F327706

General Info

Members Datasets Scaffolds Average Seq Length
216 165 432 838

Family's Representative Sequence

Representative Sequence 3300028666|Ga0265336_10006429|Ga0265336_100064292
Length 1011
Sequence MSSNRRQYPFHLIEPKWQKAWDAQQAFRAFNPGEEIPANHPFAARHKLSGKVAASQLPPKFYILDMFPYPSGAGLHVGHPEGYTATDILARYKFGLPAEQYAVKTGQHPRKTTEENIATFKRQIKSLGFSYDWSREIATTDPDYFKWTQWIFLKLYNSWFNPDTRKAESVEILYDVMSENPKRSWVKGEYGEYLSGLHNGFVATPVENRAAFKRKQIDEHRLAYVSKAPVNWCPELGTVLANEEVIDGKSEVGGFPVIRKSMRQWMLRITAYAEKLLADLDTIDWSDSLKEMQRNWIGRSEGATVKFQIDIPGPDRLSMAVFTTRPDTLFGATYMVVAPEHWLVDNILAAANHNYRVNDQITSSTVRIFGDGNVETVTLADALATAKAGGVDLIEVNPNVNPPACMLQDYGKHCFYKQGGSKQVTAIQDYRTQVARKSDLERTELAKEKTGVFTGAYAINPVNGEKIPIWIADYVLASYGTGAIMAVPAHDTRDFEFATKFKLPIVQVVQPPNPKTDWHGFVDDGTSVNSTGPEISITGLPTPEAKKKITAWLEEKNLGKKTINYKLRDWLFSRQRYWGEPFPIVWKKGASGNLYHEALPENSLPVLPPTLEDYKPTADGQPPLARARDWLNLPDGSVRETNTMPQWAGSCWYYLRYLDPKNSSAFVGRDVENYWMSGRDGVSPSQTSSKSGKAARCPSQGVDLYVGGTEHAVLHLLYARFWHKVLFDLGCVSTPEPFYKLVNQGMVLGEDNQKMSKSRGNVIPVDVPVAEVGTDALRLYEMFMGPLEMVKPWSTKGVEGVYRFLGRVWRLFVDENSETEFEQQETTAKTPSCQELLNLIKLNSAIKDVAATPAHLKTLHACIKKVTEDLDGMRFNTAISALMVFINDAITWETKPVSVLREFLILLQPFAPHLAEELWQKLSVHGPQSAVALSYAPWPKFDPALLVESEIEIPVQVNGKLRDVIKVPANAGDATIEAAAKASEKVQLFISGKTVKKVIIVPKRLVNLIAQ

Samples

Sample ID Description Type Environment
1 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
2 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
24 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
25 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
26 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
30 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
31 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
34 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
35 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
36 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
37 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
38 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
39 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
40 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
41 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
42 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
44 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
45 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
46 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
47 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
48 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
52 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
53 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
57 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
58 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
59 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
60 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
61 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
62 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027364 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027378 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027395 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027424 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S PM (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027462 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes) (version 2) Metagenome Rhizosphere
86 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
88 3300027552 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes) (version 2) Metagenome Rhizosphere
89 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027617 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes) (version 2) Metagenome Rhizosphere
91 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
94 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
95 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
98 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
99 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
100 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
101 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
102 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
103 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
104 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
105 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
106 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
107 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
108 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
109 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
110 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
111 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
112 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
113 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
114 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
115 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
116 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
117 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
118 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
119 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
120 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
121 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
122 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
123 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
124 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
125 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
126 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
127 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
128 3300049514 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A25_B_5_drought Metagenome Rhizosphere
129 3300049520 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_B_7_drought Metagenome Rhizosphere
130 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
136 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
137 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
138 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
139 3300049651 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_A_0_drought Metagenome Rhizosphere
140 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
141 3300049653 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control Metagenome Rhizosphere
142 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
143 3300049672 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_A_3_drought Metagenome Rhizosphere
144 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
145 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
146 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
147 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
148 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
149 3300049767 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A15_B_4_drought Metagenome Rhizosphere
150 3300049769 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_B_4_drought Metagenome Rhizosphere
151 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
152 3300049778 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control Metagenome Rhizosphere
153 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
154 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
156 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
157 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
158 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
159 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
160 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
161 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
162 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
163 2718217752 Candidatus Xiphinematobacter sp. Idaho Grape Isolate Unclassified
164 2786546548 Spartobacteria bacterium LR76 Isolate Unclassified
165 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.61
Metatranscriptomes 0
Isolates 1.39

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.24
Nodule 0
Rhizoplane 2.31
Rhizosphere 92.59
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265336_10006429 3300028666 Bacteria 4235
2 JGI25405J52794_10000108 3300003911 Bacteria 9499
3 JGI25405J52794_10000193 3300003911 Bacteria 7817
4 Ga0065712_10069732 3300005290 Bacteria 6789
5 Ga0065715_10000562 3300005293 Bacteria 10422
6 Ga0065715_10003537 3300005293 Bacteria 3965
7 Ga0065715_10091353 3300005293 Bacteria 5851
8 Ga0065707_10011168 3300005295 Bacteria 5296
9 Ga0070683_100001630 3300005329 Bacteria 17370
10 Ga0070670_100024912 3300005331 Bacteria 5148
11 Ga0068869_100002977 3300005334 Bacteria 10294
12 Ga0070680_100001251 3300005336 Bacteria 18348
13 Ga0068868_100049389 3300005338 Bacteria 3301
14 Ga0070691_10002102 3300005341 Bacteria 8816
15 Ga0070661_100012150 3300005344 Bacteria 6021
16 Ga0070671_100069250 3300005355 Bacteria 2943
17 Ga0070674_100002447 3300005356 Bacteria 10276
18 Ga0070688_100022778 3300005365 Bacteria 3676
19 Ga0070659_100013532 3300005366 Bacteria 6074
20 Ga0070714_100040749 3300005435 Bacteria 3916
21 Ga0070700_100000593 3300005441 Bacteria 18118
22 Ga0070694_100037286 3300005444 Bacteria 3224
23 Ga0070662_100019361 3300005457 Bacteria 4620
24 Ga0070662_100062401 3300005457 Bacteria 2723
25 Ga0070681_10018996 3300005458 Bacteria 6879
26 Ga0068867_100001525 3300005459 Bacteria 16058
27 Ga0070706_100000561 3300005467 Bacteria 43329
28 Ga0070707_100002233 3300005468 Bacteria 18498
29 Ga0070707_100008093 3300005468 Bacteria 9753
30 Ga0070707_100064702 3300005468 Bacteria 3511
31 Ga0070698_100001957 3300005471 Bacteria 22869
32 Ga0070699_100010782 3300005518 Bacteria 7910
33 Ga0070679_100013738 3300005530 Bacteria 7756
34 Ga0070684_100019454 3300005535 Bacteria 5617
35 Ga0070697_100012869 3300005536 Bacteria 6554
36 Ga0070697_100051360 3300005536 Bacteria 3349
37 Ga0070686_100019256 3300005544 Bacteria 4018
38 Ga0070686_100030338 3300005544 Bacteria 3297
39 Ga0070695_100017585 3300005545 Bacteria 4337
40 Ga0070665_100016081 3300005548 Bacteria 7508
41 Ga0070664_100000099 3300005564 Bacteria 55715
42 Ga0068857_100042896 3300005577 Bacteria 4013
43 Ga0068856_100004883 3300005614 Bacteria 13277
44 Ga0068856_100020194 3300005614 Bacteria 6470
45 Ga0081455_10001181 3300005937 Bacteria 32682
46 Ga0081455_10001521 3300005937 Bacteria 28596
47 Ga0081455_10003837 3300005937 Bacteria 17144
48 Ga0081455_10006748 3300005937 Bacteria 12253
49 Ga0081455_10023893 3300005937 Bacteria 5677
50 Ga0081455_10029948 3300005937 Bacteria 4955
51 Ga0081540_1001585 3300005983 Bacteria 19444
52 Ga0081539_10027666 3300005985 Bacteria 3585
53 Ga0070717_10003704 3300006028 Bacteria 10984
54 Ga0070717_10005474 3300006028 Bacteria 9266
55 Ga0075432_10002311 3300006058 Bacteria 6343
56 Ga0075366_10019072 3300006195 Bacteria 3964
57 Ga0097621_100039516 3300006237 Bacteria 3790
58 Ga0068871_100012815 3300006358 Bacteria 6205
59 Ga0068871_100017581 3300006358 Bacteria 5415
60 Ga0068871_100017997 3300006358 Bacteria 5361
61 Ga0075430_100015413 3300006846 Bacteria 6507
62 Ga0075433_10031667 3300006852 Bacteria 4522
63 Ga0075429_100014955 3300006880 Bacteria 6732
64 Ga0068865_100002342 3300006881 Bacteria 11170
65 Ga0075436_100018460 3300006914 Bacteria 4775
66 Ga0111539_10034180 3300009094 Bacteria 6168
67 Ga0114129_10018578 3300009147 Bacteria 9898
68 Ga0114129_10031857 3300009147 Bacteria 7453
69 Ga0105243_10001503 3300009148 Bacteria 20405
70 Ga0105242_10001091 3300009176 Bacteria 21338
71 Ga0105237_10110478 3300009545 Bacteria 2741
72 Ga0105249_10011867 3300009553 Bacteria 7660
73 Ga0105239_10031180 3300010375 Bacteria 5865
74 Ga0157374_10034255 3300013296 Bacteria 4637
75 Ga0157374_10037544 3300013296 Bacteria 4447
76 Ga0157378_10002076 3300013297 Bacteria 17924
77 Ga0157378_10031041 3300013297 Bacteria 4719
78 Ga0157378_10036007 3300013297 Bacteria 4380
79 Ga0157372_10018935 3300013307 Bacteria 7409
80 Ga0157375_10012510 3300013308 Bacteria 7532
81 Ga0163163_10031464 3300014325 Bacteria 5121
82 Ga0157376_10016858 3300014969 Bacteria 5557
83 Ga0157376_10040486 3300014969 Bacteria 3809
84 Ga0207697_10003168 3300025315 Bacteria 8194
85 Ga0207697_10005922 3300025315 Bacteria 5609
86 Ga0207693_10014814 3300025915 Bacteria 6264
87 Ga0207693_10038970 3300025915 Bacteria 3741
88 Ga0207663_10001957 3300025916 Bacteria 9742
89 Ga0207657_10000780 3300025919 Bacteria 33829
90 Ga0207652_10033349 3300025921 Bacteria 4335
91 Ga0207646_10000115 3300025922 Bacteria 110424
92 Ga0207646_10057203 3300025922 Bacteria 3484
93 Ga0207664_10040893 3300025929 Bacteria 3609
94 Ga0207644_10063950 3300025931 Bacteria 2673
95 Ga0207706_10000859 3300025933 Bacteria 31271
96 Ga0207686_10011432 3300025934 Bacteria 4861
97 Ga0207665_10009877 3300025939 Bacteria 6262
98 Ga0207665_10031725 3300025939 Bacteria 3497
99 Ga0207691_10000418 3300025940 Bacteria 42581
100 Ga0207691_10021823 3300025940 Bacteria 6043
101 Ga0207661_10015464 3300025944 Bacteria 5615
102 Ga0207667_10052410 3300025949 Bacteria 4297
103 Ga0207708_10000244 3300026075 Bacteria 42958
104 Ga0207702_10015097 3300026078 Bacteria 6404
105 Ga0207702_10089943 3300026078 Bacteria 2685
106 Ga0207648_10001094 3300026089 Bacteria 30360
107 Ga0207674_10055387 3300026116 Bacteria 4032
108 Ga0207683_10000032 3300026121 Bacteria 105638
109 Ga0209967_1000582 3300027364 Bacteria 4777
110 Ga0209981_1000556 3300027378 Bacteria 4763
111 Ga0209996_1000228 3300027395 Bacteria 7215
112 Ga0209984_1000263 3300027424 Bacteria 5990
113 Ga0210000_1000229 3300027462 Bacteria 8033
114 Ga0209995_1000547 3300027471 Bacteria 5716
115 Ga0209968_1000110 3300027526 Bacteria 14955
116 Ga0209982_1000805 3300027552 Bacteria 4073
117 Ga0209970_1000185 3300027614 Bacteria 9917
118 Ga0210002_1000213 3300027617 Bacteria 8166
119 Ga0209983_1000856 3300027665 Bacteria 6699
120 Ga0209971_1002339 3300027682 Bacteria 4582
121 Ga0209966_1000324 3300027695 Bacteria 15500
122 Ga0209998_10000229 3300027717 Bacteria 18975
123 Ga0209974_10000314 3300027876 Bacteria 15777
124 Ga0209974_10003808 3300027876 Bacteria 5407
125 Ga0268266_10012621 3300028379 Bacteria 7299
126 Ga0265319_1000001 3300028563 Bacteria 549513
127 Ga0265338_10001703 3300028800 Bacteria 34925
128 Ga0265338_10001988 3300028800 Bacteria 31801
129 Ga0265338_10003663 3300028800 Bacteria 21403
130 Ga0265338_10015592 3300028800 Bacteria 8329
131 Ga0265324_10013217 3300029957 Bacteria 3086
132 Ga0265330_10001576 3300031235 Bacteria 13082
133 Ga0265330_10006574 3300031235 Bacteria 5741
134 Ga0265329_10000002 3300031242 Bacteria 121896
135 Ga0265329_10001442 3300031242 Bacteria 11458
136 Ga0265340_10003129 3300031247 Bacteria 9383
137 Ga0265339_10028856 3300031249 Bacteria 3152
138 Ga0265327_10001054 3300031251 Bacteria 38537
139 Ga0265316_10000017 3300031344 Bacteria 198446
140 Ga0265316_10050476 3300031344 Bacteria 3271
141 Ga0265313_10020142 3300031595 Bacteria 3687
142 Ga0265314_10000804 3300031711 Bacteria 37298
143 Ga0265314_10001708 3300031711 Bacteria 23846
144 Ga0265314_10016584 3300031711 Bacteria 5811
145 Ga0265342_10000125 3300031712 Bacteria 85179
146 Ga0373927_0003832 3300035695 Bacteria 10680
147 Ga0439432_003231 3300042006 Bacteria 6065
148 Ga0451577_0002789 3300042876 Bacteria 20165
149 Ga0453683_0000259 3300044673 Bacteria 69491
150 Ga0453684_0000004 3300044712 Bacteria 1469893
151 Ga0453684_0006675 3300044712 Bacteria 21779
152 Ga0451576_0000001 3300045051 Bacteria 1802108
153 Ga0451576_0001333 3300045051 Bacteria 42656
154 Ga0451576_0009502 3300045051 Bacteria 11269
155 Ga0451576_0010740 3300045051 Bacteria 10482
156 Ga0451576_0041574 3300045051 Bacteria 4859
157 Ga0495592_0000479 3300046454 Bacteria 29294
158 Ga0495592_0003725 3300046454 Bacteria 10986
159 Ga0495662_0017583 3300046476 Bacteria 3460
160 Ga0495628_0000246 3300046516 Bacteria 47770
161 Ga0495630_0004125 3300046517 Bacteria 10178
162 Ga0495643_0000635 3300046522 Bacteria 41615
163 Ga0495645_0004254 3300046543 Bacteria 9776
164 Ga0495657_0006863 3300046675 Bacteria 8850
165 Ga0495599_0026905 3300046678 Bacteria 3605
166 Ga0495684_0018751 3300047471 Bacteria 5330
167 Ga0496112_0016662 3300048915 Bacteria 6891
168 Ga0496114_0010811 3300048917 Bacteria 7265
169 Ga0496114_0021025 3300048917 Bacteria 5303
170 Ga0496115_0001208 3300048918 Bacteria 18530
171 Ga0496115_0035544 3300048918 Bacteria 3942
172 Ga0496125_0000110 3300048928 Bacteria 192693
173 Ga0501291_000207 3300049514 Bacteria 7481
174 Ga0501297_000057 3300049520 Bacteria 11323
175 Ga0501031_0000302 3300049568 Bacteria 28161
176 Ga0501031_0002023 3300049568 Bacteria 12755
177 Ga0501036_0021572 3300049572 Bacteria 5415
178 Ga0501039_0006505 3300049575 Bacteria 8886
179 Ga0501043_0096233 3300049579 Bacteria 2327
180 Ga0501046_0007607 3300049580 Bacteria 9506
181 Ga0501046_0042223 3300049580 Bacteria 3636
182 Ga0501068_0043767 3300049584 Bacteria 2694
183 Ga0501071_0028760 3300049587 Bacteria 3918
184 Ga0501075_0059223 3300049591 Bacteria 2884
185 Ga0501076_0020684 3300049592 Bacteria 5039
186 Ga0501076_0023936 3300049592 Bacteria 4712
187 Ga0501201_000473 3300049651 Bacteria 3709
188 Ga0501202_000291 3300049652 Bacteria 6872
189 Ga0501206_000055 3300049653 Bacteria 10610
190 Ga0501235_000119 3300049669 Bacteria 12969
191 Ga0501239_000359 3300049672 Bacteria 3398
192 Ga0501261_000504 3300049690 Bacteria 5000
193 Ga0501225_0000194 3300049705 Bacteria 18979
194 Ga0501234_000104 3300049707 Bacteria 10763
195 Ga0501081_0038208 3300049743 Bacteria 3278
196 Ga0501083_0000501 3300049744 Bacteria 25060
197 Ga0501083_0013961 3300049744 Bacteria 5613
198 Ga0501270_000133 3300049767 Bacteria 5837
199 Ga0501272_000112 3300049769 Bacteria 6356
200 Ga0501279_000366 3300049775 Bacteria 6031
201 Ga0501282_000914 3300049778 Bacteria 3343
202 Ga0501283_000211 3300049779 Bacteria 7710
203 Ga0501045_0010836 3300049824 Bacteria 6391
204 Ga0501226_000409 3300049853 Bacteria 6140
205 nmdc:mga03683_298_c1 3300050489 Bacteria 14687
206 nmdc:mga0k408_2179_c1 3300050493 Bacteria 10511
207 nmdc:mga0k408_369_c1 3300050493 Bacteria 24668
208 nmdc:mga05p37_40620_c1 3300050507 Bacteria 5713
209 nmdc:mga05p37_8732_c1 3300050507 Bacteria 11967
210 nmdc:mga0a205_39553_c1 3300050515 Bacteria 4539
211 Ga0500555_000377 3300053103 Bacteria 18802
212 Ga0500556_0000539 3300053104 Bacteria 25733
213 Ga0500658_0003127 3300053134 Bacteria 6325
214 2718716410 2718217752 Bacteria 915884
215 2787506010 2786546548 Bacteria 4745694
216 2788434908 2786546940 Bacteria 6396474
217 Ga0265336_10006429
218 JGI25405J52794_10000108
219 JGI25405J52794_10000193
220 Ga0065712_10069732
221 Ga0065715_10000562
222 Ga0065715_10003537
223 Ga0065715_10091353
224 Ga0065707_10011168
225 Ga0070683_100001630
226 Ga0070670_100024912
227 Ga0068869_100002977
228 Ga0070680_100001251
229 Ga0068868_100049389
230 Ga0070691_10002102
231 Ga0070661_100012150
232 Ga0070671_100069250
233 Ga0070674_100002447
234 Ga0070688_100022778
235 Ga0070659_100013532
236 Ga0070714_100040749
237 Ga0070700_100000593
238 Ga0070694_100037286
239 Ga0070662_100019361
240 Ga0070662_100062401
241 Ga0070681_10018996
242 Ga0068867_100001525
243 Ga0070706_100000561
244 Ga0070707_100002233
245 Ga0070707_100008093
246 Ga0070707_100064702
247 Ga0070698_100001957
248 Ga0070699_100010782
249 Ga0070679_100013738
250 Ga0070684_100019454
251 Ga0070697_100012869
252 Ga0070697_100051360
253 Ga0070686_100019256
254 Ga0070686_100030338
255 Ga0070695_100017585
256 Ga0070665_100016081
257 Ga0070664_100000099
258 Ga0068857_100042896
259 Ga0068856_100004883
260 Ga0068856_100020194
261 Ga0081455_10001181
262 Ga0081455_10001521
263 Ga0081455_10003837
264 Ga0081455_10006748
265 Ga0081455_10023893
266 Ga0081455_10029948
267 Ga0081540_1001585
268 Ga0081539_10027666
269 Ga0070717_10003704
270 Ga0070717_10005474
271 Ga0075432_10002311
272 Ga0075366_10019072
273 Ga0097621_100039516
274 Ga0068871_100012815
275 Ga0068871_100017581
276 Ga0068871_100017997
277 Ga0075430_100015413
278 Ga0075433_10031667
279 Ga0075429_100014955
280 Ga0068865_100002342
281 Ga0075436_100018460
282 Ga0111539_10034180
283 Ga0114129_10018578
284 Ga0114129_10031857
285 Ga0105243_10001503
286 Ga0105242_10001091
287 Ga0105237_10110478
288 Ga0105249_10011867
289 Ga0105239_10031180
290 Ga0157374_10034255
291 Ga0157374_10037544
292 Ga0157378_10002076
293 Ga0157378_10031041
294 Ga0157378_10036007
295 Ga0157372_10018935
296 Ga0157375_10012510
297 Ga0163163_10031464
298 Ga0157376_10016858
299 Ga0157376_10040486
300 Ga0207697_10003168
301 Ga0207697_10005922
302 Ga0207693_10014814
303 Ga0207693_10038970
304 Ga0207663_10001957
305 Ga0207657_10000780
306 Ga0207652_10033349
307 Ga0207646_10000115
308 Ga0207646_10057203
309 Ga0207664_10040893
310 Ga0207644_10063950
311 Ga0207706_10000859
312 Ga0207686_10011432
313 Ga0207665_10009877
314 Ga0207665_10031725
315 Ga0207691_10000418
316 Ga0207691_10021823
317 Ga0207661_10015464
318 Ga0207667_10052410
319 Ga0207708_10000244
320 Ga0207702_10015097
321 Ga0207702_10089943
322 Ga0207648_10001094
323 Ga0207674_10055387
324 Ga0207683_10000032
325 Ga0209967_1000582
326 Ga0209981_1000556
327 Ga0209996_1000228
328 Ga0209984_1000263
329 Ga0210000_1000229
330 Ga0209995_1000547
331 Ga0209968_1000110
332 Ga0209982_1000805
333 Ga0209970_1000185
334 Ga0210002_1000213
335 Ga0209983_1000856
336 Ga0209971_1002339
337 Ga0209966_1000324
338 Ga0209998_10000229
339 Ga0209974_10000314
340 Ga0209974_10003808
341 Ga0268266_10012621
342 Ga0265319_1000001
343 Ga0265338_10001703
344 Ga0265338_10001988
345 Ga0265338_10003663
346 Ga0265338_10015592
347 Ga0265324_10013217
348 Ga0265330_10001576
349 Ga0265330_10006574
350 Ga0265329_10000002
351 Ga0265329_10001442
352 Ga0265340_10003129
353 Ga0265339_10028856
354 Ga0265327_10001054
355 Ga0265316_10000017
356 Ga0265316_10050476
357 Ga0265313_10020142
358 Ga0265314_10000804
359 Ga0265314_10001708
360 Ga0265314_10016584
361 Ga0265342_10000125
362 Ga0373927_0003832
363 Ga0439432_003231
364 Ga0451577_0002789
365 Ga0453683_0000259
366 Ga0453684_0000004
367 Ga0453684_0006675
368 Ga0451576_0000001
369 Ga0451576_0001333
370 Ga0451576_0009502
371 Ga0451576_0010740
372 Ga0451576_0041574
373 Ga0495592_0000479
374 Ga0495592_0003725
375 Ga0495662_0017583
376 Ga0495628_0000246
377 Ga0495630_0004125
378 Ga0495643_0000635
379 Ga0495645_0004254
380 Ga0495657_0006863
381 Ga0495599_0026905
382 Ga0495684_0018751
383 Ga0496112_0016662
384 Ga0496114_0010811
385 Ga0496114_0021025
386 Ga0496115_0001208
387 Ga0496115_0035544
388 Ga0496125_0000110
389 Ga0501291_000207
390 Ga0501297_000057
391 Ga0501031_0000302
392 Ga0501031_0002023
393 Ga0501036_0021572
394 Ga0501039_0006505
395 Ga0501043_0096233
396 Ga0501046_0007607
397 Ga0501046_0042223
398 Ga0501068_0043767
399 Ga0501071_0028760
400 Ga0501075_0059223
401 Ga0501076_0020684
402 Ga0501076_0023936
403 Ga0501201_000473
404 Ga0501202_000291
405 Ga0501206_000055
406 Ga0501235_000119
407 Ga0501239_000359
408 Ga0501261_000504
409 Ga0501225_0000194
410 Ga0501234_000104
411 Ga0501081_0038208
412 Ga0501083_0000501
413 Ga0501083_0013961
414 Ga0501270_000133
415 Ga0501272_000112
416 Ga0501279_000366
417 Ga0501282_000914
418 Ga0501283_000211
419 Ga0501045_0010836
420 Ga0501226_000409
421 nmdc:mga03683_298_c1
422 nmdc:mga0k408_2179_c1
423 nmdc:mga0k408_369_c1
424 nmdc:mga05p37_40620_c1
425 nmdc:mga05p37_8732_c1
426 nmdc:mga0a205_39553_c1
427 Ga0500555_000377
428 Ga0500556_0000539
429 Ga0500658_0003127
430 2718716410
431 2787506010
432 2788434908

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13603

tRNA-synt_1_2

Leucyl-tRNA synthetase, editing domain

412

554

0.93

PF05198

IF3_N

Translation initiation factor IF-3, N-terminal domain

357

423

0.92

PF00133

tRNA-synt_1

tRNA synthetases class I (I, L, M and V)

713

788

0.86

PF13603

tRNA-synt_1_2

Leucyl-tRNA synthetase, editing domain

294

367

0.83

PF08264

Anticodon_1

Anticodon-binding domain of tRNA ligase

854

978

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
4k48-assembly1.cif.gz_A structure of the streptococcus pneumoniae leucyl-trna synthetase editing domain 0.9651 249 429
3pz5-assembly1.cif.gz_A the crystal structure of aaleurs-cp1-d20 0.9482 248 431
4k48-assembly1.cif.gz_A structure of the streptococcus pneumoniae leucyl-trna synthetase editing domain 0.9393 249 429
3pz5-assembly1.cif.gz_A the crystal structure of aaleurs-cp1-d20 0.9099 248 431
7pqk-assembly1.cif.gz_A co-crystal structure of m. tuberculosis leurs in complex with the adduct formed by prodrug cmpd1 with adenosine-monophosphate 0.9038 249 431
ID Description Score Start End Superfamily
af_Q2FXH2_244_375_3.90.740.10 Alpha Beta;Alpha-Beta Complex;Isoleucyl-tRNA Synthetase; domain 2;Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain 0.9575 266 398 3.90.740.10
af_Q2FXH2_244_375_3.90.740.10 Alpha Beta;Alpha-Beta Complex;Isoleucyl-tRNA Synthetase; domain 2;Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain 0.9505 266 398 3.90.740.10
3pz5A00 Alpha Beta;Alpha-Beta Complex;Isoleucyl-tRNA Synthetase; domain 2;Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain 0.9482 248 431 3.90.740.10
af_Q2FXR8_200_287_3.90.740.10 Alpha Beta;Alpha-Beta Complex;Isoleucyl-tRNA Synthetase; domain 2;Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain 0.917 253 373 3.90.740.10
af_Q2FXH2_584_742_1.10.730.10 Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 0.9164 607 723 1.10.730.10
ID Description Score Start End GO Terms
AF-A0A354EAM0-F1-model_v4 deleted 0.9882 226 359
AF-A0A222C6N6-F1-model_v4 leucine--tRNA ligase (EC 6.1.1.4) 0.9852 232 361 GO:0002161
GO:0004823
GO:0005524
GO:0005829
GO:0006429
AF-A0A222C6N6-F1-model_v4 leucine--tRNA ligase (EC 6.1.1.4) 0.9778 232 361 GO:0002161
GO:0004823
GO:0005524
GO:0005829
GO:0006429
AF-A0A354EAM0-F1-model_v4 deleted 0.9734 226 359
AF-A0A832V1T2-F1-model_v4 leucine--tRNA ligase (EC 6.1.1.4) 0.9656 244 378 GO:0002161
GO:0004823
GO:0005524
GO:0005829
GO:0006429

Map