F327904

General Info

Members Datasets Scaffolds Average Seq Length
216 87 432 299

Family's Representative Sequence

Representative Sequence 3300045051|Ga0451576_0066007|Ga0451576_0066007_2237_3163
Length 308
Sequence MGKARLLIVEDDFDISNMLRIYFAGQGYDVDVALRGSEALEKTRQVMPHLIILDIMLPDIDGYEVCRNLRLSTRTSHIPVIFLTQRDERSDRLRGLEQGADNYITKPFDIEELKLYVQNAIARSERESLTDPQTGLPAGRLIEDELRKMIRQRKGWAIMDIRINNFEPFKDVYGFIAANDVLRFTAMMIGEVMDELGTPNDFIGHAGGDNFIIISTEDAASAVRQRLKSRFKEEVLSHYNFMDRQQGYILAPDETGKIQQTTLMTMALGMVSPSTHVFSDIREITELAAEERRQDASHPSGYAASSGR

Samples

Sample ID Description Type Environment
1 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
7 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
8 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
9 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
10 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
11 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
12 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
13 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
14 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
15 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
16 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
17 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
18 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
19 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
20 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
21 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
22 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
23 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
24 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
25 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
26 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
30 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
31 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
32 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
33 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
42 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
43 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
44 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
45 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
46 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
47 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
48 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
49 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
50 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
51 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
52 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
53 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
54 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
55 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
56 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
57 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
58 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
59 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
60 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
61 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
62 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
63 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
64 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
65 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
66 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
67 3300049520 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_B_7_drought Metagenome Rhizosphere
68 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
69 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
70 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
71 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
73 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
74 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
75 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
76 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
77 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
78 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
79 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
80 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
81 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
82 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
83 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
84 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
85 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
86 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
87 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.07
Metatranscriptomes 0.93
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 99.54
Stem 0
Stem Tuber 0
Unclassified 3.24

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0451576_0066007 3300045051 Bacteria 3767
2 SwRhRL2b_contig_1662820 2162886007 Bacteria 13559
3 Ga0065704_10070436 3300005289 Bacteria 24901
4 Ga0065704_10090868 3300005289 Bacteria 2758
5 Ga0065707_10005771 3300005295 Bacteria 3071
6 Ga0065707_10081813 3300005295 Bacteria 36984
7 Ga0065707_10083172 3300005295 Bacteria 10121
8 Ga0065707_10083192 3300005295 Bacteria 10070
9 Ga0065707_10091501 3300005295 Bacteria 3926
10 Ga0070689_100195166 3300005340 Bacteria 1650
11 Ga0070706_100029636 3300005467 Bacteria 5042
12 Ga0070706_100098271 3300005467 Bacteria 2720
13 Ga0070707_100006505 3300005468 Bacteria 10849
14 Ga0070707_100085899 3300005468 Bacteria 3042
15 Ga0070707_100157231 3300005468 Bacteria 2214
16 Ga0070698_100002370 3300005471 Bacteria 20791
17 Ga0070698_100013655 3300005471 Bacteria 8600
18 Ga0070699_100006613 3300005518 Bacteria 10080
19 Ga0070699_100136564 3300005518 Bacteria 2163
20 Ga0070697_100097665 3300005536 Bacteria 2437
21 Ga0070695_100048735 3300005545 Bacteria 2710
22 Ga0070695_100096998 3300005545 Bacteria 1979
23 Ga0070696_100045202 3300005546 Bacteria 3051
24 Ga0070702_100318826 3300005615 Bacteria 1082
25 Ga0068859_100017279 3300005617 Bacteria 7245
26 Ga0068859_100024664 3300005617 Bacteria 6035
27 Ga0068864_100178203 3300005618 Bacteria 1942
28 Ga0068864_100592751 3300005618 Bacteria 1075
29 Ga0068870_10136214 3300005840 Bacteria 1432
30 Ga0068858_100552171 3300005842 Bacteria 1115
31 Ga0068862_100077285 3300005844 Bacteria 2882
32 Ga0068862_100097998 3300005844 Bacteria 2560
33 Ga0081539_10001161 3300005985 Bacteria 47662
34 Ga0081539_10006506 3300005985 Bacteria 11168
35 Ga0075427_10002598 3300006194 Bacteria 2438
36 Ga0075428_100006139 3300006844 Bacteria 13370
37 Ga0075428_100012871 3300006844 Bacteria 9310
38 Ga0075428_100047180 3300006844 Bacteria 4732
39 Ga0075430_100018976 3300006846 Bacteria 5851
40 Ga0075430_100352219 3300006846 Bacteria 1216
41 Ga0075430_100417706 3300006846 Bacteria 1107
42 Ga0075431_100031277 3300006847 Bacteria 5482
43 Ga0075433_10028887 3300006852 Bacteria 4718
44 Ga0075433_10365297 3300006852 Bacteria 1275
45 Ga0075433_10394285 3300006852 Bacteria 1221
46 Ga0075429_100055496 3300006880 Bacteria 3446
47 Ga0075429_100087018 3300006880 Bacteria 2723
48 Ga0075429_100149430 3300006880 Bacteria 2045
49 Ga0075429_100158282 3300006880 Bacteria 1983
50 Ga0097620_100017279 3300006931 Bacteria 7245
51 Ga0097620_100024663 3300006931 Bacteria 6035
52 Ga0111539_10029970 3300009094 Bacteria 6618
53 Ga0114129_10001409 3300009147 Bacteria 32415
54 Ga0114129_10003228 3300009147 Bacteria 22877
55 Ga0114129_10006964 3300009147 Bacteria 16086
56 Ga0114129_10011686 3300009147 Bacteria 12495
57 Ga0114129_10014119 3300009147 Bacteria 11377
58 Ga0114129_10041274 3300009147 Bacteria 6503
59 Ga0114129_10060602 3300009147 Bacteria 5291
60 Ga0114129_10145029 3300009147 Bacteria 3253
61 Ga0105243_10004321 3300009148 Bacteria 11254
62 Ga0105243_10341258 3300009148 Bacteria 1372
63 Ga0105242_10095130 3300009176 Bacteria 2514
64 Ga0105249_10052492 3300009553 Bacteria 3723
65 Ga0105249_10092217 3300009553 Bacteria 2836
66 Ga0105246_10042538 3300011119 Bacteria 3077
67 Ga0207646_10121022 3300025922 Bacteria 2351
68 Ga0207670_10074876 3300025936 Bacteria 2351
69 Ga0207712_10173267 3300025961 Bacteria 1688
70 Ga0207708_10314876 3300026075 Bacteria 1276
71 Ga0207676_10047555 3300026095 Bacteria 3326
72 Ga0207674_10247051 3300026116 Bacteria 1731
73 Ga0207674_10273010 3300026116 Bacteria 1638
74 Ga0207675_100007640 3300026118 Bacteria 10209
75 Ga0268265_10067488 3300028380 Bacteria 2769
76 Ga0268265_10120627 3300028380 Bacteria 2159
77 Ga0268265_10262854 3300028380 Bacteria 1535
78 Ga0265334_10008853 3300028573 Bacteria 4275
79 Ga0265318_10002292 3300028577 Bacteria 10289
80 Ga0265318_10039376 3300028577 Bacteria 1804
81 Ga0265323_10040843 3300028653 Bacteria 1686
82 Ga0265320_10022372 3300031240 Bacteria 3383
83 Ga0265340_10000742 3300031247 Bacteria 18517
84 Ga0265331_10006881 3300031250 Bacteria 6642
85 Ga0265327_10017083 3300031251 Bacteria 4571
86 Ga0265316_10026609 3300031344 Bacteria 4807
87 Ga0316575_10012066 3300031665 Bacteria 3207
88 Ga0316579_10000584 3300031691 Bacteria 12219
89 Ga0316579_10042421 3300031691 Bacteria 2113
90 Ga0316579_10084557 3300031691 Bacteria 1513
91 Ga0316576_10030218 3300031727 Bacteria 3835
92 Ga0316576_10186390 3300031727 Bacteria 1565
93 Ga0316578_10011216 3300031728 Bacteria 4679
94 Ga0316578_10186887 3300031728 Bacteria 1248
95 Ga0316577_10004266 3300031733 Bacteria 7356
96 Ga0307416_100460965 3300032002 Bacteria 1326
97 Ga0307411_10038414 3300032005 Bacteria 3020
98 Ga0316593_10050030 3300032168 Bacteria 1409
99 Ga0316593_10053553 3300032168 Bacteria 1367
100 Ga0373940_0029548 3300035088 Bacteria 1453
101 Ga0373961_0020747 3300035241 Bacteria 1741
102 Ga0316574_0000330 3300035398 Bacteria 18169
103 Ga0316574_0006605 3300035398 Bacteria 6284
104 Ga0316574_0026126 3300035398 Bacteria 3510
105 Ga0316582_0003572 3300036647 Bacteria 7656
106 Ga0316582_0037133 3300036647 Bacteria 3018
107 Ga0316582_0179062 3300036647 Bacteria 1442
108 Ga0316582_0419373 3300036647 Bacteria 922
109 Ga0316584_0002812 3300036712 Bacteria 11153
110 Ga0316584_0061137 3300036712 Bacteria 2821
111 Ga0316584_0072532 3300036712 Bacteria 2581
112 Ga0316584_0122627 3300036712 Bacteria 1942
113 Ga0316584_0213422 3300036712 Unclassified 1420
114 Ga0316584_0333822 3300036712 Bacteria 1091
115 Ga0316581_0000951 3300037588 Bacteria 6167
116 Ga0316581_0019516 3300037588 Bacteria 1978
117 Ga0400487_47917 3300039110 Bacteria 1208
118 Ga0451577_0056779 3300042876 Bacteria 3492
119 Ga0451577_0283124 3300042876 Bacteria 1502
120 Ga0451577_0357358 3300042876 Bacteria 1325
121 Ga0451577_0396383 3300042876 Unclassified 1253
122 Ga0451577_0442841 3300042876 Bacteria 1180
123 Ga0453683_0018334 3300044673 Bacteria 4493
124 Ga0453683_0020571 3300044673 Bacteria 4216
125 Ga0453683_0054388 3300044673 Bacteria 2505
126 Ga0453683_0092179 3300044673 Bacteria 1899
127 Ga0453683_0164828 3300044673 Bacteria 1402
128 Ga0453683_0212504 3300044673 Bacteria 1229
129 Ga0453683_0235936 3300044673 Bacteria 1164
130 Ga0453684_0000012 3300044712 Bacteria 1062512
131 Ga0453684_0000023 3300044712 Bacteria 857153
132 Ga0453684_0000162 3300044712 Bacteria 298154
133 Ga0453684_0000627 3300044712 Bacteria 128570
134 Ga0453684_0001029 3300044712 Bacteria 89157
135 Ga0453684_0001219 3300044712 Bacteria 78962
136 Ga0453684_0001517 3300044712 Bacteria 65158
137 Ga0453684_0002649 3300044712 Bacteria 42723
138 Ga0453684_0005654 3300044712 Bacteria 24568
139 Ga0453684_0012754 3300044712 Bacteria 13798
140 Ga0453684_0013135 3300044712 Bacteria 13506
141 Ga0453684_0014283 3300044712 Bacteria 12734
142 Ga0453684_0014545 3300044712 Bacteria 12566
143 Ga0453684_0014626 3300044712 Bacteria 12526
144 Ga0453684_0025815 3300044712 Bacteria 8514
145 Ga0453684_0034187 3300044712 Bacteria 7064
146 Ga0453684_0035394 3300044712 Bacteria 6902
147 Ga0453684_0037663 3300044712 Bacteria 6634
148 Ga0453684_0040978 3300044712 Bacteria 6274
149 Ga0453684_0050655 3300044712 Bacteria 5458
150 Ga0453684_0056592 3300044712 Bacteria 5086
151 Ga0453684_0085418 3300044712 Bacteria 3921
152 Ga0453684_0108101 3300044712 Bacteria 3386
153 Ga0453684_0110303 3300044712 Bacteria 3344
154 Ga0453684_0132787 3300044712 Bacteria 2985
155 Ga0453684_0144911 3300044712 Bacteria 2831
156 Ga0453684_0148315 3300044712 Bacteria 2791
157 Ga0453684_0148441 3300044712 Bacteria 2789
158 Ga0453684_0158870 3300044712 Bacteria 2676
159 Ga0453684_0185332 3300044712 Bacteria 2440
160 Ga0453684_0187240 3300044712 Bacteria 2424
161 Ga0453684_0208579 3300044712 Bacteria 2273
162 Ga0453684_0229450 3300044712 Bacteria 2144
163 Ga0453684_0438707 3300044712 Bacteria 1456
164 Ga0453684_0438899 3300044712 Bacteria 1455
165 Ga0453684_0441438 3300044712 Bacteria 1450
166 Ga0453684_0591684 3300044712 Bacteria 1217
167 Ga0451576_0000676 3300045051 Bacteria 69445
168 Ga0451576_0010374 3300045051 Bacteria 10696
169 Ga0451576_0011005 3300045051 Bacteria 10331
170 Ga0451576_0022199 3300045051 Bacteria 6886
171 Ga0451576_0137780 3300045051 Bacteria 2545
172 Ga0451576_0235165 3300045051 Bacteria 1913
173 Ga0451576_0293872 3300045051 Bacteria 1699
174 Ga0451576_0345095 3300045051 Bacteria 1559
175 Ga0501297_005883 3300049520 Bacteria 1295
176 Ga0501298_012218 3300049521 Bacteria 1503
177 Ga0501036_0340401 3300049572 Bacteria 1253
178 Ga0501039_0087734 3300049575 Bacteria 2424
179 Ga0501040_0398511 3300049576 Bacteria 988
180 Ga0501071_0146219 3300049587 Bacteria 1762
181 Ga0501071_0204284 3300049587 Bacteria 1485
182 Ga0501072_0112632 3300049588 Unclassified 2166
183 Ga0501072_0113427 3300049588 Bacteria 2158
184 Ga0501074_0137702 3300049590 Unclassified 1746
185 Ga0501075_0002186 3300049591 Bacteria 12936
186 Ga0501075_0014746 3300049591 Bacteria 5601
187 Ga0501076_0006363 3300049592 Bacteria 8562
188 Ga0501076_0089593 3300049592 Bacteria 2473
189 Ga0501076_0289924 3300049592 Bacteria 1341
190 Ga0501079_0023663 3300049741 Unclassified 4714
191 Ga0501045_0186052 3300049824 Bacteria 1548
192 Ga0501045_0416701 3300049824 Bacteria 999
193 nmdc:mga05p37_11211_c1 3300050507 Bacteria 10656
194 nmdc:mga05p37_155790_c1 3300050507 Bacteria 2792
195 nmdc:mga05p37_23695_c1 3300050507 Bacteria 7453
196 nmdc:mga05p37_27604_c1 3300050507 Bacteria 6913
197 nmdc:mga05p37_337160_c1 3300050507 Bacteria 1779
198 nmdc:mga05p37_75294_c1 3300050507 Bacteria 4155
199 nmdc:mga05p37_82610_c1 3300050507 Bacteria 3959
200 nmdc:mga09592_104216_c1 3300050508 Bacteria 2431
201 nmdc:mga09592_2553_c1 3300050508 Bacteria 14736
202 nmdc:mga09592_71735_c1 3300050508 Bacteria 2940
203 nmdc:mga09592_85315_c1 3300050508 Bacteria 2694
204 nmdc:mga0qj67_18269_c1 3300050509 Bacteria 5343
205 nmdc:mga0qj67_398234_c1 3300050509 Bacteria 1111
206 nmdc:mga06r32_70111_c1 3300050510 Bacteria 3389
207 nmdc:mga06r32_94730_c1 3300050510 Bacteria 2922
208 nmdc:mga0n895_507129_c1 3300050512 Bacteria 1215
209 nmdc:mga0a205_25716_c1 3300050515 Bacteria 5610
210 nmdc:mga0a205_296655_c1 3300050515 Bacteria 1490
211 nmdc:mga0a205_302078_c1 3300050515 Bacteria 1473
212 nmdc:mga0a205_362432_c1 3300050515 Bacteria 1316
213 Ga0501084_0056000 3300054114 Unclassified 3299
214 Ga0501084_0116306 3300054114 Bacteria 2248
215 Ga0501082_0042653 3300060353 Unclassified 3911
216 Ga0530510_0230985 3300061734 Bacteria 1376
217 Ga0451576_0066007
218 SwRhRL2b_contig_1662820
219 Ga0065704_10070436
220 Ga0065704_10090868
221 Ga0065707_10005771
222 Ga0065707_10081813
223 Ga0065707_10083172
224 Ga0065707_10083192
225 Ga0065707_10091501
226 Ga0070689_100195166
227 Ga0070706_100029636
228 Ga0070706_100098271
229 Ga0070707_100006505
230 Ga0070707_100085899
231 Ga0070707_100157231
232 Ga0070698_100002370
233 Ga0070698_100013655
234 Ga0070699_100006613
235 Ga0070699_100136564
236 Ga0070697_100097665
237 Ga0070695_100048735
238 Ga0070695_100096998
239 Ga0070696_100045202
240 Ga0070702_100318826
241 Ga0068859_100017279
242 Ga0068859_100024664
243 Ga0068864_100178203
244 Ga0068864_100592751
245 Ga0068870_10136214
246 Ga0068858_100552171
247 Ga0068862_100077285
248 Ga0068862_100097998
249 Ga0081539_10001161
250 Ga0081539_10006506
251 Ga0075427_10002598
252 Ga0075428_100006139
253 Ga0075428_100012871
254 Ga0075428_100047180
255 Ga0075430_100018976
256 Ga0075430_100352219
257 Ga0075430_100417706
258 Ga0075431_100031277
259 Ga0075433_10028887
260 Ga0075433_10365297
261 Ga0075433_10394285
262 Ga0075429_100055496
263 Ga0075429_100087018
264 Ga0075429_100149430
265 Ga0075429_100158282
266 Ga0097620_100017279
267 Ga0097620_100024663
268 Ga0111539_10029970
269 Ga0114129_10001409
270 Ga0114129_10003228
271 Ga0114129_10006964
272 Ga0114129_10011686
273 Ga0114129_10014119
274 Ga0114129_10041274
275 Ga0114129_10060602
276 Ga0114129_10145029
277 Ga0105243_10004321
278 Ga0105243_10341258
279 Ga0105242_10095130
280 Ga0105249_10052492
281 Ga0105249_10092217
282 Ga0105246_10042538
283 Ga0207646_10121022
284 Ga0207670_10074876
285 Ga0207712_10173267
286 Ga0207708_10314876
287 Ga0207676_10047555
288 Ga0207674_10247051
289 Ga0207674_10273010
290 Ga0207675_100007640
291 Ga0268265_10067488
292 Ga0268265_10120627
293 Ga0268265_10262854
294 Ga0265334_10008853
295 Ga0265318_10002292
296 Ga0265318_10039376
297 Ga0265323_10040843
298 Ga0265320_10022372
299 Ga0265340_10000742
300 Ga0265331_10006881
301 Ga0265327_10017083
302 Ga0265316_10026609
303 Ga0316575_10012066
304 Ga0316579_10000584
305 Ga0316579_10042421
306 Ga0316579_10084557
307 Ga0316576_10030218
308 Ga0316576_10186390
309 Ga0316578_10011216
310 Ga0316578_10186887
311 Ga0316577_10004266
312 Ga0307416_100460965
313 Ga0307411_10038414
314 Ga0316593_10050030
315 Ga0316593_10053553
316 Ga0373940_0029548
317 Ga0373961_0020747
318 Ga0316574_0000330
319 Ga0316574_0006605
320 Ga0316574_0026126
321 Ga0316582_0003572
322 Ga0316582_0037133
323 Ga0316582_0179062
324 Ga0316582_0419373
325 Ga0316584_0002812
326 Ga0316584_0061137
327 Ga0316584_0072532
328 Ga0316584_0122627
329 Ga0316584_0213422
330 Ga0316584_0333822
331 Ga0316581_0000951
332 Ga0316581_0019516
333 Ga0400487_47917
334 Ga0451577_0056779
335 Ga0451577_0283124
336 Ga0451577_0357358
337 Ga0451577_0396383
338 Ga0451577_0442841
339 Ga0453683_0018334
340 Ga0453683_0020571
341 Ga0453683_0054388
342 Ga0453683_0092179
343 Ga0453683_0164828
344 Ga0453683_0212504
345 Ga0453683_0235936
346 Ga0453684_0000012
347 Ga0453684_0000023
348 Ga0453684_0000162
349 Ga0453684_0000627
350 Ga0453684_0001029
351 Ga0453684_0001219
352 Ga0453684_0001517
353 Ga0453684_0002649
354 Ga0453684_0005654
355 Ga0453684_0012754
356 Ga0453684_0013135
357 Ga0453684_0014283
358 Ga0453684_0014545
359 Ga0453684_0014626
360 Ga0453684_0025815
361 Ga0453684_0034187
362 Ga0453684_0035394
363 Ga0453684_0037663
364 Ga0453684_0040978
365 Ga0453684_0050655
366 Ga0453684_0056592
367 Ga0453684_0085418
368 Ga0453684_0108101
369 Ga0453684_0110303
370 Ga0453684_0132787
371 Ga0453684_0144911
372 Ga0453684_0148315
373 Ga0453684_0148441
374 Ga0453684_0158870
375 Ga0453684_0185332
376 Ga0453684_0187240
377 Ga0453684_0208579
378 Ga0453684_0229450
379 Ga0453684_0438707
380 Ga0453684_0438899
381 Ga0453684_0441438
382 Ga0453684_0591684
383 Ga0451576_0000676
384 Ga0451576_0010374
385 Ga0451576_0011005
386 Ga0451576_0022199
387 Ga0451576_0137780
388 Ga0451576_0235165
389 Ga0451576_0293872
390 Ga0451576_0345095
391 Ga0501297_005883
392 Ga0501298_012218
393 Ga0501036_0340401
394 Ga0501039_0087734
395 Ga0501040_0398511
396 Ga0501071_0146219
397 Ga0501071_0204284
398 Ga0501072_0112632
399 Ga0501072_0113427
400 Ga0501074_0137702
401 Ga0501075_0002186
402 Ga0501075_0014746
403 Ga0501076_0006363
404 Ga0501076_0089593
405 Ga0501076_0289924
406 Ga0501079_0023663
407 Ga0501045_0186052
408 Ga0501045_0416701
409 nmdc:mga05p37_11211_c1
410 nmdc:mga05p37_155790_c1
411 nmdc:mga05p37_23695_c1
412 nmdc:mga05p37_27604_c1
413 nmdc:mga05p37_337160_c1
414 nmdc:mga05p37_75294_c1
415 nmdc:mga05p37_82610_c1
416 nmdc:mga09592_104216_c1
417 nmdc:mga09592_2553_c1
418 nmdc:mga09592_71735_c1
419 nmdc:mga09592_85315_c1
420 nmdc:mga0qj67_18269_c1
421 nmdc:mga0qj67_398234_c1
422 nmdc:mga06r32_70111_c1
423 nmdc:mga06r32_94730_c1
424 nmdc:mga0n895_507129_c1
425 nmdc:mga0a205_25716_c1
426 nmdc:mga0a205_296655_c1
427 nmdc:mga0a205_302078_c1
428 nmdc:mga0a205_362432_c1
429 Ga0501084_0056000
430 Ga0501084_0116306
431 Ga0501082_0042653
432 Ga0530510_0230985

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00072

Response_reg

Response regulator receiver domain

6

118

0.95

PF00990

GGDEF

Diguanylate cyclase, GGDEF domain

128

260

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
8fk2-assembly1.cif.gz_B the n-terminal vicr from streptococcus mutans 0.9758 4 125
6ifh-assembly1.cif.gz_A unphosphorylated spo0f from paenisporosarcina sp. tg-14 0.9719 4 122
6rh1-assembly1.cif.gz_C revisiting ph-gated conformational switch. complex hk853-rr468 d53a ph 7 0.9708 3 121
2a9r-assembly1.cif.gz_A-2 rr02-rec phosphate in the active site 0.9707 5 124
1nxt-assembly1.cif.gz_A-2 micarec ph 4.0 0.9706 5 124
ID Description Score Start End Superfamily
af_Q2FXN6_3_86_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9845 5 89 3.40.50.2300
af_P9WGN1_2_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9814 4 84 3.40.50.2300
af_Q54SP4_555_700_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9799 3 127 3.40.50.2300
af_O69730_8_88_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9786 4 84 3.40.50.2300
af_P0AFJ5_1_84_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9769 3 84 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A6G8FJS9-F1-model_v4 Response regulator transcription factor 0.9828 3 124 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A2N0KKA9-F1-model_v4 DNA-binding response regulator 0.9797 1 124 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A7S1MUQ3-F1-model_v4 OmpR-like protein 0.9796 3 125 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A0U1D709-F1-model_v4 Two component transcriptional regulator TrcR 0.9767 3 125 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0016020
GO:0032993
AF-A0A1V5QUW8-F1-model_v4 Chemotaxis protein CheY 0.9753 3 122 GO:0000160

Map