F326700

General Info

Members Datasets Scaffolds Average Seq Length
215 157 430 359

Family's Representative Sequence

Representative Sequence 3300039437|Ga0436365_0297290|Ga0436365_0297290_1397_2635
Length 412
Sequence MRASRWWSAERMPSASTERASAARLGAVPAVSGEIAAPRAGSGEAGAHKPPAGVGEPLAWPKRNLFGSWWSTALTLALGYLIVRWSISFIDWALVHAVWSVPYNDRGAPVPSACQAAQVVGACWAVIADKYRFILFGRYPYDEQWRPAICIALFIALYAVSAWRRFWRKELLGIWLATLAVIGLLMWGGIPGLPYVPQDDWGGLPITLILATFGLAFAFPLAVLVALGRRAANLPAVRILCIVYVELIRGVPLVSLLFMASVMFPLFMPAGVNIDKLLRAQIAIILFAAAYLAEVVRGGLQALPKGQFEGADALGLSYWQKTRLIILPQALRVVIPPLVNTFIGFFKDTSLVLIIGIFDLLTAGKIALSDPLWASYTTEVYLVLAVIYFLFCFAMSKYSRGLEREFNRARRR

Samples

Sample ID Description Type Environment
1 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
22 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
23 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
24 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
25 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
26 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
27 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
28 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
29 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
30 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
31 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
32 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
34 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
35 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
36 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
37 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
38 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
39 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
44 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
45 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
46 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
47 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
48 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
49 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
50 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
51 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
52 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
53 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
54 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
55 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
56 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
59 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
61 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
62 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
63 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
94 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
95 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
96 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
97 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
98 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
99 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
100 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
101 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
102 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
103 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
104 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
105 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
106 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
107 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
108 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
109 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
110 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
111 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
112 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
113 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
114 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
115 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
116 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
117 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
118 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
119 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
120 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
121 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
122 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
123 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
124 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
125 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
126 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
127 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
128 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
129 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
131 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
132 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
133 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
134 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
135 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
136 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
137 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
138 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
139 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
140 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
141 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
142 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
143 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
144 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
145 2513237104 Bradyrhizobium sp. EC3.3 Isolate Nodule
146 2524023205 Bradyrhizobium sp. Cp5.3 Isolate Nodule
147 2739367655 Pusillimonas sp. YR330 Isolate Unclassified
148 2744054633 Bradyrhizobium neotropicale BR 10247 Isolate Unclassified
149 2857576091 Pigmentiphaga sp. R-72090 Isolate Unclassified
150 2883577096 Roseococcus sp. SYP-B2431 Isolate Rhizosphere
151 2894772417 Roseomonas oryzicola KCTC 22478 Isolate Rhizosphere
152 2922425934
153 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
154 8002392321 Alcaligenes faecalis Mc250 Isolate Rhizosphere
155 8048746797 Alcaligenes endophyticus DSM 100498 Isolate Unclassified
156 8054002106 Azospirillum lipoferum 59b Isolate Unclassified
157 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 94.39
Metatranscriptomes 0
Isolates 5.61

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.63
Nodule 0.93
Rhizoplane 1.4
Rhizosphere 70.7
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436365_0297290 3300039437 Bacteria 3111
2 JGI25151J46595_10000652 3300003187 Bacteria 29555
3 JGI25406J46586_10000573 3300003203 Bacteria 17369
4 Ga0055529_1001068 3300003763 Bacteria 12713
5 Ga0070676_10232896 3300005328 Bacteria 1221
6 Ga0070670_100021705 3300005331 Bacteria 5521
7 Ga0068869_100105814 3300005334 Bacteria 2134
8 Ga0070680_100043590 3300005336 Bacteria 3645
9 Ga0070668_100014752 3300005347 Bacteria 5840
10 Ga0070669_100005893 3300005353 Bacteria 8842
11 Ga0070674_100000763 3300005356 Bacteria 16535
12 Ga0070709_10123365 3300005434 Bacteria 1759
13 Ga0070709_10181743 3300005434 Bacteria 1477
14 Ga0070714_100040212 3300005435 Bacteria 3940
15 Ga0070714_100048132 3300005435 Bacteria 3625
16 Ga0070714_100190365 3300005435 Bacteria 1872
17 Ga0070714_100267074 3300005435 Bacteria 1586
18 Ga0070713_100079539 3300005436 Bacteria 2793
19 Ga0070700_100051546 3300005441 Bacteria 2562
20 Ga0070708_100304769 3300005445 Bacteria 1500
21 Ga0070662_100006187 3300005457 Bacteria 7705
22 Ga0070662_100029417 3300005457 Bacteria 3834
23 Ga0070679_100028142 3300005530 Bacteria 5538
24 Ga0068853_100046066 3300005539 Bacteria 3738
25 Ga0070672_100012617 3300005543 Bacteria 5942
26 Ga0070672_100242468 3300005543 Bacteria 1516
27 Ga0070704_100064639 3300005549 Bacteria 2631
28 Ga0068864_100032653 3300005618 Bacteria 4423
29 Ga0068864_100078299 3300005618 Bacteria 2893
30 Ga0068864_100156799 3300005618 Bacteria 2067
31 Ga0068861_100028953 3300005719 Bacteria 4045
32 Ga0068870_10000811 3300005840 Bacteria 12142
33 Ga0068863_100007714 3300005841 Bacteria 10521
34 Ga0068863_100026756 3300005841 Bacteria 5500
35 Ga0068863_100282203 3300005841 Bacteria 1609
36 Ga0068858_100049629 3300005842 Bacteria 3886
37 Ga0068862_100016855 3300005844 Bacteria 6081
38 Ga0081539_10000054 3300005985 Bacteria 259053
39 Ga0070717_10016289 3300006028 Bacteria 5762
40 Ga0075365_10008307 3300006038 Bacteria 5884
41 Ga0075366_10049958 3300006195 Bacteria 2483
42 Ga0075366_10075061 3300006195 Bacteria 2017
43 Ga0097621_100060929 3300006237 Bacteria 3094
44 Ga0075370_10049321 3300006353 Bacteria 2386
45 Ga0075428_100000671 3300006844 Bacteria 35135
46 Ga0075428_100000912 3300006844 Bacteria 31225
47 Ga0075430_100000702 3300006846 Bacteria 25555
48 Ga0075430_100011907 3300006846 Bacteria 7404
49 Ga0075431_100000502 3300006847 Bacteria 32691
50 Ga0075431_100114630 3300006847 Bacteria 2782
51 Ga0075433_10035014 3300006852 Bacteria 4315
52 Ga0075434_100068131 3300006871 Bacteria 3545
53 Ga0075434_100204633 3300006871 Bacteria 1994
54 Ga0075434_100223926 3300006871 Bacteria 1901
55 Ga0075429_100006290 3300006880 Bacteria 10279
56 Ga0075429_100016473 3300006880 Bacteria 6405
57 Ga0105240_10199171 3300009093 Bacteria 2348
58 Ga0111539_10027069 3300009094 Bacteria 7003
59 Ga0114129_10080423 3300009147 Bacteria 4529
60 Ga0105248_10001199 3300009177 Bacteria 28958
61 Ga0105248_10074738 3300009177 Bacteria 3809
62 Ga0105248_10201612 3300009177 Bacteria 2242
63 Ga0105248_10229630 3300009177 Bacteria 2089
64 Ga0157378_10319300 3300013297 Bacteria 1508
65 Ga0163162_10066057 3300013306 Bacteria 3666
66 Ga0163162_10349405 3300013306 Bacteria 1611
67 Ga0157375_10016106 3300013308 Bacteria 6706
68 Ga0163163_10141391 3300014325 Bacteria 2449
69 Ga0157380_10013159 3300014326 Bacteria 6025
70 Ga0157380_10014427 3300014326 Bacteria 5779
71 Ga0157380_10015134 3300014326 Bacteria 5662
72 Ga0157377_10003165 3300014745 Bacteria 7421
73 Ga0157379_10153449 3300014968 Bacteria 2077
74 Ga0157376_10008034 3300014969 Bacteria 7578
75 Ga0213872_10000043 3300021361 Bacteria 117678
76 Ga0213872_10000358 3300021361 Bacteria 38353
77 Ga0213876_10113936 3300021384 Bacteria 1435
78 Ga0213875_10002284 3300021388 Bacteria 11616
79 Ga0213875_10004616 3300021388 Bacteria 7515
80 Ga0213871_10005346 3300021441 Bacteria 2640
81 Ga0209672_106628 3300025228 Bacteria 1864
82 Ga0209148_1000699 3300025254 Bacteria 27192
83 Ga0209233_1013118 3300025261 Bacteria 2375
84 Ga0209455_1000227 3300025272 Bacteria 75434
85 Ga0209675_1004883 3300025291 Bacteria 5798
86 Ga0209025_1000055 3300025294 Bacteria 316748
87 Ga0209025_1000071 3300025294 Bacteria 287297
88 Ga0209758_1006297 3300025297 Bacteria 8619
89 Ga0209050_1016676 3300025298 Bacteria 2987
90 Ga0209051_1004951 3300025303 Bacteria 7962
91 Ga0207655_1064390 3300025728 Bacteria 1398
92 Ga0207692_10063548 3300025898 Bacteria 1919
93 Ga0207680_10172939 3300025903 Bacteria 1456
94 Ga0207645_10114434 3300025907 Bacteria 1748
95 Ga0207643_10039202 3300025908 Bacteria 2665
96 Ga0207643_10045012 3300025908 Bacteria 2492
97 Ga0207707_10087034 3300025912 Bacteria 2730
98 Ga0207652_10018655 3300025921 Bacteria 5692
99 Ga0207650_10055086 3300025925 Bacteria 2951
100 Ga0207659_10183702 3300025926 Bacteria 1659
101 Ga0207687_10241631 3300025927 Bacteria 1431
102 Ga0207700_10141265 3300025928 Bacteria 1979
103 Ga0207664_10031256 3300025929 Bacteria 4072
104 Ga0207664_10034500 3300025929 Bacteria 3897
105 Ga0207644_10050215 3300025931 Bacteria 2989
106 Ga0207644_10060176 3300025931 Bacteria 2748
107 Ga0207706_10033893 3300025933 Bacteria 4545
108 Ga0207706_10050832 3300025933 Bacteria 3662
109 Ga0207706_10121596 3300025933 Bacteria 2296
110 Ga0207670_10080651 3300025936 Bacteria 2275
111 Ga0207665_10035145 3300025939 Bacteria 3325
112 Ga0207691_10001473 3300025940 Bacteria 23484
113 Ga0207691_10188989 3300025940 Bacteria 1797
114 Ga0207691_10242424 3300025940 Bacteria 1558
115 Ga0207711_10150536 3300025941 Bacteria 2099
116 Ga0207679_10091879 3300025945 Bacteria 2350
117 Ga0207651_10080566 3300025960 Bacteria 2344
118 Ga0207658_10027784 3300025986 Bacteria 3979
119 Ga0207708_10075249 3300026075 Bacteria 2589
120 Ga0207641_10153892 3300026088 Bacteria 2085
121 Ga0207641_10161029 3300026088 Bacteria 2040
122 Ga0207648_10015871 3300026089 Bacteria 6905
123 Ga0207648_10116168 3300026089 Bacteria 2352
124 Ga0207676_10017901 3300026095 Bacteria 5141
125 Ga0207676_10057362 3300026095 Bacteria 3066
126 Ga0207676_10131013 3300026095 Bacteria 2132
127 Ga0209966_1003720 3300027695 Bacteria 2576
128 Ga0268266_10439181 3300028379 Bacteria 1239
129 Ga0268265_10194811 3300028380 Bacteria 1753
130 Ga0265327_10065478 3300031251 Bacteria 1837
131 Ga0307513_10110434 3300031456 Bacteria 2745
132 Ga0307408_100162749 3300031548 Bacteria 1774
133 Ga0316578_10130300 3300031728 Bacteria 1513
134 Ga0307412_10007247 3300031911 Bacteria 6287
135 Ga0373937_0201949 3300036401 Bacteria 1869
136 Ga0395900_0003258 3300037418 Bacteria 17580
137 Ga0395898_0158614 3300037466 Bacteria 2164
138 Ga0436364_0345692 3300037853 Bacteria 15689
139 Ga0436364_0403885 3300037853 Bacteria 5506
140 Ga0436364_1150030 3300037853 Bacteria 2816
141 Ga0436364_1437492 3300037853 Bacteria 11636
142 Ga0436365_0233045 3300039437 Bacteria 6984
143 Ga0436360_0352512 3300039438 Bacteria 3393
144 Ga0436360_0548410 3300039438 Bacteria 4038
145 Ga0436360_0759370 3300039438 Bacteria 1863
146 Ga0436360_1204791 3300039438 Bacteria 5940
147 Ga0436361_0530495 3300039447 Bacteria 101563
148 Ga0436361_1133215 3300039447 Bacteria 77136
149 Ga0436362_0139828 3300039453 Bacteria 1484
150 Ga0436362_0785009 3300039453 Bacteria 1423
151 Ga0439455_0022002 3300042012 Bacteria 1525
152 Ga0451577_0046706 3300042876 Bacteria 3873
153 Ga0453684_0285050 3300044712 Bacteria 1882
154 Ga0451576_0000858 3300045051 Bacteria 58813
155 Ga0451576_0598931 3300045051 Bacteria 1158
156 Ga0466967_0109336 3300045976 Bacteria 2538
157 Ga0495650_0011333 3300046471 Bacteria 4895
158 Ga0495607_0000766 3300046501 Bacteria 30801
159 Ga0495621_0001015 3300046539 Bacteria 7182
160 Ga0495676_0146927 3300047321 Bacteria 1683
161 Ga0495626_0045752 3300048091 Bacteria 2042
162 Ga0496108_0151067 3300048911 Bacteria 2004
163 Ga0496112_0169282 3300048915 Bacteria 2150
164 Ga0496113_0054574 3300048916 Bacteria 2991
165 Ga0496116_0020483 3300048919 Bacteria 5021
166 Ga0496117_0008654 3300048920 Bacteria 9627
167 Ga0496118_0026931 3300048921 Bacteria 4881
168 Ga0496120_0026406 3300048923 Bacteria 3586
169 Ga0496120_0069064 3300048923 Bacteria 1947
170 Ga0496121_0000153 3300048924 Bacteria 150635
171 Ga0496121_0098254 3300048924 Bacteria 2266
172 Ga0496122_0004972 3300048925 Bacteria 16086
173 Ga0496123_0003372 3300048926 Bacteria 18061
174 Ga0496123_0038167 3300048926 Bacteria 3380
175 Ga0496124_0084534 3300048927 Bacteria 2601
176 Ga0496125_0002020 3300048928 Bacteria 27488
177 Ga0496125_0005929 3300048928 Bacteria 13386
178 Ga0496125_0125962 3300048928 Bacteria 1815
179 Ga0496126_0033069 3300048929 Bacteria 4867
180 Ga0501083_0004289 3300049744 Bacteria 10041
181 Ga0501035_0085381 3300049822 Bacteria 2783
182 Ga0501035_0091247 3300049822 Bacteria 2681
183 Ga0501044_0000617 3300049823 Bacteria 42992
184 nmdc:mga03n38_111009_c1 3300050490 Bacteria 1335
185 nmdc:mga0yw44_18706_c1 3300050492 Bacteria 3802
186 nmdc:mga0k408_87936_c1 3300050493 Bacteria 1825
187 nmdc:mga06z11_142549_c1 3300050494 Bacteria 1356
188 nmdc:mga07m45_60122_c1 3300050496 Bacteria 2150
189 nmdc:mga09592_580_c1 3300050508 Bacteria 27661
190 nmdc:mga09592_6946_c1 3300050508 Bacteria 9204
191 nmdc:mga0qj67_147300_c1 3300050509 Bacteria 1909
192 nmdc:mga0qj67_16229_c1 3300050509 Bacteria 5645
193 nmdc:mga0qj67_1941_c1 3300050509 Bacteria 14709
194 nmdc:mga06r32_4345_c1 3300050510 Bacteria 12684
195 nmdc:mga06r32_6992_c1 3300050510 Bacteria 10157
196 nmdc:mga0rr50_6708_c1 3300050513 Bacteria 7042
197 nmdc:mga08x19_78839_c1 3300050514 Bacteria 2159
198 Ga0500651_0006783 3300053093 Bacteria 6631
199 Ga0500641_0015349 3300053096 Bacteria 2841
200 Ga0500642_0000051 3300053130 Bacteria 77123
201 Ga0500642_0000247 3300053130 Bacteria 20388
202 Ga0501082_0034598 3300060353 Bacteria 4354
203 2513721368 2513237104 Bacteria 10034502
204 2524438849 2524023205 Bacteria 8918781
205 2739612781 2739367655 Bacteria 4051151
206 2745074668 2744054633 Bacteria 8678936
207 2857580964 2857576091 Bacteria 5465855
208 2883579315 2883577096 Bacteria 4709178
209 2894777368 2894772417 Bacteria 5305674
210 2922431893
211 2929200182 2929199973 Bacteria 7260745
212 8002395603 8002392321 Bacteria 4159911
213 8048748706 8048746797 Bacteria 3557226
214 8054002497 8054002106 Bacteria 7987183
215 8055912182 8055909800 Bacteria 7278581
216 Ga0436365_0297290
217 JGI25151J46595_10000652
218 JGI25406J46586_10000573
219 Ga0055529_1001068
220 Ga0070676_10232896
221 Ga0070670_100021705
222 Ga0068869_100105814
223 Ga0070680_100043590
224 Ga0070668_100014752
225 Ga0070669_100005893
226 Ga0070674_100000763
227 Ga0070709_10123365
228 Ga0070709_10181743
229 Ga0070714_100040212
230 Ga0070714_100048132
231 Ga0070714_100190365
232 Ga0070714_100267074
233 Ga0070713_100079539
234 Ga0070700_100051546
235 Ga0070708_100304769
236 Ga0070662_100006187
237 Ga0070662_100029417
238 Ga0070679_100028142
239 Ga0068853_100046066
240 Ga0070672_100012617
241 Ga0070672_100242468
242 Ga0070704_100064639
243 Ga0068864_100032653
244 Ga0068864_100078299
245 Ga0068864_100156799
246 Ga0068861_100028953
247 Ga0068870_10000811
248 Ga0068863_100007714
249 Ga0068863_100026756
250 Ga0068863_100282203
251 Ga0068858_100049629
252 Ga0068862_100016855
253 Ga0081539_10000054
254 Ga0070717_10016289
255 Ga0075365_10008307
256 Ga0075366_10049958
257 Ga0075366_10075061
258 Ga0097621_100060929
259 Ga0075370_10049321
260 Ga0075428_100000671
261 Ga0075428_100000912
262 Ga0075430_100000702
263 Ga0075430_100011907
264 Ga0075431_100000502
265 Ga0075431_100114630
266 Ga0075433_10035014
267 Ga0075434_100068131
268 Ga0075434_100204633
269 Ga0075434_100223926
270 Ga0075429_100006290
271 Ga0075429_100016473
272 Ga0105240_10199171
273 Ga0111539_10027069
274 Ga0114129_10080423
275 Ga0105248_10001199
276 Ga0105248_10074738
277 Ga0105248_10201612
278 Ga0105248_10229630
279 Ga0157378_10319300
280 Ga0163162_10066057
281 Ga0163162_10349405
282 Ga0157375_10016106
283 Ga0163163_10141391
284 Ga0157380_10013159
285 Ga0157380_10014427
286 Ga0157380_10015134
287 Ga0157377_10003165
288 Ga0157379_10153449
289 Ga0157376_10008034
290 Ga0213872_10000043
291 Ga0213872_10000358
292 Ga0213876_10113936
293 Ga0213875_10002284
294 Ga0213875_10004616
295 Ga0213871_10005346
296 Ga0209672_106628
297 Ga0209148_1000699
298 Ga0209233_1013118
299 Ga0209455_1000227
300 Ga0209675_1004883
301 Ga0209025_1000055
302 Ga0209025_1000071
303 Ga0209758_1006297
304 Ga0209050_1016676
305 Ga0209051_1004951
306 Ga0207655_1064390
307 Ga0207692_10063548
308 Ga0207680_10172939
309 Ga0207645_10114434
310 Ga0207643_10039202
311 Ga0207643_10045012
312 Ga0207707_10087034
313 Ga0207652_10018655
314 Ga0207650_10055086
315 Ga0207659_10183702
316 Ga0207687_10241631
317 Ga0207700_10141265
318 Ga0207664_10031256
319 Ga0207664_10034500
320 Ga0207644_10050215
321 Ga0207644_10060176
322 Ga0207706_10033893
323 Ga0207706_10050832
324 Ga0207706_10121596
325 Ga0207670_10080651
326 Ga0207665_10035145
327 Ga0207691_10001473
328 Ga0207691_10188989
329 Ga0207691_10242424
330 Ga0207711_10150536
331 Ga0207679_10091879
332 Ga0207651_10080566
333 Ga0207658_10027784
334 Ga0207708_10075249
335 Ga0207641_10153892
336 Ga0207641_10161029
337 Ga0207648_10015871
338 Ga0207648_10116168
339 Ga0207676_10017901
340 Ga0207676_10057362
341 Ga0207676_10131013
342 Ga0209966_1003720
343 Ga0268266_10439181
344 Ga0268265_10194811
345 Ga0265327_10065478
346 Ga0307513_10110434
347 Ga0307408_100162749
348 Ga0316578_10130300
349 Ga0307412_10007247
350 Ga0373937_0201949
351 Ga0395900_0003258
352 Ga0395898_0158614
353 Ga0436364_0345692
354 Ga0436364_0403885
355 Ga0436364_1150030
356 Ga0436364_1437492
357 Ga0436365_0233045
358 Ga0436360_0352512
359 Ga0436360_0548410
360 Ga0436360_0759370
361 Ga0436360_1204791
362 Ga0436361_0530495
363 Ga0436361_1133215
364 Ga0436362_0139828
365 Ga0436362_0785009
366 Ga0439455_0022002
367 Ga0451577_0046706
368 Ga0453684_0285050
369 Ga0451576_0000858
370 Ga0451576_0598931
371 Ga0466967_0109336
372 Ga0495650_0011333
373 Ga0495607_0000766
374 Ga0495621_0001015
375 Ga0495676_0146927
376 Ga0495626_0045752
377 Ga0496108_0151067
378 Ga0496112_0169282
379 Ga0496113_0054574
380 Ga0496116_0020483
381 Ga0496117_0008654
382 Ga0496118_0026931
383 Ga0496120_0026406
384 Ga0496120_0069064
385 Ga0496121_0000153
386 Ga0496121_0098254
387 Ga0496122_0004972
388 Ga0496123_0003372
389 Ga0496123_0038167
390 Ga0496124_0084534
391 Ga0496125_0002020
392 Ga0496125_0005929
393 Ga0496125_0125962
394 Ga0496126_0033069
395 Ga0501083_0004289
396 Ga0501035_0085381
397 Ga0501035_0091247
398 Ga0501044_0000617
399 nmdc:mga03n38_111009_c1
400 nmdc:mga0yw44_18706_c1
401 nmdc:mga0k408_87936_c1
402 nmdc:mga06z11_142549_c1
403 nmdc:mga07m45_60122_c1
404 nmdc:mga09592_580_c1
405 nmdc:mga09592_6946_c1
406 nmdc:mga0qj67_147300_c1
407 nmdc:mga0qj67_16229_c1
408 nmdc:mga0qj67_1941_c1
409 nmdc:mga06r32_4345_c1
410 nmdc:mga06r32_6992_c1
411 nmdc:mga0rr50_6708_c1
412 nmdc:mga08x19_78839_c1
413 Ga0500651_0006783
414 Ga0500641_0015349
415 Ga0500642_0000051
416 Ga0500642_0000247
417 Ga0501082_0034598
418 2513721368
419 2524438849
420 2739612781
421 2745074668
422 2857580964
423 2883579315
424 2894777368
425 2922431893
426 2929200182
427 8002395603
428 8048748706
429 8054002497
430 8055912182

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

218

408

0.85

Map