F325684

General Info

Members Datasets Scaffolds Average Seq Length
214 140 428 872

Family's Representative Sequence

Representative Sequence 3300049568|Ga0501031_0009012|Ga0501031_0009012_965_3748
Length 927
Sequence MSDRPAWEPDGRRFTRRGLLKAAATLGRSLAALPFAGTWLSVAHALSCAEVVNVRDQTMSKLSQSHEENPYRLPRHVRPSRYELFLEPNLDSNTFAGQAVITIEVAHATSDIVFNAAELEIGSASIAGPGSQRAEGRVRLQPERERCVISFPTAMEPGTRHLSLSFKGVLNDKLRGFYRSSYSDSNGMKRAMAATQFEATDARRAFPCWDEPDFKAVFAVTLAVAPDLTALSNAAIRSEELKSGKKLIRFADTMTMSTYLVAFLVGRLEGTSPVMVGRTPVRIWTVPGKQHLTAFGLEIAAYSLAFFSEYYGIPYPGDKLDLIAIPDFASGAMENLGAITFRETALLVDQSRATRSERERVADVVAHENAHMWFGDLVTMSWWNGLWLNEAFATFMEMLAVAAWKPEWERWTSFSISRAAALAVDGLHSTRPIEYPVLAPKDADAMFDVLTYEKGASVLRMLEQFIGPDTFREGVRLYLRTHAYGNADTKDLWVAMAAAAKDDIPELLNQWVFAPGYPLISAEVTGSSQITISQQRFNYLASAPSGEAGQPATQPVWHVPIHVKIFLDERVETRRVLLSQEKMTVRLPAQWTSVILNEGGHGFYRVRYGHELLDRLERNGLTHLTPVERFNLVNDMWASTLAQMIPPSRYLHVTGHFKTERDHNVWTVVLGSFSTLDRLLTAQDRSLLQRFVQDRLGPAAHDLGWAPQRDETDLMRELRSDILRALGTLGNHSDTQQEAAQLYAAEQDRPGTVDPNLLPALVSILAFTGDQTRYEEFLQRFRKAPTPQEERRFLYALAAFRSPQLLKRTLEKTLNGEIRTQDAPMVVGAVLHNVYGRDTAWEFVKKHWDEMDRLFPKNGLRRMCSGIVGLATPELEREVQDFFGSRKIDLGGKTLQQYFEQLHVAISFREGKIKALRDYLSRMSELS

Samples

Sample ID Description Type Environment
1 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
28 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
29 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
30 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
31 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
32 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
36 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
37 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
41 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
42 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
43 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
44 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
45 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
46 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
53 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
54 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
55 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
56 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
57 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
58 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
59 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
60 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
61 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
62 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027364 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027424 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S PM (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
86 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027552 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes) (version 2) Metagenome Rhizosphere
88 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
89 3300027617 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
91 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
94 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
95 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
96 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
97 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
98 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
99 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
100 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
101 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
102 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
103 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
104 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
105 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
106 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
107 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
108 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
109 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
110 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
111 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
112 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
113 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
120 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
121 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
122 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
123 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
124 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
125 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
126 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
127 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
129 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
130 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
131 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
132 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
133 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
134 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
135 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
136 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
137 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
138 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
139 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
140 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.53
Metatranscriptomes 0.47
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.47
Nodule 0
Rhizoplane 1.4
Rhizosphere 98.13
Stem 0
Stem Tuber 0
Unclassified 1.87

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501031_0009012 3300049568 Bacteria 6494
2 JGI25407J50210_10000601 3300003373 Bacteria 7353
3 Ga0070690_100000029 3300005330 Bacteria 67338
4 Ga0070670_100001498 3300005331 Bacteria 18819
5 Ga0070670_100005324 3300005331 Bacteria 10854
6 Ga0068869_100004597 3300005334 Bacteria 8602
7 Ga0070666_10008073 3300005335 Bacteria 6517
8 Ga0070680_100001283 3300005336 Bacteria 18180
9 Ga0068868_100011338 3300005338 Bacteria 6490
10 Ga0068868_100017633 3300005338 Bacteria 5324
11 Ga0070689_100003655 3300005340 Bacteria 10262
12 Ga0070661_100013491 3300005344 Bacteria 5736
13 Ga0070669_100018520 3300005353 Bacteria 4976
14 Ga0070674_100000991 3300005356 Bacteria 14807
15 Ga0070674_100034102 3300005356 Bacteria 3396
16 Ga0070673_100012410 3300005364 Bacteria 5848
17 Ga0070673_100027810 3300005364 Bacteria 4196
18 Ga0070659_100012043 3300005366 Bacteria 6403
19 Ga0070714_100056662 3300005435 Bacteria 3353
20 Ga0070701_10000064 3300005438 Bacteria 28567
21 Ga0070694_100042891 3300005444 Bacteria 3023
22 Ga0070708_100003431 3300005445 Bacteria 12406
23 Ga0070708_100014328 3300005445 Bacteria 6521
24 Ga0070708_100049733 3300005445 Bacteria 3709
25 Ga0070663_100021348 3300005455 Bacteria 4305
26 Ga0070681_10003647 3300005458 Bacteria 14453
27 Ga0070681_10017791 3300005458 Bacteria 7101
28 Ga0070685_10000106 3300005466 Bacteria 52556
29 Ga0070706_100019857 3300005467 Bacteria 6194
30 Ga0070707_100000222 3300005468 Bacteria 56638
31 Ga0070707_100000923 3300005468 Bacteria 29141
32 Ga0070707_100058159 3300005468 Bacteria 3708
33 Ga0070698_100011921 3300005471 Bacteria 9224
34 Ga0070699_100006162 3300005518 Bacteria 10475
35 Ga0070699_100010439 3300005518 Bacteria 8037
36 Ga0070699_100023537 3300005518 Bacteria 5306
37 Ga0070679_100071035 3300005530 Bacteria 3472
38 Ga0070684_100028153 3300005535 Bacteria 4751
39 Ga0070697_100002294 3300005536 Bacteria 14686
40 Ga0070672_100000504 3300005543 Bacteria 22781
41 Ga0070686_100000016 3300005544 Bacteria 156304
42 Ga0070695_100009638 3300005545 Bacteria 5751
43 Ga0070695_100019138 3300005545 Bacteria 4165
44 Ga0070704_100000001 3300005549 Bacteria 193214
45 Ga0068857_100026235 3300005577 Bacteria 5135
46 Ga0068859_100000156 3300005617 Bacteria 65501
47 Ga0081455_10000903 3300005937 Bacteria 38277
48 Ga0081455_10001213 3300005937 Bacteria 32290
49 Ga0081538_10000431 3300005981 Bacteria 47122
50 Ga0081538_10001136 3300005981 Bacteria 28139
51 Ga0081538_10005428 3300005981 Bacteria 11446
52 Ga0081539_10001199 3300005985 Bacteria 46742
53 Ga0097621_100009402 3300006237 Bacteria 7091
54 Ga0068871_100025600 3300006358 Bacteria 4593
55 Ga0075428_100000006 3300006844 Bacteria 288592
56 Ga0075428_100000270 3300006844 Bacteria 51517
57 Ga0075428_100022385 3300006844 Bacteria 6997
58 Ga0075428_100037804 3300006844 Bacteria 5311
59 Ga0075430_100001182 3300006846 Bacteria 20939
60 Ga0075431_100000308 3300006847 Bacteria 38503
61 Ga0075431_100001652 3300006847 Bacteria 20895
62 Ga0075431_100002519 3300006847 Bacteria 17666
63 Ga0075431_100008572 3300006847 Bacteria 10238
64 Ga0075431_100027927 3300006847 Bacteria 5791
65 Ga0075431_100031528 3300006847 Bacteria 5459
66 Ga0075431_100033601 3300006847 Bacteria 5285
67 Ga0075433_10001034 3300006852 Bacteria 19853
68 Ga0075433_10020687 3300006852 Bacteria 5507
69 Ga0075433_10025286 3300006852 Bacteria 5017
70 Ga0075433_10027145 3300006852 Bacteria 4854
71 Ga0075434_100019554 3300006871 Bacteria 6556
72 Ga0075434_100037592 3300006871 Bacteria 4793
73 Ga0068865_100003713 3300006881 Bacteria 9168
74 Ga0075436_100009708 3300006914 Bacteria 6584
75 Ga0097620_100000156 3300006931 Bacteria 65501
76 Ga0075435_100001766 3300007076 Bacteria 14089
77 Ga0075435_100018542 3300007076 Bacteria 5296
78 Ga0111539_10000626 3300009094 Bacteria 45813
79 Ga0111539_10011747 3300009094 Bacteria 10986
80 Ga0111539_10076549 3300009094 Bacteria 3939
81 Ga0105245_10002894 3300009098 Bacteria 15396
82 Ga0114129_10000032 3300009147 Bacteria 111487
83 Ga0114129_10001800 3300009147 Bacteria 29212
84 Ga0114129_10003169 3300009147 Bacteria 23076
85 Ga0114129_10003192 3300009147 Bacteria 22997
86 Ga0114129_10006765 3300009147 Bacteria 16272
87 Ga0114129_10008012 3300009147 Bacteria 15042
88 Ga0114129_10017395 3300009147 Bacteria 10239
89 Ga0114129_10100053 3300009147 Bacteria 4012
90 Ga0114129_10103362 3300009147 Bacteria 3939
91 Ga0114129_10115014 3300009147 Bacteria 3709
92 Ga0105243_10001831 3300009148 Bacteria 18184
93 Ga0105241_10017174 3300009174 Bacteria 5316
94 Ga0105242_10002408 3300009176 Bacteria 14704
95 Ga0105248_10001662 3300009177 Bacteria 24740
96 Ga0105249_10049423 3300009553 Bacteria 3836
97 Ga0157374_10027852 3300013296 Bacteria 5101
98 Ga0157374_10083754 3300013296 Unclassified 3030
99 Ga0157378_10000606 3300013297 Bacteria 33671
100 Ga0157380_10023398 3300014326 Bacteria 4660
101 Ga0157380_10064092 3300014326 Unclassified 2949
102 Ga0157376_10000228 3300014969 Bacteria 39273
103 Ga0157376_10007872 3300014969 Bacteria 7641
104 Ga0197907_10257580 3300020069 Eukaryota 3231
105 Ga0207688_10001323 3300025901 Bacteria 12871
106 Ga0207645_10000243 3300025907 Bacteria 45207
107 Ga0207643_10005779 3300025908 Bacteria 6611
108 Ga0207684_10001313 3300025910 Bacteria 27290
109 Ga0207707_10008694 3300025912 Bacteria 8812
110 Ga0207662_10008068 3300025918 Bacteria 5747
111 Ga0207646_10000186 3300025922 Bacteria 85086
112 Ga0207646_10001490 3300025922 Bacteria 28831
113 Ga0207650_10032820 3300025925 Bacteria 3757
114 Ga0207659_10023134 3300025926 Bacteria 4144
115 Ga0207706_10000752 3300025933 Bacteria 33685
116 Ga0207670_10000019 3300025936 Bacteria 158360
117 Ga0207669_10001604 3300025937 Bacteria 9608
118 Ga0207704_10010784 3300025938 Bacteria 4472
119 Ga0207691_10000046 3300025940 Bacteria 99655
120 Ga0207691_10000354 3300025940 Bacteria 46194
121 Ga0207689_10001129 3300025942 Bacteria 25780
122 Ga0207651_10000498 3300025960 Bacteria 16498
123 Ga0207708_10000290 3300026075 Bacteria 39476
124 Ga0207708_10000841 3300026075 Bacteria 23117
125 Ga0207648_10004713 3300026089 Bacteria 13948
126 Ga0207648_10004812 3300026089 Bacteria 13777
127 Ga0207674_10007196 3300026116 Bacteria 12987
128 Ga0207683_10000185 3300026121 Bacteria 53317
129 Ga0207683_10000344 3300026121 Bacteria 42233
130 Ga0209967_1000006 3300027364 Bacteria 28051
131 Ga0209984_1000038 3300027424 Bacteria 13603
132 Ga0209995_1000131 3300027471 Bacteria 11761
133 Ga0209968_1000045 3300027526 Bacteria 22807
134 Ga0209999_1000463 3300027543 Bacteria 6272
135 Ga0209982_1000039 3300027552 Bacteria 11869
136 Ga0209970_1000015 3300027614 Bacteria 22521
137 Ga0210002_1000087 3300027617 Bacteria 14358
138 Ga0209971_1000120 3300027682 Bacteria 23235
139 Ga0209966_1000197 3300027695 Bacteria 24982
140 Ga0209998_10000115 3300027717 Bacteria 31688
141 Ga0209974_10000379 3300027876 Bacteria 14741
142 Ga0209974_10001617 3300027876 Bacteria 8152
143 Ga0207428_10000399 3300027907 Bacteria 53984
144 Ga0207428_10039006 3300027907 Bacteria 3857
145 Ga0265338_10028594 3300028800 Bacteria 5555
146 Ga0265327_10001801 3300031251 Bacteria 25152
147 Ga0307408_100029459 3300031548 Bacteria 3804
148 Ga0373931_0018863 3300035691 Bacteria 3435
149 Ga0439463_001739 3300042016 Bacteria 5676
150 Ga0451577_0002313 3300042876 Bacteria 23041
151 Ga0439440_0000785 3300042993 Bacteria 5487
152 Ga0453683_0008126 3300044673 Bacteria 7058
153 Ga0453684_0006415 3300044712 Bacteria 22388
154 Ga0451576_0023220 3300045051 Bacteria 6718
155 Ga0451576_0041763 3300045051 Bacteria 4847
156 Ga0495580_0002915 3300046472 Bacteria 14693
157 Ga0495657_0022058 3300046675 Bacteria 4566
158 Ga0495676_0049896 3300047321 Bacteria 3361
159 Ga0495680_0042864 3300047322 Bacteria 3587
160 Ga0495675_0024411 3300047444 Bacteria 3854
161 Ga0496108_0011054 3300048911 Bacteria 7330
162 Ga0496114_0012315 3300048917 Bacteria 6842
163 Ga0496115_0043411 3300048918 Bacteria 3586
164 Ga0501031_0004878 3300049568 Bacteria 8721
165 Ga0501032_0008759 3300049569 Bacteria 7371
166 Ga0501037_0009934 3300049573 Bacteria 6978
167 Ga0501037_0023805 3300049573 Bacteria 4528
168 Ga0501040_0016325 3300049576 Bacteria 4912
169 Ga0501040_0027289 3300049576 Bacteria 3844
170 Ga0501040_0029183 3300049576 Bacteria 3723
171 Ga0501041_0064506 3300049577 Bacteria 2243
172 Ga0501046_0002223 3300049580 Bacteria 18314
173 Ga0501046_0004602 3300049580 Bacteria 12455
174 Ga0501048_0077114 3300049582 Bacteria 2352
175 Ga0501068_0040306 3300049584 Bacteria 2803
176 Ga0501069_0000222 3300049585 Bacteria 25454
177 Ga0501070_0002350 3300049586 Bacteria 16613
178 Ga0501071_0006441 3300049587 Bacteria 7619
179 Ga0501071_0038103 3300049587 Bacteria 3435
180 Ga0501073_0011645 3300049589 Bacteria 6425
181 Ga0501076_0033570 3300049592 Unclassified 4007
182 Ga0501080_0030572 3300049742 Bacteria 5019
183 Ga0501081_0019621 3300049743 Bacteria 4503
184 Ga0501035_0020957 3300049822 Bacteria 6007
185 Ga0501045_0001265 3300049824 Bacteria 16773
186 nmdc:mga05p37_13840_c1 3300050507 Bacteria 9665
187 nmdc:mga05p37_17389_c1 3300050507 Bacteria 8676
188 nmdc:mga05p37_2688_c1 3300050507 Bacteria 20683
189 nmdc:mga05p37_94150_c2 3300050507 Bacteria 3366
190 nmdc:mga09592_2675_c1 3300050508 Bacteria 14412
191 nmdc:mga09592_842_c1 3300050508 Bacteria 23835
192 nmdc:mga0qj67_6399_c1 3300050509 Bacteria 8654
193 nmdc:mga06r32_1013_c1 3300050510 Bacteria 25222
194 nmdc:mga06r32_3390_c1 3300050510 Bacteria 14252
195 nmdc:mga06r32_60403_c1 3300050510 Unclassified 3648
196 nmdc:mga06r32_700_c1 3300050510 Bacteria 29256
197 nmdc:mga08y16_111721_c1 3300050511 Bacteria 2845
198 nmdc:mga08y16_1597_c1 3300050511 Bacteria 22903
199 nmdc:mga08y16_79665_c1 3300050511 Bacteria 3414
200 nmdc:mga0n895_20370_c1 3300050512 Bacteria 6185
201 nmdc:mga0n895_30654_c1 3300050512 Bacteria 5142
202 nmdc:mga0n895_3980_c1 3300050512 Bacteria 12015
203 nmdc:mga0rr50_1134_c1 3300050513 Bacteria 14497
204 nmdc:mga0rr50_12867_c1 3300050513 Bacteria 5424
205 nmdc:mga0rr50_63895_c1 3300050513 Bacteria 2782
206 nmdc:mga0a205_1987_c1 3300050515 Bacteria 17821
207 nmdc:mga0a205_3100_c1 3300050515 Bacteria 14742
208 nmdc:mga0a205_8468_c1 3300050515 Bacteria 9360
209 Ga0500616_0000008 3300053153 Bacteria 785239
210 Ga0501084_0013312 3300054114 Bacteria 6806
211 Ga0501084_0065803 3300054114 Bacteria 3033
212 Ga0501082_0032503 3300060353 Bacteria 4500
213 Ga0530510_0002554 3300061734 Bacteria 12512
214 Ga0530510_0012244 3300061734 Bacteria 6021
215 Ga0501031_0009012
216 JGI25407J50210_10000601
217 Ga0070690_100000029
218 Ga0070670_100001498
219 Ga0070670_100005324
220 Ga0068869_100004597
221 Ga0070666_10008073
222 Ga0070680_100001283
223 Ga0068868_100011338
224 Ga0068868_100017633
225 Ga0070689_100003655
226 Ga0070661_100013491
227 Ga0070669_100018520
228 Ga0070674_100000991
229 Ga0070674_100034102
230 Ga0070673_100012410
231 Ga0070673_100027810
232 Ga0070659_100012043
233 Ga0070714_100056662
234 Ga0070701_10000064
235 Ga0070694_100042891
236 Ga0070708_100003431
237 Ga0070708_100014328
238 Ga0070708_100049733
239 Ga0070663_100021348
240 Ga0070681_10003647
241 Ga0070681_10017791
242 Ga0070685_10000106
243 Ga0070706_100019857
244 Ga0070707_100000222
245 Ga0070707_100000923
246 Ga0070707_100058159
247 Ga0070698_100011921
248 Ga0070699_100006162
249 Ga0070699_100010439
250 Ga0070699_100023537
251 Ga0070679_100071035
252 Ga0070684_100028153
253 Ga0070697_100002294
254 Ga0070672_100000504
255 Ga0070686_100000016
256 Ga0070695_100009638
257 Ga0070695_100019138
258 Ga0070704_100000001
259 Ga0068857_100026235
260 Ga0068859_100000156
261 Ga0081455_10000903
262 Ga0081455_10001213
263 Ga0081538_10000431
264 Ga0081538_10001136
265 Ga0081538_10005428
266 Ga0081539_10001199
267 Ga0097621_100009402
268 Ga0068871_100025600
269 Ga0075428_100000006
270 Ga0075428_100000270
271 Ga0075428_100022385
272 Ga0075428_100037804
273 Ga0075430_100001182
274 Ga0075431_100000308
275 Ga0075431_100001652
276 Ga0075431_100002519
277 Ga0075431_100008572
278 Ga0075431_100027927
279 Ga0075431_100031528
280 Ga0075431_100033601
281 Ga0075433_10001034
282 Ga0075433_10020687
283 Ga0075433_10025286
284 Ga0075433_10027145
285 Ga0075434_100019554
286 Ga0075434_100037592
287 Ga0068865_100003713
288 Ga0075436_100009708
289 Ga0097620_100000156
290 Ga0075435_100001766
291 Ga0075435_100018542
292 Ga0111539_10000626
293 Ga0111539_10011747
294 Ga0111539_10076549
295 Ga0105245_10002894
296 Ga0114129_10000032
297 Ga0114129_10001800
298 Ga0114129_10003169
299 Ga0114129_10003192
300 Ga0114129_10006765
301 Ga0114129_10008012
302 Ga0114129_10017395
303 Ga0114129_10100053
304 Ga0114129_10103362
305 Ga0114129_10115014
306 Ga0105243_10001831
307 Ga0105241_10017174
308 Ga0105242_10002408
309 Ga0105248_10001662
310 Ga0105249_10049423
311 Ga0157374_10027852
312 Ga0157374_10083754
313 Ga0157378_10000606
314 Ga0157380_10023398
315 Ga0157380_10064092
316 Ga0157376_10000228
317 Ga0157376_10007872
318 Ga0197907_10257580
319 Ga0207688_10001323
320 Ga0207645_10000243
321 Ga0207643_10005779
322 Ga0207684_10001313
323 Ga0207707_10008694
324 Ga0207662_10008068
325 Ga0207646_10000186
326 Ga0207646_10001490
327 Ga0207650_10032820
328 Ga0207659_10023134
329 Ga0207706_10000752
330 Ga0207670_10000019
331 Ga0207669_10001604
332 Ga0207704_10010784
333 Ga0207691_10000046
334 Ga0207691_10000354
335 Ga0207689_10001129
336 Ga0207651_10000498
337 Ga0207708_10000290
338 Ga0207708_10000841
339 Ga0207648_10004713
340 Ga0207648_10004812
341 Ga0207674_10007196
342 Ga0207683_10000185
343 Ga0207683_10000344
344 Ga0209967_1000006
345 Ga0209984_1000038
346 Ga0209995_1000131
347 Ga0209968_1000045
348 Ga0209999_1000463
349 Ga0209982_1000039
350 Ga0209970_1000015
351 Ga0210002_1000087
352 Ga0209971_1000120
353 Ga0209966_1000197
354 Ga0209998_10000115
355 Ga0209974_10000379
356 Ga0209974_10001617
357 Ga0207428_10000399
358 Ga0207428_10039006
359 Ga0265338_10028594
360 Ga0265327_10001801
361 Ga0307408_100029459
362 Ga0373931_0018863
363 Ga0439463_001739
364 Ga0451577_0002313
365 Ga0439440_0000785
366 Ga0453683_0008126
367 Ga0453684_0006415
368 Ga0451576_0023220
369 Ga0451576_0041763
370 Ga0495580_0002915
371 Ga0495657_0022058
372 Ga0495676_0049896
373 Ga0495680_0042864
374 Ga0495675_0024411
375 Ga0496108_0011054
376 Ga0496114_0012315
377 Ga0496115_0043411
378 Ga0501031_0004878
379 Ga0501032_0008759
380 Ga0501037_0009934
381 Ga0501037_0023805
382 Ga0501040_0016325
383 Ga0501040_0027289
384 Ga0501040_0029183
385 Ga0501041_0064506
386 Ga0501046_0002223
387 Ga0501046_0004602
388 Ga0501048_0077114
389 Ga0501068_0040306
390 Ga0501069_0000222
391 Ga0501070_0002350
392 Ga0501071_0006441
393 Ga0501071_0038103
394 Ga0501073_0011645
395 Ga0501076_0033570
396 Ga0501080_0030572
397 Ga0501081_0019621
398 Ga0501035_0020957
399 Ga0501045_0001265
400 nmdc:mga05p37_13840_c1
401 nmdc:mga05p37_17389_c1
402 nmdc:mga05p37_2688_c1
403 nmdc:mga05p37_94150_c2
404 nmdc:mga09592_2675_c1
405 nmdc:mga09592_842_c1
406 nmdc:mga0qj67_6399_c1
407 nmdc:mga06r32_1013_c1
408 nmdc:mga06r32_3390_c1
409 nmdc:mga06r32_60403_c1
410 nmdc:mga06r32_700_c1
411 nmdc:mga08y16_111721_c1
412 nmdc:mga08y16_1597_c1
413 nmdc:mga08y16_79665_c1
414 nmdc:mga0n895_20370_c1
415 nmdc:mga0n895_30654_c1
416 nmdc:mga0n895_3980_c1
417 nmdc:mga0rr50_1134_c1
418 nmdc:mga0rr50_12867_c1
419 nmdc:mga0rr50_63895_c1
420 nmdc:mga0a205_1987_c1
421 nmdc:mga0a205_3100_c1
422 nmdc:mga0a205_8468_c1
423 Ga0500616_0000008
424 Ga0501084_0013312
425 Ga0501084_0065803
426 Ga0501082_0032503
427 Ga0530510_0002554
428 Ga0530510_0012244

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01433

Peptidase_M1

Peptidase family M1 domain

295

511

0.98

PF11838

ERAP1_C

ERAP1-like C-terminal domain

593

904

0.94

PF17900

Peptidase_M1_N

Peptidase M1 N-terminal domain

78

260

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
5cu5-assembly2.cif.gz_B crystal structure of erap2 without catalytic zn(ii) atom 0.9347 20 886
5cu5-assembly1.cif.gz_A crystal structure of erap2 without catalytic zn(ii) atom 0.9331 20 886
3se6-assembly2.cif.gz_B crystal structure of the human endoplasmic reticulum aminopeptidase 2 0.9319 20 886
4e36-assembly2.cif.gz_B crystal structure of the human endoplasmic reticulum aminopeptidase 2 variant n392k 0.931 20 886
6ydx-assembly2.cif.gz_B insulin-regulated aminopeptidase complexed with a macrocyclic peptidic inhibitor 0.9304 20 884
ID Description Score Start End Superfamily
af_Q4E686_206_448_1.10.390.10 Mainly Alpha;Orthogonal Bundle;Neutral Protease; domain 2;Neutral Protease Domain 2 0.9728 234 477 1.10.390.10
af_Q9USX1_7_213_2.60.40.1730 Mainly Beta;Sandwich;Immunoglobulin-like;tricorn interacting facor f3 domain 0.9698 21 227 2.60.40.1730
af_Q9VFX0_332_577_1.10.390.10 Mainly Alpha;Orthogonal Bundle;Neutral Protease; domain 2;Neutral Protease Domain 2 0.9687 246 477 1.10.390.10
af_Q4E686_206_448_1.10.390.10 Mainly Alpha;Orthogonal Bundle;Neutral Protease; domain 2;Neutral Protease Domain 2 0.9649 234 477 1.10.390.10
af_Q8SWX4_261_515_1.10.390.10 Mainly Alpha;Orthogonal Bundle;Neutral Protease; domain 2;Neutral Protease Domain 2 0.9643 230 477 1.10.390.10
ID Description Score Start End GO Terms
AF-A0A522E181-F1-model_v4 M1 family peptidase 0.9847 25 351 GO:0005615
GO:0005737
GO:0006508
GO:0008270
GO:0016020
GO:0042277
GO:0043171
GO:0070006
AF-A0A2G6KCX6-F1-model_v4 Aminopeptidase N (EC 3.4.11.2) 0.9817 18 400 GO:0005615
GO:0005737
GO:0006508
GO:0008270
GO:0016020
GO:0042277
GO:0043171
GO:0070006
AF-A0A381TQG3-F1-model_v4 Uncharacterized protein 0.9803 20 464 GO:0005615
GO:0005737
GO:0006508
GO:0008270
GO:0016020
GO:0042277
GO:0043171
GO:0070006
AF-A0A2P2ID84-F1-model_v4 Puromycin-sensitive aminopeptidase 0.9785 138 344 GO:0005615
GO:0005737
GO:0005886
GO:0006508
GO:0008270
GO:0042277
GO:0043171
GO:0070006
AF-A0A522E181-F1-model_v4 M1 family peptidase 0.9784 25 351 GO:0005615
GO:0005737
GO:0006508
GO:0008270
GO:0016020
GO:0042277
GO:0043171
GO:0070006

Map