F326364

General Info

Members Datasets Scaffolds Average Seq Length
215 177 198 253

Family's Representative Sequence

Representative Sequence 3300009094|Ga0111539_10262935|Ga0111539_102629352
Length 266
Sequence MRKLVSAPKPRLLLSRRNVLVSGAATLILGGCDRLAESPTFQEMLRGAEKLTYGSQRTLIGRQALAREYTEADISERFKANGSQDPNNLPPEYMELANNGYADWRLQVDGLVMNPMSFSLADLRALNARTQITRHDCVEGWSAIGSWTGPPLSAVLDRVGLRPEARFIVFHCADEVLVYIEGRDPYYESIDLIDAFHPQTILAYAMNGKPLELKHGAPLRVRVERQLGYKMAKFITRIEAVNRFDNIRGGRGGYWEDSGYEWYAGI

Samples

Sample ID Description Type Environment
1 2512564014 Sphingobium sp. AP49 Isolate Rhizosphere
2 2582581299 Rhizobium leguminosarum OV483 Isolate Rhizosphere
3 2582581304 Rhizobium sp. YR519 Isolate Rhizosphere
4 2615840698 Rhizobium multihospitium HAMBI 2975 Isolate Nodule
5 2643221634 Rhizobium sp. Root1203 Isolate Unclassified
6 2734482264 Dyella sp. AD052 Isolate Unclassified
7 2738541293 Rhizobium sp. GV031 Isolate Unclassified
8 2838029111 Rhizobium tropici SEMIA 4079 Isolate Nodule
9 2842475841 Rhizobium tropici SEMIA 4059 Isolate Nodule
10 2842502639 Rhizobium tropici SEMIA 4063 Isolate Nodule
11 2885429604 Sphingomonas sp. WZY 27 Isolate Rhizosphere
12 3005416602 Rhizobium sp. P40RR-XXII Isolate Rhizosphere
13 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
14 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
15 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
16 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
17 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
18 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
19 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
20 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
21 3300003162 Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_21 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
22 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
23 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
24 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
25 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
26 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
27 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
28 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
29 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
30 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
31 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
32 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
33 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
34 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
35 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
36 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
37 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
38 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
39 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
40 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
41 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
42 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
43 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
44 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
45 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
47 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
48 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
60 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
61 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
62 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
63 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
64 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
66 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
67 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
68 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
80 3300027378 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
82 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
83 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
86 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
87 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
88 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
89 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
90 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
91 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
92 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
93 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
94 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
95 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
96 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
97 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
98 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
99 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
100 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
101 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
102 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
103 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
104 3300042147 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_080116_2618 Metagenome Rhizosphere
105 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
106 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
107 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
108 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
109 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
110 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
111 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
112 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
113 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
114 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
115 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
116 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
117 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
118 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
119 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
120 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
121 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
122 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
123 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
124 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
125 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
126 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
127 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
128 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
129 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
130 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
131 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
132 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
133 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
134 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
135 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
136 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
137 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
138 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
139 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
140 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
141 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
142 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
143 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
144 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
145 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
146 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
147 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
148 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
149 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
150 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
154 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
155 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
156 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
157 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
158 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
159 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
160 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
161 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
162 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
163 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
164 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
165 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
166 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
167 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
168 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
169 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
170 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
171 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
172 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
173 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
174 8005314921 Rhizobium sp. P28RR-XV Isolate Rhizosphere
175 8005484373 Rhizobium tropici SARCC-755 Isolate Nodule
176 8005682033 Rhizobium dioscoreae S-93 Isolate Unclassified
177 8045864390 Aurantimonas endophytica KCTC 52296 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 91.16
Metatranscriptomes 0.93
Isolates 7.91

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.09
Nodule 2.79
Rhizoplane 4.65
Rhizosphere 66.98
Stem 0
Stem Tuber 0
Unclassified 13.49

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10000018 3300001979 Bacteria 55932
2 JGI25155J39150_1000410 3300002704 Bacteria 11752
3 JGI25156J39149_1001161 3300002705 Bacteria 11752
4 JGI25162J39368_1000880 3300002737 Bacteria 19671
5 JGI25154J39366_1000970 3300002738 Bacteria 11752
6 JGI25157J39369_1001132 3300002741 Bacteria 11752
7 JGI25152J39213_1001627 3300002773 Bacteria 9370
8 JGI25159J45721_1000695 3300002987 Bacteria 14706
9 JGI25159J45721_1002914 3300002987 Bacteria 6237
10 Ga0006778J45830_1019162 3300003162 Bacteria 2182
11 rootL2_10002250 3300003322 Bacteria 18440
12 Ga0055526_1007775 3300003771 Bacteria 5498
13 Ga0070670_100000451 3300005331 Bacteria 33238
14 Ga0068868_100193471 3300005338 Bacteria 1692
15 Ga0070689_100172850 3300005340 Bacteria 1751
16 Ga0070668_100031269 3300005347 Bacteria 4050
17 Ga0070675_100431102 3300005354 Bacteria 1180
18 Ga0070673_100126529 3300005364 Bacteria 2139
19 Ga0070673_100540447 3300005364 Bacteria 1058
20 Ga0070713_100109253 3300005436 Bacteria 2409
21 Ga0070711_100459108 3300005439 Bacteria 1044
22 Ga0070662_100074931 3300005457 Bacteria 2505
23 Ga0070681_10072757 3300005458 Bacteria 3400
24 Ga0070681_10336062 3300005458 Bacteria 1420
25 Ga0068853_100227858 3300005539 Bacteria 1704
26 Ga0068853_100769290 3300005539 Bacteria 921
27 Ga0070665_100009415 3300005548 Bacteria 9886
28 Ga0070665_100087987 3300005548 Bacteria 3112
29 Ga0068855_100510389 3300005563 Bacteria 1305
30 Ga0068855_100887685 3300005563 Bacteria 942
31 Ga0070664_100058242 3300005564 Bacteria 3286
32 Ga0068856_100120009 3300005614 Bacteria 2631
33 Ga0068856_100860061 3300005614 Bacteria 926
34 Ga0068864_100017921 3300005618 Bacteria 5907
35 Ga0068863_100075573 3300005841 Bacteria 3187
36 Ga0068862_100111667 3300005844 Bacteria 2400
37 Ga0075368_10000123 3300006042 Bacteria 20433
38 Ga0075363_100093301 3300006048 Bacteria 1659
39 Ga0075367_10000028 3300006178 Bacteria 31226
40 Ga0075367_10161499 3300006178 Bacteria 1393
41 Ga0097621_100008945 3300006237 Bacteria 7241
42 Ga0068871_100112740 3300006358 Bacteria 2289
43 Ga0075428_100191533 3300006844 Bacteria 2211
44 Ga0075430_100231972 3300006846 Bacteria 1530
45 Ga0075430_100528760 3300006846 Bacteria 973
46 Ga0105240_10430288 3300009093 Bacteria 1481
47 Ga0111539_10092584 3300009094 Bacteria 3552
48 Ga0111539_10117586 3300009094 Bacteria 3116
49 Ga0111539_10262935 3300009094 Bacteria 2009
50 Ga0105245_10414018 3300009098 Bacteria 1349
51 Ga0105248_10049571 3300009177 Bacteria 4710
52 Ga0105238_10007115 3300009551 Bacteria 11194
53 Ga0105249_10328576 3300009553 Bacteria 1542
54 Ga0157378_10022677 3300013297 Bacteria 5526
55 Ga0163162_10041543 3300013306 Bacteria 4602
56 Ga0157375_10056111 3300013308 Bacteria 3887
57 Ga0157375_10621904 3300013308 Bacteria 1238
58 Ga0163163_10125054 3300014325 Bacteria 2609
59 Ga0163163_10934171 3300014325 Bacteria 931
60 Ga0157380_10369420 3300014326 Bacteria 1349
61 Ga0213876_10062900 3300021384 Bacteria 1959
62 Ga0209435_100308 3300025206 Bacteria 11806
63 Ga0209646_1000717 3300025246 Bacteria 11806
64 Ga0209026_1001224 3300025250 Bacteria 11806
65 Ga0209148_1008017 3300025254 Bacteria 2151
66 Ga0209759_1001641 3300025256 Bacteria 11806
67 Ga0209130_1000529 3300025284 Bacteria 38514
68 Ga0207426_1000098 3300025302 Bacteria 264264
69 Ga0207695_10463365 3300025913 Bacteria 1150
70 Ga0207694_10007700 3300025924 Bacteria 8162
71 Ga0207644_10034124 3300025931 Bacteria 3560
72 Ga0207706_10080073 3300025933 Bacteria 2872
73 Ga0207711_10070507 3300025941 Bacteria 3031
74 Ga0207667_10090141 3300025949 Bacteria 3169
75 Ga0207667_10161321 3300025949 Bacteria 2306
76 Ga0207668_10022158 3300025972 Bacteria 4062
77 Ga0207668_10409793 3300025972 Bacteria 1148
78 Ga0207658_10182020 3300025986 Bacteria 1740
79 Ga0207702_10180843 3300026078 Bacteria 1942
80 Ga0207641_10017208 3300026088 Bacteria 5915
81 Ga0207676_10020871 3300026095 Bacteria 4799
82 Ga0209281_1022113 3300027111 Bacteria 1222
83 Ga0209981_1000426 3300027378 Bacteria 5382
84 Ga0209813_10000019 3300027866 Bacteria 75575
85 Ga0207428_10182190 3300027907 Bacteria 1586
86 Ga0268266_10010913 3300028379 Bacteria 7908
87 Ga0268265_10013754 3300028380 Bacteria 5507
88 Ga0268265_10090247 3300028380 Bacteria 2447
89 Ga0265337_1001730 3300028556 Bacteria 10556
90 Ga0265334_10000827 3300028573 Bacteria 15475
91 Ga0307517_10000813 3300028786 Bacteria 53669
92 Ga0265338_10010641 3300028800 Bacteria 10751
93 Ga0265770_1036548 3300030878 Bacteria 844
94 Ga0307513_10001018 3300031456 Bacteria 40592
95 Ga0307513_10013833 3300031456 Bacteria 9890
96 Ga0307513_10465703 3300031456 Bacteria 986
97 Ga0307412_10037143 3300031911 Bacteria 3127
98 Ga0307510_10009033 3300033180 Bacteria 11868
99 Ga0373956_0171463 3300035119 Bacteria 1024
100 Ga0373955_0330570 3300035172 Bacteria 922
101 Ga0373925_0079555 3300037068 Bacteria 2491
102 Ga0395899_0000052 3300037312 Bacteria 221643
103 Ga0395900_0000002 3300037418 Bacteria 671103
104 Ga0395898_0035355 3300037466 Bacteria 4968
105 Ga0395905_0007645 3300037471 Bacteria 10727
106 Ga0395905_0015429 3300037471 Bacteria 7263
107 Ga0395901_0000013 3300038443 Bacteria 375733
108 Ga0436365_0074743 3300039437 Bacteria 2071
109 Ga0436361_0688515 3300039447 Bacteria 4437
110 Ga0436363_0915980 3300039450 Bacteria 3469
111 Ga0450910_018593 3300042147 Bacteria 1039
112 Ga0439446_0004945 3300042156 Bacteria 3407
113 Ga0439460_0012140 3300042461 Bacteria 2230
114 Ga0453684_0000062 3300044712 Bacteria 487590
115 Ga0495603_0174071 3300046455 Bacteria 1246
116 Ga0495629_0123371 3300046459 Bacteria 1804
117 Ga0495638_0000012 3300046460 Bacteria 435577
118 Ga0495638_0008987 3300046460 Bacteria 7043
119 Ga0495650_0006936 3300046471 Bacteria 6933
120 Ga0495582_0184987 3300046473 Bacteria 1188
121 Ga0495664_0330939 3300046477 Bacteria 918
122 Ga0495585_0024418 3300046492 Bacteria 3466
123 Ga0495585_0192718 3300046492 Bacteria 1042
124 Ga0495583_0000411 3300046506 Bacteria 65040
125 Ga0495583_0001176 3300046506 Bacteria 28259
126 Ga0495583_0004718 3300046506 Bacteria 9589
127 Ga0495583_0092850 3300046506 Bacteria 1297
128 Ga0495606_0080334 3300046507 Bacteria 2029
129 Ga0495610_0000467 3300046512 Bacteria 41686
130 Ga0495610_0074373 3300046512 Bacteria 1576
131 Ga0495628_0119978 3300046516 Bacteria 2018
132 Ga0495631_0000034 3300046518 Bacteria 84600
133 Ga0495632_0000832 3300046519 Bacteria 27194
134 Ga0495632_0004177 3300046519 Bacteria 9886
135 Ga0495632_0057643 3300046519 Bacteria 1895
136 Ga0495648_0000038 3300046524 Bacteria 191612
137 Ga0495648_0008181 3300046524 Bacteria 8254
138 Ga0495586_0096266 3300046535 Bacteria 1639
139 Ga0495645_0025049 3300046543 Bacteria 4330
140 Ga0495611_0000017 3300046648 Bacteria 128087
141 Ga0495611_0055131 3300046648 Bacteria 1798
142 Ga0495625_0007408 3300046660 Bacteria 9558
143 Ga0495669_0000247 3300046684 Bacteria 31682
144 Ga0495624_0198624 3300046690 Bacteria 1219
145 Ga0495671_0000034 3300046692 Bacteria 195385
146 Ga0495674_0228608 3300047319 Bacteria 1536
147 Ga0495673_0000013 3300047469 Bacteria 612902
148 Ga0495673_0000030 3300047469 Bacteria 468915
149 Ga0495686_0032321 3300047472 Bacteria 3387
150 Ga0495686_0034565 3300047472 Bacteria 3254
151 Ga0495686_0049297 3300047472 Bacteria 2650
152 Ga0495626_0003022 3300048091 Bacteria 11092
153 Ga0496100_0067533 3300048903 Bacteria 2375
154 Ga0496101_0027937 3300048904 Bacteria 3935
155 Ga0496102_0014218 3300048905 Bacteria 6916
156 Ga0496104_0248081 3300048907 Bacteria 1693
157 Ga0496105_0222670 3300048908 Bacteria 1536
158 Ga0496108_0005891 3300048911 Bacteria 9937
159 Ga0496109_0009685 3300048912 Bacteria 8223
160 Ga0496112_0022308 3300048915 Bacteria 6032
161 Ga0496113_0198748 3300048916 Bacteria 1593
162 Ga0496115_0173619 3300048918 Bacteria 1782
163 Ga0496118_0007812 3300048921 Bacteria 11222
164 Ga0496121_0324308 3300048924 Bacteria 1036
165 Ga0496122_0020698 3300048925 Bacteria 5926
166 Ga0496123_0063116 3300048926 Bacteria 2369
167 Ga0496124_0000072 3300048927 Bacteria 219914
168 Ga0496124_0094952 3300048927 Bacteria 2424
169 Ga0496126_0132377 3300048929 Bacteria 2154
170 Ga0495678_055002 3300049459 Bacteria 1521
171 Ga0501046_0338801 3300049580 Bacteria 1093
172 Ga0501047_0005821 3300049581 Bacteria 11601
173 Ga0501048_0235416 3300049582 Bacteria 1299
174 Ga0501071_0505691 3300049587 Bacteria 927
175 Ga0501072_0260348 3300049588 Bacteria 1381
176 Ga0501075_0272785 3300049591 Bacteria 1289
177 Ga0501075_0316559 3300049591 Bacteria 1189
178 Ga0501076_0104983 3300049592 Bacteria 2280
179 Ga0501079_0370080 3300049741 Bacteria 1123
180 Ga0501081_0421293 3300049743 Bacteria 990
181 Ga0501044_0004561 3300049823 Bacteria 15493
182 nmdc:mga03n38_60675_c1 3300050490 Bacteria 1720
183 nmdc:mga06z11_255_c1 3300050494 Bacteria 20756
184 nmdc:mga06z11_58303_c1 3300050494 Bacteria 2003
185 nmdc:mga04h51_62_c1 3300050495 Bacteria 34326
186 nmdc:mga07m45_37505_c1 3300050496 Bacteria 2703
187 nmdc:mga0qj67_456760_c1 3300050509 Bacteria 1028
188 nmdc:mga08y16_145198_c1 3300050511 Bacteria 2466
189 nmdc:mga08y16_63847_c1 3300050511 Bacteria 3846
190 Ga0500643_005752 3300053087 Bacteria 5291
191 Ga0500641_0004791 3300053096 Bacteria 4791
192 Ga0500559_0005320 3300053136 Bacteria 5930
193 Ga0500624_000076 3300053157 Bacteria 55457
194 Ga0500633_0000688 3300053160 Bacteria 5697
195 Ga0500636_0027123 3300053177 Bacteria 3382
196 Ga0500636_0183246 3300053177 Bacteria 1122
197 Ga0501084_0886980 3300054114 Bacteria 750
198 Ga0500661_001241 3300055283 Bacteria 4763

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009094 Ga0111539_10092584 Ga0111539_100925842 219
2 3300046690 Ga0495624_0198624 Ga0495624_0198624_10_678 221
3 3300054114 Ga0501084_0886980 Ga0501084_0886980_32_712 225
4 3300046492 Ga0495585_0024418 Ga0495585_0024418_2713_3447 227
5 3300049580 Ga0501046_0338801 Ga0501046_0338801_90_788 231
6 3300049591 Ga0501075_0316559 Ga0501075_0316559_136_834 231
7 3300049592 Ga0501076_0104983 Ga0501076_0104983_297_995 231
8 3300049741 Ga0501079_0370080 Ga0501079_0370080_223_921 231
9 3300006237 Ga0097621_100008945 Ga0097621_1000089453 232
10 3300013297 Ga0157378_10022677 Ga0157378_100226774 232
11 3300005458 Ga0070681_10336062 Ga0070681_103360622 233
12 3300046460 Ga0495638_0008987 Ga0495638_0008987_1142_1903 236
13 3300046471 Ga0495650_0006936 Ga0495650_0006936_5314_6075 236
14 3300046512 Ga0495610_0074373 Ga0495610_0074373_498_1259 236
15 3300046518 Ga0495631_0000034 Ga0495631_0000034_66887_67648 236
16 3300046519 Ga0495632_0057643 Ga0495632_0057643_181_942 236
17 3300046524 Ga0495648_0008181 Ga0495648_0008181_4652_5413 236
18 3300046648 Ga0495611_0000017 Ga0495611_0000017_115561_116322 236
19 3300046660 Ga0495625_0007408 Ga0495625_0007408_5593_6354 236
20 3300047469 Ga0495673_0000030 Ga0495673_0000030_365207_365968 236
21 3300047472 Ga0495686_0032321 Ga0495686_0032321_1981_2742 236
22 3300053160 Ga0500633_0000688 Ga0500633_0000688_209_970 236
23 3300006844 Ga0075428_100191533 Ga0075428_1001915332 239
24 3300009093 Ga0105240_10430288 Ga0105240_104302882 242
25 3300009551 Ga0105238_10007115 Ga0105238_1000711510 242
26 3300025924 Ga0207694_10007700 Ga0207694_100077009 242
27 3300006846 Ga0075430_100528760 Ga0075430_1005287602 243
28 iso_pu_bacteria 2512564014 2512644445 243
29 iso_pu_bacteria 2885429604 2885430980 243
30 3300006042 Ga0075368_10000123 Ga0075368_1000012320 246
31 3300006048 Ga0075363_100093301 Ga0075363_1000933012 246
32 3300006178 Ga0075367_10000028 Ga0075367_1000002819 246
33 3300027866 Ga0209813_10000019 Ga0209813_100000192 246
34 3300039450 Ga0436363_0915980 Ga0436363_0915980_2582_3328 246
35 3300042461 Ga0439460_0012140 Ga0439460_0012140_352_1101 246
36 3300050490 nmdc:mga03n38_60675_c1 nmdc:mga03n38_60675_c1_286_1032 246
37 3300050494 nmdc:mga06z11_255_c1 nmdc:mga06z11_255_c1_8257_9003 246
38 3300050495 nmdc:mga04h51_62_c1 nmdc:mga04h51_62_c1_11720_12466 246
39 3300050496 nmdc:mga07m45_37505_c1 nmdc:mga07m45_37505_c1_1514_2260 246
40 iso_pu_bacteria 2734482264 2735836210 247
41 3300049587 Ga0501071_0505691 Ga0501071_0505691_27_779 248
42 3300049743 Ga0501081_0421293 Ga0501081_0421293_141_893 248
43 iso_pu_bacteria 8045864390 8045869144 248
44 3300053087 Ga0500643_005752 Ga0500643_005752_2343_3098 249
45 3300053157 Ga0500624_000076 Ga0500624_000076_26775_27530 249
46 3300053177 Ga0500636_0027123 Ga0500636_0027123_621_1376 249
47 3300053177 Ga0500636_0183246 Ga0500636_0183246_64_819 249
48 3300005563 Ga0068855_100887685 Ga0068855_1008876852 250
49 3300025913 Ga0207695_10463365 Ga0207695_104633652 250
50 3300030878 Ga0265770_1036548 Ga0265770_10365481 250
51 3300005354 Ga0070675_100431102 Ga0070675_1004311021 251
52 3300006846 Ga0075430_100231972 Ga0075430_1002319722 251
53 3300042147 Ga0450910_018593 Ga0450910_018593_99_860 251
54 3300042156 Ga0439446_0004945 Ga0439446_0004945_1786_2547 251
55 3300005548 Ga0070665_100009415 Ga0070665_10000941511 252
56 3300028379 Ga0268266_10010913 Ga0268266_100109135 252
57 3300046460 Ga0495638_0000012 Ga0495638_0000012_161643_162407 252
58 3300046506 Ga0495583_0000411 Ga0495583_0000411_35120_35884 252
59 3300046519 Ga0495632_0000832 Ga0495632_0000832_19974_20738 252
60 3300046524 Ga0495648_0000038 Ga0495648_0000038_29206_29970 252
61 3300046692 Ga0495671_0000034 Ga0495671_0000034_29136_29900 252
62 3300047469 Ga0495673_0000013 Ga0495673_0000013_101837_102601 252
63 3300053136 Ga0500559_0005320 Ga0500559_0005320_1761_2522 252
64 3300055283 Ga0500661_001241 Ga0500661_001241_2579_3340 252
65 3300005436 Ga0070713_100109253 Ga0070713_1001092532 253
66 3300009094 Ga0111539_10117586 Ga0111539_101175863 253
67 3300014326 Ga0157380_10369420 Ga0157380_103694202 253
68 3300027907 Ga0207428_10182190 Ga0207428_101821902 253
69 3300035119 Ga0373956_0171463 Ga0373956_0171463_175_942 253
70 3300035172 Ga0373955_0330570 Ga0373955_0330570_74_841 253
71 3300046506 Ga0495583_0001176 Ga0495583_0001176_6843_7619 253
72 3300049588 Ga0501072_0260348 Ga0501072_0260348_308_1072 253
73 3300049591 Ga0501075_0272785 Ga0501075_0272785_204_974 253
74 3300050509 nmdc:mga0qj67_456760_c1 nmdc:mga0qj67_456760_c1_41_811 253
75 3300050511 nmdc:mga08y16_63847_c1 nmdc:mga08y16_63847_c1_2906_3676 253
76 3300005347 Ga0070668_100031269 Ga0070668_1000312692 254
77 3300005364 Ga0070673_100126529 Ga0070673_1001265293 254
78 3300005439 Ga0070711_100459108 Ga0070711_1004591081 254
79 3300025972 Ga0207668_10022158 Ga0207668_100221582 254
80 3300028380 Ga0268265_10013754 Ga0268265_100137541 254
81 3300037068 Ga0373925_0079555 Ga0373925_0079555_461_1231 254
82 3300044712 Ga0453684_0000062 Ga0453684_0000062_183513_184286 254
83 3300046473 Ga0495582_0184987 Ga0495582_0184987_214_984 254
84 iso_pu_bacteria 2582581299 2585229358 254
85 iso_pu_bacteria 2582581299 2585230269 254
86 iso_pu_bacteria 2582581304 2585259322 254
87 iso_pu_bacteria 2615840698 2616553124 254
88 iso_pu_bacteria 2643221634 2644192099 254
89 iso_pu_bacteria 2738541293 2738805924 254
90 iso_pu_bacteria 2838029111 2838030347 254
91 iso_pu_bacteria 2842475841 2842477374 254
92 iso_pu_bacteria 2842502639 2842504170 254
93 iso_pu_bacteria 3005416602 3005419826 254
94 iso_pu_bacteria 8005314921 8005316392 254
95 iso_pu_bacteria 8005484373 8005486358 254
96 iso_pu_bacteria 8005682033 8005686082 254
97 3300002987 JGI25159J45721_1002914 JGI25159J45721_10029142 255
98 3300009094 Ga0111539_10262935 Ga0111539_102629352 255
99 3300025284 Ga0209130_1000529 Ga0209130_100052927 255
100 3300025302 Ga0207426_1000098 Ga0207426_100009895 255
101 3300050511 nmdc:mga08y16_145198_c1 nmdc:mga08y16_145198_c1_445_1245 255
102 3300053096 Ga0500641_0004791 Ga0500641_0004791_2965_3732 255
103 3300005338 Ga0068868_100193471 Ga0068868_1001934712 256
104 3300005844 Ga0068862_100111667 Ga0068862_1001116673 256
105 3300025949 Ga0207667_10161321 Ga0207667_101613213 256
106 3300025972 Ga0207668_10409793 Ga0207668_104097932 256
107 3300028380 Ga0268265_10090247 Ga0268265_100902472 256
108 3300039447 Ga0436361_0688515 Ga0436361_0688515_947_1723 256
109 3300046516 Ga0495628_0119978 Ga0495628_0119978_942_1712 256
110 3300046543 Ga0495645_0025049 Ga0495645_0025049_1858_2628 256
111 3300047319 Ga0495674_0228608 Ga0495674_0228608_68_838 256
112 3300005340 Ga0070689_100172850 Ga0070689_1001728501 257
113 3300005364 Ga0070673_100540447 Ga0070673_1005404472 257
114 3300005457 Ga0070662_100074931 Ga0070662_1000749312 257
115 3300005458 Ga0070681_10072757 Ga0070681_100727572 257
116 3300005539 Ga0068853_100227858 Ga0068853_1002278582 257
117 3300005563 Ga0068855_100510389 Ga0068855_1005103892 257
118 3300005564 Ga0070664_100058242 Ga0070664_1000582426 257
119 3300005614 Ga0068856_100860061 Ga0068856_1008600611 257
120 3300005618 Ga0068864_100017921 Ga0068864_1000179214 257
121 3300005841 Ga0068863_100075573 Ga0068863_1000755734 257
122 3300006358 Ga0068871_100112740 Ga0068871_1001127403 257
123 3300009098 Ga0105245_10414018 Ga0105245_104140181 257
124 3300009553 Ga0105249_10328576 Ga0105249_103285762 257
125 3300013306 Ga0163162_10041543 Ga0163162_100415435 257
126 3300013308 Ga0157375_10056111 Ga0157375_100561112 257
127 3300013308 Ga0157375_10621904 Ga0157375_106219041 257
128 3300014325 Ga0163163_10125054 Ga0163163_101250542 257
129 3300014325 Ga0163163_10934171 Ga0163163_109341711 257
130 3300021384 Ga0213876_10062900 Ga0213876_100629002 257
131 3300025931 Ga0207644_10034124 Ga0207644_100341243 257
132 3300025933 Ga0207706_10080073 Ga0207706_100800735 257
133 3300025941 Ga0207711_10070507 Ga0207711_100705071 257
134 3300025949 Ga0207667_10090141 Ga0207667_100901412 257
135 3300025986 Ga0207658_10182020 Ga0207658_101820202 257
136 3300026088 Ga0207641_10017208 Ga0207641_100172086 257
137 3300026095 Ga0207676_10020871 Ga0207676_100208716 257
138 3300027111 Ga0209281_1022113 Ga0209281_10221132 257
139 3300028556 Ga0265337_1001730 Ga0265337_10017308 257
140 3300028573 Ga0265334_10000827 Ga0265334_100008273 257
141 3300028800 Ga0265338_10010641 Ga0265338_100106416 257
142 3300031456 Ga0307513_10001018 Ga0307513_1000101813 257
143 3300037471 Ga0395905_0015429 Ga0395905_0015429_6116_6892 257
144 3300039437 Ga0436365_0074743 Ga0436365_0074743_826_1599 257
145 3300046455 Ga0495603_0174071 Ga0495603_0174071_287_1066 257
146 3300046459 Ga0495629_0123371 Ga0495629_0123371_266_1045 257
147 3300046477 Ga0495664_0330939 Ga0495664_0330939_109_888 257
148 3300046506 Ga0495583_0092850 Ga0495583_0092850_464_1237 257
149 3300046535 Ga0495586_0096266 Ga0495586_0096266_586_1365 257
150 3300046648 Ga0495611_0055131 Ga0495611_0055131_119_892 257
151 3300048091 Ga0495626_0003022 Ga0495626_0003022_9436_10209 257
152 3300048903 Ga0496100_0067533 Ga0496100_0067533_69_842 257
153 3300048905 Ga0496102_0014218 Ga0496102_0014218_3856_4629 257
154 3300048911 Ga0496108_0005891 Ga0496108_0005891_4317_5090 257
155 3300048912 Ga0496109_0009685 Ga0496109_0009685_2420_3193 257
156 3300048915 Ga0496112_0022308 Ga0496112_0022308_1307_2080 257
157 3300048916 Ga0496113_0198748 Ga0496113_0198748_185_958 257
158 3300048918 Ga0496115_0173619 Ga0496115_0173619_590_1363 257
159 3300049581 Ga0501047_0005821 Ga0501047_0005821_8716_9489 257
160 3300049582 Ga0501048_0235416 Ga0501048_0235416_15_788 257
161 3300001979 JGI24740J21852_10000018 JGI24740J21852_1000001859 258
162 3300002704 JGI25155J39150_1000410 JGI25155J39150_10004106 258
163 3300002705 JGI25156J39149_1001161 JGI25156J39149_10011616 258
164 3300002737 JGI25162J39368_1000880 JGI25162J39368_100088013 258
165 3300002738 JGI25154J39366_1000970 JGI25154J39366_100097011 258
166 3300002741 JGI25157J39369_1001132 JGI25157J39369_10011326 258
167 3300002773 JGI25152J39213_1001627 JGI25152J39213_10016277 258
168 3300002987 JGI25159J45721_1000695 JGI25159J45721_10006954 258
169 3300003162 Ga0006778J45830_1019162 Ga0006778J45830_10191622 258
170 3300003322 rootL2_10002250 rootL2_100022503 258
171 3300003771 Ga0055526_1007775 Ga0055526_10077753 258
172 3300005331 Ga0070670_100000451 Ga0070670_10000045120 258
173 3300005539 Ga0068853_100769290 Ga0068853_1007692901 258
174 3300005548 Ga0070665_100087987 Ga0070665_1000879874 258
175 3300005614 Ga0068856_100120009 Ga0068856_1001200092 258
176 3300006178 Ga0075367_10161499 Ga0075367_101614991 258
177 3300009177 Ga0105248_10049571 Ga0105248_100495715 258
178 3300025206 Ga0209435_100308 Ga0209435_1003088 258
179 3300025246 Ga0209646_1000717 Ga0209646_10007178 258
180 3300025250 Ga0209026_1001224 Ga0209026_10012248 258
181 3300025254 Ga0209148_1008017 Ga0209148_10080172 258
182 3300025256 Ga0209759_1001641 Ga0209759_10016418 258
183 3300026078 Ga0207702_10180843 Ga0207702_101808432 258
184 3300027378 Ga0209981_1000426 Ga0209981_10004265 258
185 3300028786 Ga0307517_10000813 Ga0307517_1000081320 258
186 3300031456 Ga0307513_10013833 Ga0307513_1001383311 258
187 3300031456 Ga0307513_10465703 Ga0307513_104657032 258
188 3300031911 Ga0307412_10037143 Ga0307412_100371435 258
189 3300033180 Ga0307510_10009033 Ga0307510_100090337 258
190 3300037312 Ga0395899_0000052 Ga0395899_0000052_219785_220561 258
191 3300037418 Ga0395900_0000002 Ga0395900_0000002_481906_482682 258
192 3300037466 Ga0395898_0035355 Ga0395898_0035355_2705_3481 258
193 3300037471 Ga0395905_0007645 Ga0395905_0007645_3483_4259 258
194 3300038443 Ga0395901_0000013 Ga0395901_0000013_221103_221879 258
195 3300046492 Ga0495585_0192718 Ga0495585_0192718_52_828 258
196 3300046506 Ga0495583_0004718 Ga0495583_0004718_8211_8987 258
197 3300046507 Ga0495606_0080334 Ga0495606_0080334_296_1072 258
198 3300046512 Ga0495610_0000467 Ga0495610_0000467_28744_29520 258
199 3300046519 Ga0495632_0004177 Ga0495632_0004177_3971_4747 258
200 3300046684 Ga0495669_0000247 Ga0495669_0000247_29126_29905 258
201 3300047472 Ga0495686_0034565 Ga0495686_0034565_1512_2288 258
202 3300047472 Ga0495686_0049297 Ga0495686_0049297_1284_2060 258
203 3300048904 Ga0496101_0027937 Ga0496101_0027937_99_875 258
204 3300048907 Ga0496104_0248081 Ga0496104_0248081_34_810 258
205 3300048908 Ga0496105_0222670 Ga0496105_0222670_80_856 258
206 3300048921 Ga0496118_0007812 Ga0496118_0007812_934_1710 258
207 3300048924 Ga0496121_0324308 Ga0496121_0324308_17_793 258
208 3300048925 Ga0496122_0020698 Ga0496122_0020698_4080_4856 258
209 3300048926 Ga0496123_0063116 Ga0496123_0063116_1381_2157 258
210 3300048927 Ga0496124_0000072 Ga0496124_0000072_58433_59209 258
211 3300048927 Ga0496124_0094952 Ga0496124_0094952_1033_1809 258
212 3300048929 Ga0496126_0132377 Ga0496126_0132377_756_1532 258
213 3300049459 Ga0495678_055002 Ga0495678_055002_534_1310 258
214 3300049823 Ga0501044_0004561 Ga0501044_0004561_1236_2012 258
215 3300050494 nmdc:mga06z11_58303_c1 nmdc:mga06z11_58303_c1_417_1193 258

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00174

Oxidored_molyb

Oxidoreductase molybdopterin binding domain

93

246

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
1xdy-assembly7.cif.gz_G structural and biochemical identification of a novel bacterial oxidoreductase, w-containing cofactor 0.8827 96 235
1ogp-assembly3.cif.gz_E the crystal structure of plant sulfite oxidase provides insight into sulfite oxidation in plants and animals 0.8691 96 235
1xdq-assembly3.cif.gz_C structural and biochemical identification of a novel bacterial oxidoreductase 0.8669 96 235
1sox-assembly1.cif.gz_B sulfite oxidase from chicken liver 0.8447 94 234
1sox-assembly1.cif.gz_A sulfite oxidase from chicken liver 0.8412 96 234
ID Description Score Start End Superfamily
1xdyH00 Alpha Beta;Alpha-Beta Complex;Sulfite Oxidase; Chain A, domain 2;Oxidoreductase, molybdopterin-binding domain 0.891 96 235 3.90.420.10
af_I1N786_1_262_3.90.420.10 Alpha Beta;Alpha-Beta Complex;Sulfite Oxidase; Chain A, domain 2;Oxidoreductase, molybdopterin-binding domain 0.8751 97 235 3.90.420.10
af_Q54XJ8_10_262_3.90.420.10 Alpha Beta;Alpha-Beta Complex;Sulfite Oxidase; Chain A, domain 2;Oxidoreductase, molybdopterin-binding domain 0.8623 96 235 3.90.420.10
af_P96400_291_442_3.90.420.10 Alpha Beta;Alpha-Beta Complex;Sulfite Oxidase; Chain A, domain 2;Oxidoreductase, molybdopterin-binding domain 0.8567 95 235 3.90.420.10
af_P11035_116_359_3.90.420.10 Alpha Beta;Alpha-Beta Complex;Sulfite Oxidase; Chain A, domain 2;Oxidoreductase, molybdopterin-binding domain 0.8461 75 235 3.90.420.10
ID Description Score Start End GO Terms
AF-A0A6I4SVQ0-F1-model_v4 Molybdopterin-dependent oxidoreductase 0.975 82 215
AF-A0A2V8MQD5-F1-model_v4 Molybdopterin-binding protein 0.9495 55 258
AF-A0A3S1P9H5-F1-model_v4 Molybdopterin oxidoreductase 0.9481 72 258
AF-A0A2V2U7H9-F1-model_v4 Oxidoreductase molybdopterin-binding domain-containing protein 0.945 55 249 GO:0016491
AF-A0A2V8MQD5-F1-model_v4 Molybdopterin-binding protein 0.9447 55 258

Feature Viewer

pLDDT pTM Quality
80.86 0.76 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map