F326590

General Info

Members Datasets Scaffolds Average Seq Length
215 99 430 255

Family's Representative Sequence

Representative Sequence 3300031691|Ga0316579_10029653|Ga0316579_100296532
Length 274
Sequence MFSSETVFQRQRSIRIQGVVLRHRDWGEADRLLWLFTLELGKIRAIAKGVRKPRSRKAGHLEPFARVNLLLARGREIPIVTQAEAVDPFLALRDDILRGTYASYVVELLDRFTYEEGENRALYHLLVDTLERLVQLDDLDLTLHYYEIRLLDLMGFRPQLFECANCGKEILPQDQYFSALQGGALCPQCGLRLDGSRPISMNALKYLRHFQRSSFSEARRARLTPELNREIEILMQHYLTYLLERSLNTPVFLRRVRKSAVSGESFSDLGDEDN

Samples

Sample ID Description Type Environment
1 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
9 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
15 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
18 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
19 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
20 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
21 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
22 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
23 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
24 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
25 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
26 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
27 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
31 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
32 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
38 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
39 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
40 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
41 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
42 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
43 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
44 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
45 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
46 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
47 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
48 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
49 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
50 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
51 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
52 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
53 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
54 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
55 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
56 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
57 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
58 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
59 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
60 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
61 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
62 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
63 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
64 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
65 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
66 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
67 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
68 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
69 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
70 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
71 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
72 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
73 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
74 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
75 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
77 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
78 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
79 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
80 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
81 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
82 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
83 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
84 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
85 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
86 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
87 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
88 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
89 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
90 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
91 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
92 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
93 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
94 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
95 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
96 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
97 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
98 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
99 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.47
Nodule 0
Rhizoplane 0.47
Rhizosphere 99.07
Stem 0
Stem Tuber 0
Unclassified 18.6

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316579_10029653 3300031691 Bacteria 2497
2 JGI25406J46586_10013881 3300003203 Unclassified 3441
3 Ga0065704_10078463 3300005289 Bacteria 4405
4 Ga0065704_10230441 3300005289 Bacteria 1045
5 Ga0065715_10325602 3300005293 Bacteria 994
6 Ga0065707_10081809 3300005295 Bacteria 37808
7 Ga0065707_10083479 3300005295 Bacteria 9015
8 Ga0065707_10089479 3300005295 Bacteria 4357
9 Ga0065707_10220254 3300005295 Unclassified 1228
10 Ga0070689_100155272 3300005340 Bacteria 1847
11 Ga0070669_100277846 3300005353 Bacteria 1341
12 Ga0070705_100067267 3300005440 Unclassified 2152
13 Ga0070705_100397861 3300005440 Bacteria 1019
14 Ga0070694_100093024 3300005444 Unclassified 2119
15 Ga0070694_100182209 3300005444 Bacteria 1554
16 Ga0070694_100317126 3300005444 Bacteria 1199
17 Ga0070706_100141981 3300005467 Bacteria 2241
18 Ga0070707_100152428 3300005468 Unclassified 2251
19 Ga0070698_100010333 3300005471 Bacteria 9965
20 Ga0070698_100019427 3300005471 Bacteria 7133
21 Ga0070698_100044938 3300005471 Unclassified 4521
22 Ga0070698_100184605 3300005471 Bacteria 2024
23 Ga0070699_100000855 3300005518 Bacteria 28296
24 Ga0070699_100053785 3300005518 Unclassified 3484
25 Ga0070699_100057957 3300005518 Bacteria 3354
26 Ga0070697_100170878 3300005536 Bacteria 1840
27 Ga0070704_100039365 3300005549 Unclassified 3245
28 Ga0068857_100164712 3300005577 Bacteria 2013
29 Ga0068859_100008852 3300005617 Bacteria 10163
30 Ga0068858_100219780 3300005842 Bacteria 1799
31 Ga0068862_100020446 3300005844 Bacteria 5531
32 Ga0081539_10001287 3300005985 Bacteria 44102
33 Ga0075427_10002310 3300006194 Bacteria 2544
34 Ga0075428_100067458 3300006844 Bacteria 3916
35 Ga0075428_100105538 3300006844 Bacteria 3072
36 Ga0075430_100169207 3300006846 Bacteria 1818
37 Ga0075431_100347320 3300006847 Bacteria 1492
38 Ga0075431_100684830 3300006847 Bacteria 1004
39 Ga0075433_10052162 3300006852 Bacteria 3563
40 Ga0075433_10145586 3300006852 Bacteria 2106
41 Ga0075433_10245813 3300006852 Unclassified 1588
42 Ga0075433_10282362 3300006852 Bacteria 1471
43 Ga0075429_100013988 3300006880 Bacteria 6955
44 Ga0075429_100025875 3300006880 Bacteria 5094
45 Ga0075429_100058465 3300006880 Bacteria 3357
46 Ga0075429_100178208 3300006880 Bacteria 1862
47 Ga0075429_100190026 3300006880 Bacteria 1799
48 Ga0097620_100008852 3300006931 Bacteria 10163
49 Ga0111539_10258781 3300009094 Bacteria 2026
50 Ga0114129_10001261 3300009147 Bacteria 33789
51 Ga0114129_10008182 3300009147 Bacteria 14903
52 Ga0114129_10036573 3300009147 Bacteria 6932
53 Ga0114129_10054961 3300009147 Bacteria 5581
54 Ga0114129_10137376 3300009147 Bacteria 3353
55 Ga0114129_10416194 3300009147 Bacteria 1769
56 Ga0114129_10442917 3300009147 Bacteria 1705
57 Ga0114129_10477026 3300009147 Bacteria 1633
58 Ga0114129_10715128 3300009147 Unclassified 1286
59 Ga0114129_11110470 3300009147 Bacteria 989
60 Ga0105243_10262805 3300009148 Bacteria 1546
61 Ga0105246_10042235 3300011119 Bacteria 3087
62 Ga0207646_10088281 3300025922 Unclassified 2774
63 Ga0207708_10021726 3300026075 Bacteria 4841
64 Ga0207674_10149504 3300026116 Unclassified 2293
65 Ga0207675_100257131 3300026118 Bacteria 1692
66 Ga0268265_10024957 3300028380 Bacteria 4237
67 Ga0268265_10182831 3300028380 Unclassified 1803
68 Ga0268265_10260985 3300028380 Bacteria 1540
69 Ga0265326_10013003 3300028558 Bacteria 2439
70 Ga0265334_10056255 3300028573 Bacteria 1494
71 Ga0265336_10060841 3300028666 Bacteria 1133
72 Ga0265338_10285451 3300028800 Bacteria 1204
73 Ga0265324_10044521 3300029957 Bacteria 1530
74 Ga0265332_10127338 3300031238 Bacteria 1069
75 Ga0265320_10006959 3300031240 Bacteria 7055
76 Ga0265325_10017093 3300031241 Bacteria 4038
77 Ga0265329_10006433 3300031242 Bacteria 4659
78 Ga0265339_10069934 3300031249 Bacteria 1873
79 Ga0265339_10094045 3300031249 Bacteria 1567
80 Ga0265331_10003040 3300031250 Bacteria 11009
81 Ga0265331_10109689 3300031250 Bacteria 1266
82 Ga0265316_10026790 3300031344 Bacteria 4788
83 Ga0265316_10045471 3300031344 Bacteria 3484
84 Ga0265316_10191274 3300031344 Bacteria 1520
85 Ga0265313_10078157 3300031595 Bacteria 1509
86 Ga0316575_10052980 3300031665 Unclassified 1616
87 Ga0316579_10001529 3300031691 Bacteria 8426
88 Ga0316579_10062576 3300031691 Bacteria 1752
89 Ga0265314_10107994 3300031711 Bacteria 1774
90 Ga0265342_10092688 3300031712 Bacteria 1730
91 Ga0316576_10084369 3300031727 Bacteria 2361
92 Ga0316576_10171346 3300031727 Bacteria 1638
93 Ga0316578_10162729 3300031728 Unclassified 1345
94 Ga0316578_10341658 3300031728 Bacteria 892
95 Ga0316577_10003694 3300031733 Bacteria 7787
96 Ga0316577_10037745 3300031733 Unclassified 2700
97 Ga0316577_10293370 3300031733 Bacteria 921
98 Ga0307413_10448539 3300031824 Bacteria 1023
99 Ga0307409_100146214 3300031995 Bacteria 2045
100 Ga0307416_100169638 3300032002 Bacteria 2029
101 Ga0307415_100433471 3300032126 Unclassified 1131
102 Ga0316585_10038169 3300032137 Bacteria 1526
103 Ga0316580_10111837 3300032139 Unclassified 836
104 Ga0316574_0000534 3300035398 Bacteria 15634
105 Ga0316574_0036785 3300035398 Unclassified 2998
106 Ga0316574_0083455 3300035398 Bacteria 2031
107 Ga0373937_0490808 3300036401 Bacteria 1167
108 Ga0316582_0015747 3300036647 Bacteria 4334
109 Ga0316582_0026312 3300036647 Bacteria 3501
110 Ga0316582_0106102 3300036647 Bacteria 1865
111 Ga0316582_0164461 3300036647 Bacteria 1504
112 Ga0316584_0017526 3300036712 Bacteria 5152
113 Ga0316584_0035001 3300036712 Bacteria 3725
114 Ga0316584_0134136 3300036712 Bacteria 1849
115 Ga0316584_0182373 3300036712 Bacteria 1554
116 Ga0316584_0391642 3300036712 Unclassified 991
117 Ga0316581_0011129 3300037588 Bacteria 2509
118 Ga0316581_0092725 3300037588 Bacteria 930
119 Ga0451577_0005140 3300042876 Bacteria 13464
120 Ga0451577_0008275 3300042876 Bacteria 10128
121 Ga0451577_0029462 3300042876 Bacteria 4962
122 Ga0451577_0059233 3300042876 Unclassified 3415
123 Ga0451577_0132192 3300042876 Bacteria 2239
124 Ga0451577_0185587 3300042876 Bacteria 1875
125 Ga0451577_0191646 3300042876 Bacteria 1844
126 Ga0451577_0311588 3300042876 Unclassified 1427
127 Ga0451577_0399585 3300042876 Bacteria 1247
128 Ga0451577_0407815 3300042876 Bacteria 1234
129 Ga0453683_0000682 3300044673 Bacteria 35947
130 Ga0453683_0002565 3300044673 Bacteria 14005
131 Ga0453683_0016129 3300044673 Bacteria 4827
132 Ga0453683_0129140 3300044673 Bacteria 1592
133 Ga0453684_0000012 3300044712 Bacteria 1062512
134 Ga0453684_0000053 3300044712 Bacteria 545350
135 Ga0453684_0000164 3300044712 Bacteria 296093
136 Ga0453684_0000685 3300044712 Bacteria 120661
137 Ga0453684_0000962 3300044712 Bacteria 94884
138 Ga0453684_0001379 3300044712 Bacteria 70338
139 Ga0453684_0001447 3300044712 Bacteria 67554
140 Ga0453684_0002759 3300044712 Bacteria 41579
141 Ga0453684_0004545 3300044712 Bacteria 29061
142 Ga0453684_0012551 3300044712 Bacteria 13947
143 Ga0453684_0017435 3300044712 Bacteria 11124
144 Ga0453684_0029255 3300044712 Bacteria 7834
145 Ga0453684_0040728 3300044712 Bacteria 6302
146 Ga0453684_0047923 3300044712 Bacteria 5659
147 Ga0453684_0069418 3300044712 Bacteria 4469
148 Ga0453684_0101881 3300044712 Bacteria 3512
149 Ga0453684_0133884 3300044712 Bacteria 2970
150 Ga0453684_0141736 3300044712 Unclassified 2869
151 Ga0453684_0161479 3300044712 Bacteria 2650
152 Ga0453684_0209066 3300044712 Bacteria 2270
153 Ga0453684_0219427 3300044712 Bacteria 2204
154 Ga0453684_0232716 3300044712 Viruses 2126
155 Ga0453684_0245089 3300044712 Bacteria 2061
156 Ga0453684_0261581 3300044712 Bacteria 1981
157 Ga0453684_0269640 3300044712 Bacteria 1946
158 Ga0453684_0352983 3300044712 Bacteria 1658
159 Ga0453684_0394336 3300044712 Bacteria 1552
160 Ga0453684_0552304 3300044712 Bacteria 1268
161 Ga0453684_0563434 3300044712 Bacteria 1253
162 Ga0451576_0000258 3300045051 Bacteria 129651
163 Ga0451576_0002794 3300045051 Bacteria 25196
164 Ga0451576_0051994 3300045051 Bacteria 4294
165 Ga0451576_0080378 3300045051 Bacteria 3391
166 Ga0451576_0101029 3300045051 Bacteria 2999
167 Ga0451576_0315955 3300045051 Bacteria 1634
168 Ga0451576_0583102 3300045051 Bacteria 1175
169 Ga0451576_0611333 3300045051 Unclassified 1146
170 Ga0495587_0253483 3300046536 Bacteria 989
171 Ga0495667_0242120 3300046559 Unclassified 1149
172 Ga0496108_0218198 3300048911 Unclassified 1657
173 Ga0501036_0261795 3300049572 Bacteria 1449
174 Ga0501040_0165738 3300049576 Unclassified 1563
175 Ga0501040_0351625 3300049576 Bacteria 1056
176 Ga0501042_0387203 3300049578 Bacteria 1013
177 Ga0501048_0178170 3300049582 Unclassified 1507
178 Ga0501068_0138352 3300049584 Bacteria 1526
179 Ga0501071_0039842 3300049587 Bacteria 3362
180 Ga0501071_0194689 3300049587 Bacteria 1521
181 Ga0501072_0263198 3300049588 Unclassified 1373
182 Ga0501075_0109702 3300049591 Bacteria 2098
183 Ga0501076_0022571 3300049592 Bacteria 4838
184 Ga0501077_0112526 3300049593 Bacteria 1726
185 Ga0501079_0042160 3300049741 Unclassified 3525
186 Ga0501079_0116143 3300049741 Bacteria 2080
187 Ga0501080_0133911 3300049742 Bacteria 2294
188 Ga0501081_0031090 3300049743 Unclassified 3618
189 Ga0501081_0035185 3300049743 Bacteria 3409
190 Ga0501045_0278895 3300049824 Bacteria 1244
191 Ga0501045_0306164 3300049824 Unclassified 1183
192 Ga0501045_0320821 3300049824 Unclassified 1153
193 nmdc:mga0yw44_124455_c1 3300050492 Bacteria 1663
194 nmdc:mga05p37_123229_c1 3300050507 Unclassified 3184
195 nmdc:mga05p37_299349_c1 3300050507 Bacteria 1912
196 nmdc:mga05p37_379388_c1 3300050507 Bacteria 1657
197 nmdc:mga05p37_65089_c1 3300050507 Unclassified 4486
198 nmdc:mga05p37_70395_c1 3300050507 Bacteria 4303
199 nmdc:mga09592_16855_c1 3300050508 Bacteria 5979
200 nmdc:mga09592_65462_c1 3300050508 Bacteria 3079
201 nmdc:mga06r32_26049_c1 3300050510 Bacteria 5448
202 nmdc:mga06r32_302934_c1 3300050510 Bacteria 1584
203 nmdc:mga06r32_380043_c1 3300050510 Bacteria 1395
204 nmdc:mga08y16_216916_c1 3300050511 Bacteria 1981
205 nmdc:mga0n895_270936_c1 3300050512 Bacteria 1722
206 nmdc:mga0a205_106824_c1 3300050515 Unclassified 2697
207 nmdc:mga0a205_131786_c1 3300050515 Unclassified 2400
208 Ga0495595_0035517 3300053084 Bacteria 2258
209 Ga0495619_0024474 3300053085 Bacteria 3872
210 Ga0501084_0014124 3300054114 Bacteria 6614
211 Ga0501084_0083072 3300054114 Bacteria 2688
212 Ga0501084_0160009 3300054114 Unclassified 1900
213 Ga0501084_0210915 3300054114 Unclassified 1639
214 Ga0501082_0169839 3300060353 Unclassified 1896
215 Ga0530510_0048180 3300061734 Bacteria 3080
216 Ga0316579_10029653
217 JGI25406J46586_10013881
218 Ga0065704_10078463
219 Ga0065704_10230441
220 Ga0065715_10325602
221 Ga0065707_10081809
222 Ga0065707_10083479
223 Ga0065707_10089479
224 Ga0065707_10220254
225 Ga0070689_100155272
226 Ga0070669_100277846
227 Ga0070705_100067267
228 Ga0070705_100397861
229 Ga0070694_100093024
230 Ga0070694_100182209
231 Ga0070694_100317126
232 Ga0070706_100141981
233 Ga0070707_100152428
234 Ga0070698_100010333
235 Ga0070698_100019427
236 Ga0070698_100044938
237 Ga0070698_100184605
238 Ga0070699_100000855
239 Ga0070699_100053785
240 Ga0070699_100057957
241 Ga0070697_100170878
242 Ga0070704_100039365
243 Ga0068857_100164712
244 Ga0068859_100008852
245 Ga0068858_100219780
246 Ga0068862_100020446
247 Ga0081539_10001287
248 Ga0075427_10002310
249 Ga0075428_100067458
250 Ga0075428_100105538
251 Ga0075430_100169207
252 Ga0075431_100347320
253 Ga0075431_100684830
254 Ga0075433_10052162
255 Ga0075433_10145586
256 Ga0075433_10245813
257 Ga0075433_10282362
258 Ga0075429_100013988
259 Ga0075429_100025875
260 Ga0075429_100058465
261 Ga0075429_100178208
262 Ga0075429_100190026
263 Ga0097620_100008852
264 Ga0111539_10258781
265 Ga0114129_10001261
266 Ga0114129_10008182
267 Ga0114129_10036573
268 Ga0114129_10054961
269 Ga0114129_10137376
270 Ga0114129_10416194
271 Ga0114129_10442917
272 Ga0114129_10477026
273 Ga0114129_10715128
274 Ga0114129_11110470
275 Ga0105243_10262805
276 Ga0105246_10042235
277 Ga0207646_10088281
278 Ga0207708_10021726
279 Ga0207674_10149504
280 Ga0207675_100257131
281 Ga0268265_10024957
282 Ga0268265_10182831
283 Ga0268265_10260985
284 Ga0265326_10013003
285 Ga0265334_10056255
286 Ga0265336_10060841
287 Ga0265338_10285451
288 Ga0265324_10044521
289 Ga0265332_10127338
290 Ga0265320_10006959
291 Ga0265325_10017093
292 Ga0265329_10006433
293 Ga0265339_10069934
294 Ga0265339_10094045
295 Ga0265331_10003040
296 Ga0265331_10109689
297 Ga0265316_10026790
298 Ga0265316_10045471
299 Ga0265316_10191274
300 Ga0265313_10078157
301 Ga0316575_10052980
302 Ga0316579_10001529
303 Ga0316579_10062576
304 Ga0265314_10107994
305 Ga0265342_10092688
306 Ga0316576_10084369
307 Ga0316576_10171346
308 Ga0316578_10162729
309 Ga0316578_10341658
310 Ga0316577_10003694
311 Ga0316577_10037745
312 Ga0316577_10293370
313 Ga0307413_10448539
314 Ga0307409_100146214
315 Ga0307416_100169638
316 Ga0307415_100433471
317 Ga0316585_10038169
318 Ga0316580_10111837
319 Ga0316574_0000534
320 Ga0316574_0036785
321 Ga0316574_0083455
322 Ga0373937_0490808
323 Ga0316582_0015747
324 Ga0316582_0026312
325 Ga0316582_0106102
326 Ga0316582_0164461
327 Ga0316584_0017526
328 Ga0316584_0035001
329 Ga0316584_0134136
330 Ga0316584_0182373
331 Ga0316584_0391642
332 Ga0316581_0011129
333 Ga0316581_0092725
334 Ga0451577_0005140
335 Ga0451577_0008275
336 Ga0451577_0029462
337 Ga0451577_0059233
338 Ga0451577_0132192
339 Ga0451577_0185587
340 Ga0451577_0191646
341 Ga0451577_0311588
342 Ga0451577_0399585
343 Ga0451577_0407815
344 Ga0453683_0000682
345 Ga0453683_0002565
346 Ga0453683_0016129
347 Ga0453683_0129140
348 Ga0453684_0000012
349 Ga0453684_0000053
350 Ga0453684_0000164
351 Ga0453684_0000685
352 Ga0453684_0000962
353 Ga0453684_0001379
354 Ga0453684_0001447
355 Ga0453684_0002759
356 Ga0453684_0004545
357 Ga0453684_0012551
358 Ga0453684_0017435
359 Ga0453684_0029255
360 Ga0453684_0040728
361 Ga0453684_0047923
362 Ga0453684_0069418
363 Ga0453684_0101881
364 Ga0453684_0133884
365 Ga0453684_0141736
366 Ga0453684_0161479
367 Ga0453684_0209066
368 Ga0453684_0219427
369 Ga0453684_0232716
370 Ga0453684_0245089
371 Ga0453684_0261581
372 Ga0453684_0269640
373 Ga0453684_0352983
374 Ga0453684_0394336
375 Ga0453684_0552304
376 Ga0453684_0563434
377 Ga0451576_0000258
378 Ga0451576_0002794
379 Ga0451576_0051994
380 Ga0451576_0080378
381 Ga0451576_0101029
382 Ga0451576_0315955
383 Ga0451576_0583102
384 Ga0451576_0611333
385 Ga0495587_0253483
386 Ga0495667_0242120
387 Ga0496108_0218198
388 Ga0501036_0261795
389 Ga0501040_0165738
390 Ga0501040_0351625
391 Ga0501042_0387203
392 Ga0501048_0178170
393 Ga0501068_0138352
394 Ga0501071_0039842
395 Ga0501071_0194689
396 Ga0501072_0263198
397 Ga0501075_0109702
398 Ga0501076_0022571
399 Ga0501077_0112526
400 Ga0501079_0042160
401 Ga0501079_0116143
402 Ga0501080_0133911
403 Ga0501081_0031090
404 Ga0501081_0035185
405 Ga0501045_0278895
406 Ga0501045_0306164
407 Ga0501045_0320821
408 nmdc:mga0yw44_124455_c1
409 nmdc:mga05p37_123229_c1
410 nmdc:mga05p37_299349_c1
411 nmdc:mga05p37_379388_c1
412 nmdc:mga05p37_65089_c1
413 nmdc:mga05p37_70395_c1
414 nmdc:mga09592_16855_c1
415 nmdc:mga09592_65462_c1
416 nmdc:mga06r32_26049_c1
417 nmdc:mga06r32_302934_c1
418 nmdc:mga06r32_380043_c1
419 nmdc:mga08y16_216916_c1
420 nmdc:mga0n895_270936_c1
421 nmdc:mga0a205_106824_c1
422 nmdc:mga0a205_131786_c1
423 Ga0495595_0035517
424 Ga0495619_0024474
425 Ga0501084_0014124
426 Ga0501084_0083072
427 Ga0501084_0160009
428 Ga0501084_0210915
429 Ga0501082_0169839
430 Ga0530510_0048180

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF11967

RecO_N

Recombination protein O N terminal

12

89

0.97

PF02565

RecO_C

Recombination protein O C terminal

93

250

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
4jcv-assembly1.cif.gz_E crystal structure of the recor complex in an open conformation 0.8609 7 235
1u5k-assembly1.cif.gz_A recombinational repair protein reco 0.8559 7 250
4jcv-assembly1.cif.gz_F crystal structure of the recor complex in an open conformation 0.849 9 235
2v1c-assembly1.cif.gz_C-2 crystal structure and mutational study of recor provide insight into its role in dna repair 0.8475 7 250
4jcv-assembly1.cif.gz_E crystal structure of the recor complex in an open conformation 0.8426 7 235
ID Description Score Start End Superfamily
af_P9WHI5_1_82_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9246 7 82 2.40.50.140
3q8dB01 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.8889 10 81 2.40.50.140
af_Q2FY07_1_75_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.8781 9 81 2.40.50.140
4jcvF01 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.8543 9 79 2.40.50.140
af_P9WHI5_1_82_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.8503 7 82 2.40.50.140
ID Description Score Start End GO Terms
AF-A0A3D1KIX7-F1-model_v4 DNA repair protein RecO (Recombination protein O) 0.958 8 151 GO:0006302
GO:0006310
GO:0043590
AF-X1CXZ8-F1-model_v4 DNA repair protein RecO (Recombination protein O) 0.9559 4 233 GO:0006302
GO:0006310
GO:0043590
AF-A0A7V8VYK0-F1-model_v4 DNA repair protein RecO (Recombination protein O) 0.9556 7 199 GO:0006302
GO:0006310
GO:0043590
AF-A0A349CIT2-F1-model_v4 DNA repair protein RecO 0.9555 48 211 GO:0006302
GO:0006310
GO:0043590
AF-A0A1F7JIF1-F1-model_v4 DNA repair protein RecO (Recombination protein O) 0.9546 8 150 GO:0006302
GO:0006310
GO:0043590

Map