F325726

General Info

Members Datasets Scaffolds Average Seq Length
214 155 214 741

Family's Representative Sequence

Representative Sequence 3300049585|Ga0501069_0005728|Ga0501069_0005728_1427_3859
Length 810
Sequence MELEVVPAEDHSEKPARHRNEPFSREALARELNESQLEAVVHPAAPLLVVAGAGSGKTRVITYRLARLVATGADPKRILAVTFTNKAAGELRERVRDLLREKIGVGLAGLSVGTFHSISARLLRQYGEAIGLKKDFVIYDTDDQKRLMARILTDLKVPERMFPVRQVMSAIDRLENQGIMAAGFQPGDYFDDVVAKAYTLYEERMAAANATDFGGLLLHTLRLCVSDGPAAHLLAERFDHVLVDEFQDTNSVQYKLVRCLSRRTKSITVVGDEDQSIYKWRGADIRNILDFERDHPGAGVVKLERNYRSTGNILHAANAIISKNQERRPKHLYTEEGDGDRIVLFEGETERDEADFVAQQIERGFSEGLSPRDVAVFYRTNAQSRVLEDAMRARDIPYAVVGGTRFFDRTEIKDLVCYLRAIGNPEDGLALQRIINVPARGIGAATVDRIGALIYERRISAWDALTLASAAPAGQQSEDDDGQDSLFEPVERTELDEPVLGPGPRKKVAAFVALMEKLRRESVGLPPADLAEKVLEESGYRDALAAEATLEAEGRGENLMEFVAQMREYEREAEEPTLHGFLERIALQSDADGYDEEKGAVSLMTVHTAKGLEFPWVFLTGLEERIFPHARSVDDDSAVEEERRLCYVAVTRARKRLFLSRVRRRRLSGQELPGIPSRFLRELPMTNVDAIVMERPTYYREQTSGRGPWGGGWSKPEPEAEPSFQLRGPSSFAAPKPKLTAKPTGEISVHYDADDGDHGPGLQVGAKLRHPSFGVGEIRGWQGSGADLKVTMRFQGAGVKTILARFLTKP

Samples

Sample ID Description Type Environment
1 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
2 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
3 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
4 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
5 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
6 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
7 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
8 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
9 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
10 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
11 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
12 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
13 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
14 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
15 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
16 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
17 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
18 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
19 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
20 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
21 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
22 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
23 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
24 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
25 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
26 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
27 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
29 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009979 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG Metagenome Rhizosphere
32 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
33 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
34 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
35 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
36 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
37 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
52 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
53 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
55 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
56 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
57 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
58 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
59 3300030734 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 5 Metagenome Rhizosphere
60 3300030736 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 6 Metagenome Rhizosphere
61 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
62 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
63 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
64 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
65 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
66 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
67 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
68 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
69 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
70 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
71 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
72 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
73 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
74 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
75 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
76 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
77 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
78 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
79 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
80 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
81 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
82 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
83 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
84 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
85 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
86 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
87 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
88 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
89 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
90 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
91 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
92 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
93 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
94 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
95 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
96 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
97 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
98 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
99 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
100 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
101 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
102 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
103 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
104 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
105 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
106 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
107 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
108 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
109 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
110 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
111 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
112 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
113 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
114 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
115 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
123 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
124 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
125 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
126 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
127 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
128 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
129 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
130 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
131 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
132 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
133 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
134 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
135 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
136 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
137 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
138 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
139 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
140 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
141 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
142 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
143 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
144 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
145 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
146 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
147 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
148 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
149 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
150 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
151 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
152 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
153 3300053738 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 endosphere Metagenome Endosphere
154 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
155 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.49
Nodule 0
Rhizoplane 3.27
Rhizosphere 81.31
Stem 0
Stem Tuber 0
Unclassified 0.93

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070689_100018792 3300005340 Bacteria 5100
2 Ga0070668_100038333 3300005347 Bacteria 3662
3 Ga0070669_100002226 3300005353 Bacteria 14033
4 Ga0070674_100020795 3300005356 Bacteria 4202
5 Ga0070706_100083443 3300005467 Bacteria 2960
6 Ga0070679_100018489 3300005530 Bacteria 6764
7 Ga0070684_100006288 3300005535 Bacteria 9174
8 Ga0070686_100026814 3300005544 Bacteria 3481
9 Ga0070695_100000318 3300005545 Bacteria 24702
10 Ga0068855_100007613 3300005563 Bacteria 13101
11 Ga0068855_100011188 3300005563 Bacteria 10835
12 Ga0068854_100059222 3300005578 Bacteria 2767
13 Ga0068856_100021180 3300005614 Bacteria 6314
14 Ga0068859_100020644 3300005617 Bacteria 6611
15 Ga0068862_100031213 3300005844 Bacteria 4495
16 Ga0081455_10000001 3300005937 Bacteria 603871
17 Ga0075365_10000008 3300006038 Bacteria 114620
18 Ga0075365_10000041 3300006038 Bacteria 43185
19 Ga0075363_100016470 3300006048 Bacteria 3651
20 Ga0075364_10009874 3300006051 Bacteria 5743
21 Ga0075362_10000407 3300006177 Bacteria 12374
22 Ga0075367_10004797 3300006178 Bacteria 6652
23 Ga0075369_10006149 3300006186 Bacteria 4528
24 Ga0075366_10015516 3300006195 Bacteria 4369
25 Ga0075428_100000914 3300006844 Bacteria 31207
26 Ga0075428_100002220 3300006844 Bacteria 21042
27 Ga0075428_100014653 3300006844 Bacteria 8707
28 Ga0075433_10003843 3300006852 Bacteria 11627
29 Ga0075434_100002202 3300006871 Bacteria 16988
30 Ga0075434_100009122 3300006871 Bacteria 9243
31 Ga0068865_100066458 3300006881 Bacteria 2544
32 Ga0097620_100020644 3300006931 Bacteria 6611
33 Ga0075435_100006037 3300007076 Bacteria 8528
34 Ga0075435_100006245 3300007076 Bacteria 8414
35 Ga0105240_10158039 3300009093 Bacteria 2695
36 Ga0114129_10002057 3300009147 Bacteria 27628
37 Ga0105032_100001 3300009979 Bacteria 472394
38 Ga0105032_100025 3300009979 Bacteria 33986
39 Ga0105239_10082046 3300010375 Bacteria 3550
40 Ga0157369_10000003 3300013105 Bacteria 507337
41 Ga0157369_10003043 3300013105 Bacteria 20014
42 Ga0157369_10006246 3300013105 Bacteria 13824
43 Ga0157369_10038891 3300013105 Bacteria 5200
44 Ga0163162_10049322 3300013306 Bacteria 4219
45 Ga0157372_10000160 3300013307 Bacteria 73603
46 Ga0157372_10022887 3300013307 Bacteria 6767
47 Ga0157380_10028248 3300014326 Bacteria 4274
48 Ga0207682_10002820 3300025893 Bacteria 7679
49 Ga0207645_10004120 3300025907 Bacteria 10810
50 Ga0207645_10010062 3300025907 Bacteria 6512
51 Ga0207643_10008320 3300025908 Bacteria 5567
52 Ga0207652_10064337 3300025921 Bacteria 3174
53 Ga0207706_10052876 3300025933 Bacteria 3586
54 Ga0207669_10001193 3300025937 Bacteria 11042
55 Ga0207704_10016276 3300025938 Bacteria 3818
56 Ga0207691_10001142 3300025940 Bacteria 26346
57 Ga0207667_10031570 3300025949 Bacteria 5716
58 Ga0207640_10004031 3300025981 Bacteria 7934
59 Ga0207702_10014634 3300026078 Bacteria 6512
60 Ga0207675_100019538 3300026118 Bacteria 6324
61 Ga0207675_100026120 3300026118 Bacteria 5436
62 Ga0207683_10023220 3300026121 Bacteria 5331
63 Ga0207698_10065213 3300026142 Bacteria 2859
64 Ga0209813_10000251 3300027866 Bacteria 15589
65 Ga0207428_10035124 3300027907 Bacteria 4100
66 Ga0268265_10026739 3300028380 Bacteria 4108
67 Ga0265334_10011786 3300028573 Bacteria 3674
68 Ga0265318_10000130 3300028577 Bacteria 69319
69 Ga0265323_10001110 3300028653 Bacteria 13905
70 Ga0265336_10007250 3300028666 Bacteria 3949
71 Ga0265338_10001775 3300028800 Bacteria 34030
72 Ga0265338_10019072 3300028800 Bacteria 7300
73 Ga0265338_10026066 3300028800 Bacteria 5910
74 Ga0316179_1078429 3300030734 Bacteria 15213
75 Ga0316180_1159006 3300030736 Bacteria 9125
76 Ga0316183_1005382 3300030742 Bacteria 21667
77 Ga0316183_1077166 3300030742 Bacteria 7218
78 Ga0316181_1020431 3300030744 Bacteria 46502
79 Ga0316182_1003092 3300030745 Bacteria 41807
80 Ga0316182_1214308 3300030745 Bacteria 13254
81 Ga0265330_10000906 3300031235 Bacteria 18293
82 Ga0265330_10001047 3300031235 Bacteria 16721
83 Ga0265330_10002937 3300031235 Bacteria 9086
84 Ga0265330_10003543 3300031235 Bacteria 8132
85 Ga0265332_10000348 3300031238 Bacteria 34701
86 Ga0265328_10002477 3300031239 Bacteria 8279
87 Ga0265328_10009803 3300031239 Bacteria 3882
88 Ga0265320_10001920 3300031240 Bacteria 14670
89 Ga0265320_10002441 3300031240 Bacteria 12946
90 Ga0265320_10002745 3300031240 Bacteria 12167
91 Ga0265329_10000136 3300031242 Bacteria 35210
92 Ga0265329_10001047 3300031242 Bacteria 13713
93 Ga0265340_10021886 3300031247 Bacteria 3274
94 Ga0265339_10001081 3300031249 Bacteria 20676
95 Ga0265339_10001964 3300031249 Bacteria 15102
96 Ga0265339_10008044 3300031249 Bacteria 6743
97 Ga0265331_10002108 3300031250 Bacteria 13711
98 Ga0265316_10000044 3300031344 Bacteria 130544
99 Ga0265316_10000198 3300031344 Bacteria 69877
100 Ga0265316_10002981 3300031344 Bacteria 17311
101 Ga0265316_10011114 3300031344 Bacteria 8151
102 Ga0265316_10021776 3300031344 Bacteria 5420
103 Ga0265316_10033726 3300031344 Bacteria 4166
104 Ga0265313_10012121 3300031595 Bacteria 5304
105 Ga0265314_10002112 3300031711 Bacteria 20884
106 Ga0265314_10008104 3300031711 Bacteria 9043
107 Ga0265314_10010243 3300031711 Bacteria 7841
108 Ga0265342_10000676 3300031712 Bacteria 35607
109 Ga0265342_10001991 3300031712 Bacteria 18224
110 Ga0265342_10007693 3300031712 Bacteria 7847
111 Ga0265342_10018873 3300031712 Bacteria 4458
112 Ga0316576_10002439 3300031727 Bacteria 10576
113 Ga0316576_10002658 3300031727 Bacteria 10212
114 Ga0316576_10007040 3300031727 Bacteria 7041
115 Ga0307516_10011743 3300031730 Bacteria 9503
116 Ga0373950_0000009 3300034818 Bacteria 379994
117 Ga0373950_0000027 3300034818 Bacteria 172704
118 Ga0373954_0001889 3300035118 Bacteria 8655
119 Ga0373957_0008152 3300035120 Bacteria 3382
120 Ga0373955_0025446 3300035172 Bacteria 3039
121 Ga0316574_0000210 3300035398 Bacteria 20554
122 Ga0373933_0000220 3300035724 Bacteria 37921
123 Ga0373937_0011301 3300036401 Bacteria 7831
124 Ga0373937_0013046 3300036401 Bacteria 7319
125 Ga0395899_0037188 3300037312 Bacteria 3650
126 Ga0439438_003461 3300041405 Bacteria 6377
127 Ga0439461_0000165 3300041410 Bacteria 8980
128 Ga0439461_0000308 3300041410 Bacteria 6878
129 Ga0439466_0002776 3300041411 Bacteria 6854
130 Ga0439432_016184 3300042006 Bacteria 2512
131 Ga0439432_023010 3300042006 Bacteria 2055
132 Ga0450906_002785 3300042145 Bacteria 3810
133 Ga0439446_0000003 3300042156 Bacteria 158513
134 Ga0439446_0000236 3300042156 Bacteria 10208
135 Ga0466965_0000133 3300044683 Bacteria 21106
136 Ga0453684_0000034 3300044712 Bacteria 728457
137 Ga0453684_0002628 3300044712 Bacteria 42925
138 Ga0451576_0004999 3300045051 Bacteria 16859
139 Ga0495629_0000112 3300046459 Bacteria 72938
140 Ga0495580_0000508 3300046472 Bacteria 32740
141 Ga0495582_0003570 3300046473 Bacteria 8770
142 Ga0495639_0011342 3300046475 Bacteria 3842
143 Ga0495664_0001853 3300046477 Bacteria 11246
144 Ga0495635_0003928 3300046663 Bacteria 10337
145 Ga0495647_0016146 3300046681 Bacteria 2626
146 Ga0495658_0000082 3300046683 Bacteria 47833
147 Ga0495613_0002671 3300046689 Bacteria 13381
148 Ga0495660_0000005 3300046810 Bacteria 574567
149 Ga0495581_0003360 3300047315 Bacteria 9184
150 Ga0495674_0001310 3300047319 Bacteria 24214
151 Ga0495680_0000382 3300047322 Bacteria 49578
152 Ga0495614_0001525 3300048089 Bacteria 10050
153 Ga0496104_0066594 3300048907 Bacteria 3420
154 Ga0496108_0096277 3300048911 Bacteria 2521
155 Ga0496109_0039013 3300048912 Bacteria 4298
156 Ga0496114_0003725 3300048917 Bacteria 11742
157 Ga0496114_0005243 3300048917 Bacteria 10131
158 Ga0496114_0008472 3300048917 Bacteria 8147
159 Ga0496115_0034528 3300048918 Bacteria 3997
160 Ga0496124_0013469 3300048927 Bacteria 7983
161 Ga0501034_0000028 3300049571 Bacteria 255803
162 Ga0501034_0000509 3300049571 Bacteria 62601
163 Ga0501034_0072810 3300049571 Bacteria 3445
164 Ga0501037_0000001 3300049573 Bacteria 753276
165 Ga0501038_0012245 3300049574 Bacteria 7833
166 Ga0501043_0000356 3300049579 Bacteria 41586
167 Ga0501046_0002076 3300049580 Bacteria 19012
168 Ga0501047_0000001 3300049581 Bacteria 658799
169 Ga0501048_0001931 3300049582 Bacteria 15752
170 Ga0501067_0001706 3300049583 Bacteria 12090
171 Ga0501069_0005728 3300049585 Bacteria 6477
172 Ga0501070_0000078 3300049586 Bacteria 82971
173 Ga0501072_0000019 3300049588 Bacteria 158156
174 Ga0501073_0001678 3300049589 Bacteria 16413
175 Ga0501073_0003317 3300049589 Bacteria 12102
176 Ga0501073_0007574 3300049589 Bacteria 8067
177 Ga0501073_0021518 3300049589 Bacteria 4649
178 Ga0501074_0006103 3300049590 Bacteria 8700
179 Ga0501079_0000013 3300049741 Bacteria 68061
180 Ga0501080_0011187 3300049742 Bacteria 8212
181 Ga0501080_0022031 3300049742 Bacteria 5902
182 Ga0501083_0008798 3300049744 Bacteria 7128
183 Ga0501083_0016960 3300049744 Bacteria 5086
184 nmdc:mga00v17_361_c1 3300050491 Bacteria 25741
185 nmdc:mga0yw44_17_c1 3300050492 Bacteria 74504
186 nmdc:mga0yw44_1_c1 3300050492 Bacteria 702221
187 nmdc:mga0yw44_47525_c1 3300050492 Bacteria 2584
188 nmdc:mga0yw44_4_c1 3300050492 Bacteria 450247
189 nmdc:mga0k408_3322_c1 3300050493 Bacteria 3862
190 nmdc:mga06z11_196_c1 3300050494 Bacteria 24317
191 nmdc:mga04h51_1273_c1 3300050495 Bacteria 5825
192 nmdc:mga07m45_6252_c2 3300050496 Bacteria 4041
193 nmdc:mga05p37_1278_c1 3300050507 Bacteria 29256
194 nmdc:mga0n895_2581_c1 3300050512 Bacteria 14222
195 nmdc:mga0n895_7428_c1 3300050512 Bacteria 9403
196 nmdc:mga0rr50_20283_c1 3300050513 Bacteria 4509
197 nmdc:mga0rr50_430_c1 3300050513 Bacteria 22587
198 nmdc:mga0a205_591_c1 3300050515 Bacteria 28744
199 Ga0495619_0002162 3300053085 Bacteria 13020
200 Ga0500646_0000075 3300053090 Bacteria 28149
201 Ga0500583_0000347 3300053092 Bacteria 15434
202 Ga0500583_0002751 3300053092 Bacteria 5368
203 Ga0500651_0000001 3300053093 Bacteria 529808
204 Ga0500641_0000001 3300053096 Bacteria 1115973
205 Ga0500555_000009 3300053103 Bacteria 263998
206 Ga0500569_000014 3300053109 Bacteria 50618
207 Ga0500594_0000074 3300053118 Bacteria 31465
208 Ga0500652_000001 3300053131 Bacteria 946868
209 Ga0500588_0000029 3300053146 Bacteria 32025
210 Ga0500603_000002 3300053150 Bacteria 154040
211 Ga0500616_0000012 3300053153 Bacteria 681798
212 Ga0500613_000043 3300053738 Bacteria 5986
213 Ga0501084_0000046 3300054114 Bacteria 96044
214 Ga0501082_0000392 3300060353 Bacteria 38817

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300042006 Ga0439432_023010 Ga0439432_023010_12_2000 637
2 3300053150 Ga0500603_000002 Ga0500603_000002_85319_87505 638
3 3300006871 Ga0075434_100009122 Ga0075434_10000912210 646
4 3300007076 Ga0075435_100006245 Ga0075435_1000062459 646
5 3300050512 nmdc:mga0n895_7428_c1 nmdc:mga0n895_7428_c1_6760_8766 646
6 3300050513 nmdc:mga0rr50_430_c1 nmdc:mga0rr50_430_c1_8132_10138 646
7 3300046681 Ga0495647_0016146 Ga0495647_0016146_388_2409 654
8 3300005544 Ga0070686_100026814 Ga0070686_1000268142 664
9 3300005617 Ga0068859_100020644 Ga0068859_1000206444 664
10 3300006931 Ga0097620_100020644 Ga0097620_1000206444 664
11 3300013105 Ga0157369_10006246 Ga0157369_100062465 664
12 3300049571 Ga0501034_0000028 Ga0501034_0000028_100210_102318 664
13 3300049573 Ga0501037_0000001 Ga0501037_0000001_95448_97556 664
14 3300049574 Ga0501038_0012245 Ga0501038_0012245_4825_6933 664
15 3300013307 Ga0157372_10000160 Ga0157372_100001602 666
16 3300013306 Ga0163162_10049322 Ga0163162_100493224 667
17 3300014326 Ga0157380_10028248 Ga0157380_100282482 667
18 3300025893 Ga0207682_10002820 Ga0207682_100028202 667
19 3300025908 Ga0207643_10008320 Ga0207643_100083203 667
20 3300025940 Ga0207691_10001142 Ga0207691_100011422 667
21 3300026118 Ga0207675_100026120 Ga0207675_1000261202 667
22 3300026121 Ga0207683_10023220 Ga0207683_100232203 667
23 3300013105 Ga0157369_10003043 Ga0157369_1000304321 668
24 3300044683 Ga0466965_0000133 Ga0466965_0000133_1235_3349 668
25 3300053153 Ga0500616_0000012 Ga0500616_0000012_281679_283799 668
26 3300041405 Ga0439438_003461 Ga0439438_003461_3694_5808 670
27 3300041410 Ga0439461_0000165 Ga0439461_0000165_5740_7857 670
28 3300041410 Ga0439461_0000308 Ga0439461_0000308_4410_6524 670
29 3300041411 Ga0439466_0002776 Ga0439466_0002776_3266_5380 670
30 3300042156 Ga0439446_0000236 Ga0439446_0000236_5486_7600 670
31 3300005578 Ga0068854_100059222 Ga0068854_1000592222 671
32 3300006038 Ga0075365_10000008 Ga0075365_1000000857 671
33 3300006195 Ga0075366_10015516 Ga0075366_100155163 671
34 3300006844 Ga0075428_100002220 Ga0075428_10000222016 671
35 3300009979 Ga0105032_100025 Ga0105032_10002535 671
36 3300013105 Ga0157369_10000003 Ga0157369_10000003434 671
37 3300013105 Ga0157369_10038891 Ga0157369_100388912 671
38 3300013307 Ga0157372_10022887 Ga0157372_100228874 671
39 3300025949 Ga0207667_10031570 Ga0207667_100315702 671
40 3300025981 Ga0207640_10004031 Ga0207640_100040312 671
41 3300030734 Ga0316179_1078429 Ga0316179_107842915 671
42 3300030736 Ga0316180_1159006 Ga0316180_11590067 671
43 3300030742 Ga0316183_1005382 Ga0316183_100538216 671
44 3300030742 Ga0316183_1077166 Ga0316183_10771664 671
45 3300030744 Ga0316181_1020431 Ga0316181_102043142 671
46 3300030745 Ga0316182_1003092 Ga0316182_100309231 671
47 3300030745 Ga0316182_1214308 Ga0316182_12143082 671
48 3300031730 Ga0307516_10011743 Ga0307516_100117436 671
49 3300042006 Ga0439432_016184 Ga0439432_016184_201_2312 671
50 3300042145 Ga0450906_002785 Ga0450906_002785_215_2332 671
51 3300042156 Ga0439446_0000003 Ga0439446_0000003_71728_73842 671
52 3300046810 Ga0495660_0000005 Ga0495660_0000005_245396_247513 671
53 3300050492 nmdc:mga0yw44_1_c1 nmdc:mga0yw44_1_c1_60794_62905 671
54 3300050492 nmdc:mga0yw44_47525_c1 nmdc:mga0yw44_47525_c1_113_2230 671
55 3300050493 nmdc:mga0k408_3322_c1 nmdc:mga0k408_3322_c1_854_2971 671
56 3300050496 nmdc:mga07m45_6252_c2 nmdc:mga07m45_6252_c2_1912_4029 671
57 3300053103 Ga0500555_000009 Ga0500555_000009_140324_142438 671
58 3300053109 Ga0500569_000014 Ga0500569_000014_22028_24145 671
59 3300053146 Ga0500588_0000029 Ga0500588_0000029_8728_10845 671
60 3300005937 Ga0081455_10000001 Ga0081455_10000001418 672
61 3300006038 Ga0075365_10000041 Ga0075365_1000004117 672
62 3300006048 Ga0075363_100016470 Ga0075363_1000164702 672
63 3300006051 Ga0075364_10009874 Ga0075364_100098744 672
64 3300006178 Ga0075367_10004797 Ga0075367_100047974 672
65 3300006186 Ga0075369_10006149 Ga0075369_100061493 672
66 3300027866 Ga0209813_10000251 Ga0209813_100002517 672
67 3300050491 nmdc:mga00v17_361_c1 nmdc:mga00v17_361_c1_429_2546 672
68 3300050492 nmdc:mga0yw44_17_c1 nmdc:mga0yw44_17_c1_27751_29865 672
69 3300050492 nmdc:mga0yw44_4_c1 nmdc:mga0yw44_4_c1_206938_209055 672
70 3300050494 nmdc:mga06z11_196_c1 nmdc:mga06z11_196_c1_14155_16272 672
71 3300050495 nmdc:mga04h51_1273_c1 nmdc:mga04h51_1273_c1_1781_3898 672
72 3300053090 Ga0500646_0000075 Ga0500646_0000075_11111_13231 672
73 3300053092 Ga0500583_0000347 Ga0500583_0000347_11461_13581 672
74 3300053092 Ga0500583_0002751 Ga0500583_0002751_2146_4263 672
75 3300053096 Ga0500641_0000001 Ga0500641_0000001_1077550_1079670 672
76 3300053131 Ga0500652_000001 Ga0500652_000001_398731_400851 672
77 3300053738 Ga0500613_000043 Ga0500613_000043_2663_4780 672
78 3300009979 Ga0105032_100001 Ga0105032_100001449 674
79 3300037312 Ga0395899_0037188 Ga0395899_0037188_422_2530 674
80 3300053093 Ga0500651_0000001 Ga0500651_0000001_450258_452381 674
81 3300053118 Ga0500594_0000074 Ga0500594_0000074_14293_16416 674
82 3300005467 Ga0070706_100083443 Ga0070706_1000834432 676
83 3300031727 Ga0316576_10002439 Ga0316576_100024391 678
84 3300025907 Ga0207645_10010062 Ga0207645_100100622 680
85 3300048927 Ga0496124_0013469 Ga0496124_0013469_3537_5654 680
86 3300005614 Ga0068856_100021180 Ga0068856_1000211803 681
87 3300026078 Ga0207702_10014634 Ga0207702_100146344 681
88 3300049571 Ga0501034_0072810 Ga0501034_0072810_721_2862 683
89 3300006852 Ga0075433_10003843 Ga0075433_100038434 685
90 3300006871 Ga0075434_100002202 Ga0075434_1000022025 685
91 3300007076 Ga0075435_100006037 Ga0075435_1000060376 685
92 3300009147 Ga0114129_10002057 Ga0114129_100020574 685
93 3300050507 nmdc:mga05p37_1278_c1 nmdc:mga05p37_1278_c1_3183_5333 685
94 3300050512 nmdc:mga0n895_2581_c1 nmdc:mga0n895_2581_c1_5453_7603 685
95 3300050513 nmdc:mga0rr50_20283_c1 nmdc:mga0rr50_20283_c1_671_2821 685
96 3300050515 nmdc:mga0a205_591_c1 nmdc:mga0a205_591_c1_18920_21070 685
97 3300010375 Ga0105239_10082046 Ga0105239_100820461 686
98 3300006844 Ga0075428_100000914 Ga0075428_10000091417 692
99 3300035398 Ga0316574_0000210 Ga0316574_0000210_3793_5991 693
100 3300006844 Ga0075428_100014653 Ga0075428_1000146532 696
101 3300031727 Ga0316576_10002658 Ga0316576_100026584 698
102 3300031727 Ga0316576_10007040 Ga0316576_100070405 699
103 3300046459 Ga0495629_0000112 Ga0495629_0000112_42965_45220 700
104 3300046473 Ga0495582_0003570 Ga0495582_0003570_684_2939 700
105 3300046663 Ga0495635_0003928 Ga0495635_0003928_3077_5332 700
106 3300046683 Ga0495658_0000082 Ga0495658_0000082_27357_29612 700
107 3300046689 Ga0495613_0002671 Ga0495613_0002671_2756_5011 700
108 3300047315 Ga0495581_0003360 Ga0495581_0003360_2915_5170 700
109 3300047322 Ga0495680_0000382 Ga0495680_0000382_19352_21607 700
110 3300048089 Ga0495614_0001525 Ga0495614_0001525_6151_8406 700
111 3300053085 Ga0495619_0002162 Ga0495619_0002162_7753_10008 700
112 3300046475 Ga0495639_0011342 Ga0495639_0011342_154_2415 701
113 3300006177 Ga0075362_10000407 Ga0075362_100004076 704
114 3300048911 Ga0496108_0096277 Ga0496108_0096277_259_2496 705
115 3300031711 Ga0265314_10008104 Ga0265314_100081043 708
116 3300046472 Ga0495580_0000508 Ga0495580_0000508_23553_25754 710
117 3300028653 Ga0265323_10001110 Ga0265323_100011109 712
118 3300028800 Ga0265338_10026066 Ga0265338_100260662 712
119 3300031242 Ga0265329_10000136 Ga0265329_1000013611 712
120 3300031344 Ga0265316_10000044 Ga0265316_10000044102 712
121 3300031344 Ga0265316_10002981 Ga0265316_1000298118 712
122 3300031712 Ga0265342_10001991 Ga0265342_100019912 712
123 3300025933 Ga0207706_10052876 Ga0207706_100528762 715
124 3300028573 Ga0265334_10011786 Ga0265334_100117862 716
125 3300031235 Ga0265330_10003543 Ga0265330_100035434 721
126 3300031344 Ga0265316_10000198 Ga0265316_1000019810 721
127 3300005545 Ga0070695_100000318 Ga0070695_10000031812 722
128 3300009093 Ga0105240_10158039 Ga0105240_101580392 724
129 3300031235 Ga0265330_10001047 Ga0265330_1000104714 724
130 3300005535 Ga0070684_100006288 Ga0070684_1000062884 726
131 3300048917 Ga0496114_0005243 Ga0496114_0005243_7460_9808 726
132 3300049589 Ga0501073_0021518 Ga0501073_0021518_133_2562 726
133 3300049744 Ga0501083_0016960 Ga0501083_0016960_2349_4778 726
134 3300005563 Ga0068855_100007613 Ga0068855_1000076138 729
135 3300028577 Ga0265318_10000130 Ga0265318_1000013012 729
136 3300031235 Ga0265330_10000906 Ga0265330_1000090612 729
137 3300031238 Ga0265332_10000348 Ga0265332_1000034830 729
138 3300031239 Ga0265328_10002477 Ga0265328_100024772 729
139 3300031240 Ga0265320_10002745 Ga0265320_100027456 729
140 3300031242 Ga0265329_10001047 Ga0265329_100010472 729
141 3300031249 Ga0265339_10008044 Ga0265339_100080442 729
142 3300031250 Ga0265331_10002108 Ga0265331_1000210812 729
143 3300031344 Ga0265316_10011114 Ga0265316_100111142 729
144 3300031595 Ga0265313_10012121 Ga0265313_100121214 729
145 3300031711 Ga0265314_10010243 Ga0265314_100102436 729
146 3300031712 Ga0265342_10007693 Ga0265342_100076932 729
147 3300031247 Ga0265340_10021886 Ga0265340_100218861 731
148 3300005356 Ga0070674_100020795 Ga0070674_1000207953 732
149 3300005563 Ga0068855_100011188 Ga0068855_1000111882 732
150 3300025937 Ga0207669_10001193 Ga0207669_100011933 732
151 3300026142 Ga0207698_10065213 Ga0207698_100652132 732
152 3300028800 Ga0265338_10019072 Ga0265338_100190722 732
153 3300031235 Ga0265330_10002937 Ga0265330_100029375 732
154 3300031712 Ga0265342_10018873 Ga0265342_100188733 732
155 3300044712 Ga0453684_0002628 Ga0453684_0002628_10131_12431 732
156 3300045051 Ga0451576_0004999 Ga0451576_0004999_12214_14514 732
157 3300031344 Ga0265316_10021776 Ga0265316_100217765 734
158 3300031344 Ga0265316_10033726 Ga0265316_100337263 734
159 3300034818 Ga0373950_0000009 Ga0373950_0000009_335969_338359 734
160 3300049583 Ga0501067_0001706 Ga0501067_0001706_1265_3655 734
161 3300049589 Ga0501073_0003317 Ga0501073_0003317_8498_10888 734
162 3300035724 Ga0373933_0000220 Ga0373933_0000220_18155_20605 735
163 3300044712 Ga0453684_0000034 Ga0453684_0000034_536263_538563 736
164 3300005530 Ga0070679_100018489 Ga0070679_1000184895 740
165 3300025921 Ga0207652_10064337 Ga0207652_100643371 740
166 3300048912 Ga0496109_0039013 Ga0496109_0039013_1541_3883 740
167 3300028666 Ga0265336_10007250 Ga0265336_100072503 742
168 3300028800 Ga0265338_10001775 Ga0265338_1000177524 742
169 3300031239 Ga0265328_10009803 Ga0265328_100098033 742
170 3300031240 Ga0265320_10001920 Ga0265320_100019203 742
171 3300031240 Ga0265320_10002441 Ga0265320_100024412 742
172 3300031249 Ga0265339_10001081 Ga0265339_1000108117 742
173 3300031249 Ga0265339_10001964 Ga0265339_100019647 742
174 3300031711 Ga0265314_10002112 Ga0265314_1000211210 742
175 3300031712 Ga0265342_10000676 Ga0265342_1000067619 742
176 3300035118 Ga0373954_0001889 Ga0373954_0001889_526_2853 742
177 3300035120 Ga0373957_0008152 Ga0373957_0008152_874_3201 742
178 3300035172 Ga0373955_0025446 Ga0373955_0025446_495_2951 742
179 3300036401 Ga0373937_0011301 Ga0373937_0011301_610_3066 742
180 3300036401 Ga0373937_0013046 Ga0373937_0013046_255_2582 742
181 3300034818 Ga0373950_0000027 Ga0373950_0000027_126551_128977 743
182 3300049571 Ga0501034_0000509 Ga0501034_0000509_36935_39364 743
183 3300049579 Ga0501043_0000356 Ga0501043_0000356_15990_18419 743
184 3300049580 Ga0501046_0002076 Ga0501046_0002076_12325_14754 743
185 3300049581 Ga0501047_0000001 Ga0501047_0000001_79116_81545 743
186 3300049582 Ga0501048_0001931 Ga0501048_0001931_12402_14831 743
187 3300049585 Ga0501069_0005728 Ga0501069_0005728_1427_3859 743
188 3300049586 Ga0501070_0000078 Ga0501070_0000078_75744_78176 743
189 3300049588 Ga0501072_0000019 Ga0501072_0000019_141067_143496 743
190 3300049589 Ga0501073_0001678 Ga0501073_0001678_2795_5224 743
191 3300049589 Ga0501073_0007574 Ga0501073_0007574_1049_3448 743
192 3300049590 Ga0501074_0006103 Ga0501074_0006103_3860_6289 743
193 3300049741 Ga0501079_0000013 Ga0501079_0000013_24317_26746 743
194 3300049742 Ga0501080_0011187 Ga0501080_0011187_2415_4844 743
195 3300049742 Ga0501080_0022031 Ga0501080_0022031_48_2480 743
196 3300049744 Ga0501083_0008798 Ga0501083_0008798_2285_4714 743
197 3300054114 Ga0501084_0000046 Ga0501084_0000046_49455_51884 743
198 3300060353 Ga0501082_0000392 Ga0501082_0000392_12325_14754 743
199 3300048917 Ga0496114_0003725 Ga0496114_0003725_6208_8550 744
200 3300027907 Ga0207428_10035124 Ga0207428_100351242 745
201 3300048907 Ga0496104_0066594 Ga0496104_0066594_119_2521 745
202 3300048917 Ga0496114_0008472 Ga0496114_0008472_702_3104 745
203 3300048918 Ga0496115_0034528 Ga0496115_0034528_376_2748 745
204 3300005340 Ga0070689_100018792 Ga0070689_1000187923 746
205 3300005347 Ga0070668_100038333 Ga0070668_1000383332 746
206 3300005353 Ga0070669_100002226 Ga0070669_1000022269 746
207 3300005844 Ga0068862_100031213 Ga0068862_1000312133 746
208 3300006881 Ga0068865_100066458 Ga0068865_1000664582 746
209 3300025907 Ga0207645_10004120 Ga0207645_100041205 746
210 3300025938 Ga0207704_10016276 Ga0207704_100162762 746
211 3300026118 Ga0207675_100019538 Ga0207675_1000195383 746
212 3300028380 Ga0268265_10026739 Ga0268265_100267393 746
213 3300046477 Ga0495664_0001853 Ga0495664_0001853_6199_8538 746
214 3300047319 Ga0495674_0001310 Ga0495674_0001310_18546_20885 746

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF21196

PcrA_UvrD_tudor

PcrA/UvrD tudor domain

764

807

0.99

PF00580

UvrD-helicase

UvrD/REP helicase N-terminal domain

32

296

0.98

PF13245

AAA_19

AAA domain

36

281

0.86

PF13361

UvrD_C

UvrD-like helicase C-terminal domain

301

664

0.86

PF13538

UvrD_C_2

UvrD-like helicase C-terminal domain

600

660

0.72

Structural Annotation

Top 5 Hits

ID Description Score Start End
2pjr-assembly1.cif.gz_G helicase product complex 0.9878 570 655
2is1-assembly2.cif.gz_B crystal structure of uvrd-dna-so4 complex 0.9574 21 661
2is1-assembly2.cif.gz_B crystal structure of uvrd-dna-so4 complex 0.9544 21 661
2is1-assembly1.cif.gz_A crystal structure of uvrd-dna-so4 complex 0.9509 23 666
2pjr-assembly1.cif.gz_F helicase product complex 0.9491 19 568
ID Description Score Start End Superfamily
2pjrG01 Alpha Beta;2-Layer Sandwich;Double Stranded RNA Binding Domain; 0.9826 583 655 3.30.160.800
2is6A02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A; 0.9615 131 207 1.10.10.160
2is1B02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A; 0.9537 131 207 1.10.10.160
2is1A02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A; 0.9479 131 207 1.10.10.160
af_P03018_114_187_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9471 134 198 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A1F8AXL3-F1-model_v4 UvrD-like helicase C-terminal domain-containing protein 0.9907 574 654 GO:0000725
GO:0003677
GO:0005524
GO:0005829
GO:0009378
GO:0016787
GO:0033202
GO:0036121
GO:0061749
GO:1990518
AF-A0A3D3EV41-F1-model_v4 DNA 3'-5' helicase (EC 5.6.2.4) 0.9794 239 381 GO:0000725
GO:0003677
GO:0005524
GO:0005829
GO:0009378
GO:0016787
GO:0016853
GO:0033202
GO:0036121
GO:0061749
GO:1990518
AF-A0A355FS48-F1-model_v4 DNA 3'-5' helicase (EC 5.6.2.4) 0.979 114 428 GO:0000725
GO:0003677
GO:0005524
GO:0005829
GO:0009378
GO:0016787
GO:0016853
GO:0033202
GO:0036121
GO:0061749
GO:1990518
AF-A0A0G1WJB9-F1-model_v4 DNA 3'-5' helicase (EC 5.6.2.4) 0.9715 19 416 GO:0000725
GO:0003677
GO:0003689
GO:0005524
GO:0005829
GO:0009378
GO:0016853
GO:0016887
GO:0033202
GO:0036121
GO:0061749
GO:0061775
GO:0140584
GO:0140665
GO:0140849
GO:1990518
AF-A0A1J5E204-F1-model_v4 DNA 3'-5' helicase (EC 5.6.2.4) 0.9695 25 653 GO:0000725
GO:0003677
GO:0003689
GO:0005524
GO:0005829
GO:0009378
GO:0016853
GO:0016887
GO:0033202
GO:0036121
GO:0061749
GO:0061775
GO:0140584
GO:0140665
GO:0140849
GO:1990518

Feature Viewer

pLDDT pTM Quality
84.39 0.77 High
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Predicted Structure (AlphaFold2)

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