F328213
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 216 | 186 | 432 | 284 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2932398195|2932401190 |
| Length | 338 |
| Sequence | PAGSAGQDAGAPPIGPGSPEHSPAPVGFIGLGNMGAPIARRLLSWPGGLVVCDVRPEAAEPFVSEGATAATTPAEVARTARLISVTVLDDAQVRDVVEGPDGILRTAAPGTVVAVHSTISDSTAVELAEVCATHGVHLVDAPVSGGAPGAEKGELAVMVGGPREVYEACKPPFALWAAMPVHAGEVGAGTRMKLARNLLHFISFTAAAEASRLAEAAGIDIAKLGRVVRHTDAITGGAGAVMLRETTAPIATDDFWHGVFTHVRGLGEKDLSLALSLGERLQVDLPLGSIALRDLGAGFGVGPGEIARRATAAGDGHDDDSNDNGDINNGDDDDEGAR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 2 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 3 | 3300003578 | Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Unclassified |
| 4 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 6 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 7 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 8 | 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Metagenome | Rhizosphere |
| 9 | 3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Metagenome | Rhizosphere |
| 10 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 14 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 15 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 17 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 19 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 20 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 23 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 24 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 26 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 27 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 28 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 29 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 30 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 31 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 32 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 33 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 34 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 35 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 36 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 37 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 38 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 39 | 3300006058 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 | Metagenome | Rhizosphere |
| 40 | 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Metagenome | Rhizosphere |
| 41 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 42 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 43 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 44 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 45 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 46 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 47 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 53 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 54 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 55 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 56 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 57 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 59 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 60 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 61 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 62 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 63 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 64 | 3300021377 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 | Metagenome | Unclassified |
| 65 | 3300025899 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025905 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 93 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 94 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 95 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 96 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 97 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 98 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 99 | 3300030745 | Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 | Metagenome | Rhizosphere |
| 100 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 101 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 102 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 103 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 104 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 105 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 106 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 107 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 108 | 3300042002 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 | Metagenome | Rhizosphere |
| 109 | 3300042004 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 | Metagenome | Rhizosphere |
| 110 | 3300042006 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 | Metagenome | Rhizosphere |
| 111 | 3300042156 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 | Metagenome | Rhizosphere |
| 112 | 3300042435 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 | Metagenome | Rhizosphere |
| 113 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 114 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 115 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 116 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 117 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 118 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 119 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 120 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 121 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 122 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 123 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300046681 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300047673 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere | Metagenome | Rhizosphere |
| 130 | 3300048089 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere | Metagenome | Rhizosphere |
| 131 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 132 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 133 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 134 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 135 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 136 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 137 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 138 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 139 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 140 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 141 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 142 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 143 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 144 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 145 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 146 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 147 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 148 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 149 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 150 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 151 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 152 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 153 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 154 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 155 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 156 | 3300050489 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation | Metagenome | Endosphere |
| 157 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 158 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 159 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 160 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 161 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 162 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 163 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 164 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 165 | 2932398195 | Dietzia sp. 2505 | Isolate | Rhizosphere |
| 166 | 2523231044 | Gordonia rhizosphera NBRC 16068 | Isolate | Rhizosphere |
| 167 | 2547132424 | Nocardia nova SH22a | Isolate | Unclassified |
| 168 | 2551306166 | Nocardia tenerifensis NBRC 101015 | Isolate | Rhizosphere |
| 169 | 2643221617 | Nocardioides sp. Root79 | Isolate | Unclassified |
| 170 | 2643221620 | Nocardioides sp. Root240 | Isolate | Unclassified |
| 171 | 2643221692 | Nocardia sp. Root136 | Isolate | Unclassified |
| 172 | 2738541308 | Rhodococcus sp. OK551 | Isolate | Unclassified |
| 173 | 2738543005 | Rhodococcus sp. OK519 | Isolate | Unclassified |
| 174 | 2738543011 | Rhodococcus sp. OK611 | Isolate | Unclassified |
| 175 | 2744054611 | Aldersonia kunmingensis DSM 45001 | Isolate | Rhizosphere |
| 176 | 2751185725 | Microbispora sp. NRRL B-24597 | Isolate | Unclassified |
| 177 | 2751185792 | Kitasatospora arboriphila NRRL B-24581 | Isolate | Unclassified |
| 178 | 2773857762 | Nocardioides sp. SAI-095 | Isolate | Unclassified |
| 179 | 2811994874 | Nocardioides sp. SLBN-35 | Isolate | Unclassified |
| 180 | 2811994878 | Nocardioides sp. SLBN-169 | Isolate | Unclassified |
| 181 | 2855386786 | Nocardioides ferulae EGI 63112 | Isolate | Unclassified |
| 182 | 2866552031 | Saccharopolyspora rhizosphaerae H219 | Isolate | Unclassified |
| 183 | 2889300758 | Rhodococcus sp. PvR099 | Isolate | Rhizosphere |
| 184 | 2904535858 | Rhodococcus erythropolis 2017 | Isolate | Unclassified |
| 185 | 2928142448 | Prescottella equi DPS 2018 | Isolate | Unclassified |
| 186 | 2939743619 | Rhodococcus sp. PvR044 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 89.35 |
| Metatranscriptomes | 0.46 |
| Isolates | 10.19 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 4.17 |
| Nodule | 0 |
| Rhizoplane | 3.24 |
| Rhizosphere | 81.02 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25406J46586_10003123 | 3300003203 | Bacteria | 7783 |
| 2 | rootH1_10028018 | 3300003323 | Bacteria | 1219 |
| 3 | Ga0006562J51391_1085894 | 3300003578 | Bacteria | 1718 |
| 4 | Ga0070658_10088798 | 3300005327 | Bacteria | 2545 |
| 5 | Ga0068869_100036778 | 3300005334 | Bacteria | 3477 |
| 6 | Ga0068868_100064990 | 3300005338 | Bacteria | 2897 |
| 7 | Ga0070689_100241489 | 3300005340 | Bacteria | 1487 |
| 8 | Ga0070691_10084552 | 3300005341 | Bacteria | 1558 |
| 9 | Ga0070692_10085008 | 3300005345 | Bacteria | 1711 |
| 10 | Ga0070669_100335677 | 3300005353 | Bacteria | 1224 |
| 11 | Ga0070671_100174567 | 3300005355 | Bacteria | 1818 |
| 12 | Ga0070674_100026782 | 3300005356 | Bacteria | 3770 |
| 13 | Ga0070688_100114292 | 3300005365 | Bacteria | 1799 |
| 14 | Ga0070709_10292835 | 3300005434 | Bacteria | 1187 |
| 15 | Ga0070714_100005497 | 3300005435 | Bacteria | 9672 |
| 16 | Ga0070713_100132984 | 3300005436 | Bacteria | 2195 |
| 17 | Ga0070711_100020666 | 3300005439 | Bacteria | 4247 |
| 18 | Ga0070700_100258169 | 3300005441 | Bacteria | 1253 |
| 19 | Ga0070694_100331524 | 3300005444 | Bacteria | 1174 |
| 20 | Ga0070663_100000704 | 3300005455 | Bacteria | 18056 |
| 21 | Ga0070678_100243416 | 3300005456 | Bacteria | 1505 |
| 22 | Ga0070685_10057474 | 3300005466 | Bacteria | 2264 |
| 23 | Ga0068853_100137239 | 3300005539 | Bacteria | 2193 |
| 24 | Ga0070696_100061862 | 3300005546 | Bacteria | 2619 |
| 25 | Ga0070704_100128678 | 3300005549 | Bacteria | 1958 |
| 26 | Ga0070664_100144059 | 3300005564 | Bacteria | 2100 |
| 27 | Ga0068854_100107981 | 3300005578 | Bacteria | 2095 |
| 28 | Ga0068856_100013638 | 3300005614 | Bacteria | 7862 |
| 29 | Ga0068856_100132536 | 3300005614 | Bacteria | 2497 |
| 30 | Ga0068852_100485382 | 3300005616 | Bacteria | 1228 |
| 31 | Ga0068852_100492230 | 3300005616 | Bacteria | 1220 |
| 32 | Ga0068859_100169886 | 3300005617 | Bacteria | 2261 |
| 33 | Ga0068864_100178165 | 3300005618 | Bacteria | 1942 |
| 34 | Ga0068861_100149031 | 3300005719 | Bacteria | 1918 |
| 35 | Ga0068863_100118091 | 3300005841 | Bacteria | 2528 |
| 36 | Ga0068858_100275116 | 3300005842 | Bacteria | 1603 |
| 37 | Ga0068862_100190833 | 3300005844 | Bacteria | 1843 |
| 38 | Ga0081539_10000179 | 3300005985 | Bacteria | 149126 |
| 39 | Ga0081539_10059061 | 3300005985 | Bacteria | 2113 |
| 40 | Ga0075363_100043984 | 3300006048 | Bacteria | 2364 |
| 41 | Ga0075364_10054425 | 3300006051 | Bacteria | 2617 |
| 42 | Ga0075364_10273112 | 3300006051 | Bacteria | 1150 |
| 43 | Ga0075432_10091609 | 3300006058 | Bacteria | 1113 |
| 44 | Ga0070716_100007937 | 3300006173 | Bacteria | 5254 |
| 45 | Ga0070712_100010496 | 3300006175 | Bacteria | 5847 |
| 46 | Ga0075370_10014866 | 3300006353 | Bacteria | 4158 |
| 47 | Ga0075370_10016403 | 3300006353 | Bacteria | 3986 |
| 48 | Ga0068871_100061350 | 3300006358 | Bacteria | 3071 |
| 49 | Ga0075428_100061367 | 3300006844 | Bacteria | 4117 |
| 50 | Ga0075430_100002545 | 3300006846 | Bacteria | 15206 |
| 51 | Ga0075430_100051109 | 3300006846 | Bacteria | 3484 |
| 52 | Ga0075431_100000604 | 3300006847 | Bacteria | 30340 |
| 53 | Ga0097620_100169875 | 3300006931 | Bacteria | 2261 |
| 54 | Ga0111539_10335162 | 3300009094 | Bacteria | 1761 |
| 55 | Ga0105245_10017536 | 3300009098 | Bacteria | 6249 |
| 56 | Ga0105247_10258039 | 3300009101 | Bacteria | 1194 |
| 57 | Ga0105243_10001649 | 3300009148 | Bacteria | 19357 |
| 58 | Ga0105243_10123924 | 3300009148 | Bacteria | 2183 |
| 59 | Ga0105248_10031260 | 3300009177 | Bacteria | 5950 |
| 60 | Ga0105237_10053917 | 3300009545 | Bacteria | 4031 |
| 61 | Ga0105237_10071885 | 3300009545 | Bacteria | 3453 |
| 62 | Ga0105237_10359167 | 3300009545 | Bacteria | 1461 |
| 63 | Ga0105249_10349303 | 3300009553 | Bacteria | 1498 |
| 64 | Ga0105239_10021969 | 3300010375 | Bacteria | 7033 |
| 65 | Ga0105239_10058444 | 3300010375 | Bacteria | 4232 |
| 66 | Ga0105246_10064085 | 3300011119 | Bacteria | 2566 |
| 67 | Ga0157374_10030722 | 3300013296 | Bacteria | 4880 |
| 68 | Ga0157378_10129319 | 3300013297 | Bacteria | 2336 |
| 69 | Ga0163162_10469450 | 3300013306 | Bacteria | 1390 |
| 70 | Ga0157375_10090069 | 3300013308 | Bacteria | 3125 |
| 71 | Ga0157380_10242966 | 3300014326 | Bacteria | 1624 |
| 72 | Ga0157377_10000892 | 3300014745 | Bacteria | 12459 |
| 73 | Ga0163161_10369230 | 3300017792 | Bacteria | 1144 |
| 74 | Ga0213874_10063006 | 3300021377 | Bacteria | 1166 |
| 75 | Ga0207642_10045489 | 3300025899 | Bacteria | 1949 |
| 76 | Ga0207688_10003152 | 3300025901 | Bacteria | 8997 |
| 77 | Ga0207647_10009472 | 3300025904 | Bacteria | 6917 |
| 78 | Ga0207685_10048602 | 3300025905 | Bacteria | 1626 |
| 79 | Ga0207699_10010207 | 3300025906 | Bacteria | 4703 |
| 80 | Ga0207705_10068809 | 3300025909 | Bacteria | 2564 |
| 81 | Ga0207654_10345905 | 3300025911 | Bacteria | 1023 |
| 82 | Ga0207671_10138541 | 3300025914 | Bacteria | 1873 |
| 83 | Ga0207671_10174114 | 3300025914 | Bacteria | 1672 |
| 84 | Ga0207693_10002311 | 3300025915 | Bacteria | 16577 |
| 85 | Ga0207657_10019836 | 3300025919 | Bacteria | 6371 |
| 86 | Ga0207657_10051362 | 3300025919 | Bacteria | 3583 |
| 87 | Ga0207646_10031041 | 3300025922 | Bacteria | 4839 |
| 88 | Ga0207694_10315486 | 3300025924 | Bacteria | 1289 |
| 89 | Ga0207687_10009913 | 3300025927 | Bacteria | 6238 |
| 90 | Ga0207700_10195071 | 3300025928 | Bacteria | 1703 |
| 91 | Ga0207664_10028419 | 3300025929 | Bacteria | 4249 |
| 92 | Ga0207644_10118399 | 3300025931 | Bacteria | 2013 |
| 93 | Ga0207690_10030350 | 3300025932 | Bacteria | 3447 |
| 94 | Ga0207706_10098614 | 3300025933 | Bacteria | 2570 |
| 95 | Ga0207665_10024225 | 3300025939 | Bacteria | 4001 |
| 96 | Ga0207711_10261911 | 3300025941 | Bacteria | 1589 |
| 97 | Ga0207689_10005569 | 3300025942 | Bacteria | 11244 |
| 98 | Ga0207667_10025746 | 3300025949 | Bacteria | 6436 |
| 99 | Ga0207640_10211473 | 3300025981 | Bacteria | 1478 |
| 100 | Ga0207658_10450927 | 3300025986 | Bacteria | 1139 |
| 101 | Ga0207677_10139274 | 3300026023 | Bacteria | 1855 |
| 102 | Ga0207678_10000040 | 3300026067 | Bacteria | 100102 |
| 103 | Ga0207708_10011368 | 3300026075 | Bacteria | 6629 |
| 104 | Ga0207702_10261361 | 3300026078 | Bacteria | 1630 |
| 105 | Ga0207702_10331619 | 3300026078 | Bacteria | 1451 |
| 106 | Ga0207648_10032137 | 3300026089 | Bacteria | 4637 |
| 107 | Ga0207676_10075809 | 3300026095 | Bacteria | 2715 |
| 108 | Ga0207683_10034677 | 3300026121 | Bacteria | 4386 |
| 109 | Ga0207683_10362150 | 3300026121 | Bacteria | 1332 |
| 110 | Ga0207698_10005756 | 3300026142 | Bacteria | 7691 |
| 111 | Ga0207698_10401187 | 3300026142 | Bacteria | 1310 |
| 112 | Ga0268264_10330067 | 3300028381 | Bacteria | 1445 |
| 113 | Ga0307511_10133643 | 3300030521 | Bacteria | 1485 |
| 114 | Ga0316182_1225582 | 3300030745 | Bacteria | 1613 |
| 115 | Ga0265327_10000128 | 3300031251 | Bacteria | 165601 |
| 116 | Ga0265327_10010613 | 3300031251 | Bacteria | 6449 |
| 117 | Ga0307513_10172442 | 3300031456 | Bacteria | 2039 |
| 118 | Ga0307413_10260635 | 3300031824 | Bacteria | 1292 |
| 119 | Ga0307410_10156949 | 3300031852 | Bacteria | 1701 |
| 120 | Ga0307510_10029000 | 3300033180 | Bacteria | 6307 |
| 121 | Ga0395901_0004622 | 3300038443 | Bacteria | 13894 |
| 122 | Ga0436363_0231776 | 3300039450 | Bacteria | 1172 |
| 123 | Ga0451853_2974042 | 3300041512 | Bacteria | 1354 |
| 124 | Ga0439442_037656 | 3300042002 | Bacteria | 1014 |
| 125 | Ga0439445_0004574 | 3300042004 | Bacteria | 3134 |
| 126 | Ga0439432_013389 | 3300042006 | Bacteria | 2791 |
| 127 | Ga0439446_0046022 | 3300042156 | Bacteria | 1295 |
| 128 | Ga0439434_0008207 | 3300042435 | Bacteria | 3062 |
| 129 | Ga0466965_0025368 | 3300044683 | Bacteria | 2869 |
| 130 | Ga0466965_0039427 | 3300044683 | Bacteria | 2322 |
| 131 | Ga0466966_0028108 | 3300044684 | Bacteria | 3664 |
| 132 | Ga0466966_0184565 | 3300044684 | Bacteria | 1265 |
| 133 | Ga0466966_0189212 | 3300044684 | Bacteria | 1247 |
| 134 | Ga0466961_0013845 | 3300044693 | Bacteria | 5169 |
| 135 | Ga0466961_0055952 | 3300044693 | Bacteria | 2514 |
| 136 | Ga0466963_0004712 | 3300044694 | Bacteria | 7965 |
| 137 | Ga0466963_0237500 | 3300044694 | Bacteria | 1278 |
| 138 | Ga0466971_0013234 | 3300044719 | Bacteria | 3621 |
| 139 | Ga0466970_0002437 | 3300044765 | Bacteria | 8987 |
| 140 | Ga0466960_0000866 | 3300044901 | Bacteria | 10690 |
| 141 | Ga0466960_0032663 | 3300044901 | Bacteria | 2412 |
| 142 | Ga0466959_0006081 | 3300045049 | Bacteria | 8329 |
| 143 | Ga0466959_0016613 | 3300045049 | Bacteria | 5382 |
| 144 | Ga0466958_0002097 | 3300045836 | Bacteria | 9884 |
| 145 | Ga0466958_0031583 | 3300045836 | Bacteria | 3148 |
| 146 | Ga0466967_0141862 | 3300045976 | Bacteria | 2238 |
| 147 | Ga0466967_0145488 | 3300045976 | Bacteria | 2211 |
| 148 | Ga0466967_0402547 | 3300045976 | Bacteria | 1332 |
| 149 | Ga0495580_0234305 | 3300046472 | Bacteria | 1260 |
| 150 | Ga0495662_0050636 | 3300046476 | Bacteria | 2005 |
| 151 | Ga0495594_0054343 | 3300046499 | Bacteria | 2207 |
| 152 | Ga0495668_0006813 | 3300046616 | Bacteria | 7418 |
| 153 | Ga0495647_0063222 | 3300046681 | Bacteria | 1465 |
| 154 | Ga0495581_0126337 | 3300047315 | Bacteria | 1489 |
| 155 | Ga0495593_0009070 | 3300047673 | Bacteria | 5771 |
| 156 | Ga0495614_0082585 | 3300048089 | Bacteria | 1393 |
| 157 | Ga0496101_0111201 | 3300048904 | Bacteria | 2062 |
| 158 | Ga0496103_0062596 | 3300048906 | Bacteria | 2316 |
| 159 | Ga0496106_0076225 | 3300048909 | Bacteria | 2570 |
| 160 | Ga0496107_0054593 | 3300048910 | Bacteria | 2884 |
| 161 | Ga0496108_0001208 | 3300048911 | Bacteria | 20256 |
| 162 | Ga0496110_0341774 | 3300048913 | Bacteria | 1363 |
| 163 | Ga0496113_0159941 | 3300048916 | Bacteria | 1780 |
| 164 | Ga0496125_0017464 | 3300048928 | Bacteria | 6836 |
| 165 | Ga0501032_0002740 | 3300049569 | Bacteria | 13718 |
| 166 | Ga0501033_0393754 | 3300049570 | Bacteria | 967 |
| 167 | Ga0501034_0239058 | 3300049571 | Bacteria | 1763 |
| 168 | Ga0501034_0277600 | 3300049571 | Bacteria | 1615 |
| 169 | Ga0501036_0017438 | 3300049572 | Bacteria | 6003 |
| 170 | Ga0501037_0000592 | 3300049573 | Bacteria | 28402 |
| 171 | Ga0501038_0004313 | 3300049574 | Bacteria | 13220 |
| 172 | Ga0501039_0013209 | 3300049575 | Bacteria | 6312 |
| 173 | Ga0501042_0074585 | 3300049578 | Bacteria | 2428 |
| 174 | Ga0501043_0065271 | 3300049579 | Bacteria | 2858 |
| 175 | Ga0501047_0076594 | 3300049581 | Bacteria | 3219 |
| 176 | Ga0501068_0258418 | 3300049584 | Bacteria | 1111 |
| 177 | Ga0501070_0000168 | 3300049586 | Bacteria | 60303 |
| 178 | Ga0501070_0034971 | 3300049586 | Bacteria | 4199 |
| 179 | Ga0501070_0475992 | 3300049586 | Bacteria | 1005 |
| 180 | Ga0501075_0156987 | 3300049591 | Bacteria | 1735 |
| 181 | Ga0501076_0610138 | 3300049592 | Bacteria | 900 |
| 182 | Ga0501079_0080421 | 3300049741 | Bacteria | 2520 |
| 183 | Ga0501044_0005352 | 3300049823 | Bacteria | 14266 |
| 184 | Ga0501045_0098350 | 3300049824 | Bacteria | 2165 |
| 185 | nmdc:mga03683_14971_c1 | 3300050489 | Bacteria | 2883 |
| 186 | nmdc:mga00v17_61511_c1 | 3300050491 | Bacteria | 1560 |
| 187 | nmdc:mga07m45_115067_c1 | 3300050496 | Bacteria | 1551 |
| 188 | nmdc:mga05p37_270373_c1 | 3300050507 | Bacteria | 2031 |
| 189 | nmdc:mga09592_12512_c1 | 3300050508 | Bacteria | 6914 |
| 190 | nmdc:mga0qj67_2936_c1 | 3300050509 | Bacteria | 12228 |
| 191 | nmdc:mga06r32_32555_c1 | 3300050510 | Bacteria | 4906 |
| 192 | nmdc:mga06r32_60242_c1 | 3300050510 | Bacteria | 3653 |
| 193 | Ga0500616_0038994 | 3300053153 | Bacteria | 2563 |
| 194 | Ga0530510_0139504 | 3300061734 | Bacteria | 1785 |
| 195 | 2932401190 | 2932398195 | Bacteria | 3847976 |
| 196 | 2523387906 | 2523231044 | Bacteria | 6434991 |
| 197 | 2548692607 | 2547132424 | Bacteria | 8348532 |
| 198 | 2552105429 | 2551306166 | Bacteria | 9731570 |
| 199 | 2644099825 | 2643221617 | Bacteria | 5139111 |
| 200 | 2644117431 | 2643221620 | Bacteria | 5134593 |
| 201 | 2644517729 | 2643221692 | Bacteria | 7282860 |
| 202 | 2738886807 | 2738541308 | Bacteria | 7020677 |
| 203 | 2739203980 | 2738543005 | Bacteria | 5278128 |
| 204 | 2739238834 | 2738543011 | Bacteria | 5731169 |
| 205 | 2744953594 | 2744054611 | Bacteria | 5611514 |
| 206 | 2753035777 | 2751185725 | Bacteria | 5740550 |
| 207 | 2753326198 | 2751185792 | Bacteria | 5739090 |
| 208 | 2774392524 | 2773857762 | Bacteria | 5971770 |
| 209 | 2812334668 | 2811994874 | Bacteria | 5367947 |
| 210 | 2812351532 | 2811994878 | Bacteria | 5992952 |
| 211 | 2855389647 | 2855386786 | Bacteria | 4752232 |
| 212 | 2866557190 | 2866552031 | Bacteria | 5824618 |
| 213 | 2889301109 | 2889300758 | Bacteria | 5690814 |
| 214 | 2904540250 | 2904535858 | Bacteria | 6308016 |
| 215 | 2928145714 | 2928142448 | Bacteria | 5288925 |
| 216 | 2939744627 | 2939743619 | Bacteria | 5762299 |
| 217 | JGI25406J46586_10003123 | |||
| 218 | rootH1_10028018 | |||
| 219 | Ga0006562J51391_1085894 | |||
| 220 | Ga0070658_10088798 | |||
| 221 | Ga0068869_100036778 | |||
| 222 | Ga0068868_100064990 | |||
| 223 | Ga0070689_100241489 | |||
| 224 | Ga0070691_10084552 | |||
| 225 | Ga0070692_10085008 | |||
| 226 | Ga0070669_100335677 | |||
| 227 | Ga0070671_100174567 | |||
| 228 | Ga0070674_100026782 | |||
| 229 | Ga0070688_100114292 | |||
| 230 | Ga0070709_10292835 | |||
| 231 | Ga0070714_100005497 | |||
| 232 | Ga0070713_100132984 | |||
| 233 | Ga0070711_100020666 | |||
| 234 | Ga0070700_100258169 | |||
| 235 | Ga0070694_100331524 | |||
| 236 | Ga0070663_100000704 | |||
| 237 | Ga0070678_100243416 | |||
| 238 | Ga0070685_10057474 | |||
| 239 | Ga0068853_100137239 | |||
| 240 | Ga0070696_100061862 | |||
| 241 | Ga0070704_100128678 | |||
| 242 | Ga0070664_100144059 | |||
| 243 | Ga0068854_100107981 | |||
| 244 | Ga0068856_100013638 | |||
| 245 | Ga0068856_100132536 | |||
| 246 | Ga0068852_100485382 | |||
| 247 | Ga0068852_100492230 | |||
| 248 | Ga0068859_100169886 | |||
| 249 | Ga0068864_100178165 | |||
| 250 | Ga0068861_100149031 | |||
| 251 | Ga0068863_100118091 | |||
| 252 | Ga0068858_100275116 | |||
| 253 | Ga0068862_100190833 | |||
| 254 | Ga0081539_10000179 | |||
| 255 | Ga0081539_10059061 | |||
| 256 | Ga0075363_100043984 | |||
| 257 | Ga0075364_10054425 | |||
| 258 | Ga0075364_10273112 | |||
| 259 | Ga0075432_10091609 | |||
| 260 | Ga0070716_100007937 | |||
| 261 | Ga0070712_100010496 | |||
| 262 | Ga0075370_10014866 | |||
| 263 | Ga0075370_10016403 | |||
| 264 | Ga0068871_100061350 | |||
| 265 | Ga0075428_100061367 | |||
| 266 | Ga0075430_100002545 | |||
| 267 | Ga0075430_100051109 | |||
| 268 | Ga0075431_100000604 | |||
| 269 | Ga0097620_100169875 | |||
| 270 | Ga0111539_10335162 | |||
| 271 | Ga0105245_10017536 | |||
| 272 | Ga0105247_10258039 | |||
| 273 | Ga0105243_10001649 | |||
| 274 | Ga0105243_10123924 | |||
| 275 | Ga0105248_10031260 | |||
| 276 | Ga0105237_10053917 | |||
| 277 | Ga0105237_10071885 | |||
| 278 | Ga0105237_10359167 | |||
| 279 | Ga0105249_10349303 | |||
| 280 | Ga0105239_10021969 | |||
| 281 | Ga0105239_10058444 | |||
| 282 | Ga0105246_10064085 | |||
| 283 | Ga0157374_10030722 | |||
| 284 | Ga0157378_10129319 | |||
| 285 | Ga0163162_10469450 | |||
| 286 | Ga0157375_10090069 | |||
| 287 | Ga0157380_10242966 | |||
| 288 | Ga0157377_10000892 | |||
| 289 | Ga0163161_10369230 | |||
| 290 | Ga0213874_10063006 | |||
| 291 | Ga0207642_10045489 | |||
| 292 | Ga0207688_10003152 | |||
| 293 | Ga0207647_10009472 | |||
| 294 | Ga0207685_10048602 | |||
| 295 | Ga0207699_10010207 | |||
| 296 | Ga0207705_10068809 | |||
| 297 | Ga0207654_10345905 | |||
| 298 | Ga0207671_10138541 | |||
| 299 | Ga0207671_10174114 | |||
| 300 | Ga0207693_10002311 | |||
| 301 | Ga0207657_10019836 | |||
| 302 | Ga0207657_10051362 | |||
| 303 | Ga0207646_10031041 | |||
| 304 | Ga0207694_10315486 | |||
| 305 | Ga0207687_10009913 | |||
| 306 | Ga0207700_10195071 | |||
| 307 | Ga0207664_10028419 | |||
| 308 | Ga0207644_10118399 | |||
| 309 | Ga0207690_10030350 | |||
| 310 | Ga0207706_10098614 | |||
| 311 | Ga0207665_10024225 | |||
| 312 | Ga0207711_10261911 | |||
| 313 | Ga0207689_10005569 | |||
| 314 | Ga0207667_10025746 | |||
| 315 | Ga0207640_10211473 | |||
| 316 | Ga0207658_10450927 | |||
| 317 | Ga0207677_10139274 | |||
| 318 | Ga0207678_10000040 | |||
| 319 | Ga0207708_10011368 | |||
| 320 | Ga0207702_10261361 | |||
| 321 | Ga0207702_10331619 | |||
| 322 | Ga0207648_10032137 | |||
| 323 | Ga0207676_10075809 | |||
| 324 | Ga0207683_10034677 | |||
| 325 | Ga0207683_10362150 | |||
| 326 | Ga0207698_10005756 | |||
| 327 | Ga0207698_10401187 | |||
| 328 | Ga0268264_10330067 | |||
| 329 | Ga0307511_10133643 | |||
| 330 | Ga0316182_1225582 | |||
| 331 | Ga0265327_10000128 | |||
| 332 | Ga0265327_10010613 | |||
| 333 | Ga0307513_10172442 | |||
| 334 | Ga0307413_10260635 | |||
| 335 | Ga0307410_10156949 | |||
| 336 | Ga0307510_10029000 | |||
| 337 | Ga0395901_0004622 | |||
| 338 | Ga0436363_0231776 | |||
| 339 | Ga0451853_2974042 | |||
| 340 | Ga0439442_037656 | |||
| 341 | Ga0439445_0004574 | |||
| 342 | Ga0439432_013389 | |||
| 343 | Ga0439446_0046022 | |||
| 344 | Ga0439434_0008207 | |||
| 345 | Ga0466965_0025368 | |||
| 346 | Ga0466965_0039427 | |||
| 347 | Ga0466966_0028108 | |||
| 348 | Ga0466966_0184565 | |||
| 349 | Ga0466966_0189212 | |||
| 350 | Ga0466961_0013845 | |||
| 351 | Ga0466961_0055952 | |||
| 352 | Ga0466963_0004712 | |||
| 353 | Ga0466963_0237500 | |||
| 354 | Ga0466971_0013234 | |||
| 355 | Ga0466970_0002437 | |||
| 356 | Ga0466960_0000866 | |||
| 357 | Ga0466960_0032663 | |||
| 358 | Ga0466959_0006081 | |||
| 359 | Ga0466959_0016613 | |||
| 360 | Ga0466958_0002097 | |||
| 361 | Ga0466958_0031583 | |||
| 362 | Ga0466967_0141862 | |||
| 363 | Ga0466967_0145488 | |||
| 364 | Ga0466967_0402547 | |||
| 365 | Ga0495580_0234305 | |||
| 366 | Ga0495662_0050636 | |||
| 367 | Ga0495594_0054343 | |||
| 368 | Ga0495668_0006813 | |||
| 369 | Ga0495647_0063222 | |||
| 370 | Ga0495581_0126337 | |||
| 371 | Ga0495593_0009070 | |||
| 372 | Ga0495614_0082585 | |||
| 373 | Ga0496101_0111201 | |||
| 374 | Ga0496103_0062596 | |||
| 375 | Ga0496106_0076225 | |||
| 376 | Ga0496107_0054593 | |||
| 377 | Ga0496108_0001208 | |||
| 378 | Ga0496110_0341774 | |||
| 379 | Ga0496113_0159941 | |||
| 380 | Ga0496125_0017464 | |||
| 381 | Ga0501032_0002740 | |||
| 382 | Ga0501033_0393754 | |||
| 383 | Ga0501034_0239058 | |||
| 384 | Ga0501034_0277600 | |||
| 385 | Ga0501036_0017438 | |||
| 386 | Ga0501037_0000592 | |||
| 387 | Ga0501038_0004313 | |||
| 388 | Ga0501039_0013209 | |||
| 389 | Ga0501042_0074585 | |||
| 390 | Ga0501043_0065271 | |||
| 391 | Ga0501047_0076594 | |||
| 392 | Ga0501068_0258418 | |||
| 393 | Ga0501070_0000168 | |||
| 394 | Ga0501070_0034971 | |||
| 395 | Ga0501070_0475992 | |||
| 396 | Ga0501075_0156987 | |||
| 397 | Ga0501076_0610138 | |||
| 398 | Ga0501079_0080421 | |||
| 399 | Ga0501044_0005352 | |||
| 400 | Ga0501045_0098350 | |||
| 401 | nmdc:mga03683_14971_c1 | |||
| 402 | nmdc:mga00v17_61511_c1 | |||
| 403 | nmdc:mga07m45_115067_c1 | |||
| 404 | nmdc:mga05p37_270373_c1 | |||
| 405 | nmdc:mga09592_12512_c1 | |||
| 406 | nmdc:mga0qj67_2936_c1 | |||
| 407 | nmdc:mga06r32_32555_c1 | |||
| 408 | nmdc:mga06r32_60242_c1 | |||
| 409 | Ga0500616_0038994 | |||
| 410 | Ga0530510_0139504 | |||
| 411 | 2932401190 | |||
| 412 | 2523387906 | |||
| 413 | 2548692607 | |||
| 414 | 2552105429 | |||
| 415 | 2644099825 | |||
| 416 | 2644117431 | |||
| 417 | 2644517729 | |||
| 418 | 2738886807 | |||
| 419 | 2739203980 | |||
| 420 | 2739238834 | |||
| 421 | 2744953594 | |||
| 422 | 2753035777 | |||
| 423 | 2753326198 | |||
| 424 | 2774392524 | |||
| 425 | 2812334668 | |||
| 426 | 2812351532 | |||
| 427 | 2855389647 | |||
| 428 | 2866557190 | |||
| 429 | 2889301109 | |||
| 430 | 2904540250 | |||
| 431 | 2928145714 | |||
| 432 | 2939744627 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
PF14833
NAD_binding_11
NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
187
297
0.78
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3qha-assembly1.cif.gz_A | crystal structure of a putative oxidoreductase from mycobacterium avium 104 | 0.982 | 4 | 281 |
| 3qha-assembly1.cif.gz_A | crystal structure of a putative oxidoreductase from mycobacterium avium 104 | 0.968 | 4 | 281 |
| 7r3a-assembly3.cif.gz_H | crystal structure of s-adenosyl-l-homocysteine hydrolase from methanococcus maripaludis in complex with inosine | 0.8369 | 2 | 95 |
| 4oqy-assembly1.cif.gz_B | streptomyces sp. gf3546 imine reductase | 0.8228 | 1 | 273 |
| 8egn-assembly1.cif.gz_B | crystal structure of udp-n-acetylmuramate-l-alanine ligase (udp-n-acetylmuramoyl-l-alanine synthetase, murc) pseudomonas aeruginosa in complex with ligand az-13643701 | 0.8221 | 2 | 63 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3qhaA02 | Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.9872 | 164 | 281 | 1.10.1040.10 |
| 3qhaA02 | Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.979 | 164 | 281 | 1.10.1040.10 |
| af_Q4DFE2_2_165_3.40.50.720 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.9682 | 1 | 162 | 3.40.50.720 |
| 3qhaB01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.9641 | 1 | 162 | 3.40.50.720 |
| af_F1QE62_28_195_3.40.50.720 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.9638 | 3 | 163 | 3.40.50.720 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-P9WNY3-F1-model_v4 | Uncharacterized oxidoreductase Rv0770 (EC 1.1.-.-) | 0.9911 | 2 | 279 |
GO:0016054
GO:0016616 GO:0050661 GO:0051287 |
| AF-A0A7K1UZ06-F1-model_v4 | NAD-binding protein | 0.9899 | 2 | 281 |
GO:0016054
GO:0016616 GO:0050661 GO:0051287 |
| AF-A0A3R8P0W4-F1-model_v4 | NAD(P)-dependent oxidoreductase | 0.9892 | 1 | 281 |
GO:0016054
GO:0016491 GO:0050661 GO:0051287 |
| AF-A0A655A4I0-F1-model_v4 | Dehydrogenase/reductase (EC 1.1.1.-, EC 1.1.1.60) | 0.9883 | 38 | 281 |
GO:0008679
GO:0016054 GO:0050661 GO:0051287 |
| AF-A0A1Q8Y4S7-F1-model_v4 | deleted | 0.988 | 3 | 281 |
|