F328673

General Info

Members Datasets Scaffolds Average Seq Length
217 163 213 269

Family's Representative Sequence

Representative Sequence 3300007076|Ga0075435_100091524|Ga0075435_1000915242
Length 315
Sequence MTALSRRRSCLGQPWFERTIFAMLDIASHTLVPAEPLAMDTPSLPVLGDKSAMRALLVGDRIDTMALERDATLPTVSTLPLAVRAGVNGIAVVFRYGVVVFVGLTPAEENEFLKAVRSRITGPFRAREREEETAQIEVSAEREDQIPPGGPIYVKDMALERLLLVAYALADSVVLARDEREVSSVFDTLEPFARELAEHGRTPGGRRAILKHIGNALLVQHRVSGRVAVAEDPDVLWDRPDLSRLYSRLKDEYELKERVDGLSRKLAVISETAQALTDMIDTQRSLRLEVLIVALIAFEIAITFYQMYAASGAGH

Samples

Sample ID Description Type Environment
1 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule
2 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
3 2902330777 Methylobacterium sp. 2A Isolate Unclassified
4 2928125067 Methylobacterium sp. 1973 Isolate Unclassified
5 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
19 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
23 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
24 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
25 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
26 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
27 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
28 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
29 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
30 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
31 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
32 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
33 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
34 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
38 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
39 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
40 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
41 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
42 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
43 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
44 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
45 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
46 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
57 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
58 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
59 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
60 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
61 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
62 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
63 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
64 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
65 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
66 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
67 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
68 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
69 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
70 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
71 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
72 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
73 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
74 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
75 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
76 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
77 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
78 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
79 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
80 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
81 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
82 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
83 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
84 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
85 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
86 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
87 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
88 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
89 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
90 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
91 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
92 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
93 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
94 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
95 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
96 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
97 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
98 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
99 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
100 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
101 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
102 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
103 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
104 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
105 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
106 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
107 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
108 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
109 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
110 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
111 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
112 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
113 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
114 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
115 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
116 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
117 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
118 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
119 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
120 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
121 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
122 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
123 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
124 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
125 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
126 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
127 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
128 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
129 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
130 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
131 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
132 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
133 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
134 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
135 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
136 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
148 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
149 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
151 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
152 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
153 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
154 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
155 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
156 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
157 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
158 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
159 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
160 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
161 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
162 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
163 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.16
Metatranscriptomes 0
Isolates 1.84

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.07
Nodule 0.46
Rhizoplane 11.98
Rhizosphere 74.65
Stem 0
Stem Tuber 0
Unclassified 7.83

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065165_1017662 3300005262 Bacteria 2617
2 Ga0070668_100017982 3300005347 Bacteria 5303
3 Ga0070674_100476249 3300005356 Bacteria 1035
4 Ga0070667_100007734 3300005367 Bacteria 8911
5 Ga0070709_10009101 3300005434 Bacteria 5465
6 Ga0070714_100079836 3300005435 Bacteria 2845
7 Ga0070714_100155295 3300005435 Bacteria 2065
8 Ga0070713_100003044 3300005436 Bacteria 11015
9 Ga0070711_100306411 3300005439 Bacteria 1265
10 Ga0070711_100598881 3300005439 Bacteria 919
11 Ga0070663_100055718 3300005455 Bacteria 2831
12 Ga0070707_100677318 3300005468 Unclassified 994
13 Ga0070698_100036581 3300005471 Bacteria 5070
14 Ga0070679_100130082 3300005530 Bacteria 2498
15 Ga0068853_100154521 3300005539 Bacteria 2067
16 Ga0070695_100102322 3300005545 Bacteria 1931
17 Ga0070693_100217206 3300005547 Unclassified 1251
18 Ga0068855_100364851 3300005563 Bacteria 1589
19 Ga0068856_100345776 3300005614 Bacteria 1506
20 Ga0068860_100000626 3300005843 Bacteria 41822
21 Ga0068860_100000651 3300005843 Bacteria 40516
22 Ga0081539_10050322 3300005985 Bacteria 2358
23 Ga0070717_10011591 3300006028 Bacteria 6701
24 Ga0070717_10219111 3300006028 Bacteria 1672
25 Ga0070715_10048468 3300006163 Bacteria 1816
26 Ga0070716_100021320 3300006173 Bacteria 3412
27 Ga0070712_100025834 3300006175 Bacteria 3907
28 Ga0070712_100029012 3300006175 Bacteria 3707
29 Ga0070712_100197890 3300006175 Bacteria 1577
30 Ga0075367_10043511 3300006178 Bacteria 2630
31 Ga0075434_100201042 3300006871 Bacteria 2012
32 Ga0075429_100141811 3300006880 Bacteria 2103
33 Ga0075436_100024324 3300006914 Bacteria 4163
34 Ga0075435_100024799 3300007076 Bacteria 4660
35 Ga0075435_100091524 3300007076 Bacteria 2510
36 Ga0099794_10107732 3300007265 Bacteria 1394
37 Ga0099795_10033923 3300007788 Unclassified 1775
38 Ga0105240_10566297 3300009093 Bacteria 1255
39 Ga0111539_10873907 3300009094 Bacteria 1046
40 Ga0105241_10289471 3300009174 Bacteria 1402
41 Ga0105237_10006596 3300009545 Bacteria 12834
42 Ga0099796_10003867 3300010159 Bacteria 3541
43 Ga0163163_10011954 3300014325 Bacteria 7898
44 Ga0213872_10008065 3300021361 Bacteria 5119
45 Ga0213874_10010410 3300021377 Bacteria 2328
46 Ga0213876_10142369 3300021384 Bacteria 1275
47 Ga0228598_1005032 3300024227 Bacteria 2779
48 Ga0209758_1002267 3300025297 Bacteria 19939
49 Ga0207685_10021907 3300025905 Bacteria 2150
50 Ga0207699_10077356 3300025906 Bacteria 2052
51 Ga0207671_10086099 3300025914 Bacteria 2362
52 Ga0207663_10490508 3300025916 Bacteria 953
53 Ga0207663_10673371 3300025916 Unclassified 818
54 Ga0207700_10039453 3300025928 Bacteria 3438
55 Ga0207700_10179157 3300025928 Bacteria 1773
56 Ga0207664_10034629 3300025929 Bacteria 3890
57 Ga0207665_10015095 3300025939 Bacteria 5072
58 Ga0207639_10236638 3300026041 Bacteria 1586
59 Ga0209179_1011408 3300027512 Bacteria 1574
60 Ga0268264_10000055 3300028381 Bacteria 314947
61 Ga0265337_1001158 3300028556 Bacteria 13458
62 Ga0265334_10001891 3300028573 Bacteria 9922
63 Ga0307517_10087138 3300028786 Bacteria 2597
64 Ga0265338_10024306 3300028800 Bacteria 6194
65 Ga0265332_10000542 3300031238 Bacteria 25657
66 Ga0265328_10000039 3300031239 Bacteria 91183
67 Ga0265328_10050549 3300031239 Bacteria 1526
68 Ga0265325_10044332 3300031241 Bacteria 2317
69 Ga0265329_10015478 3300031242 Bacteria 2664
70 Ga0265340_10008706 3300031247 Bacteria 5475
71 Ga0265339_10001756 3300031249 Bacteria 15968
72 Ga0265331_10002793 3300031250 Bacteria 11583
73 Ga0265331_10003419 3300031250 Bacteria 10272
74 Ga0265331_10008450 3300031250 Bacteria 5856
75 Ga0265327_10000541 3300031251 Bacteria 64650
76 Ga0265327_10012939 3300031251 Bacteria 5584
77 Ga0265316_10002428 3300031344 Bacteria 19366
78 Ga0265316_10043071 3300031344 Bacteria 3602
79 Ga0307508_10217895 3300031616 Bacteria 1509
80 Ga0265314_10238995 3300031711 Bacteria 1049
81 Ga0265342_10000050 3300031712 Bacteria 124639
82 Ga0373923_0266721 3300035111 Bacteria 804
83 Ga0373936_0008162 3300035113 Bacteria 3936
84 Ga0373936_0024795 3300035113 Bacteria 2344
85 Ga0373936_0028686 3300035113 Bacteria 2189
86 Ga0373953_0067494 3300035117 Bacteria 1472
87 Ga0373943_0017999 3300035170 Bacteria 3241
88 Ga0373943_0104067 3300035170 Bacteria 1489
89 Ga0373946_0049576 3300035171 Bacteria 1751
90 Ga0373935_0157141 3300035692 Bacteria 1547
91 Ga0373933_0254440 3300035724 Bacteria 1131
92 Ga0373947_0099327 3300035725 Bacteria 1827
93 Ga0373947_0185452 3300035725 Bacteria 1356
94 Ga0373937_0095703 3300036401 Bacteria 2753
95 Ga0373925_0029709 3300037068 Bacteria 4010
96 Ga0373925_0128138 3300037068 Bacteria 1976
97 Ga0373925_0144952 3300037068 Bacteria 1861
98 Ga0395900_0125462 3300037418 Bacteria 2633
99 Ga0395900_0438595 3300037418 Bacteria 1264
100 Ga0395898_0119154 3300037466 Unclassified 2528
101 Ga0436364_1554814 3300037853 Bacteria 1192
102 Ga0395901_0098265 3300038443 Bacteria 3069
103 Ga0395901_0397565 3300038443 Bacteria 1416
104 Ga0436365_0054192 3300039437 Unclassified 2861
105 Ga0436365_0517324 3300039437 Bacteria 1661
106 Ga0436360_0642800 3300039438 Bacteria 4385
107 Ga0436360_1175691 3300039438 Unclassified 933
108 Ga0436361_0191564 3300039447 Bacteria 4170
109 Ga0436361_1082360 3300039447 Bacteria 2015
110 Ga0436363_0211607 3300039450 Bacteria 1047
111 Ga0436363_1116152 3300039450 Bacteria 2348
112 Ga0436362_1271076 3300039453 Bacteria 1352
113 Ga0436362_1277293 3300039453 Bacteria 1444
114 Ga0466969_0105377 3300044656 Bacteria 1324
115 Ga0466966_0266529 3300044684 Bacteria 1031
116 Ga0466957_0121105 3300044842 Bacteria 1668
117 Ga0466959_0167217 3300045049 Bacteria 1544
118 Ga0495592_0181042 3300046454 Bacteria 1435
119 Ga0495629_0305938 3300046459 Bacteria 1088
120 Ga0495651_0015400 3300046462 Bacteria 5913
121 Ga0495651_0374451 3300046462 Bacteria 935
122 Ga0495582_0262522 3300046473 Bacteria 991
123 Ga0495594_0000381 3300046499 Bacteria 22212
124 Ga0495608_0066125 3300046511 Bacteria 2367
125 Ga0495608_0366376 3300046511 Bacteria 885
126 Ga0495665_0066632 3300046531 Bacteria 1900
127 Ga0495640_0220836 3300046533 Bacteria 1195
128 Ga0495640_0268996 3300046533 Bacteria 1063
129 Ga0495645_0053192 3300046543 Bacteria 2944
130 Ga0495634_0205598 3300046642 Bacteria 1221
131 Ga0495635_0154496 3300046663 Bacteria 1562
132 Ga0495657_0175029 3300046675 Bacteria 1320
133 Ga0495599_0067187 3300046678 Bacteria 2239
134 Ga0495623_0125372 3300046679 Bacteria 1542
135 Ga0495623_0292423 3300046679 Bacteria 903
136 Ga0495669_0006312 3300046684 Bacteria 4950
137 Ga0495581_0278592 3300047315 Bacteria 978
138 Ga0495604_0268433 3300047317 Bacteria 1157
139 Ga0495604_0295476 3300047317 Bacteria 1089
140 Ga0495674_0308122 3300047319 Unclassified 1292
141 Ga0495672_0142206 3300047320 Bacteria 1252
142 Ga0495680_0096224 3300047322 Unclassified 2212
143 Ga0495675_0011220 3300047444 Bacteria 5620
144 Ga0495677_0042488 3300047445 Bacteria 1665
145 Ga0495681_0148529 3300047470 Bacteria 985
146 Ga0495684_0363947 3300047471 Bacteria 1024
147 Ga0495686_0106100 3300047472 Bacteria 1689
148 Ga0495602_0004414 3300048088 Bacteria 14679
149 Ga0496104_0000199 3300048907 Bacteria 53404
150 Ga0496104_0012357 3300048907 Bacteria 7674
151 Ga0496104_0029693 3300048907 Bacteria 5073
152 Ga0496105_0021166 3300048908 Bacteria 5260
153 Ga0496105_0081566 3300048908 Bacteria 2672
154 Ga0496105_0106829 3300048908 Bacteria 2311
155 Ga0496106_0063540 3300048909 Bacteria 2806
156 Ga0496106_0122331 3300048909 Bacteria 2035
157 Ga0496107_0273327 3300048910 Bacteria 1258
158 Ga0496108_0017095 3300048911 Bacteria 5932
159 Ga0496109_0042179 3300048912 Bacteria 4132
160 Ga0496109_0402516 3300048912 Bacteria 1293
161 Ga0496109_0443509 3300048912 Bacteria 1226
162 Ga0496110_0021886 3300048913 Bacteria 5421
163 Ga0496110_0060688 3300048913 Bacteria 3336
164 Ga0496110_0515954 3300048913 Bacteria 1087
165 Ga0496111_0103000 3300048914 Bacteria 2099
166 Ga0496112_0014126 3300048915 Bacteria 7395
167 Ga0496112_0076852 3300048915 Bacteria 3302
168 Ga0496112_0422337 3300048915 Bacteria 1272
169 Ga0496113_0017194 3300048916 Bacteria 5015
170 Ga0496113_0202988 3300048916 Bacteria 1576
171 Ga0496114_0016959 3300048917 Bacteria 5874
172 Ga0496114_0205352 3300048917 Bacteria 1727
173 Ga0496115_0025159 3300048918 Bacteria 4633
174 Ga0496115_0100822 3300048918 Bacteria 2367
175 Ga0496124_0149297 3300048927 Unclassified 1836
176 Ga0496125_0000099 3300048928 Bacteria 203333
177 Ga0496125_0032127 3300048928 Bacteria 4666
178 Ga0496126_0033767 3300048929 Bacteria 4812
179 Ga0496126_0223467 3300048929 Bacteria 1580
180 Ga0501031_0091479 3300049568 Bacteria 1984
181 Ga0501032_0037788 3300049569 Bacteria 3290
182 Ga0501032_0090647 3300049569 Bacteria 2029
183 Ga0501033_0009580 3300049570 Bacteria 7451
184 Ga0501036_0124486 3300049572 Bacteria 2177
185 Ga0501037_0000374 3300049573 Bacteria 37235
186 Ga0501038_0002130 3300049574 Bacteria 18373
187 Ga0501041_0158646 3300049577 Bacteria 1414
188 Ga0501042_0121259 3300049578 Bacteria 1882
189 Ga0501043_0030686 3300049579 Bacteria 4226
190 Ga0501046_0102161 3300049580 Bacteria 2198
191 Ga0501047_0325569 3300049581 Bacteria 1376
192 Ga0501068_0291718 3300049584 Bacteria 1043
193 Ga0501068_0314331 3300049584 Bacteria 1004
194 Ga0501080_0632557 3300049742 Bacteria 948
195 Ga0501035_0038248 3300049822 Bacteria 4345
196 Ga0501044_0123448 3300049823 Bacteria 2588
197 Ga0501044_0133659 3300049823 Bacteria 2473
198 nmdc:mga06z11_32648_c1 3300050494 Bacteria 2540
199 nmdc:mga06r32_593611_c1 3300050510 Bacteria 1079
200 nmdc:mga06r32_639943_c1 3300050510 Bacteria 1032
201 nmdc:mga0n895_274566_c1 3300050512 Unclassified 1709
202 nmdc:mga0n895_298887_c1 3300050512 Bacteria 1632
203 nmdc:mga0rr50_73009_c1 3300050513 Bacteria 2622
204 nmdc:mga08x19_4_c1 3300050514 Bacteria 335979
205 Ga0495601_0043408 3300053077 Bacteria 2823
206 Ga0495612_0029706 3300053078 Bacteria 2202
207 Ga0500583_0011668 3300053092 Bacteria 3323
208 Ga0500651_0035299 3300053093 Bacteria 3152
209 Ga0500595_011132 3300053119 Bacteria 3535
210 Ga0500595_018757 3300053119 Bacteria 2524
211 Ga0500568_0003231 3300053139 Bacteria 9217
212 Ga0500577_0001078 3300053142 Bacteria 7038
213 Ga0500636_0013129 3300053177 Bacteria 4860

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300038443 Ga0395901_0397565 Ga0395901_0397565_748_1386 211
2 3300035111 Ga0373923_0266721 Ga0373923_0266721_126_779 217
3 3300044684 Ga0466966_0266529 Ga0466966_0266529_40_696 217
4 3300037418 Ga0395900_0438595 Ga0395900_0438595_482_1195 236
5 3300005435 Ga0070714_100155295 Ga0070714_1001552952 241
6 3300025928 Ga0207700_10039453 Ga0207700_100394533 241
7 3300035113 Ga0373936_0024795 Ga0373936_0024795_1584_2333 241
8 3300031238 Ga0265332_10000542 Ga0265332_1000054217 251
9 3300031241 Ga0265325_10044332 Ga0265325_100443321 251
10 3300031242 Ga0265329_10015478 Ga0265329_100154781 251
11 3300031247 Ga0265340_10008706 Ga0265340_100087063 251
12 3300031249 Ga0265339_10001756 Ga0265339_1000175611 251
13 3300031250 Ga0265331_10008450 Ga0265331_100084504 251
14 3300031711 Ga0265314_10238995 Ga0265314_102389951 251
15 3300031712 Ga0265342_10000050 Ga0265342_1000005042 251
16 3300045049 Ga0466959_0167217 Ga0466959_0167217_52_813 252
17 3300021361 Ga0213872_10008065 Ga0213872_100080657 253
18 3300039447 Ga0436361_1082360 Ga0436361_1082360_1127_1891 253
19 3300037418 Ga0395900_0125462 Ga0395900_0125462_347_1147 257
20 3300037466 Ga0395898_0119154 Ga0395898_0119154_670_1470 257
21 3300038443 Ga0395901_0098265 Ga0395901_0098265_1372_2172 257
22 3300044656 Ga0466969_0105377 Ga0466969_0105377_177_1022 257
23 3300046642 Ga0495634_0205598 Ga0495634_0205598_12_785 257
24 3300007788 Ga0099795_10033923 Ga0099795_100339231 260
25 3300035113 Ga0373936_0028686 Ga0373936_0028686_180_962 260
26 3300037068 Ga0373925_0144952 Ga0373925_0144952_964_1746 260
27 3300046679 Ga0495623_0292423 Ga0495623_0292423_49_834 260
28 3300048910 Ga0496107_0273327 Ga0496107_0273327_156_941 260
29 3300049568 Ga0501031_0091479 Ga0501031_0091479_929_1714 260
30 3300049569 Ga0501032_0037788 Ga0501032_0037788_1517_2302 260
31 3300049570 Ga0501033_0009580 Ga0501033_0009580_3959_4744 260
32 3300049573 Ga0501037_0000374 Ga0501037_0000374_7978_8763 260
33 3300049577 Ga0501041_0158646 Ga0501041_0158646_484_1269 260
34 3300049578 Ga0501042_0121259 Ga0501042_0121259_903_1688 260
35 3300049579 Ga0501043_0030686 Ga0501043_0030686_2094_2879 260
36 3300049580 Ga0501046_0102161 Ga0501046_0102161_1160_1945 260
37 3300049584 Ga0501068_0291718 Ga0501068_0291718_209_994 260
38 3300049742 Ga0501080_0632557 Ga0501080_0632557_111_896 260
39 3300049822 Ga0501035_0038248 Ga0501035_0038248_3316_4101 260
40 3300049823 Ga0501044_0133659 Ga0501044_0133659_445_1230 260
41 iso_pu_bacteria 2902330777 2902334946 260
42 3300039438 Ga0436360_0642800 Ga0436360_0642800_1895_2686 262
43 3300039447 Ga0436361_0191564 Ga0436361_0191564_3283_4074 262
44 3300039450 Ga0436363_0211607 Ga0436363_0211607_215_1006 262
45 3300039453 Ga0436362_1277293 Ga0436362_1277293_137_928 262
46 3300053093 Ga0500651_0035299 Ga0500651_0035299_112_918 262
47 3300036401 Ga0373937_0095703 Ga0373937_0095703_1873_2664 263
48 3300046679 Ga0495623_0125372 Ga0495623_0125372_17_808 263
49 3300047322 Ga0495680_0096224 Ga0495680_0096224_411_1202 263
50 3300005614 Ga0068856_100345776 Ga0068856_1003457763 264
51 3300006871 Ga0075434_100201042 Ga0075434_1002010422 264
52 3300006880 Ga0075429_100141811 Ga0075429_1001418112 264
53 3300007076 Ga0075435_100024799 Ga0075435_1000247996 264
54 3300024227 Ga0228598_1005032 Ga0228598_10050324 264
55 3300025916 Ga0207663_10673371 Ga0207663_106733711 264
56 3300035117 Ga0373953_0067494 Ga0373953_0067494_91_885 264
57 3300035170 Ga0373943_0104067 Ga0373943_0104067_115_909 264
58 3300035724 Ga0373933_0254440 Ga0373933_0254440_71_865 264
59 3300035725 Ga0373947_0099327 Ga0373947_0099327_120_914 264
60 3300035725 Ga0373947_0185452 Ga0373947_0185452_449_1243 264
61 3300037068 Ga0373925_0029709 Ga0373925_0029709_115_909 264
62 3300046454 Ga0495592_0181042 Ga0495592_0181042_582_1376 264
63 3300046462 Ga0495651_0015400 Ga0495651_0015400_1369_2163 264
64 3300046473 Ga0495582_0262522 Ga0495582_0262522_22_816 264
65 3300046511 Ga0495608_0066125 Ga0495608_0066125_1433_2227 264
66 3300046511 Ga0495608_0366376 Ga0495608_0366376_53_847 264
67 3300046533 Ga0495640_0220836 Ga0495640_0220836_206_1000 264
68 3300046543 Ga0495645_0053192 Ga0495645_0053192_282_1076 264
69 3300046663 Ga0495635_0154496 Ga0495635_0154496_447_1241 264
70 3300046675 Ga0495657_0175029 Ga0495657_0175029_237_1031 264
71 3300046678 Ga0495599_0067187 Ga0495599_0067187_540_1334 264
72 3300047315 Ga0495581_0278592 Ga0495581_0278592_41_835 264
73 3300047317 Ga0495604_0268433 Ga0495604_0268433_18_812 264
74 3300047317 Ga0495604_0295476 Ga0495604_0295476_226_1020 264
75 3300047319 Ga0495674_0308122 Ga0495674_0308122_459_1253 264
76 3300047444 Ga0495675_0011220 Ga0495675_0011220_3984_4778 264
77 3300047471 Ga0495684_0363947 Ga0495684_0363947_201_995 264
78 3300048088 Ga0495602_0004414 Ga0495602_0004414_3135_3929 264
79 3300050510 nmdc:mga06r32_593611_c1 nmdc:mga06r32_593611_c1_178_972 264
80 3300053077 Ga0495601_0043408 Ga0495601_0043408_226_1020 264
81 3300053078 Ga0495612_0029706 Ga0495612_0029706_1238_2032 264
82 iso_pu_bacteria 2513237141 2513892415 264
83 3300005434 Ga0070709_10009101 Ga0070709_100091012 266
84 3300005435 Ga0070714_100079836 Ga0070714_1000798362 266
85 3300005436 Ga0070713_100003044 Ga0070713_1000030442 266
86 3300005439 Ga0070711_100598881 Ga0070711_1005988811 266
87 3300005843 Ga0068860_100000626 Ga0068860_1000006263 266
88 3300006028 Ga0070717_10011591 Ga0070717_100115919 266
89 3300006163 Ga0070715_10048468 Ga0070715_100484682 266
90 3300006175 Ga0070712_100025834 Ga0070712_1000258342 266
91 3300009094 Ga0111539_10873907 Ga0111539_108739071 266
92 3300009174 Ga0105241_10289471 Ga0105241_102894711 266
93 3300009545 Ga0105237_10006596 Ga0105237_100065968 266
94 3300021377 Ga0213874_10010410 Ga0213874_100104102 266
95 3300025905 Ga0207685_10021907 Ga0207685_100219071 266
96 3300025906 Ga0207699_10077356 Ga0207699_100773561 266
97 3300025914 Ga0207671_10086099 Ga0207671_100860991 266
98 3300025916 Ga0207663_10490508 Ga0207663_104905081 266
99 3300025928 Ga0207700_10179157 Ga0207700_101791571 266
100 3300025929 Ga0207664_10034629 Ga0207664_100346295 266
101 3300025939 Ga0207665_10015095 Ga0207665_100150953 266
102 3300039450 Ga0436363_1116152 Ga0436363_1116152_620_1423 266
103 3300048907 Ga0496104_0000199 Ga0496104_0000199_35510_36310 266
104 3300048907 Ga0496104_0012357 Ga0496104_0012357_6179_6979 266
105 3300048908 Ga0496105_0021166 Ga0496105_0021166_1019_1819 266
106 3300048908 Ga0496105_0081566 Ga0496105_0081566_312_1112 266
107 3300048908 Ga0496105_0106829 Ga0496105_0106829_1006_1809 266
108 3300048909 Ga0496106_0063540 Ga0496106_0063540_1529_2329 266
109 3300048909 Ga0496106_0122331 Ga0496106_0122331_1214_2014 266
110 3300048911 Ga0496108_0017095 Ga0496108_0017095_1167_1967 266
111 3300048912 Ga0496109_0042179 Ga0496109_0042179_2488_3291 266
112 3300048912 Ga0496109_0443509 Ga0496109_0443509_270_1070 266
113 3300048913 Ga0496110_0021886 Ga0496110_0021886_1272_2075 266
114 3300048913 Ga0496110_0515954 Ga0496110_0515954_190_990 266
115 3300048914 Ga0496111_0103000 Ga0496111_0103000_248_1051 266
116 3300048915 Ga0496112_0014126 Ga0496112_0014126_2505_3308 266
117 3300048915 Ga0496112_0076852 Ga0496112_0076852_2464_3264 266
118 3300048915 Ga0496112_0422337 Ga0496112_0422337_71_871 266
119 3300048916 Ga0496113_0017194 Ga0496113_0017194_2702_3505 266
120 3300048916 Ga0496113_0202988 Ga0496113_0202988_645_1445 266
121 3300048918 Ga0496115_0025159 Ga0496115_0025159_3658_4458 266
122 3300048928 Ga0496125_0000099 Ga0496125_0000099_114970_115773 266
123 3300048928 Ga0496125_0032127 Ga0496125_0032127_1645_2448 266
124 3300048929 Ga0496126_0033767 Ga0496126_0033767_511_1314 266
125 3300050510 nmdc:mga06r32_639943_c1 nmdc:mga06r32_639943_c1_20_820 266
126 3300050512 nmdc:mga0n895_274566_c1 nmdc:mga0n895_274566_c1_725_1525 266
127 3300006173 Ga0070716_100021320 Ga0070716_1000213205 267
128 3300031616 Ga0307508_10217895 Ga0307508_102178952 267
129 3300046684 Ga0495669_0006312 Ga0495669_0006312_2716_3519 267
130 3300047445 Ga0495677_0042488 Ga0495677_0042488_418_1221 267
131 3300053139 Ga0500568_0003231 Ga0500568_0003231_7209_8015 267
132 3300046531 Ga0495665_0066632 Ga0495665_0066632_179_1015 268
133 3300047472 Ga0495686_0106100 Ga0495686_0106100_340_1149 268
134 3300049581 Ga0501047_0325569 Ga0501047_0325569_376_1185 268
135 3300005367 Ga0070667_100007734 Ga0070667_1000077349 269
136 3300005455 Ga0070663_100055718 Ga0070663_1000557183 269
137 3300025297 Ga0209758_1002267 Ga0209758_10022679 269
138 3300028556 Ga0265337_1001158 Ga0265337_10011583 269
139 3300028573 Ga0265334_10001891 Ga0265334_100018917 269
140 3300028786 Ga0307517_10087138 Ga0307517_100871382 269
141 3300028800 Ga0265338_10024306 Ga0265338_100243065 269
142 3300044842 Ga0466957_0121105 Ga0466957_0121105_307_1119 269
143 3300046462 Ga0495651_0374451 Ga0495651_0374451_48_860 269
144 3300048927 Ga0496124_0149297 Ga0496124_0149297_153_965 269
145 3300053177 Ga0500636_0013129 Ga0500636_0013129_197_1009 269
146 3300005356 Ga0070674_100476249 Ga0070674_1004762492 270
147 3300007265 Ga0099794_10107732 Ga0099794_101077321 270
148 3300021384 Ga0213876_10142369 Ga0213876_101423692 270
149 3300035113 Ga0373936_0008162 Ga0373936_0008162_292_1227 270
150 3300039438 Ga0436360_1175691 Ga0436360_1175691_92_904 270
151 3300046499 Ga0495594_0000381 Ga0495594_0000381_19458_20384 270
152 3300047320 Ga0495672_0142206 Ga0495672_0142206_116_1012 270
153 3300048929 Ga0496126_0223467 Ga0496126_0223467_387_1229 270
154 3300053092 Ga0500583_0011668 Ga0500583_0011668_115_930 270
155 3300053119 Ga0500595_011132 Ga0500595_011132_327_1142 270
156 3300053119 Ga0500595_018757 Ga0500595_018757_83_922 270
157 3300006028 Ga0070717_10219111 Ga0070717_102191111 271
158 3300006175 Ga0070712_100197890 Ga0070712_1001978902 271
159 3300006178 Ga0075367_10043511 Ga0075367_100435114 271
160 3300031239 Ga0265328_10050549 Ga0265328_100505492 271
161 3300031250 Ga0265331_10003419 Ga0265331_100034198 271
162 3300031251 Ga0265327_10012939 Ga0265327_100129395 271
163 3300031344 Ga0265316_10043071 Ga0265316_100430712 271
164 3300035170 Ga0373943_0017999 Ga0373943_0017999_111_926 271
165 3300035171 Ga0373946_0049576 Ga0373946_0049576_647_1462 271
166 3300035692 Ga0373935_0157141 Ga0373935_0157141_234_1049 271
167 3300037068 Ga0373925_0128138 Ga0373925_0128138_176_991 271
168 3300037853 Ga0436364_1554814 Ga0436364_1554814_40_855 271
169 3300039437 Ga0436365_0054192 Ga0436365_0054192_865_1680 271
170 3300039453 Ga0436362_1271076 Ga0436362_1271076_491_1306 271
171 3300046459 Ga0495629_0305938 Ga0495629_0305938_191_1006 271
172 3300046533 Ga0495640_0268996 Ga0495640_0268996_26_841 271
173 3300048907 Ga0496104_0029693 Ga0496104_0029693_2984_3799 271
174 3300048912 Ga0496109_0402516 Ga0496109_0402516_427_1242 271
175 3300048913 Ga0496110_0060688 Ga0496110_0060688_286_1101 271
176 3300048917 Ga0496114_0016959 Ga0496114_0016959_4566_5381 271
177 3300048917 Ga0496114_0205352 Ga0496114_0205352_345_1160 271
178 3300048918 Ga0496115_0100822 Ga0496115_0100822_336_1151 271
179 3300050494 nmdc:mga06z11_32648_c1 nmdc:mga06z11_32648_c1_50_865 271
180 3300005347 Ga0070668_100017982 Ga0070668_1000179822 272
181 3300005843 Ga0068860_100000651 Ga0068860_1000006516 272
182 3300028381 Ga0268264_10000055 Ga0268264_1000005599 272
183 3300031239 Ga0265328_10000039 Ga0265328_100000398 272
184 3300031250 Ga0265331_10002793 Ga0265331_1000279310 272
185 3300031344 Ga0265316_10002428 Ga0265316_1000242812 272
186 3300047470 Ga0495681_0148529 Ga0495681_0148529_43_864 272
187 3300053142 Ga0500577_0001078 Ga0500577_0001078_3924_4745 272
188 3300010159 Ga0099796_10003867 Ga0099796_100038672 273
189 3300005530 Ga0070679_100130082 Ga0070679_1001300824 274
190 3300005539 Ga0068853_100154521 Ga0068853_1001545211 274
191 3300005547 Ga0070693_100217206 Ga0070693_1002172061 274
192 3300005563 Ga0068855_100364851 Ga0068855_1003648512 274
193 3300009093 Ga0105240_10566297 Ga0105240_105662972 274
194 3300026041 Ga0207639_10236638 Ga0207639_102366381 274
195 3300049569 Ga0501032_0090647 Ga0501032_0090647_145_1089 274
196 3300049572 Ga0501036_0124486 Ga0501036_0124486_24_905 274
197 3300049574 Ga0501038_0002130 Ga0501038_0002130_10022_10966 274
198 3300049584 Ga0501068_0314331 Ga0501068_0314331_36_980 274
199 3300031251 Ga0265327_10000541 Ga0265327_100005413 275
200 3300049823 Ga0501044_0123448 Ga0501044_0123448_1612_2559 275
201 3300006175 Ga0070712_100029012 Ga0070712_1000290124 277
202 3300039437 Ga0436365_0517324 Ga0436365_0517324_753_1634 277
203 3300050512 nmdc:mga0n895_298887_c1 nmdc:mga0n895_298887_c1_561_1397 278
204 3300005985 Ga0081539_10050322 Ga0081539_100503222 279
205 3300005471 Ga0070698_100036581 Ga0070698_1000365814 280
206 3300005468 Ga0070707_100677318 Ga0070707_1006773181 281
207 3300005439 Ga0070711_100306411 Ga0070711_1003064111 283
208 iso_pu_bacteria 2595698237 2596376992 283
209 iso_pu_bacteria 2928125067 2928128372 283
210 3300005545 Ga0070695_100102322 Ga0070695_1001023222 286
211 3300006914 Ga0075436_100024324 Ga0075436_1000243247 286
212 3300007076 Ga0075435_100091524 Ga0075435_1000915242 286
213 3300050513 nmdc:mga0rr50_73009_c1 nmdc:mga0rr50_73009_c1_1197_2144 286
214 3300050514 nmdc:mga08x19_4_c1 nmdc:mga08x19_4_c1_218763_219710 286
215 3300014325 Ga0163163_10011954 Ga0163163_100119547 295
216 3300027512 Ga0209179_1011408 Ga0209179_10114082 299
217 3300005262 Ga0065165_1017662 Ga0065165_10176622 305

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02582

DUF155

RMND1/Sif2-Sif3/Mrx10, DUF155

91

263

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
2f6m-assembly1.cif.gz_A structure of a vps23-c:vps28-n subcomplex 0.7243 165 220
2p22-assembly1.cif.gz_B structure of the yeast escrt-i heterotetramer core 0.72 161 213
2f6m-assembly2.cif.gz_C structure of a vps23-c:vps28-n subcomplex 0.6608 165 212
2caz-assembly1.cif.gz_A escrt-i core 0.6455 166 216
1cdw-assembly1.cif.gz_A human tbp core domain complexed with dna 0.6432 46 125
ID Description Score Start End Superfamily
af_C0H4W0_149_331_1.20.58.340 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Magnesium transport protein CorA, transmembrane region 0.7983 132 253 1.20.58.340
af_Q4DLU1_272_467_1.20.58.340 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Magnesium transport protein CorA, transmembrane region 0.7898 142 254 1.20.58.340
af_Q8CI78_227_404_1.20.58.340 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Magnesium transport protein CorA, transmembrane region 0.7817 86 254 1.20.58.340
af_Q9VXQ8_158_352_1.20.58.340 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Magnesium transport protein CorA, transmembrane region 0.7672 137 254 1.20.58.340
af_A0A0R0I031_191_362_1.20.58.340 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Magnesium transport protein CorA, transmembrane region 0.7641 96 254 1.20.58.340
ID Description Score Start End GO Terms
AF-A0A7C8HKD6-F1-model_v4 DUF155 domain-containing protein 0.9449 43 301 GO:0016020
AF-A0A7C2SM57-F1-model_v4 RMD1 family protein 0.9423 43 143
AF-A0A257NNV4-F1-model_v4 DUF155 domain-containing protein 0.9373 46 167
AF-A0A7T9DEA4-F1-model_v4 deleted 0.934 46 298
AF-A0A1Q3JF78-F1-model_v4 deleted 0.9168 39 254

Feature Viewer

pLDDT pTM Quality
79.24 0.7 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map