F325532

General Info

Members Datasets Scaffolds Average Seq Length
214 164 428 468

Family's Representative Sequence

Representative Sequence 3300044693|Ga0466961_0011084|Ga0466961_0011084_2911_4437
Length 508
Sequence VHWNPEASKGRVTHGKLGRTDPGREVDAMTLPSGTPTQQFIGGEWRDGAEGTFEVLDPATGDVLCEVPRAGAADVCAAVTAAADAQPEWAATAPREKAEVLRRAFDLMLARREELAYLMALEMGKSLVDARAEVTYAAEFFRWFSEEAPRIGGELRTAPAGANKILTFRKPVGVALLLTPWNFPAAMATRKIGPALAAGCTVVLKPAHETPLTALVLGQVLAEAGAPDGVVNVVTTDRAAEAVEAALGDPRVRKLSFTGSTEVGRILLKQAADRIVNCSMELGGNDPFLILEDADLDAAVEGAMLAKMRNGGQACTAANRFLVAESVADDFAKRLAERMAALKVGPGTAEETQLGPMVSAKAVDGIADKVDRSVAAGARAVIGGQRPDGPGFFYPATVLDQVPRESAVAVEEVFGPVAPIIRVKDDADALAVANASEMGLTGYVYTRDLSRGLRVCEQLEVGMVGLNRGLVSDPAAPFGGVKQSGIGREGGYEGIEEYLETTYVATSW

Samples

Sample ID Description Type Environment
1 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
22 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
23 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
31 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
32 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
33 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
34 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
35 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
36 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
37 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
38 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
46 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
47 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
48 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
51 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
52 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
53 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
54 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
55 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
56 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
87 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
90 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
91 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
92 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
93 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
94 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
95 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
96 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
97 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
98 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
99 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
100 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
101 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
102 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
103 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
104 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
105 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
106 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
107 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
108 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
109 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
110 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
111 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
112 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
113 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
114 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
115 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
116 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
117 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
118 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
119 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
120 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
121 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
122 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
123 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
124 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
125 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
126 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
127 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
128 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
129 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
130 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
131 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
132 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
137 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
138 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
139 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
140 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
141 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
142 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
143 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
144 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
145 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
146 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
147 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
148 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
149 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
150 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
151 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
152 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
153 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
154 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
155 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
156 2643221549 Agromyces sp. Root1464 Isolate Unclassified
157 2643221619 Agromyces sp. Root81 Isolate Unclassified
158 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
159 2808606372 Agromyces sp. 23-23 Isolate Unclassified
160 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
161 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
162 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
163 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root
164 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 94.39
Metatranscriptomes 0.93
Isolates 4.67

Biome Distribution

Category Percentage (%)
Aerial Root 0.93
Bulb 0
Endosphere 1.4
Nodule 0.93
Rhizoplane 3.27
Rhizosphere 88.32
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466961_0011084 3300044693 Bacteria 5762
2 Ga0070658_10023571 3300005327 Bacteria 4939
3 Ga0068869_100054711 3300005334 Bacteria 2906
4 Ga0070680_100112389 3300005336 Bacteria 2268
5 Ga0070660_100070718 3300005339 Bacteria 2723
6 Ga0070689_100044768 3300005340 Bacteria 3405
7 Ga0070669_100035204 3300005353 Bacteria 3627
8 Ga0070671_100010773 3300005355 Bacteria 7334
9 Ga0070688_100054856 3300005365 Bacteria 2498
10 Ga0070709_10001350 3300005434 Bacteria 13384
11 Ga0070713_100002535 3300005436 Bacteria 11948
12 Ga0070711_100073865 3300005439 Bacteria 2411
13 Ga0070705_100093493 3300005440 Bacteria 1880
14 Ga0070708_100007223 3300005445 Bacteria 8876
15 Ga0070663_100050418 3300005455 Bacteria 2960
16 Ga0070706_100016446 3300005467 Bacteria 6838
17 Ga0070707_100049071 3300005468 Bacteria 4046
18 Ga0070699_100000652 3300005518 Bacteria 32442
19 Ga0070679_100054357 3300005530 Bacteria 3986
20 Ga0070697_100146387 3300005536 Bacteria 1989
21 Ga0070695_100056536 3300005545 Bacteria 2532
22 Ga0070696_100000232 3300005546 Bacteria 33728
23 Ga0070693_100010385 3300005547 Bacteria 4666
24 Ga0070665_100024843 3300005548 Bacteria 6037
25 Ga0070665_100048137 3300005548 Bacteria 4281
26 Ga0070665_100098915 3300005548 Bacteria 2922
27 Ga0070665_100128595 3300005548 Bacteria 2536
28 Ga0068855_100003440 3300005563 Bacteria 19371
29 Ga0068855_100020247 3300005563 Bacteria 7985
30 Ga0068855_100039936 3300005563 Bacteria 5571
31 Ga0068855_100218186 3300005563 Bacteria 2140
32 Ga0068854_100002011 3300005578 Bacteria 12449
33 Ga0068854_100133571 3300005578 Bacteria 1897
34 Ga0068856_100024866 3300005614 Bacteria 5834
35 Ga0068852_100046490 3300005616 Bacteria 3699
36 Ga0068859_100071605 3300005617 Bacteria 3502
37 Ga0068851_10015190 3300005834 Bacteria 3665
38 Ga0068870_10016408 3300005840 Bacteria 3537
39 Ga0081455_10022969 3300005937 Bacteria 5815
40 Ga0081538_10052763 3300005981 Bacteria 2426
41 Ga0081540_1033632 3300005983 Bacteria 2780
42 Ga0081539_10003448 3300005985 Bacteria 19419
43 Ga0075368_10007997 3300006042 Bacteria 3750
44 Ga0075432_10013904 3300006058 Bacteria 2740
45 Ga0075430_100050691 3300006846 Bacteria 3499
46 Ga0075433_10024413 3300006852 Bacteria 5101
47 Ga0075434_100115455 3300006871 Bacteria 2697
48 Ga0075436_100001550 3300006914 Bacteria 15696
49 Ga0097620_100071607 3300006931 Bacteria 3502
50 Ga0075435_100021409 3300007076 Bacteria 4973
51 Ga0105240_10016112 3300009093 Bacteria 10128
52 Ga0105240_10030558 3300009093 Bacteria 6999
53 Ga0105240_10053378 3300009093 Bacteria 5073
54 Ga0105240_10173640 3300009093 Bacteria 2550
55 Ga0105247_10015611 3300009101 Bacteria 4548
56 Ga0105241_10016869 3300009174 Bacteria 5360
57 Ga0105241_10028739 3300009174 Bacteria 4143
58 Ga0105237_10035355 3300009545 Bacteria 5056
59 Ga0105237_10068731 3300009545 Bacteria 3537
60 Ga0105237_10070070 3300009545 Bacteria 3502
61 Ga0105237_10122083 3300009545 Bacteria 2599
62 Ga0105238_10019388 3300009551 Bacteria 6927
63 Ga0105238_10023597 3300009551 Bacteria 6268
64 Ga0105238_10024591 3300009551 Bacteria 6139
65 Ga0105238_10060800 3300009551 Bacteria 3781
66 Ga0105239_10015567 3300010375 Bacteria 8422
67 Ga0105239_10062087 3300010375 Bacteria 4102
68 Ga0105239_10094097 3300010375 Bacteria 3309
69 Ga0105246_10001370 3300011119 Bacteria 14367
70 Ga0157370_10016260 3300013104 Bacteria 7538
71 Ga0157374_10042261 3300013296 Bacteria 4204
72 Ga0157379_10144722 3300014968 Bacteria 2143
73 Ga0206354_10852565 3300020081 Bacteria 2747
74 Ga0206353_11309551 3300020082 Bacteria 2011
75 Ga0207688_10029734 3300025901 Bacteria 3010
76 Ga0207647_10044298 3300025904 Bacteria 2781
77 Ga0207647_10072712 3300025904 Bacteria 2073
78 Ga0207699_10012580 3300025906 Bacteria 4308
79 Ga0207643_10001003 3300025908 Bacteria 16820
80 Ga0207705_10005806 3300025909 Bacteria 9193
81 Ga0207705_10053957 3300025909 Bacteria 2897
82 Ga0207654_10078339 3300025911 Bacteria 1983
83 Ga0207707_10086016 3300025912 Bacteria 2748
84 Ga0207695_10002245 3300025913 Bacteria 28948
85 Ga0207695_10012142 3300025913 Bacteria 10352
86 Ga0207695_10021631 3300025913 Bacteria 7332
87 Ga0207695_10064085 3300025913 Bacteria 3786
88 Ga0207671_10000843 3300025914 Bacteria 38908
89 Ga0207660_10116265 3300025917 Bacteria 2020
90 Ga0207652_10039025 3300025921 Bacteria 4028
91 Ga0207681_10032575 3300025923 Bacteria 3413
92 Ga0207694_10009071 3300025924 Bacteria 7506
93 Ga0207694_10059331 3300025924 Bacteria 2975
94 Ga0207650_10003126 3300025925 Bacteria 11406
95 Ga0207700_10040767 3300025928 Bacteria 3391
96 Ga0207664_10135494 3300025929 Bacteria 2078
97 Ga0207644_10003166 3300025931 Bacteria 10587
98 Ga0207670_10045556 3300025936 Bacteria 2908
99 Ga0207689_10001342 3300025942 Bacteria 23684
100 Ga0207679_10027878 3300025945 Bacteria 3912
101 Ga0207667_10017386 3300025949 Bacteria 8094
102 Ga0207667_10030131 3300025949 Bacteria 5872
103 Ga0207667_10036081 3300025949 Bacteria 5302
104 Ga0207667_10041088 3300025949 Bacteria 4920
105 Ga0207640_10021061 3300025981 Bacteria 3879
106 Ga0207639_10104197 3300026041 Bacteria 2300
107 Ga0207678_10089978 3300026067 Bacteria 2623
108 Ga0207708_10058362 3300026075 Bacteria 2945
109 Ga0207702_10012663 3300026078 Bacteria 7020
110 Ga0207702_10023196 3300026078 Bacteria 5146
111 Ga0207641_10064212 3300026088 Bacteria 3137
112 Ga0207676_10008633 3300026095 Bacteria 7242
113 Ga0207674_10036403 3300026116 Bacteria 5129
114 Ga0207674_10082378 3300026116 Bacteria 3219
115 Ga0207683_10001685 3300026121 Bacteria 19765
116 Ga0207428_10003343 3300027907 Bacteria 15596
117 Ga0268266_10015182 3300028379 Bacteria 6614
118 Ga0268266_10129632 3300028379 Bacteria 2254
119 Ga0268265_10073625 3300028380 Bacteria 2669
120 Ga0307515_10124978 3300028794 Bacteria 2882
121 Ga0307513_10119312 3300031456 Bacteria 2609
122 Ga0316576_10062982 3300031727 Bacteria 2721
123 Ga0307409_100039738 3300031995 Bacteria 3494
124 Ga0307416_100025695 3300032002 Bacteria 4323
125 Ga0307411_10069790 3300032005 Bacteria 2375
126 Ga0395900_0143268 3300037418 Bacteria 2446
127 Ga0395898_0017415 3300037466 Bacteria 7340
128 Ga0436364_0987571 3300037853 Bacteria 2558
129 Ga0439448_0002064 3300042005 Bacteria 5389
130 Ga0450894_000003 3300042131 Bacteria 40719
131 Ga0450896_002441 3300042133 Bacteria 2399
132 Ga0450898_001485 3300042134 Bacteria 3101
133 Ga0450899_000816 3300042135 Bacteria 3548
134 Ga0450906_002464 3300042145 Bacteria 4048
135 Ga0439458_0006310 3300042157 Bacteria 2644
136 Ga0466972_0006389 3300044658 Bacteria 5918
137 Ga0466961_0004536 3300044693 Bacteria 8709
138 Ga0466961_0008555 3300044693 Bacteria 6520
139 Ga0466961_0038843 3300044693 Bacteria 3053
140 Ga0466963_0001868 3300044694 Bacteria 11485
141 Ga0466963_0013197 3300044694 Bacteria 5070
142 Ga0466963_0163457 3300044694 Bacteria 1550
143 Ga0466971_0060479 3300044719 Bacteria 1712
144 Ga0466957_0018426 3300044842 Bacteria 4101
145 Ga0466957_0032583 3300044842 Bacteria 3121
146 Ga0466957_0099530 3300044842 Bacteria 1831
147 Ga0466959_0016848 3300045049 Bacteria 5348
148 Ga0466959_0078495 3300045049 Bacteria 2381
149 Ga0466958_0000725 3300045836 Bacteria 14415
150 Ga0466958_0049186 3300045836 Bacteria 2550
151 Ga0466967_0002545 3300045976 Bacteria 11425
152 Ga0466967_0005189 3300045976 Bacteria 8968
153 Ga0466967_0005425 3300045976 Bacteria 8837
154 Ga0466967_0011975 3300045976 Bacteria 6609
155 Ga0466967_0070026 3300045976 Bacteria 3137
156 Ga0466967_0124284 3300045976 Bacteria 2388
157 Ga0495603_0007428 3300046455 Bacteria 6591
158 Ga0495651_0108534 3300046462 Bacteria 2055
159 Ga0495580_0020941 3300046472 Bacteria 4830
160 Ga0495664_0005575 3300046477 Bacteria 6920
161 Ga0495594_0066636 3300046499 Bacteria 1998
162 Ga0495628_0002350 3300046516 Bacteria 17089
163 Ga0495648_0055148 3300046524 Bacteria 2397
164 Ga0495587_0023835 3300046536 Bacteria 3758
165 Ga0495645_0097294 3300046543 Bacteria 2096
166 Ga0495589_0025790 3300046794 Bacteria 2980
167 Ga0495676_0003767 3300047321 Bacteria 13773
168 Ga0495676_0004642 3300047321 Bacteria 12585
169 Ga0496100_0127227 3300048903 Bacteria 1789
170 Ga0496102_0012492 3300048905 Bacteria 7352
171 Ga0496102_0208109 3300048905 Bacteria 1844
172 Ga0496104_0092554 3300048907 Bacteria 2890
173 Ga0496110_0001752 3300048913 Bacteria 16001
174 Ga0496112_0213913 3300048915 Bacteria 1884
175 Ga0496113_0214686 3300048916 Bacteria 1532
176 Ga0496117_0000108 3300048920 Bacteria 185583
177 Ga0496119_0000061 3300048922 Bacteria 171442
178 Ga0496120_0003622 3300048923 Bacteria 13866
179 Ga0501034_0082109 3300049571 Bacteria 3225
180 Ga0501037_0050882 3300049573 Bacteria 3031
181 Ga0501038_0006355 3300049574 Bacteria 10937
182 Ga0501038_0073103 3300049574 Bacteria 2904
183 Ga0501043_0130194 3300049579 Bacteria 1972
184 Ga0501067_0001169 3300049583 Bacteria 14235
185 Ga0501067_0055186 3300049583 Bacteria 2202
186 Ga0501068_0004318 3300049584 Bacteria 7722
187 Ga0501070_0006282 3300049586 Bacteria 10111
188 Ga0501071_0011214 3300049587 Bacteria 6029
189 Ga0501072_0008016 3300049588 Bacteria 8016
190 Ga0501073_0001292 3300049589 Bacteria 18392
191 Ga0501074_0004602 3300049590 Bacteria 9878
192 Ga0501074_0068413 3300049590 Bacteria 2553
193 Ga0501080_0009301 3300049742 Bacteria 8960
194 Ga0501083_0018594 3300049744 Bacteria 4843
195 nmdc:mga03n38_20232_c1 3300050490 Bacteria 2659
196 nmdc:mga09592_83756_c1 3300050508 Bacteria 2718
197 nmdc:mga0qj67_42907_c1 3300050509 Bacteria 3561
198 nmdc:mga06r32_79915_c1 3300050510 Bacteria 3181
199 nmdc:mga0n895_52901_c1 3300050512 Bacteria 3988
200 nmdc:mga0rr50_7135_c1 3300050513 Bacteria 6863
201 Ga0495601_0003195 3300053077 Bacteria 9381
202 Ga0500616_0016651 3300053153 Bacteria 4180
203 Ga0501082_0102513 3300060353 Bacteria 2475
204 Ga0466962_0016013 3300061719 Bacteria 3617
205 2585313352 2582581314 Bacteria 11452267
206 2643766664 2643221549 Bacteria 4042819
207 2644113414 2643221619 Bacteria 4158469
208 2747953717 2747842429 Bacteria 3914386
209 2808903795 2808606372 Bacteria 4649509
210 2862391849 2862382967 Bacteria 10317375
211 2863408944 2863404153 Bacteria 9672205
212 2984578047 2984576629 Bacteria 4248407
213 2990257561 2990256926 Bacteria 4252839
214 8008563100 8008558824 Bacteria 10610750
215 Ga0466961_0011084
216 Ga0070658_10023571
217 Ga0068869_100054711
218 Ga0070680_100112389
219 Ga0070660_100070718
220 Ga0070689_100044768
221 Ga0070669_100035204
222 Ga0070671_100010773
223 Ga0070688_100054856
224 Ga0070709_10001350
225 Ga0070713_100002535
226 Ga0070711_100073865
227 Ga0070705_100093493
228 Ga0070708_100007223
229 Ga0070663_100050418
230 Ga0070706_100016446
231 Ga0070707_100049071
232 Ga0070699_100000652
233 Ga0070679_100054357
234 Ga0070697_100146387
235 Ga0070695_100056536
236 Ga0070696_100000232
237 Ga0070693_100010385
238 Ga0070665_100024843
239 Ga0070665_100048137
240 Ga0070665_100098915
241 Ga0070665_100128595
242 Ga0068855_100003440
243 Ga0068855_100020247
244 Ga0068855_100039936
245 Ga0068855_100218186
246 Ga0068854_100002011
247 Ga0068854_100133571
248 Ga0068856_100024866
249 Ga0068852_100046490
250 Ga0068859_100071605
251 Ga0068851_10015190
252 Ga0068870_10016408
253 Ga0081455_10022969
254 Ga0081538_10052763
255 Ga0081540_1033632
256 Ga0081539_10003448
257 Ga0075368_10007997
258 Ga0075432_10013904
259 Ga0075430_100050691
260 Ga0075433_10024413
261 Ga0075434_100115455
262 Ga0075436_100001550
263 Ga0097620_100071607
264 Ga0075435_100021409
265 Ga0105240_10016112
266 Ga0105240_10030558
267 Ga0105240_10053378
268 Ga0105240_10173640
269 Ga0105247_10015611
270 Ga0105241_10016869
271 Ga0105241_10028739
272 Ga0105237_10035355
273 Ga0105237_10068731
274 Ga0105237_10070070
275 Ga0105237_10122083
276 Ga0105238_10019388
277 Ga0105238_10023597
278 Ga0105238_10024591
279 Ga0105238_10060800
280 Ga0105239_10015567
281 Ga0105239_10062087
282 Ga0105239_10094097
283 Ga0105246_10001370
284 Ga0157370_10016260
285 Ga0157374_10042261
286 Ga0157379_10144722
287 Ga0206354_10852565
288 Ga0206353_11309551
289 Ga0207688_10029734
290 Ga0207647_10044298
291 Ga0207647_10072712
292 Ga0207699_10012580
293 Ga0207643_10001003
294 Ga0207705_10005806
295 Ga0207705_10053957
296 Ga0207654_10078339
297 Ga0207707_10086016
298 Ga0207695_10002245
299 Ga0207695_10012142
300 Ga0207695_10021631
301 Ga0207695_10064085
302 Ga0207671_10000843
303 Ga0207660_10116265
304 Ga0207652_10039025
305 Ga0207681_10032575
306 Ga0207694_10009071
307 Ga0207694_10059331
308 Ga0207650_10003126
309 Ga0207700_10040767
310 Ga0207664_10135494
311 Ga0207644_10003166
312 Ga0207670_10045556
313 Ga0207689_10001342
314 Ga0207679_10027878
315 Ga0207667_10017386
316 Ga0207667_10030131
317 Ga0207667_10036081
318 Ga0207667_10041088
319 Ga0207640_10021061
320 Ga0207639_10104197
321 Ga0207678_10089978
322 Ga0207708_10058362
323 Ga0207702_10012663
324 Ga0207702_10023196
325 Ga0207641_10064212
326 Ga0207676_10008633
327 Ga0207674_10036403
328 Ga0207674_10082378
329 Ga0207683_10001685
330 Ga0207428_10003343
331 Ga0268266_10015182
332 Ga0268266_10129632
333 Ga0268265_10073625
334 Ga0307515_10124978
335 Ga0307513_10119312
336 Ga0316576_10062982
337 Ga0307409_100039738
338 Ga0307416_100025695
339 Ga0307411_10069790
340 Ga0395900_0143268
341 Ga0395898_0017415
342 Ga0436364_0987571
343 Ga0439448_0002064
344 Ga0450894_000003
345 Ga0450896_002441
346 Ga0450898_001485
347 Ga0450899_000816
348 Ga0450906_002464
349 Ga0439458_0006310
350 Ga0466972_0006389
351 Ga0466961_0004536
352 Ga0466961_0008555
353 Ga0466961_0038843
354 Ga0466963_0001868
355 Ga0466963_0013197
356 Ga0466963_0163457
357 Ga0466971_0060479
358 Ga0466957_0018426
359 Ga0466957_0032583
360 Ga0466957_0099530
361 Ga0466959_0016848
362 Ga0466959_0078495
363 Ga0466958_0000725
364 Ga0466958_0049186
365 Ga0466967_0002545
366 Ga0466967_0005189
367 Ga0466967_0005425
368 Ga0466967_0011975
369 Ga0466967_0070026
370 Ga0466967_0124284
371 Ga0495603_0007428
372 Ga0495651_0108534
373 Ga0495580_0020941
374 Ga0495664_0005575
375 Ga0495594_0066636
376 Ga0495628_0002350
377 Ga0495648_0055148
378 Ga0495587_0023835
379 Ga0495645_0097294
380 Ga0495589_0025790
381 Ga0495676_0003767
382 Ga0495676_0004642
383 Ga0496100_0127227
384 Ga0496102_0012492
385 Ga0496102_0208109
386 Ga0496104_0092554
387 Ga0496110_0001752
388 Ga0496112_0213913
389 Ga0496113_0214686
390 Ga0496117_0000108
391 Ga0496119_0000061
392 Ga0496120_0003622
393 Ga0501034_0082109
394 Ga0501037_0050882
395 Ga0501038_0006355
396 Ga0501038_0073103
397 Ga0501043_0130194
398 Ga0501067_0001169
399 Ga0501067_0055186
400 Ga0501068_0004318
401 Ga0501070_0006282
402 Ga0501071_0011214
403 Ga0501072_0008016
404 Ga0501073_0001292
405 Ga0501074_0004602
406 Ga0501074_0068413
407 Ga0501080_0009301
408 Ga0501083_0018594
409 nmdc:mga03n38_20232_c1
410 nmdc:mga09592_83756_c1
411 nmdc:mga0qj67_42907_c1
412 nmdc:mga06r32_79915_c1
413 nmdc:mga0n895_52901_c1
414 nmdc:mga0rr50_7135_c1
415 Ga0495601_0003195
416 Ga0500616_0016651
417 Ga0501082_0102513
418 Ga0466962_0016013
419 2585313352
420 2643766664
421 2644113414
422 2747953717
423 2808903795
424 2862391849
425 2863408944
426 2984578047
427 2990257561
428 8008563100

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00171

Aldedh

Aldehyde dehydrogenase family

45

504

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ywv-assembly1.cif.gz_B structural insight into the substrate inhibition mechanism of nadp+-dependent succinic semialdehyde dehydrogenase from streptococcus pyogenes 0.9539 43 460
3haz-assembly1.cif.gz_A-2 crystal structure of bifunctional proline utilization a (puta) protein 0.9261 43 457
3haz-assembly1.cif.gz_B-2 crystal structure of bifunctional proline utilization a (puta) protein 0.9246 43 457
2d4e-assembly1.cif.gz_B crystal structure of the hpcc from thermus thermophilus hb8 0.9212 23 462
6bsn-assembly1.cif.gz_A-2 structure of proline utilization a (puta) with proline bound in remote sites 0.9206 43 457
ID Description Score Start End Superfamily
af_Q2FWD6_250_434_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9839 236 419 3.40.309.10
af_I6X8S7_263_447_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9803 242 425 3.40.309.10
af_I6X9R9_264_453_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9742 236 425 3.40.309.10
af_Q2FWD6_250_434_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9735 236 419 3.40.309.10
3iwkA02 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9717 234 425 3.40.309.10
ID Description Score Start End GO Terms
AF-A0A1B8R2N5-F1-model_v4 Aldehyde dehydrogenase 0.9867 100 457 GO:0016620
AF-A0A6B3HRB8-F1-model_v4 Aldehyde dehydrogenase family protein 0.9859 111 457 GO:0016620
AF-A0A5K1HJQ9-F1-model_v4 Aldehyde dehydrogenase domain-containing protein 0.9815 123 236 GO:0016491
AF-A0A6B0CS92-F1-model_v4 aldehyde dehydrogenase (NAD(+)) (EC 1.2.1.3) 0.9789 43 397 GO:0016620
AF-A0A1H8V278-F1-model_v4 Aldehyde dehydrogenase family protein 0.9779 287 457 GO:0016620

Map