| 361 | Ga0501036_0003734 | |||
| 362 | Ga0501036_0008607 | |||
| 363 | Ga0501038_0051605 | |||
| 364 | Ga0501039_0002459 | |||
| 365 | Ga0501040_0015849 | |||
| 366 | Ga0501041_0000361 | |||
| 367 | Ga0501042_0002175 | |||
| 368 | Ga0501042_0017393 | |||
| 369 | Ga0501043_0031958 | |||
| 370 | Ga0501046_0024619 | |||
| 371 | Ga0501048_0004004 | |||
| 372 | Ga0501048_0011294 | |||
| 373 | Ga0501071_0002289 | |||
| 374 | Ga0501074_0044423 | |||
| 375 | Ga0501074_0144844 | |||
| 376 | Ga0501075_0002261 | |||
| 377 | Ga0501076_0006520 | |||
| 378 | Ga0501077_0030274 | |||
| 379 | Ga0501079_0007019 | |||
| 380 | Ga0501081_0004768 | |||
| 381 | Ga0501045_0002246 | |||
| 382 | Ga0501045_0112283 | |||
| 383 | nmdc:mga05p37_1442_c1 | |||
| 384 | nmdc:mga09592_11784_c1 | |||
| 385 | nmdc:mga0qj67_7095_c1 | |||
| 386 | nmdc:mga06r32_6713_c1 | |||
| 387 | nmdc:mga08y16_79978_c1 | |||
| 388 | nmdc:mga0n895_21689_c1 | |||
| 389 | nmdc:mga08x19_14661_c1 | |||
| 390 | Ga0500556_0000534 | |||
| 391 | Ga0500569_003617 | |||
| 392 | Ga0500593_000177 | |||
| 393 | Ga0500573_0017828 | |||
| 394 | Ga0500616_0001827 | |||
| 395 | Ga0500616_0017709 | |||
| 396 | Ga0501084_0003145 | |||
| 397 | Ga0501082_0015456 | |||
| 398 | Ga0530510_0000603 | |||
| 399 | 2935891835 | |||
| 400 | 2643849696 | |||
| 401 | 2644084318 | |||
| 402 | 2644135699 | |||
| 403 | 2644611058 | |||
| 404 | 2644664364 | |||
| 405 | 2676483605 | |||
| 406 | 2738696020 | |||
| 407 | 2739324843 | |||
| 408 | 2739605640 | |||
| 409 | 2753268254 | |||
| 410 | 2760307524 | |||
| 411 | 2760623957 | |||
| 412 | 2774393357 | |||
| 413 | 2784472353 | |||
| 414 | 2808874457 | |||
| 415 | 2809028871 | |||
| 416 | 2809195755 | |||
| 417 | 2812350652 | |||
| 418 | 2812365031 | |||
| 419 | 2812375108 | |||
| 420 | 2819427865 | |||
| 421 | 2819666743 | |||
| 422 | 2819691867 | |||
| 423 | 2819729356 | |||
| 424 | 2835191749 | |||
| 425 | 2839989143 | |||
| 426 | 2884995332 | |||
| 427 | 2887481206 | |||
| 428 | 2891971748 | |||
| 429 | 2919450584 | |||
| 430 | 2932431737 | |||
| 431 | 3001891583 | |||
| 432 | 3003009169 | |||
| 433 | 8053947390 | |||
| 434 | 8056585093 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2ghi-assembly4.cif.gz_D | crystal structure of plasmodium yoelii multidrug resistance protein 2 | 0.9406 | 350 | 561 |
| 4q7l-assembly1.cif.gz_A | structure of nbd288 of tm287/288 | 0.9337 | 349 | 561 |
| 4q7l-assembly2.cif.gz_B | structure of nbd288 of tm287/288 | 0.9294 | 351 | 561 |
| 4q7l-assembly3.cif.gz_C | structure of nbd288 of tm287/288 | 0.925 | 349 | 561 |
| 4q7m-assembly1.cif.gz_B | structure of nbd288-avi of tm287/288 | 0.9249 | 353 | 561 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_O53645_932_1184_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9555 | 345 | 561 | 3.40.50.300 |
| af_Q61102_466_725_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9482 | 352 | 561 | 3.40.50.300 |
| af_Q2FVJ2_326_574_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9463 | 345 | 561 | 3.40.50.300 |
| af_Q19015_1020_1270_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9437 | 374 | 561 | 3.40.50.300 |
| af_A0A1D6EBI5_368_610_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9407 | 347 | 561 | 3.40.50.300 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7Z9YWK5-F1-model_v4 | ATP-binding cassette domain-containing protein | 0.946 | 421 | 556 |
GO:0005524
GO:0016887 GO:0034040 |
| AF-A0A068WM67-F1-model_v4 | Multidrug resistance protein 1 | 0.9425 | 341 | 561 |
GO:0005524
GO:0005743 GO:0015421 GO:0016887 GO:0090374 |
| AF-A0A7C7CQ99-F1-model_v4 | ATP-binding cassette domain-containing protein | 0.9403 | 366 | 561 |
GO:0005524
GO:0012505 GO:0016887 GO:0042626 |
| AF-A0A529PA80-F1-model_v4 | ATP-binding cassette domain-containing protein | 0.9288 | 416 | 556 |
GO:0005524
GO:0016887 GO:0034040 |
| AF-A0A388Q3V0-F1-model_v4 | Lipid A export ATP-binding/permease protein MsbA | 0.9179 | 330 | 503 |
GO:0005524
GO:0016887 GO:0034040 |