F325873

General Info

Members Datasets Scaffolds Average Seq Length
214 190 98 716

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2996336353|2996337911
Length 823
Sequence QSSASDIDVDLGRLFGSLVVRWKRILFVALAVTGMALAYAWLATPHYRGETRILIETRESVFTRPQTGSDDRPLLDEEGVTSQVQVITSTDLLKEVARKLDLARLPEFDAAANMSALSRFLVVAGLKSDPNEIPPEERVLKVFREKLNVYRVENSRVIVIEMSAEDPKLAAEIPNALADAYIAVQSAAKLQSNSDATDWLEPEIASLSERVKAAEARVANFRAQSDLLIGQNNSVLATQQLSELSTELSRVRANRGAAEANAASVRAVLQSGASLDSLPEVLSSQLIQRLREREVQLRADIADMSTTLLDNHPRIRAARSQLADLDRQIRAEAENVLKSLGTEANAAKLREQQLVADLNELKAESARAGEEEVELRALEREANAQRELLESYLSRYREASSRRDGNYLPADARIFSRAIVPAEPYYPKPLPIAGAAFIGSLLVMAIVTLLQELFSGRAMRPAAGSRLEAETQDEPLYAEPVVVEEVVHDNPATVEPAVVPEAEAAGISQPAPVEPKPALAEEMELPTVAAPTSPATDILPAPSAIQPVKHEPLPEMKVERESFSEAWARHRSMMDAGRHEAQPVEDNPAEYDEPEDQEVEKEPVMRNPFARRKPAPETSEPVETDMGEVGVESAAEMLIAGGATRAIFVSPEGDEGAAAAVMVAREVADSGLRVLLIDLTASGAASRPMLDSVSFPGVTNLLASEAQFTDAIHTDRYSDCHVMPVGTADPVRAMKAADRLPVIMKSLTTAYDVVVVECGASDAEGIRRLVADGTEIMVSVIEPDGETAAMAAALKARGYGRVMLVSPANHNSPDAPTPGRSAA

Samples

Sample ID Description Type Environment
1 2508501123 Mesorhizobium sp. WSM3626 Isolate Nodule
2 2511231027 Phyllobacterium sp. YR531 Isolate Rhizosphere
3 2513237159 Rhizobium giardinii bv. giardinii H152 Isolate Nodule
4 2513237305 Mesorhizobium amorphae CCNWGS0123 Isolate Nodule
5 2513237351 Mesorhizobium alhagi CCNWXJ12-2 Isolate Nodule
6 2537561587 Agrobacterium tumefaciens Cherry 2E-2-2 Isolate Rhizosphere
7 2554235003 Agrobacterium tumefaciens WRT31 Isolate Rhizosphere
8 2558860242 Agrobacterium fabacearum P4 Isolate Rhizosphere
9 2558860983 Allorhizobium undicola ATCC 700741 Isolate Rhizoplane
10 2582581283 Rhizobium sp. OK665 Isolate Rhizosphere
11 2582581306 Rhizobium sp. YR295 Isolate Rhizosphere
12 2582581865 Rhizobium sp. CF258 Isolate Rhizosphere
13 2582581866 Rhizobium sp. CF097 Isolate Rhizosphere
14 2599185210 Rhizobium sp. NFACC06-2 Isolate Rhizoplane
15 2600255279 Rhizobium sp. NFIX01 Isolate Rhizoplane
16 2600255308 Rhizobium sp. NFIX02 Isolate Rhizoplane
17 2643221550 Mesorhizobium sp. Root552 Isolate Unclassified
18 2643221551 Mesorhizobium sp. Root1471 Isolate Unclassified
19 2643221555 Mesorhizobium sp. Root554 Isolate Unclassified
20 2643221582 Rhizobium sp. Root651 Isolate Unclassified
21 2643221607 Rhizobium sp. Root73 Isolate Unclassified
22 2643221636 Rhizobium sp. Root1204 Isolate Unclassified
23 2643221637 Rhizobium sp. Root1212 Isolate Unclassified
24 2643221686 Rhizobium sp. Root1334 Isolate Unclassified
25 2643221688 Rhizobium sp. Root482 Isolate Unclassified
26 2643221689 Rhizobium sp. Root483D2 Isolate Unclassified
27 2643221693 Rhizobium sp. Root491 Isolate Unclassified
28 2643221718 Rhizobium sp. Root268 Isolate Unclassified
29 2721755686 Mesorhizobium amorphae CCNWGS0123 Isolate Nodule
30 2738543024 Aminobacter sp. AP02 Isolate Unclassified
31 2751185800 Brucella pituitosa AA2 Isolate Unclassified
32 2757320392 Phyllobacterium leguminum ORS 1419 Isolate Nodule
33 2758568016 [Ochrobactrum] quorumnocens A44 Isolate Rhizosphere
34 2765235802 Phyllobacterium bourgognense 31-25a Isolate Rhizoplane
35 2767802442 Phyllobacterium brassicacearum 29-15 Isolate Rhizoplane
36 2775506902 Phyllobacterium zundukense Tri-48 Isolate Unclassified
37 2775506904 Phyllobacterium zundukense Tri-38 Isolate Unclassified
38 2775507049 Rhizobium sp. ACO-34A Isolate Unclassified
39 2808606387 Rhizobium sp. SJZ105 Isolate Rhizosphere
40 2818991439 Agrobacterium tumefaciens 1187 Isolate Unclassified
41 2838675328 Agrobacterium radiobacter SEMIA 410 Isolate Nodule
42 2838714209 Agrobacterium radiobacter SEMIA 435 Isolate Nodule
43 2838719591 Agrobacterium radiobacter SEMIA 436 Isolate Nodule
44 2838724970 Agrobacterium radiobacter SEMIA 437 Isolate Nodule
45 2839993093 Phyllobacterium endophyticum PEPV15 Isolate Unclassified
46 2840764183 Phyllobacterium sophorae CCBAU 03422 Isolate Unclassified
47 2841846520 Agrobacterium radiobacter SEMIA 440 Isolate Nodule
48 2841859092 Agrobacterium radiobacter SEMIA 4026 Isolate Nodule
49 2842124991 Agrobacterium radiobacter SEMIA 434 Isolate Nodule
50 2842130223 Agrobacterium radiobacter SEMIA 441 Isolate Nodule
51 2842152218 Agrobacterium radiobacter SEMIA 457 Isolate Nodule
52 2842170452 Agrobacterium radiobacter SEMIA 461 Isolate Nodule
53 2842175837 Agrobacterium radiobacter SEMIA 462 Isolate Nodule
54 2842187318 Agrobacterium radiobacter SEMIA 464 Isolate Nodule
55 2842211629 Agrobacterium radiobacter SEMIA 472 Isolate Nodule
56 2842224351 Agrobacterium radiobacter SEMIA 480 Isolate Nodule
57 2842515876 Agrobacterium radiobacter SEMIA 4072 Isolate Nodule
58 2842521101 Rhizobium giardinii SEMIA 4084 Isolate Nodule
59 2842871566 Phyllobacterium sp. R-73111 Isolate Unclassified
60 2854911287 Brucella lupini LUP21 Isolate Unclassified
61 2856320880 Mesorhizobium sp. M8A.F.Ca.ET.165.01.1.1 Isolate Nodule
62 2856349417 Mesorhizobium sp. M4A.F.Ca.ET.090.04.2.1 Isolate Nodule
63 2871488783 Mesorhizobium sp. M4B.F.Ca.ET.203.01.1.1 Isolate Nodule
64 2878753008 Mesorhizobium sp. M4B.F.Ca.ET.150.01.1.1 Isolate Nodule
65 2881155292 Mesorhizobium sp. M4B.F.Ca.ET.058.02.1.1 Isolate Nodule
66 2882912400 Mesorhizobium sp. M4B.F.Ca.ET.013.02.1.1 Isolate Nodule
67 2885318864 Mesorhizobium sp. M4B.F.Ca.ET.017.02.2.1 Isolate Nodule
68 2885342637 Mesorhizobium sp. M4A.F.Ca.ET.050.02.1.1 Isolate Nodule
69 2885350715 Mesorhizobium sp. M4A.F.Ca.ET.022.05.2.1 Isolate Nodule
70 2889790730 Chelativorans xinjiangense lm93 Isolate Rhizosphere
71 2889914905 Chelativorans alearense UJN715 Isolate Rhizosphere
72 2894652903 Phyllobacterium sp. SYP-B3895 Isolate Rhizosphere
73 2899792073 Agrobacterium deltaense CNPSo 3391 Isolate Nodule
74 2899803654 Agrobacterium sp. a22-2 Isolate Unclassified
75 2899845264 Agrobacterium fabacearum CNPSo 675 Isolate Unclassified
76 2903492973 Mesorhizobium sp. M00.F.Ca.ET.220.01.1.1 Isolate Nodule
77 2904578770 Phyllobacterium sp. 586 Isolate Unclassified
78 2915650412 Ochrobactrum sp. CM-21-5 Isolate Rhizosphere
79 2919114240 Agrobacterium tumefaciens 1457 Isolate Rhizosphere
80 2919119836 Phyllobacterium sp. 1468 Isolate Rhizosphere
81 2924784321 Mesorhizobium sp. M4B.F.Ca.ET.143.01.1.1 Isolate Nodule
82 2926754445 Agrobacterium radiobacter SLBN-94 Isolate Rhizosphere
83 2926760298 Agrobacterium tumefaciens SLBN-170 Isolate Rhizosphere
84 2928521798 Phyllobacterium ifriqiyense 1451 Isolate Rhizosphere
85 2929138655 Agrobacterium sp. R-72433 Hybrid assembly Isolate Unclassified
86 2933006813 Rhizobium sp. SEMIA 439 Isolate Unclassified
87 2933011516 Rhizobium sp. SEMIA 4032 Isolate Unclassified
88 2933594066 Agrobacterium fabrum 35/80 Isolate Nodule
89 2937843397 Mesorhizobium xinjiangense lm94 Isolate Rhizosphere
90 2954011201 Phyllobacterium ifrigiyense W4I11 Isolate Rhizosphere
91 2961170736 Mesorhizobium sp. M4B.F.Ca.ET.200.01.1.1 Isolate Nodule
92 2967996073 Mesorhizobium sp. M4B.F.Ca.ET.169.01.1.1 Isolate Nodule
93 2968003550 Mesorhizobium sp. M4B.F.Ca.ET.215.01.1.1 Isolate Nodule
94 2970503327 Mesorhizobium sp. M4B.F.Ca.ET.190.01.1.1 Isolate Nodule
95 2977821940 Mesorhizobium sp. M4B.F.Ca.ET.214.01.1.1 Isolate Nodule
96 2979089926 Agrobacterium sp. SORGH_AS 745 Isolate Unclassified
97 2979095461 Agrobacterium tumefaciens SORGH_AS 749 Isolate Unclassified
98 2979100975 Agrobacterium pusense SORGH_AS 755 Isolate Unclassified
99 2979808191 Mesorhizobium sp. M4B.F.Ca.ET.172.01.1.1 Isolate Nodule
100 2984509177 Agrobacterium pusense SORGH_AS260 Isolate Aerial Root
101 2984518228 Agrobacterium pusense SORGH_AS285 Isolate Aerial Root
102 2984537506 Agrobacterium sp. SORGH_AS440 Isolate Aerial Root
103 2984601300 Rhizobium pusense SORGH_AS1083 Isolate Aerial Root
104 2989771324 Rhizobium rhizolycopersici DBTS2 Isolate Rhizosphere
105 2996310559 Mesorhizobium zhangyense CGMCC 1.15528 Isolate Unclassified
106 2996336353 Mesorhizobium sp. YM1C-6-2 Isolate Unclassified
107 2996348954 Mesorhizobium sp. M8A.F.Ca.ET.167.01.1.1 Isolate Nodule
108 3002141150 Phyllobacterium sp. 628 Isolate Unclassified
109 3004275668 Mesorhizobium sp. M8A.F.Ca.ET.208.01.1.1 Isolate Nodule
110 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
111 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
112 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
113 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
114 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
115 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
116 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
117 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
118 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
119 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
120 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
121 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
122 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
123 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
124 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
125 3300022739 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - brown nodules Metagenome Nodule
126 3300022740 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - pink nodules Metagenome Nodule
127 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
128 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
129 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
130 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
131 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
132 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
134 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
135 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
136 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
138 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
139 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
140 3300031967 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - elongated nodules Metagenome Nodule
141 3300033430 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - small nodules Metagenome Nodule
142 3300033464 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - branched nodules Metagenome Nodule
143 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
144 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
145 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
146 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
147 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
148 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
149 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
150 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
151 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
152 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
153 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
154 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
155 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
156 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
157 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
158 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
159 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
160 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
161 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
162 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
163 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
166 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
168 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
171 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
172 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
173 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
174 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
175 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
176 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
178 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
179 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
180 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
181 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
182 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
183 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
184 650716007 Agrobacterium fabacearum H13-3 Isolate Rhizosphere
185 8002285264 Aminobacter anthyllidis LMG 26462 Isolate Nodule
186 8003570095 Agrobacterium rhizogenes GBBC3284 Isolate Unclassified
187 8004374579 Mesorhizobium sp. M4B.F.Ca.ET.211.01.1.1 Isolate Nodule
188 8005658619 Rhizobium terrae CC-HIH110 Isolate Unclassified
189 8018150411 Rhizobium straminoryzae SM12 Isolate Rhizosphere
190 8055431914 Allorhizobium sonneratiae BGMRC 0089 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 45.79
Metatranscriptomes 0
Isolates 54.21

Biome Distribution

Category Percentage (%)
Aerial Root 1.87
Bulb 0
Endosphere 5.61
Nodule 27.1
Rhizoplane 3.27
Rhizosphere 34.11
Stem 0
Stem Tuber 0
Unclassified 28.04

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25165J46597_1000406 3300003214 Bacteria 45616
2 Ga0070663_100033518 3300005455 Bacteria 3549
3 Ga0070665_100011163 3300005548 Bacteria 9080
4 Ga0070665_100081382 3300005548 Bacteria 3244
5 Ga0081539_10001367 3300005985 Bacteria 42276
6 Ga0075365_10018895 3300006038 Bacteria 4245
7 Ga0075369_10015695 3300006186 Bacteria 3044
8 Ga0079104_1002482 3300006946 Bacteria 9857
9 Ga0099826_10016338 3300006948 Bacteria 5602
10 Ga0105239_10106396 3300010375 Bacteria 3107
11 Ga0157373_10008743 3300013100 Bacteria 7504
12 Ga0157371_10000073 3300013102 Bacteria 163215
13 Ga0157370_10002437 3300013104 Bacteria 22431
14 Ga0214544_1000017 3300021320 Bacteria 193638
15 Ga0214542_1000006 3300021321 Bacteria 345164
16 Ga0214543_1000014 3300021327 Bacteria 324986
17 Ga0228711_1000591 3300022739 Bacteria 46284
18 Ga0228710_1000186 3300022740 Bacteria 61784
19 Ga0209026_1000002 3300025250 Bacteria 1136158
20 Ga0209759_1000156 3300025256 Bacteria 117222
21 Ga0209233_1000342 3300025261 Bacteria 45690
22 Ga0209025_1000195 3300025294 Bacteria 148218
23 Ga0209758_1005831 3300025297 Bacteria 9203
24 Ga0207678_10035322 3300026067 Bacteria 4352
25 Ga0209281_1000478 3300027111 Bacteria 55814
26 Ga0209371_1000021 3300027312 Bacteria 555864
27 Ga0209371_1001181 3300027312 Bacteria 19037
28 Ga0209282_1000022 3300027666 Bacteria 173388
29 Ga0209282_1011714 3300027666 Bacteria 5570
30 Ga0268266_10008377 3300028379 Bacteria 9195
31 Ga0268266_10015517 3300028379 Bacteria 6535
32 Ga0307515_10000070 3300028794 Bacteria 239322
33 Ga0307515_10016675 3300028794 Bacteria 13433
34 Ga0268256_1000020 3300030500 Bacteria 557873
35 Ga0268256_1000698 3300030500 Bacteria 25100
36 Ga0307513_10020222 3300031456 Bacteria 7899
37 Ga0315914_1000027 3300031967 Bacteria 106536
38 Ga0315913_1000201 3300033430 Bacteria 43897
39 Ga0315915_1000001 3300033464 Bacteria 481518
40 Ga0395900_0082865 3300037418 Bacteria 3295
41 Ga0395905_0000480 3300037471 Bacteria 55168
42 Ga0395901_0018306 3300038443 Bacteria 7152
43 Ga0395901_0126197 3300038443 Bacteria 2689
44 Ga0439436_0007935 3300041404 Bacteria 3260
45 Ga0439465_0006691 3300041413 Bacteria 3660
46 Ga0439462_0005346 3300042015 Bacteria 3164
47 Ga0466960_0006260 3300044901 Bacteria 4767
48 Ga0495606_0013152 3300046507 Bacteria 6568
49 Ga0495671_0020588 3300046692 Bacteria 3475
50 Ga0495681_0004711 3300047470 Bacteria 9247
51 Ga0496113_0028551 3300048916 Bacteria 4014
52 Ga0496117_0000002 3300048920 Bacteria 2483758
53 Ga0496117_0025146 3300048920 Bacteria 4688
54 Ga0496118_0000245 3300048921 Bacteria 96235
55 Ga0496118_0016188 3300048921 Bacteria 6854
56 Ga0496119_0008849 3300048922 Bacteria 8755
57 Ga0496119_0022110 3300048922 Bacteria 4567
58 Ga0496120_0000794 3300048923 Bacteria 45599
59 Ga0496120_0001486 3300048923 Bacteria 27853
60 Ga0496121_0000001 3300048924 Bacteria 1830318
61 Ga0496122_0000001 3300048925 Bacteria 1827766
62 Ga0496123_0000001 3300048926 Bacteria 1831497
63 Ga0496123_0019618 3300048926 Bacteria 5325
64 Ga0496125_0000001 3300048928 Bacteria 1766138
65 Ga0496125_0000372 3300048928 Bacteria 84272
66 Ga0496125_0024205 3300048928 Bacteria 5587
67 Ga0496126_0030051 3300048929 Bacteria 5155
68 Ga0496126_0031570 3300048929 Bacteria 5001
69 Ga0496126_0061515 3300048929 Bacteria 3372
70 Ga0501031_0000202 3300049568 Bacteria 33947
71 Ga0501032_0000443 3300049569 Bacteria 33947
72 Ga0501033_0000097 3300049570 Bacteria 83228
73 Ga0501033_0001914 3300049570 Bacteria 18115
74 Ga0501033_0018880 3300049570 Bacteria 5212
75 Ga0501034_0000186 3300049571 Bacteria 116500
76 Ga0501034_0036475 3300049571 Bacteria 4981
77 Ga0501036_0000002 3300049572 Bacteria 293106
78 Ga0501037_0000443 3300049573 Bacteria 33927
79 Ga0501038_0000867 3300049574 Bacteria 26767
80 Ga0501038_0006413 3300049574 Bacteria 10894
81 Ga0501039_0000002 3300049575 Bacteria 375152
82 Ga0501043_0000543 3300049579 Bacteria 33914
83 Ga0501046_0011868 3300049580 Bacteria 7434
84 Ga0501047_0002948 3300049581 Bacteria 16125
85 Ga0501068_0016114 3300049584 Bacteria 4304
86 Ga0501070_0024520 3300049586 Bacteria 5058
87 Ga0501070_0033938 3300049586 Bacteria 4269
88 Ga0501035_0000100 3300049822 Bacteria 107321
89 Ga0501035_0012810 3300049822 Bacteria 7744
90 Ga0501044_0000002 3300049823 Bacteria 375152
91 Ga0501044_0011127 3300049823 Bacteria 9757
92 Ga0501044_0026124 3300049823 Bacteria 6183
93 nmdc:mga00v17_18_c1 3300050491 Bacteria 121281
94 nmdc:mga0yw44_17774_c1 3300050492 Bacteria 3879
95 nmdc:mga0sz30_692_c1 3300050516 Bacteria 12425
96 Ga0500559_0014024 3300053136 Bacteria 3387
97 Ga0500561_0000182 3300053137 Bacteria 11496
98 Ga0500568_0000222 3300053139 Bacteria 48804

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 650716007 650739677 551
2 3300053136 Ga0500559_0014024 Ga0500559_0014024_140_2314 583
3 3300048928 Ga0496125_0024205 Ga0496125_0024205_78_2207 590
4 3300006946 Ga0079104_1002482 Ga0079104_10024826 613
5 3300022739 Ga0228711_1000591 Ga0228711_100059110 613
6 3300022740 Ga0228710_1000186 Ga0228710_100018617 613
7 3300027111 Ga0209281_1000478 Ga0209281_10004789 613
8 3300027666 Ga0209282_1000022 Ga0209282_1000022115 613
9 3300031967 Ga0315914_1000027 Ga0315914_100002735 613
10 3300033430 Ga0315913_1000201 Ga0315913_100020132 613
11 3300033464 Ga0315915_1000001 Ga0315915_1000001181 613
12 3300005455 Ga0070663_100033518 Ga0070663_1000335181 616
13 3300026067 Ga0207678_10035322 Ga0207678_100353223 616
14 3300049570 Ga0501033_0001914 Ga0501033_0001914_2083_4335 618
15 3300049574 Ga0501038_0006413 Ga0501038_0006413_6155_8407 618
16 3300049580 Ga0501046_0011868 Ga0501046_0011868_916_3168 618
17 3300049584 Ga0501068_0016114 Ga0501068_0016114_329_2581 618
18 3300049586 Ga0501070_0033938 Ga0501070_0033938_1953_4205 618
19 3300049822 Ga0501035_0012810 Ga0501035_0012810_2083_4335 618
20 3300049823 Ga0501044_0026124 Ga0501044_0026124_2083_4335 618
21 3300049568 Ga0501031_0000202 Ga0501031_0000202_20628_22790 621
22 3300049569 Ga0501032_0000443 Ga0501032_0000443_11158_13320 621
23 3300049570 Ga0501033_0000097 Ga0501033_0000097_20628_22790 621
24 3300049571 Ga0501034_0000186 Ga0501034_0000186_93709_95871 621
25 3300049572 Ga0501036_0000002 Ga0501036_0000002_270319_272481 621
26 3300049573 Ga0501037_0000443 Ga0501037_0000443_20621_22783 621
27 3300049574 Ga0501038_0000867 Ga0501038_0000867_3978_6140 621
28 3300049575 Ga0501039_0000002 Ga0501039_0000002_352363_354525 621
29 3300049579 Ga0501043_0000543 Ga0501043_0000543_11137_13299 621
30 3300049581 Ga0501047_0002948 Ga0501047_0002948_2499_4661 621
31 3300049586 Ga0501070_0024520 Ga0501070_0024520_1315_3477 621
32 3300049822 Ga0501035_0000100 Ga0501035_0000100_84532_86694 621
33 3300049823 Ga0501044_0000002 Ga0501044_0000002_20628_22790 621
34 3300021321 Ga0214542_1000006 Ga0214542_1000006193 625
35 3300021327 Ga0214543_1000014 Ga0214543_1000014130 625
36 3300048928 Ga0496125_0000001 Ga0496125_0000001_1167305_1169542 625
37 3300048929 Ga0496126_0031570 Ga0496126_0031570_792_3029 625
38 3300044901 Ga0466960_0006260 Ga0466960_0006260_2187_4583 626
39 3300048929 Ga0496126_0030051 Ga0496126_0030051_879_3143 626
40 3300010375 Ga0105239_10106396 Ga0105239_101063962 627
41 3300042015 Ga0439462_0005346 Ga0439462_0005346_34_2172 627
42 3300041404 Ga0439436_0007935 Ga0439436_0007935_1102_3240 628
43 3300041413 Ga0439465_0006691 Ga0439465_0006691_421_2559 628
44 3300048922 Ga0496119_0022110 Ga0496119_0022110_2036_4225 628
45 3300006038 Ga0075365_10018895 Ga0075365_100188952 629
46 3300027312 Ga0209371_1000021 Ga0209371_1000021343 630
47 3300030500 Ga0268256_1000020 Ga0268256_1000020349 630
48 3300048920 Ga0496117_0025146 Ga0496117_0025146_722_2959 630
49 3300048924 Ga0496121_0000001 Ga0496121_0000001_1006747_1008984 630
50 3300053137 Ga0500561_0000182 Ga0500561_0000182_1769_4033 631
51 3300021320 Ga0214544_1000017 Ga0214544_100001737 634
52 3300027312 Ga0209371_1001181 Ga0209371_10011814 634
53 3300030500 Ga0268256_1000698 Ga0268256_10006984 634
54 3300037471 Ga0395905_0000480 Ga0395905_0000480_44615_46846 634
55 iso_pu_bacteria 2929138655 2929139638 635
56 3300048926 Ga0496123_0019618 Ga0496123_0019618_539_2767 636
57 iso_pu_bacteria 2889914905 2889915812 636
58 3300006948 Ga0099826_10016338 Ga0099826_100163382 638
59 3300027666 Ga0209282_1011714 Ga0209282_10117142 638
60 3300048921 Ga0496118_0016188 Ga0496118_0016188_3774_6035 638
61 3300025294 Ga0209025_1000195 Ga0209025_100019589 639
62 3300013102 Ga0157371_10000073 Ga0157371_10000073142 641
63 3300049571 Ga0501034_0036475 Ga0501034_0036475_2209_4389 641
64 3300013100 Ga0157373_10008743 Ga0157373_100087433 644
65 3300048928 Ga0496125_0000372 Ga0496125_0000372_21171_23423 644
66 3300049570 Ga0501033_0018880 Ga0501033_0018880_620_2860 644
67 3300049823 Ga0501044_0011127 Ga0501044_0011127_1530_3770 644
68 iso_pu_bacteria 2894652903 2894654728 644
69 3300028379 Ga0268266_10015517 Ga0268266_100155175 645
70 3300048916 Ga0496113_0028551 Ga0496113_0028551_1651_3915 645
71 3300048920 Ga0496117_0000002 Ga0496117_0000002_1348493_1350757 645
72 3300048921 Ga0496118_0000245 Ga0496118_0000245_15561_17825 645
73 3300048923 Ga0496120_0000794 Ga0496120_0000794_14840_17104 645
74 3300048925 Ga0496122_0000001 Ga0496122_0000001_665605_667869 645
75 3300048926 Ga0496123_0000001 Ga0496123_0000001_669336_671600 645
76 3300048929 Ga0496126_0061515 Ga0496126_0061515_771_3035 645
77 iso_pu_bacteria 2582581866 2585392911 645
78 iso_pu_bacteria 2643221637 2644206097 645
79 iso_pu_bacteria 2643221718 2644649744 645
80 iso_pu_bacteria 2513237159 2514001083 648
81 iso_pu_bacteria 2842521101 2842526227 648
82 iso_pu_bacteria 2889790730 2889793961 648
83 iso_pu_bacteria 8005658619 8005659876 648
84 3300005548 Ga0070665_100011163 Ga0070665_1000111638 649
85 3300028379 Ga0268266_10008377 Ga0268266_100083777 649
86 3300028794 Ga0307515_10016675 Ga0307515_100166752 649
87 3300050491 nmdc:mga00v17_18_c1 nmdc:mga00v17_18_c1_72003_74267 649
88 3300050492 nmdc:mga0yw44_17774_c1 nmdc:mga0yw44_17774_c1_771_3035 649
89 3300050516 nmdc:mga0sz30_692_c1 nmdc:mga0sz30_692_c1_8037_10301 649
90 iso_pu_bacteria 2558860983 2561466150 650
91 3300028794 Ga0307515_10000070 Ga0307515_1000007075 651
92 3300031456 Ga0307513_10020222 Ga0307513_100202224 651
93 3300046692 Ga0495671_0020588 Ga0495671_0020588_925_3189 651
94 3300047470 Ga0495681_0004711 Ga0495681_0004711_2503_4767 651
95 iso_pu_bacteria 2582581283 2585165675 651
96 iso_pu_bacteria 2643221607 2644048303 651
97 iso_pu_bacteria 2643221636 2644200800 651
98 iso_pu_bacteria 2643221686 2644485280 651
99 iso_pu_bacteria 2582581865 2585391344 652
100 iso_pu_bacteria 2643221689 2644502291 653
101 iso_pu_bacteria 2904578770 2904581520 653
102 iso_pu_bacteria 2919119836 2919122754 653
103 iso_pu_bacteria 2928521798 2928524472 653
104 3300005985 Ga0081539_10001367 Ga0081539_1000136713 654
105 3300053139 Ga0500568_0000222 Ga0500568_0000222_4159_6255 654
106 iso_pu_bacteria 2537561587 2537874828 654
107 iso_pu_bacteria 2554235003 2554247345 654
108 iso_pu_bacteria 2558860242 2559294476 654
109 iso_pu_bacteria 2599185210 2599602405 654
110 iso_pu_bacteria 2600255279 2601608542 654
111 iso_pu_bacteria 2600255308 2601745316 654
112 iso_pu_bacteria 2643221693 2644518539 654
113 iso_pu_bacteria 2765235802 2765465356 654
114 iso_pu_bacteria 2767802442 2770197788 654
115 iso_pu_bacteria 2775506902 2776271824 654
116 iso_pu_bacteria 2775506904 2776279661 654
117 iso_pu_bacteria 2775507049 2776912931 654
118 iso_pu_bacteria 2808606387 2808985748 654
119 iso_pu_bacteria 2818991439 2819555870 654
120 iso_pu_bacteria 2838675328 2838676592 654
121 iso_pu_bacteria 2838714209 2838715476 654
122 iso_pu_bacteria 2838719591 2838720724 654
123 iso_pu_bacteria 2838724970 2838726232 654
124 iso_pu_bacteria 2841846520 2841847655 654
125 iso_pu_bacteria 2842124991 2842126315 654
126 iso_pu_bacteria 2842130223 2842131485 654
127 iso_pu_bacteria 2842152218 2842153346 654
128 iso_pu_bacteria 2842170452 2842171719 654
129 iso_pu_bacteria 2842175837 2842176965 654
130 iso_pu_bacteria 2842187318 2842188584 654
131 iso_pu_bacteria 2842211629 2842212895 654
132 iso_pu_bacteria 2842224351 2842225486 654
133 iso_pu_bacteria 2854911287 2854914630 654
134 iso_pu_bacteria 2899792073 2899796853 654
135 iso_pu_bacteria 2899845264 2899847103 654
136 iso_pu_bacteria 2919114240 2919115568 654
137 iso_pu_bacteria 2926754445 2926756619 654
138 iso_pu_bacteria 2926760298 2926760855 654
139 iso_pu_bacteria 2933006813 2933007989 654
140 iso_pu_bacteria 2933594066 2933595261 654
141 iso_pu_bacteria 2954011201 2954015248 654
142 iso_pu_bacteria 2979089926 2979093868 654
143 iso_pu_bacteria 2979095461 2979098749 654
144 iso_pu_bacteria 2979100975 2979105896 654
145 iso_pu_bacteria 2984509177 2984512315 654
146 iso_pu_bacteria 2984518228 2984521323 654
147 iso_pu_bacteria 2984537506 2984540618 654
148 iso_pu_bacteria 2984601300 2984602884 654
149 iso_pu_bacteria 2582581306 2585269365 655
150 iso_pu_bacteria 2643221582 2643918976 655
151 iso_pu_bacteria 2841859092 2841859805 655
152 iso_pu_bacteria 2842515876 2842516590 655
153 iso_pu_bacteria 2899803654 2899803888 655
154 iso_pu_bacteria 2933011516 2933012770 655
155 iso_pu_bacteria 2643221688 2644493293 656
156 iso_pu_bacteria 8018150411 8018152449 656
157 3300013104 Ga0157370_10002437 Ga0157370_1000243718 657
158 3300025250 Ga0209026_1000002 Ga0209026_1000002808 657
159 3300025256 Ga0209759_1000156 Ga0209759_100015619 657
160 iso_pu_bacteria 2840764183 2840769837 657
161 iso_pu_bacteria 2937843397 2937845549 657
162 iso_pu_bacteria 8003570095 8003570726 657
163 iso_pu_bacteria 2751185800 2753359090 658
164 iso_pu_bacteria 2839993093 2839995754 658
165 iso_pu_bacteria 2989771324 2989772228 659
166 3300046507 Ga0495606_0013152 Ga0495606_0013152_2960_5146 660
167 iso_pu_bacteria 2758568016 2758641331 660
168 iso_pu_bacteria 3002141150 3002143502 660
169 iso_pu_bacteria 2915650412 2915651601 662
170 iso_pu_bacteria 2511231027 2511388265 663
171 iso_pu_bacteria 2842871566 2842874372 663
172 iso_pu_bacteria 2513237351 2514589757 664
173 iso_pu_bacteria 2643221550 2643772066 664
174 iso_pu_bacteria 8055431914 8055434290 664
175 iso_pu_bacteria 2757320392 2757571664 665
176 iso_pu_bacteria 2738543024 2739308804 668
177 iso_pu_bacteria 2996310559 2996311279 669
178 iso_pu_bacteria 8002285264 8002285329 669
179 3300048922 Ga0496119_0008849 Ga0496119_0008849_3738_5999 671
180 3300048923 Ga0496120_0001486 Ga0496120_0001486_13567_15828 671
181 3300005548 Ga0070665_100081382 Ga0070665_1000813822 672
182 3300038443 Ga0395901_0126197 Ga0395901_0126197_377_2635 672
183 iso_pu_bacteria 2508501123 2509115327 673
184 iso_pu_bacteria 2856320880 2856324719 673
185 iso_pu_bacteria 2996348954 2996351556 673
186 iso_pu_bacteria 3004275668 3004278256 673
187 3300006186 Ga0075369_10015695 Ga0075369_100156951 674
188 iso_pu_bacteria 2856349417 2856352207 674
189 iso_pu_bacteria 2871488783 2871488949 674
190 iso_pu_bacteria 2878753008 2878753711 674
191 iso_pu_bacteria 2881155292 2881156543 674
192 iso_pu_bacteria 2882912400 2882919631 674
193 iso_pu_bacteria 2885318864 2885324179 674
194 iso_pu_bacteria 2885342637 2885348522 674
195 iso_pu_bacteria 2885350715 2885353123 674
196 iso_pu_bacteria 2903492973 2903495608 674
197 iso_pu_bacteria 2924784321 2924789937 674
198 iso_pu_bacteria 2961170736 2961170899 674
199 iso_pu_bacteria 2967996073 2968003478 674
200 iso_pu_bacteria 2968003550 2968004245 674
201 iso_pu_bacteria 2970503327 2970503489 674
202 iso_pu_bacteria 2977821940 2977822926 674
203 iso_pu_bacteria 2979808191 2979815718 674
204 iso_pu_bacteria 8004374579 8004375282 674
205 iso_pu_bacteria 2513237305 2514418769 675
206 iso_pu_bacteria 2721755686 2723576580 675
207 iso_pu_bacteria 2643221551 2643775257 678
208 iso_pu_bacteria 2643221555 2643793703 678
209 3300025297 Ga0209758_1005831 Ga0209758_10058316 683
210 iso_pu_bacteria 2996336353 2996337911 690
211 3300037418 Ga0395900_0082865 Ga0395900_0082865_781_3021 694
212 3300038443 Ga0395901_0018306 Ga0395901_0018306_1622_3862 694
213 3300003214 JGI25165J46597_1000406 JGI25165J46597_100040617 695
214 3300025261 Ga0209233_1000342 Ga0209233_100034217 695

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02706

Wzz

Chain length determinant protein

7

100

0.86

Feature Viewer

pLDDT pTM Quality
67.85 0.34 Low
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Predicted Structure (AlphaFold2)

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