F329058

General Info

Members Datasets Scaffolds Average Seq Length
217 128 434 309

Family's Representative Sequence

Representative Sequence 3300044683|Ga0466965_0055204|Ga0466965_0055204_618_1646
Length 342
Sequence MSPAELFSLPFMQRALIAAVCTGLAAPVVGTYLVQRRLALMGDGLGHVAVTGVALGLLTGTSPTWTAVVVAVLGAALIELIRERGHANGDVALALLFYGGLAGGVLLTGVGGESATHLQEYLFGSITTIGIGDVLVTMALAAVVIALGVGLSPQLFAVAQDQEFAKVSGLRVRGYNLLVAVLAAVSVTVAMRTVGLLLVSALMVVPVATSQQVSRSFRTTLFGAMALGTVASLGGLVISAFASYRATVAPGPTIVLLALACFAVAWPIGSLLRRRQRLVAPFPVDPEAPAVHQTCADEHVHRHGPECGHLAVEHGDHVDYVHDGHRHAVHVEPTGERHYDEH

Samples

Sample ID Description Type Environment
1 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
2 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
3 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
4 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
5 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
6 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
7 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
8 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
9 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
10 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
11 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
12 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
13 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
14 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
15 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
16 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
17 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
18 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
19 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
20 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
21 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
22 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
23 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
24 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
25 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
26 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
27 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
39 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
41 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
42 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
43 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
44 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
45 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
46 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
47 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
48 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
49 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
50 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
51 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
52 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
53 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
54 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
55 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
56 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
57 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
58 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
59 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
60 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
61 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
62 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
63 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
64 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
65 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
66 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
67 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
68 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
69 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
70 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
71 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
72 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
73 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
74 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
75 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
76 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
77 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
78 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
79 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
80 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
81 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
93 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
94 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
95 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
96 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
97 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
98 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
99 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
100 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
101 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
102 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
103 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
104 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
105 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
106 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
107 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
108 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
109 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
110 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
111 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
112 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
113 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
114 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
115 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
116 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
117 2643221561 Nocardioides sp. Root151 Isolate Unclassified
118 2643221615 Nocardioides sp. Root224 Isolate Unclassified
119 2643221617 Nocardioides sp. Root79 Isolate Unclassified
120 2643221620 Nocardioides sp. Root240 Isolate Unclassified
121 2643221641 Nocardioides sp. Root122 Isolate Unclassified
122 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
123 2643221696 Nocardioides sp. Root140 Isolate Unclassified
124 2739367898 Nocardioides sp. CF479 Isolate Unclassified
125 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
126 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
127 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
128 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 94.47
Metatranscriptomes 0
Isolates 5.53

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 24.88
Nodule 0.46
Rhizoplane 7.37
Rhizosphere 60.37
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466965_0055204 3300044683 Bacteria 1976
2 Ga0070668_100028291 3300005347 Bacteria 4256
3 Ga0070667_100033224 3300005367 Bacteria 4310
4 Ga0070708_100276399 3300005445 Bacteria 1580
5 Ga0070678_100096981 3300005456 Bacteria 2276
6 Ga0070662_100148570 3300005457 Bacteria 1822
7 Ga0070698_100006366 3300005471 Bacteria 12815
8 Ga0070684_100084157 3300005535 Bacteria 2819
9 Ga0070665_100515600 3300005548 Bacteria 1207
10 Ga0068856_100138876 3300005614 Bacteria 2437
11 Ga0068856_100214414 3300005614 Bacteria 1940
12 Ga0068860_100023860 3300005843 Bacteria 5912
13 Ga0075365_10002778 3300006038 Bacteria 8749
14 Ga0075365_10004729 3300006038 Bacteria 7263
15 Ga0075365_10021620 3300006038 Bacteria 4016
16 Ga0075365_10029842 3300006038 Bacteria 3488
17 Ga0075365_10038764 3300006038 Bacteria 3100
18 Ga0075365_10104484 3300006038 Bacteria 1942
19 Ga0075365_10111532 3300006038 Bacteria 1880
20 Ga0075365_10137350 3300006038 Bacteria 1695
21 Ga0075365_10194807 3300006038 Bacteria 1418
22 Ga0075368_10005717 3300006042 Bacteria 4299
23 Ga0075368_10014821 3300006042 Bacteria 2884
24 Ga0075363_100013906 3300006048 Bacteria 3918
25 Ga0075363_100013962 3300006048 Bacteria 3911
26 Ga0075363_100014686 3300006048 Bacteria 3835
27 Ga0075364_10019565 3300006051 Bacteria 4250
28 Ga0075364_10032255 3300006051 Bacteria 3367
29 Ga0075364_10066921 3300006051 Bacteria 2361
30 Ga0075364_10101429 3300006051 Bacteria 1916
31 Ga0075362_10014731 3300006177 Bacteria 3164
32 Ga0075367_10020923 3300006178 Bacteria 3650
33 Ga0075367_10025484 3300006178 Bacteria 3345
34 Ga0075367_10035531 3300006178 Bacteria 2885
35 Ga0075367_10118007 3300006178 Bacteria 1633
36 Ga0075370_10008621 3300006353 Bacteria 5256
37 Ga0075370_10017679 3300006353 Bacteria 3855
38 Ga0075370_10066473 3300006353 Bacteria 2057
39 Ga0105245_10119823 3300009098 Bacteria 2457
40 Ga0114129_10239516 3300009147 Bacteria 2439
41 Ga0105243_10284744 3300009148 Bacteria 1490
42 Ga0105249_10102605 3300009553 Bacteria 2693
43 Ga0105246_10279231 3300011119 Bacteria 1339
44 Ga0163162_10386547 3300013306 Bacteria 1532
45 Ga0163163_10374241 3300014325 Bacteria 1482
46 Ga0163161_10036581 3300017792 Bacteria 3516
47 Ga0207688_10180164 3300025901 Bacteria 1260
48 Ga0207657_10043861 3300025919 Bacteria 3936
49 Ga0207687_10064296 3300025927 Bacteria 2601
50 Ga0207704_10017553 3300025938 Bacteria 3714
51 Ga0207661_10203136 3300025944 Bacteria 1743
52 Ga0207679_10093450 3300025945 Bacteria 2332
53 Ga0207677_10034930 3300026023 Bacteria 3260
54 Ga0207639_10363632 3300026041 Bacteria 1295
55 Ga0207678_10009659 3300026067 Bacteria 8485
56 Ga0207678_10275949 3300026067 Bacteria 1442
57 Ga0207702_10138699 3300026078 Bacteria 2198
58 Ga0207683_10075035 3300026121 Bacteria 2993
59 Ga0209813_10020637 3300027866 Bacteria 1845
60 Ga0268264_10000510 3300028381 Bacteria 50047
61 Ga0307513_10066596 3300031456 Bacteria 3783
62 Ga0307413_10127222 3300031824 Bacteria 1737
63 Ga0307410_10019811 3300031852 Bacteria 4101
64 Ga0307410_10060941 3300031852 Bacteria 2581
65 Ga0307410_10240369 3300031852 Bacteria 1403
66 Ga0307407_10021188 3300031903 Bacteria 3347
67 Ga0307407_10156877 3300031903 Bacteria 1485
68 Ga0307407_10269677 3300031903 Bacteria 1174
69 Ga0307409_100034206 3300031995 Bacteria 3708
70 Ga0307409_100036471 3300031995 Bacteria 3615
71 Ga0307409_100152325 3300031995 Bacteria 2009
72 Ga0307409_100540817 3300031995 Bacteria 1142
73 Ga0307416_100007997 3300032002 Bacteria 6773
74 Ga0307416_100060492 3300032002 Bacteria 3085
75 Ga0307416_100332892 3300032002 Bacteria 1527
76 Ga0307411_10334556 3300032005 Bacteria 1228
77 Ga0307411_10403025 3300032005 Bacteria 1131
78 Ga0307415_100025732 3300032126 Bacteria 3699
79 Ga0395900_0555854 3300037418 Bacteria 1092
80 Ga0395901_0005983 3300038443 Bacteria 12316
81 Ga0395901_0057054 3300038443 Bacteria 4062
82 Ga0395901_0236094 3300038443 Bacteria 1908
83 Ga0436365_1681270 3300039437 Bacteria 3495
84 Ga0451837_0189405 3300041494 Bacteria 3819
85 Ga0451853_2572155 3300041512 Bacteria 2257
86 Ga0439431_0006656 3300041997 Bacteria 2561
87 Ga0439446_0035742 3300042156 Bacteria 1450
88 Ga0466961_0017843 3300044693 Bacteria 4562
89 Ga0466961_0022503 3300044693 Bacteria 4055
90 Ga0466961_0090389 3300044693 Bacteria 1934
91 Ga0466961_0206329 3300044693 Bacteria 1214
92 Ga0466963_0045880 3300044694 Bacteria 2879
93 Ga0466963_0155010 3300044694 Bacteria 1592
94 Ga0466964_0043633 3300044706 Bacteria 1819
95 Ga0466970_0008827 3300044765 Bacteria 5079
96 Ga0466970_0012157 3300044765 Bacteria 4396
97 Ga0466970_0022953 3300044765 Bacteria 3255
98 Ga0466970_0023150 3300044765 Bacteria 3243
99 Ga0466957_0010011 3300044842 Bacteria 5426
100 Ga0466957_0011755 3300044842 Bacteria 5060
101 Ga0466957_0178842 3300044842 Bacteria 1385
102 Ga0466957_0236494 3300044842 Bacteria 1211
103 Ga0466960_0006233 3300044901 Bacteria 4776
104 Ga0466960_0006743 3300044901 Bacteria 4624
105 Ga0466960_0011488 3300044901 Bacteria 3708
106 Ga0466960_0013618 3300044901 Bacteria 3460
107 Ga0466960_0064674 3300044901 Bacteria 1804
108 Ga0466958_0160388 3300045836 Bacteria 1420
109 Ga0466967_0099038 3300045976 Bacteria 2662
110 Ga0466967_0114199 3300045976 Bacteria 2486
111 Ga0495629_0050312 3300046459 Bacteria 2919
112 Ga0495664_0011540 3300046477 Bacteria 4983
113 Ga0495585_0061678 3300046492 Bacteria 2061
114 Ga0495600_0178287 3300046809 Bacteria 1370
115 Ga0496100_0204075 3300048903 Bacteria 1442
116 Ga0496100_0313125 3300048903 Bacteria 1177
117 Ga0496101_0011492 3300048904 Bacteria 5877
118 Ga0496102_0037080 3300048905 Bacteria 4396
119 Ga0496105_0100908 3300048908 Bacteria 2383
120 Ga0496106_0057906 3300048909 Bacteria 2931
121 Ga0496107_0144058 3300048910 Bacteria 1761
122 Ga0496109_0019866 3300048912 Bacteria 5929
123 Ga0496109_0379882 3300048912 Bacteria 1334
124 Ga0496110_0033925 3300048913 Bacteria 4417
125 Ga0496112_0076040 3300048915 Bacteria 3321
126 Ga0496112_0203781 3300048915 Bacteria 1937
127 Ga0496114_0005071 3300048917 Bacteria 10266
128 Ga0496114_0025116 3300048917 Bacteria 4867
129 Ga0496114_0403505 3300048917 Bacteria 1210
130 Ga0496115_0019761 3300048918 Bacteria 5187
131 Ga0501031_0030999 3300049568 Bacteria 3489
132 Ga0501031_0070857 3300049568 Bacteria 2271
133 Ga0501032_0118441 3300049569 Bacteria 1751
134 Ga0501033_0234363 3300049570 Bacteria 1303
135 Ga0501036_0076010 3300049572 Bacteria 2841
136 Ga0501036_0088403 3300049572 Bacteria 2618
137 Ga0501036_0235810 3300049572 Bacteria 1535
138 Ga0501037_0179379 3300049573 Bacteria 1503
139 Ga0501038_0053135 3300049574 Bacteria 3490
140 Ga0501038_0298879 3300049574 Bacteria 1264
141 Ga0501039_0015702 3300049575 Bacteria 5793
142 Ga0501039_0035362 3300049575 Bacteria 3855
143 Ga0501039_0042803 3300049575 Bacteria 3498
144 Ga0501039_0103911 3300049575 Bacteria 2218
145 Ga0501040_0029624 3300049576 Bacteria 3696
146 Ga0501040_0191961 3300049576 Bacteria 1449
147 Ga0501041_0010541 3300049577 Bacteria 5449
148 Ga0501041_0068738 3300049577 Bacteria 2172
149 Ga0501042_0045173 3300049578 Bacteria 3139
150 Ga0501042_0068328 3300049578 Bacteria 2541
151 Ga0501043_0060499 3300049579 Bacteria 2973
152 Ga0501046_0120030 3300049580 Bacteria 2001
153 Ga0501047_0465905 3300049581 Bacteria 1092
154 Ga0501048_0131728 3300049582 Bacteria 1767
155 Ga0501067_0003140 3300049583 Bacteria 9122
156 Ga0501067_0013222 3300049583 Bacteria 4571
157 Ga0501067_0129514 3300049583 Bacteria 1404
158 Ga0501068_0015068 3300049584 Bacteria 4433
159 Ga0501068_0072549 3300049584 Bacteria 2102
160 Ga0501069_0007660 3300049585 Bacteria 5664
161 Ga0501069_0027798 3300049585 Bacteria 3101
162 Ga0501069_0028198 3300049585 Bacteria 3078
163 Ga0501069_0096673 3300049585 Bacteria 1674
164 Ga0501071_0125781 3300049587 Bacteria 1902
165 Ga0501071_0307298 3300049587 Bacteria 1203
166 Ga0501072_0121755 3300049588 Bacteria 2079
167 Ga0501072_0180314 3300049588 Bacteria 1685
168 Ga0501074_0078204 3300049590 Bacteria 2374
169 Ga0501075_0045157 3300049591 Bacteria 3306
170 Ga0501076_0161647 3300049592 Bacteria 1824
171 Ga0501077_0143889 3300049593 Bacteria 1512
172 Ga0501079_0140010 3300049741 Bacteria 1885
173 Ga0501081_0016068 3300049743 Bacteria 4944
174 Ga0501045_0024256 3300049824 Bacteria 4353
175 Ga0501045_0111914 3300049824 Bacteria 2024
176 nmdc:mga03n38_20286_c1 3300050490 Bacteria 2657
177 nmdc:mga03n38_38024_c1 3300050490 Bacteria 2079
178 nmdc:mga03n38_4778_c1 3300050490 Bacteria 4532
179 nmdc:mga00v17_1921_c1 3300050491 Bacteria 10733
180 nmdc:mga00v17_25476_c1 3300050491 Bacteria 3439
181 nmdc:mga00v17_293500_c1 3300050491 Bacteria 1056
182 nmdc:mga00v17_64686_c1 3300050491 Bacteria 2254
183 nmdc:mga0yw44_13990_c1 3300050492 Bacteria 4243
184 nmdc:mga0yw44_16071_c1 3300050492 Bacteria 4033
185 nmdc:mga0yw44_1757_c1 3300050492 Bacteria 8831
186 nmdc:mga0yw44_201186_c1 3300050492 Bacteria 1315
187 nmdc:mga0yw44_22207_c1 3300050492 Bacteria 3554
188 nmdc:mga0yw44_57543_c1 3300050492 Bacteria 2372
189 nmdc:mga0yw44_66544_c1 3300050492 Bacteria 2224
190 nmdc:mga06z11_168344_c1 3300050494 Bacteria 1257
191 nmdc:mga06z11_24685_c1 3300050494 Bacteria 2840
192 nmdc:mga06z11_4067_c1 3300050494 Bacteria 5718
193 nmdc:mga04h51_15142_c1 3300050495 Bacteria 2218
194 nmdc:mga04h51_24172_c1 3300050495 Bacteria 1858
195 nmdc:mga07m45_104714_c1 3300050496 Bacteria 1627
196 nmdc:mga07m45_12388_c1 3300050496 Bacteria 4507
197 nmdc:mga07m45_20748_c1 3300050496 Bacteria 3571
198 nmdc:mga07m45_82558_c1 3300050496 Bacteria 1835
199 Ga0500644_0000053 3300053088 Bacteria 69275
200 Ga0500556_0001035 3300053104 Bacteria 14512
201 Ga0500593_000776 3300053117 Bacteria 11926
202 Ga0500573_0009053 3300053140 Bacteria 5509
203 Ga0501084_0145028 3300054114 Bacteria 1999
204 Ga0501082_0054308 3300060353 Bacteria 3453
205 Ga0466962_0088017 3300061719 Bacteria 1487
206 2643826657 2643221561 Bacteria 4984412
207 2644090152 2643221615 Bacteria 5487866
208 2644098666 2643221617 Bacteria 5139111
209 2644116027 2643221620 Bacteria 5134593
210 2644230581 2643221641 Bacteria 4490190
211 2644319996 2643221657 Bacteria 5490246
212 2644532992 2643221696 Bacteria 5431823
213 2740168000 2739367898 Bacteria 4367674
214 2812333560 2811994874 Bacteria 5367947
215 2855389873 2855386786 Bacteria 4752232
216 2857484108 2857481737 Bacteria 4761446
217 8054613356 8054609563 Bacteria 5170090
218 Ga0466965_0055204
219 Ga0070668_100028291
220 Ga0070667_100033224
221 Ga0070708_100276399
222 Ga0070678_100096981
223 Ga0070662_100148570
224 Ga0070698_100006366
225 Ga0070684_100084157
226 Ga0070665_100515600
227 Ga0068856_100138876
228 Ga0068856_100214414
229 Ga0068860_100023860
230 Ga0075365_10002778
231 Ga0075365_10004729
232 Ga0075365_10021620
233 Ga0075365_10029842
234 Ga0075365_10038764
235 Ga0075365_10104484
236 Ga0075365_10111532
237 Ga0075365_10137350
238 Ga0075365_10194807
239 Ga0075368_10005717
240 Ga0075368_10014821
241 Ga0075363_100013906
242 Ga0075363_100013962
243 Ga0075363_100014686
244 Ga0075364_10019565
245 Ga0075364_10032255
246 Ga0075364_10066921
247 Ga0075364_10101429
248 Ga0075362_10014731
249 Ga0075367_10020923
250 Ga0075367_10025484
251 Ga0075367_10035531
252 Ga0075367_10118007
253 Ga0075370_10008621
254 Ga0075370_10017679
255 Ga0075370_10066473
256 Ga0105245_10119823
257 Ga0114129_10239516
258 Ga0105243_10284744
259 Ga0105249_10102605
260 Ga0105246_10279231
261 Ga0163162_10386547
262 Ga0163163_10374241
263 Ga0163161_10036581
264 Ga0207688_10180164
265 Ga0207657_10043861
266 Ga0207687_10064296
267 Ga0207704_10017553
268 Ga0207661_10203136
269 Ga0207679_10093450
270 Ga0207677_10034930
271 Ga0207639_10363632
272 Ga0207678_10009659
273 Ga0207678_10275949
274 Ga0207702_10138699
275 Ga0207683_10075035
276 Ga0209813_10020637
277 Ga0268264_10000510
278 Ga0307513_10066596
279 Ga0307413_10127222
280 Ga0307410_10019811
281 Ga0307410_10060941
282 Ga0307410_10240369
283 Ga0307407_10021188
284 Ga0307407_10156877
285 Ga0307407_10269677
286 Ga0307409_100034206
287 Ga0307409_100036471
288 Ga0307409_100152325
289 Ga0307409_100540817
290 Ga0307416_100007997
291 Ga0307416_100060492
292 Ga0307416_100332892
293 Ga0307411_10334556
294 Ga0307411_10403025
295 Ga0307415_100025732
296 Ga0395900_0555854
297 Ga0395901_0005983
298 Ga0395901_0057054
299 Ga0395901_0236094
300 Ga0436365_1681270
301 Ga0451837_0189405
302 Ga0451853_2572155
303 Ga0439431_0006656
304 Ga0439446_0035742
305 Ga0466961_0017843
306 Ga0466961_0022503
307 Ga0466961_0090389
308 Ga0466961_0206329
309 Ga0466963_0045880
310 Ga0466963_0155010
311 Ga0466964_0043633
312 Ga0466970_0008827
313 Ga0466970_0012157
314 Ga0466970_0022953
315 Ga0466970_0023150
316 Ga0466957_0010011
317 Ga0466957_0011755
318 Ga0466957_0178842
319 Ga0466957_0236494
320 Ga0466960_0006233
321 Ga0466960_0006743
322 Ga0466960_0011488
323 Ga0466960_0013618
324 Ga0466960_0064674
325 Ga0466958_0160388
326 Ga0466967_0099038
327 Ga0466967_0114199
328 Ga0495629_0050312
329 Ga0495664_0011540
330 Ga0495585_0061678
331 Ga0495600_0178287
332 Ga0496100_0204075
333 Ga0496100_0313125
334 Ga0496101_0011492
335 Ga0496102_0037080
336 Ga0496105_0100908
337 Ga0496106_0057906
338 Ga0496107_0144058
339 Ga0496109_0019866
340 Ga0496109_0379882
341 Ga0496110_0033925
342 Ga0496112_0076040
343 Ga0496112_0203781
344 Ga0496114_0005071
345 Ga0496114_0025116
346 Ga0496114_0403505
347 Ga0496115_0019761
348 Ga0501031_0030999
349 Ga0501031_0070857
350 Ga0501032_0118441
351 Ga0501033_0234363
352 Ga0501036_0076010
353 Ga0501036_0088403
354 Ga0501036_0235810
355 Ga0501037_0179379
356 Ga0501038_0053135
357 Ga0501038_0298879
358 Ga0501039_0015702
359 Ga0501039_0035362
360 Ga0501039_0042803
361 Ga0501039_0103911
362 Ga0501040_0029624
363 Ga0501040_0191961
364 Ga0501041_0010541
365 Ga0501041_0068738
366 Ga0501042_0045173
367 Ga0501042_0068328
368 Ga0501043_0060499
369 Ga0501046_0120030
370 Ga0501047_0465905
371 Ga0501048_0131728
372 Ga0501067_0003140
373 Ga0501067_0013222
374 Ga0501067_0129514
375 Ga0501068_0015068
376 Ga0501068_0072549
377 Ga0501069_0007660
378 Ga0501069_0027798
379 Ga0501069_0028198
380 Ga0501069_0096673
381 Ga0501071_0125781
382 Ga0501071_0307298
383 Ga0501072_0121755
384 Ga0501072_0180314
385 Ga0501074_0078204
386 Ga0501075_0045157
387 Ga0501076_0161647
388 Ga0501077_0143889
389 Ga0501079_0140010
390 Ga0501081_0016068
391 Ga0501045_0024256
392 Ga0501045_0111914
393 nmdc:mga03n38_20286_c1
394 nmdc:mga03n38_38024_c1
395 nmdc:mga03n38_4778_c1
396 nmdc:mga00v17_1921_c1
397 nmdc:mga00v17_25476_c1
398 nmdc:mga00v17_293500_c1
399 nmdc:mga00v17_64686_c1
400 nmdc:mga0yw44_13990_c1
401 nmdc:mga0yw44_16071_c1
402 nmdc:mga0yw44_1757_c1
403 nmdc:mga0yw44_201186_c1
404 nmdc:mga0yw44_22207_c1
405 nmdc:mga0yw44_57543_c1
406 nmdc:mga0yw44_66544_c1
407 nmdc:mga06z11_168344_c1
408 nmdc:mga06z11_24685_c1
409 nmdc:mga06z11_4067_c1
410 nmdc:mga04h51_15142_c1
411 nmdc:mga04h51_24172_c1
412 nmdc:mga07m45_104714_c1
413 nmdc:mga07m45_12388_c1
414 nmdc:mga07m45_20748_c1
415 nmdc:mga07m45_82558_c1
416 Ga0500644_0000053
417 Ga0500556_0001035
418 Ga0500593_000776
419 Ga0500573_0009053
420 Ga0501084_0145028
421 Ga0501082_0054308
422 Ga0466962_0088017
423 2643826657
424 2644090152
425 2644098666
426 2644116027
427 2644230581
428 2644319996
429 2644532992
430 2740168000
431 2812333560
432 2855389873
433 2857484108
434 8054613356

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00950

ABC-3

ABC 3 transport family

8

268

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
7kyp-assembly4.cif.gz_N psabc from streptococcus pneumoniae in complex with fab 0.8614 6 278
7kyo-assembly1.cif.gz_C-2 psabc from streptococcus pneumoniae in complex with fab 0.8492 13 269
7kyp-assembly4.cif.gz_N psabc from streptococcus pneumoniae in complex with fab 0.8442 6 278
7kyo-assembly1.cif.gz_C-2 psabc from streptococcus pneumoniae in complex with fab 0.8282 13 269
5b57-assembly1.cif.gz_B inward-facing conformation of abc heme importer bhuuv from burkholderia cenocepacia 0.8096 7 267
ID Description Score Start End Superfamily
af_P39832_7_260_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.9436 18 269 1.10.3470.10
af_Q2G2D9_6_271_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.9196 9 276 1.10.3470.10
af_P39832_7_260_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.9187 18 269 1.10.3470.10
af_Q2G2D9_6_271_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.9066 9 276 1.10.3470.10
af_Q2FY18_5_276_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.891 10 279 1.10.3470.10
ID Description Score Start End GO Terms
AF-A0A7V9J0W1-F1-model_v4 Metal ABC transporter permease 0.9731 15 282 GO:0010043
GO:0043190
GO:0055085
AF-A0A7W0L5P2-F1-model_v4 Metal ABC transporter permease 0.9691 8 189 GO:0010043
GO:0043190
GO:0055085
AF-A0A2H0L3W3-F1-model_v4 ABC transporter 0.9629 7 271 GO:0010043
GO:0043190
GO:0055085
AF-A0A3D2JRV4-F1-model_v4 Metal ABC transporter permease 0.9626 8 244 GO:0010043
GO:0043190
GO:0055085
AF-A0A7V9J0W1-F1-model_v4 Metal ABC transporter permease 0.9622 15 282 GO:0010043
GO:0043190
GO:0055085

Map