F328615

General Info

Members Datasets Scaffolds Average Seq Length
217 176 434 313

Family's Representative Sequence

Representative Sequence 3300006048|Ga0075363_100039980|Ga0075363_1000399802
Length 317
Sequence MSLSVTDVDRFEASRYRLQALAYRLLGSVGEAEDAVQETYLRWQAADTGRIEVPEAWLTKVLTNLCLNELTSARARRETYVGQWLPEPLLGGDPMLGPADTAEQRESVSYAVLTLMERLSPNERAVYVLREAFDYPHREIAEILDLTESACQQIYHRAKQHVADDKARRARAETDEAAARQIVEEFLAAATSGDTSSLVRLLTDDAMSVGDGGGKIPARTTPFAGALSVAKFLRGLFKPAQVKRDYAGGRAEMYAWTANGEPAAVAVVDGRVVGIMCLEVTAEGIVAVRNQVNPDKLTRATEQWAAVDHGKPLFLAF

Samples

Sample ID Description Type Environment
1 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
2 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
3 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
4 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
5 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
6 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
7 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
8 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
9 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
10 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
11 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
12 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
13 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
14 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
15 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
16 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
17 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
18 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
19 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
20 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
21 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
22 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
23 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
24 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
25 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
26 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
27 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
28 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
29 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
30 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
31 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
32 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
33 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
34 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
35 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
36 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
37 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
38 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
39 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
40 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
41 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
42 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
43 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
44 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
45 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
46 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
47 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
48 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
49 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
50 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
51 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
52 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
53 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
54 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
55 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
56 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
57 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
58 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
59 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
60 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
61 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
62 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
63 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
64 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
65 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
66 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
67 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
68 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
69 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
70 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
71 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
72 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
73 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
74 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
75 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
76 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
77 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
78 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
79 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
80 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
81 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
82 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
83 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
84 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
85 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
86 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
87 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
88 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
89 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
90 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
95 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
105 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
106 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
107 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
110 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
111 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
112 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
113 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
114 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
115 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
116 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
117 2551306166 Nocardia tenerifensis NBRC 101015 Isolate Rhizosphere
118 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
119 2643221548 Streptomyces sp. Root55 Isolate Unclassified
120 2643221647 Streptomyces sp. Root369 Isolate Unclassified
121 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
122 2643221714 Streptomyces sp. Root264 Isolate Unclassified
123 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
124 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
125 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
126 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
127 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
128 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
129 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
130 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
131 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
132 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
133 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
134 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
135 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
136 2862574272 Streptomyces sp. AcE210 Isolate Nodule
137 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
138 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
139 2867428634 Streptomyces sp. RP5T Isolate Unclassified
140 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
141 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
142 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
143 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
144 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
145 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
146 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
147 2891562705 Microbispora tritici MT50 Isolate Unclassified
148 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
149 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
150 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
151 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
152 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
153 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
154 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
155 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
156 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
157 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
158 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
159 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
160 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
161 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
162 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
163 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
164 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
165 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
166 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
167 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
168 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
169 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
170 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
171 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
172 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
173 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified
174 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified
175 8056054917 Glycomyces luteolus NEAU-A15 Isolate Rhizosphere
176 8056579771 Promicromonospora iranensis UTMC 00792 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 71.43
Metatranscriptomes 0.46
Isolates 28.11

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.76
Nodule 0.92
Rhizoplane 1.38
Rhizosphere 81.57
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075363_100039980 3300006048 Bacteria 2471
2 Ga0006562J51391_1078207 3300003578 Bacteria 1631
3 Ga0075370_10068559 3300006353 Bacteria 2026
4 Ga0105251_10023672 3300009011 Bacteria 3164
5 Ga0105246_10241386 3300011119 Bacteria 1428
6 Ga0183367_1008 3300015688 Bacteria 490626
7 Ga0207713_1021607 3300025735 Bacteria 3080
8 Ga0316183_1132225 3300030742 Bacteria 1637
9 Ga0307513_10000040 3300031456 Bacteria 169846
10 Ga0307508_10005299 3300031616 Bacteria 12298
11 Ga0326468_10000664 3300031889 Bacteria 3540
12 Ga0307416_100248791 3300032002 Bacteria 1728
13 Ga0307415_100330780 3300032126 Bacteria 1275
14 Ga0373931_0143387 3300035691 Bacteria 1386
15 Ga0395900_0053955 3300037418 Bacteria 4138
16 Ga0395898_0028310 3300037466 Bacteria 5616
17 Ga0395905_0227125 3300037471 Bacteria 1746
18 Ga0395901_0049732 3300038443 Bacteria 4356
19 Ga0439436_0005029 3300041404 Bacteria 4049
20 Ga0439439_0031019 3300041406 Bacteria 1361
21 Ga0439466_0040129 3300041411 Bacteria 1566
22 Ga0451845_0456017 3300041501 Bacteria 1202
23 Ga0451853_3991319 3300041512 Bacteria 1393
24 Ga0439433_0001451 3300041999 Bacteria 4900
25 Ga0439433_0006003 3300041999 Bacteria 2611
26 Ga0439449_0000765 3300042007 Bacteria 12356
27 Ga0439449_0003061 3300042007 Bacteria 6514
28 Ga0439449_0027537 3300042007 Bacteria 2121
29 Ga0439455_0008195 3300042012 Bacteria 2234
30 Ga0439457_003480 3300042014 Bacteria 4280
31 Ga0439457_003595 3300042014 Bacteria 4202
32 Ga0439462_0017623 3300042015 Bacteria 1850
33 Ga0450894_000083 3300042131 Bacteria 15369
34 Ga0450898_001214 3300042134 Bacteria 3330
35 Ga0450899_000178 3300042135 Bacteria 6360
36 Ga0450899_001422 3300042135 Bacteria 2674
37 Ga0450903_000413 3300042138 Bacteria 9180
38 Ga0450906_001844 3300042145 Bacteria 4644
39 Ga0439458_0003993 3300042157 Bacteria 3408
40 Ga0466969_0010563 3300044656 Bacteria 4893
41 Ga0466972_0005964 3300044658 Bacteria 6118
42 Ga0466965_0000339 3300044683 Bacteria 15737
43 Ga0466966_0025141 3300044684 Bacteria 3891
44 Ga0466961_0081018 3300044693 Bacteria 2054
45 Ga0466963_0005319 3300044694 Bacteria 7526
46 Ga0466963_0009369 3300044694 Bacteria 5896
47 Ga0466964_0012019 3300044706 Bacteria 3274
48 Ga0466971_0009708 3300044719 Bacteria 4201
49 Ga0466971_0016804 3300044719 Bacteria 3232
50 Ga0466971_0046279 3300044719 Bacteria 1956
51 Ga0466968_0039710 3300044735 Bacteria 1982
52 Ga0466970_0003653 3300044765 Bacteria 7505
53 Ga0466957_0003311 3300044842 Bacteria 8824
54 Ga0466960_0108066 3300044901 Bacteria 1442
55 Ga0466959_0013153 3300045049 Bacteria 5994
56 Ga0466958_0007223 3300045836 Bacteria 6090
57 Ga0466967_0000222 3300045976 Bacteria 24389
58 Ga0466967_0258704 3300045976 Bacteria 1665
59 Ga0495592_0062764 3300046454 Bacteria 2726
60 Ga0495603_0000701 3300046455 Bacteria 18948
61 Ga0495603_0001330 3300046455 Bacteria 14352
62 Ga0495603_0001692 3300046455 Bacteria 12963
63 Ga0495629_0000808 3300046459 Bacteria 25349
64 Ga0495629_0003166 3300046459 Bacteria 12466
65 Ga0495629_0065713 3300046459 Bacteria 2531
66 Ga0495651_0007427 3300046462 Bacteria 8380
67 Ga0495653_0162280 3300046463 Bacteria 1550
68 Ga0495662_0000487 3300046476 Bacteria 18092
69 Ga0495664_0008351 3300046477 Bacteria 5774
70 Ga0495594_0001305 3300046499 Bacteria 12988
71 Ga0495594_0022391 3300046499 Bacteria 3380
72 Ga0495594_0132089 3300046499 Bacteria 1414
73 Ga0495606_0002208 3300046507 Bacteria 23309
74 Ga0495608_0108163 3300046511 Bacteria 1788
75 Ga0495630_0244292 3300046517 Bacteria 1371
76 Ga0495666_0001499 3300046526 Bacteria 11413
77 Ga0495640_0014435 3300046533 Bacteria 5978
78 Ga0495587_0084380 3300046536 Bacteria 1839
79 Ga0495622_0000891 3300046557 Bacteria 16272
80 Ga0495667_0028602 3300046559 Bacteria 3754
81 Ga0495668_0000262 3300046616 Bacteria 74478
82 Ga0495634_0038436 3300046642 Bacteria 3263
83 Ga0495625_0007753 3300046660 Bacteria 9274
84 Ga0495635_0034322 3300046663 Bacteria 3518
85 Ga0495661_0088096 3300046665 Bacteria 1773
86 Ga0495588_0002117 3300046674 Bacteria 8522
87 Ga0495588_0027321 3300046674 Bacteria 2852
88 Ga0495657_0040933 3300046675 Bacteria 3175
89 Ga0495599_0041449 3300046678 Bacteria 2890
90 Ga0495623_0032285 3300046679 Bacteria 3365
91 Ga0495613_0000898 3300046689 Bacteria 22894
92 Ga0495589_0020591 3300046794 Bacteria 3373
93 Ga0495581_0027603 3300047315 Bacteria 3292
94 Ga0495604_0000590 3300047317 Bacteria 31463
95 Ga0495674_0015951 3300047319 Bacteria 7013
96 Ga0495676_0002383 3300047321 Bacteria 16681
97 Ga0495676_0012791 3300047321 Bacteria 7546
98 Ga0495676_0070644 3300047321 Bacteria 2687
99 Ga0495675_0026615 3300047444 Bacteria 3688
100 Ga0495685_005012 3300047447 Bacteria 4308
101 Ga0495685_017330 3300047447 Bacteria 2466
102 Ga0495685_042009 3300047447 Bacteria 1561
103 Ga0495684_0072249 3300047471 Bacteria 2621
104 Ga0495602_0042170 3300048088 Bacteria 4160
105 Ga0495614_0002697 3300048089 Bacteria 7886
106 Ga0495626_0000130 3300048091 Bacteria 95069
107 Ga0496108_0178198 3300048911 Bacteria 1840
108 Ga0496109_0041229 3300048912 Bacteria 4183
109 Ga0496112_0603825 3300048915 Bacteria 1029
110 Ga0501031_0010544 3300049568 Bacteria 6015
111 Ga0501031_0032641 3300049568 Bacteria 3395
112 Ga0501032_0019124 3300049569 Bacteria 4792
113 Ga0501032_0102776 3300049569 Bacteria 1894
114 Ga0501033_0001809 3300049570 Bacteria 18683
115 Ga0501033_0021909 3300049570 Bacteria 4821
116 Ga0501033_0077384 3300049570 Bacteria 2441
117 Ga0501033_0166560 3300049570 Bacteria 1584
118 Ga0501034_0024417 3300049571 Bacteria 6149
119 Ga0501034_0046106 3300049571 Bacteria 4404
120 Ga0501034_0080421 3300049571 Bacteria 3262
121 Ga0501034_0388177 3300049571 Bacteria 1320
122 Ga0501036_0002723 3300049572 Bacteria 13966
123 Ga0501036_0002979 3300049572 Bacteria 13462
124 Ga0501036_0021681 3300049572 Bacteria 5401
125 Ga0501036_0022494 3300049572 Bacteria 5303
126 Ga0501037_0029090 3300049573 Bacteria 4081
127 Ga0501038_0018754 3300049574 Bacteria 6246
128 Ga0501039_0000606 3300049575 Bacteria 25888
129 Ga0501039_0037384 3300049575 Bacteria 3747
130 Ga0501040_0066082 3300049576 Bacteria 2492
131 Ga0501042_0008631 3300049578 Bacteria 6745
132 Ga0501043_0002011 3300049579 Bacteria 17360
133 Ga0501043_0051345 3300049579 Bacteria 3239
134 Ga0501046_0016154 3300049580 Bacteria 6260
135 Ga0501047_0022396 3300049581 Bacteria 6067
136 Ga0501047_0033085 3300049581 Bacteria 4992
137 Ga0501048_0020885 3300049582 Bacteria 4796
138 Ga0501048_0045020 3300049582 Bacteria 3153
139 Ga0501048_0097224 3300049582 Bacteria 2077
140 Ga0501070_0026345 3300049586 Bacteria 4879
141 Ga0501074_0008349 3300049590 Bacteria 7508
142 Ga0501076_0133530 3300049592 Bacteria 2014
143 Ga0501035_0006546 3300049822 Bacteria 10928
144 Ga0501035_0190058 3300049822 Bacteria 1765
145 Ga0501044_0001317 3300049823 Bacteria 29199
146 Ga0501044_0027128 3300049823 Bacteria 6058
147 Ga0501044_0085393 3300049823 Bacteria 3189
148 Ga0501044_0399612 3300049823 Bacteria 1287
149 Ga0501045_0020743 3300049824 Bacteria 4696
150 nmdc:mga03n38_27421_c1 3300050490 Bacteria 2363
151 nmdc:mga06z11_100871_c1 3300050494 Bacteria 1583
152 Ga0495655_0060342 3300053083 Bacteria 1033
153 Ga0500560_000523 3300053107 Bacteria 5418
154 Ga0500614_019463 3300053123 Bacteria 1556
155 Ga0466962_0014905 3300061719 Bacteria 3746
156 Ga0466962_0082021 3300061719 Bacteria 1542
157 2547409875 2547132111 Bacteria 8013147
158 2552111662 2551306166 Bacteria 9731570
159 2585302895 2582581313 Bacteria 10042643
160 2643763071 2643221548 Bacteria 8053412
161 2644267267 2643221647 Bacteria 10741251
162 2644464071 2643221682 Bacteria 6743283
163 2644628291 2643221714 Bacteria 9015452
164 2676478164 2675903058 Bacteria 6822861
165 2785342539 2784746763 Bacteria 9783172
166 2786673987 2786546132 Bacteria 10419719
167 2808916966 2808606375 Bacteria 9466072
168 2812355354 2811994879 Bacteria 9313447
169 2812479989 2811994917 Bacteria 7761064
170 2819697231 2818991463 Bacteria 7948711
171 2827631555 2827628540 Bacteria 6858585
172 2856748683 2856741275 Bacteria 8096094
173 2861522827 2861520306 Bacteria 8348283
174 2862184124 2862178590 Bacteria 8583590
175 2862286280 2862281513 Bacteria 9621493
176 2862294510 2862290372 Bacteria 7471434
177 2862575483 2862574272 Bacteria 10567477
178 2863409576 2863404153 Bacteria 9672205
179 2867306796 2867302475 Bacteria 7087181
180 2867432146 2867428634 Bacteria 9590268
181 2873158476 2873151551 Bacteria 8625867
182 2875395262 2875391855 Bacteria 7600475
183 2880489398 2880489317 Bacteria 7096270
184 2880496318 2880495981 Bacteria 7340502
185 2887480142 2887478801 Bacteria 8972725
186 2891398739 2891395885 Bacteria 9251614
187 2891559249 2891554331 Bacteria 8812224
188 2891568092 2891562705 Bacteria 8039471
189 2895430369 2895427314 Bacteria 13147766
190 2912724112 2912723979 Bacteria 8557534
191 2918504873 2918501144 Bacteria 8668083
192 2935395697 2935390628 Bacteria 7043367
193 2946049596 2946045630 Bacteria 8527308
194 2946076533 2946072368 Bacteria 8999607
195 2947232277 2947224130 Bacteria 9938529
196 2954389836 2954380949 Bacteria 10050426
197 2954681429 2954673503 Bacteria 9685905
198 2954682729 2954682443 Bacteria 9862841
199 2954700806 2954691527 Bacteria 10720516
200 2954706540 2954701450 Bacteria 10834262
201 2954712109 2954711539 Bacteria 10867210
202 2954722052 2954721474 Bacteria 10456478
203 2954739798 2954731030 Bacteria 10243860
204 2954740946 2954740390 Bacteria 10229294
205 2954758621 2954749733 Bacteria 10366972
206 2954759954 2954759201 Bacteria 9358192
207 2966602043 2966598605 Bacteria 7676064
208 2997600089 2997600082 Bacteria 9896405
209 3006486864 3006486233 Bacteria 8157040
210 8001787138 8001781756 Bacteria 9586736
211 8008565194 8008558824 Bacteria 10610750
212 8008578336 8008574985 Bacteria 7815457
213 8048410460 8048406513 Bacteria 8936924
214 8055068185 8055066027 Bacteria 9479577
215 8055176904 8055172936 Bacteria 9305943
216 8056059911 8056054917 Bacteria 5736694
217 8056583464 8056579771 Bacteria 5840325
218 Ga0075363_100039980
219 Ga0006562J51391_1078207
220 Ga0075370_10068559
221 Ga0105251_10023672
222 Ga0105246_10241386
223 Ga0183367_1008
224 Ga0207713_1021607
225 Ga0316183_1132225
226 Ga0307513_10000040
227 Ga0307508_10005299
228 Ga0326468_10000664
229 Ga0307416_100248791
230 Ga0307415_100330780
231 Ga0373931_0143387
232 Ga0395900_0053955
233 Ga0395898_0028310
234 Ga0395905_0227125
235 Ga0395901_0049732
236 Ga0439436_0005029
237 Ga0439439_0031019
238 Ga0439466_0040129
239 Ga0451845_0456017
240 Ga0451853_3991319
241 Ga0439433_0001451
242 Ga0439433_0006003
243 Ga0439449_0000765
244 Ga0439449_0003061
245 Ga0439449_0027537
246 Ga0439455_0008195
247 Ga0439457_003480
248 Ga0439457_003595
249 Ga0439462_0017623
250 Ga0450894_000083
251 Ga0450898_001214
252 Ga0450899_000178
253 Ga0450899_001422
254 Ga0450903_000413
255 Ga0450906_001844
256 Ga0439458_0003993
257 Ga0466969_0010563
258 Ga0466972_0005964
259 Ga0466965_0000339
260 Ga0466966_0025141
261 Ga0466961_0081018
262 Ga0466963_0005319
263 Ga0466963_0009369
264 Ga0466964_0012019
265 Ga0466971_0009708
266 Ga0466971_0016804
267 Ga0466971_0046279
268 Ga0466968_0039710
269 Ga0466970_0003653
270 Ga0466957_0003311
271 Ga0466960_0108066
272 Ga0466959_0013153
273 Ga0466958_0007223
274 Ga0466967_0000222
275 Ga0466967_0258704
276 Ga0495592_0062764
277 Ga0495603_0000701
278 Ga0495603_0001330
279 Ga0495603_0001692
280 Ga0495629_0000808
281 Ga0495629_0003166
282 Ga0495629_0065713
283 Ga0495651_0007427
284 Ga0495653_0162280
285 Ga0495662_0000487
286 Ga0495664_0008351
287 Ga0495594_0001305
288 Ga0495594_0022391
289 Ga0495594_0132089
290 Ga0495606_0002208
291 Ga0495608_0108163
292 Ga0495630_0244292
293 Ga0495666_0001499
294 Ga0495640_0014435
295 Ga0495587_0084380
296 Ga0495622_0000891
297 Ga0495667_0028602
298 Ga0495668_0000262
299 Ga0495634_0038436
300 Ga0495625_0007753
301 Ga0495635_0034322
302 Ga0495661_0088096
303 Ga0495588_0002117
304 Ga0495588_0027321
305 Ga0495657_0040933
306 Ga0495599_0041449
307 Ga0495623_0032285
308 Ga0495613_0000898
309 Ga0495589_0020591
310 Ga0495581_0027603
311 Ga0495604_0000590
312 Ga0495674_0015951
313 Ga0495676_0002383
314 Ga0495676_0012791
315 Ga0495676_0070644
316 Ga0495675_0026615
317 Ga0495685_005012
318 Ga0495685_017330
319 Ga0495685_042009
320 Ga0495684_0072249
321 Ga0495602_0042170
322 Ga0495614_0002697
323 Ga0495626_0000130
324 Ga0496108_0178198
325 Ga0496109_0041229
326 Ga0496112_0603825
327 Ga0501031_0010544
328 Ga0501031_0032641
329 Ga0501032_0019124
330 Ga0501032_0102776
331 Ga0501033_0001809
332 Ga0501033_0021909
333 Ga0501033_0077384
334 Ga0501033_0166560
335 Ga0501034_0024417
336 Ga0501034_0046106
337 Ga0501034_0080421
338 Ga0501034_0388177
339 Ga0501036_0002723
340 Ga0501036_0002979
341 Ga0501036_0021681
342 Ga0501036_0022494
343 Ga0501037_0029090
344 Ga0501038_0018754
345 Ga0501039_0000606
346 Ga0501039_0037384
347 Ga0501040_0066082
348 Ga0501042_0008631
349 Ga0501043_0002011
350 Ga0501043_0051345
351 Ga0501046_0016154
352 Ga0501047_0022396
353 Ga0501047_0033085
354 Ga0501048_0020885
355 Ga0501048_0045020
356 Ga0501048_0097224
357 Ga0501070_0026345
358 Ga0501074_0008349
359 Ga0501076_0133530
360 Ga0501035_0006546
361 Ga0501035_0190058
362 Ga0501044_0001317
363 Ga0501044_0027128
364 Ga0501044_0085393
365 Ga0501044_0399612
366 Ga0501045_0020743
367 nmdc:mga03n38_27421_c1
368 nmdc:mga06z11_100871_c1
369 Ga0495655_0060342
370 Ga0500560_000523
371 Ga0500614_019463
372 Ga0466962_0014905
373 Ga0466962_0082021
374 2547409875
375 2552111662
376 2585302895
377 2643763071
378 2644267267
379 2644464071
380 2644628291
381 2676478164
382 2785342539
383 2786673987
384 2808916966
385 2812355354
386 2812479989
387 2819697231
388 2827631555
389 2856748683
390 2861522827
391 2862184124
392 2862286280
393 2862294510
394 2862575483
395 2863409576
396 2867306796
397 2867432146
398 2873158476
399 2875395262
400 2880489398
401 2880496318
402 2887480142
403 2891398739
404 2891559249
405 2891568092
406 2895430369
407 2912724112
408 2918504873
409 2935395697
410 2946049596
411 2946076533
412 2947232277
413 2954389836
414 2954681429
415 2954682729
416 2954700806
417 2954706540
418 2954712109
419 2954722052
420 2954739798
421 2954740946
422 2954758621
423 2954759954
424 2966602043
425 2997600089
426 3006486864
427 8001787138
428 8008565194
429 8008578336
430 8048410460
431 8055068185
432 8055176904
433 8056059911
434 8056583464

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08281

Sigma70_r4_2

Sigma-70, region 4

109

162

0.96

PF04545

Sigma70_r4

Sigma-70, region 4

115

163

0.94

PF04542

Sigma70_r2

Sigma-70 region 2

11

76

0.87

Map