F325184

General Info

Members Datasets Scaffolds Average Seq Length
214 155 193 778

Family's Representative Sequence

Representative Sequence 3300013102|Ga0157371_10004589|Ga0157371_100045897
Length 863
Sequence MTTTRRQIFENLTLARGRELASLFELNGLSSLSKDALVEALSRERSLEPEKVLCALSRDELTSICEALGLDTSGREKQLLIDRLLRHDAGTRERAAIYAISQEPATGTSPKGMNKKALTEADIRTKFITPALDKDKQGSWDVMTQLLEEHYFTKGRVIVRGQTVHRGEAKKADYILFYKPNIPIAVIEAKDNNHAVGDGMQQALDYAETLDLPFAYSSNGDAFLEHDRTPGADPVEREIHLEQFPSPDELWQRFSASKGYSKQQESITTCDYYDDGSGKQPRYYQINAINRTVDAIARGEDRILLVMATGTGKTYTAFQIIWRLWKSGARKRILFLVDRNILADQTKTNDFKPFGQAMTKITNRTVDKSYEIYLSLYQAVTGTEEASNIYKQFSPNFFDLIIVDECHRGSAAADAAWRQVLEYFASATQIGLTATPKETKDVSNIEYFGEPIYTYSLRQGITDGFLAPYKVVRIGLDKDLDGWRPEAGKLDKYGFEIEDREYNERDMDRNLVLDKRTELVAAKITEFLKATNRYAKTIVFCENIDHAERLRQALVNANPDLAAANSKYVMRITGDNNEGKAQLDNFIDPESTYPVIATTSQLMSTGVDAQTCHLIVLDKRINSMTEFKQIIGRGTRINEDYNKLFFTIMDFKRATALFADPDFDGDPVQIYEPREGDPVVPDDVEVSVAIERVQYLDADGRLITESLTDYTRKTVHKSFATLDDFLTRWNSADQKNALIKELAAQGIFLDELAAQVGADYDAFDLICHVAYDQPPLTRQERADGVKKRDVFGKYGDKARAVLEALLKKYADSGIQTMESMEILNVDPLRDFGTPIEIVQLFGGKAAYRAAIHHLESALYATAA

Samples

Sample ID Description Type Environment
1 2510065053 Pseudomonas sp. MOIL14HWK12:I1 Isolate Rhizosphere
2 2510065058 Pseudomonas oleovorans MOIL14HWK12 Isolate Rhizosphere
3 2599185316 Pseudomonas sp. NFACC52 Isolate Rhizoplane
4 2599185325 Pseudomonas sp. NFACC56-3 Isolate Rhizoplane
5 2600254954 Pseudomonas sp. NFACC19-2 Isolate Rhizoplane
6 2619619299 Pseudomonas veronii R4 Genome sequencing Isolate Unclassified
7 2744054900 Paraburkholderia ginsengiterrae DCY85-1 Isolate Unclassified
8 2744054901 Paraburkholderia ginsengiterrae DCY85 Isolate Unclassified
9 2751185905 Paenibacillus kribbensis 6hRe76 Isolate Unclassified
10 2773857673 Pseudomonas sp. 443 Isolate Unclassified
11 2818991456 Pseudomonas koreensis 3286 Isolate Rhizosphere
12 2842837860 Pseudomonas sp. R-72102 Isolate Unclassified
13 2857558681 Duganella sp. R-74565 Isolate Unclassified
14 2894510363 Methylomonas sp. Kb3 Isolate Unclassified
15 2917832318 Pseudomonas rhizoryzae RY24 Isolate Unclassified
16 2919079590 Herbaspirillum sp. 1173 Isolate Unclassified
17 2919155634 Pseudomonas fulva 1992 Isolate Unclassified
18 2919543075 Aeromonas salmonicida masoucida 4076 Isolate Unclassified
19 2931390751 Pseudomonas sp. DR208 Isolate Rhizosphere
20 3300002155 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7 Metagenome Rhizosphere
21 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
22 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
23 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
24 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
25 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
26 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
27 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
28 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
29 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
30 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
31 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
32 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
38 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
39 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
40 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
41 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
48 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
51 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
52 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
54 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
70 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
71 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
72 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
73 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
74 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
75 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
76 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
77 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
78 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
79 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
80 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
81 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
82 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
83 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
84 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
85 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
86 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
87 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
88 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
89 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
90 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
91 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
92 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
93 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
94 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
95 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
96 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
97 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
98 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
99 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
100 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
101 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
102 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
103 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
104 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
105 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
106 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
107 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
108 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
109 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
110 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
111 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
112 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
113 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
114 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
115 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
116 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
117 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
118 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
119 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
120 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
121 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
122 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
123 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
124 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
125 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
126 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
127 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
128 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
129 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
130 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
131 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
132 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
133 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
134 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
135 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
136 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
137 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
138 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
139 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
140 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
141 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
142 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
143 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
148 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
149 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
150 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
152 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
153 3300053135 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 endosphere Metagenome Endosphere
154 640427133 Stutzerimonas stutzeri A1501 Isolate Rhizosphere
155 651053060 Stutzerimonas stutzeri CMT.A.9 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 90.19
Metatranscriptomes 0
Isolates 9.81

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.8
Nodule 0.47
Rhizoplane 1.4
Rhizosphere 85.51
Stem 0
Stem Tuber 0
Unclassified 9.81

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24033J26618_1000031 3300002155 Bacteria 21578
2 rootH1_10044985 3300003316 Bacteria 13210
3 rootH1_10012113 3300003323 Bacteria 23917
4 Ga0058692_1000014 3300003856 Bacteria 313984
5 Ga0065714_10082852 3300005288 Bacteria 2283
6 Ga0070688_100008534 3300005365 Bacteria 5567
7 Ga0070659_100007172 3300005366 Bacteria 8088
8 Ga0070711_100000913 3300005439 Bacteria 15563
9 Ga0070708_100002377 3300005445 Bacteria 14563
10 Ga0070662_100000375 3300005457 Bacteria 26667
11 Ga0070681_10008316 3300005458 Bacteria 10163
12 Ga0070681_10056269 3300005458 Bacteria 3915
13 Ga0070685_10000001 3300005466 Bacteria 349867
14 Ga0068853_100032547 3300005539 Bacteria 4417
15 Ga0070665_100049314 3300005548 Bacteria 4225
16 Ga0068855_100013758 3300005563 Bacteria 9753
17 Ga0068855_100027200 3300005563 Bacteria 6844
18 Ga0068863_100013871 3300005841 Bacteria 7769
19 Ga0068860_100004365 3300005843 Bacteria 14442
20 Ga0081538_10017930 3300005981 Bacteria 5346
21 Ga0075370_10016358 3300006353 Bacteria 3991
22 Ga0079104_1002329 3300006946 Bacteria 10432
23 Ga0105251_10000154 3300009011 Bacteria 70002
24 Ga0105251_10001703 3300009011 Bacteria 18420
25 Ga0105244_10000946 3300009036 Bacteria 24397
26 Ga0105244_10003544 3300009036 Bacteria 11088
27 Ga0105240_10005416 3300009093 Bacteria 19024
28 Ga0105240_10017555 3300009093 Bacteria 9641
29 Ga0105247_10004439 3300009101 Bacteria 8944
30 Ga0114129_10166308 3300009147 Bacteria 3010
31 Ga0105243_10002361 3300009148 Bacteria 15795
32 Ga0105239_10049910 3300010375 Bacteria 4589
33 Ga0157373_10001361 3300013100 Bacteria 18762
34 Ga0157371_10004589 3300013102 Bacteria 11992
35 Ga0157371_10004732 3300013102 Bacteria 11749
36 Ga0157371_10012703 3300013102 Bacteria 6425
37 Ga0157371_10029329 3300013102 Bacteria 3980
38 Ga0157369_10005721 3300013105 Bacteria 14441
39 Ga0163162_10011907 3300013306 Bacteria 8482
40 Ga0182006_1001234 3300015261 Bacteria 15869
41 Ga0182006_1001308 3300015261 Bacteria 15300
42 Ga0209675_1006606 3300025291 Bacteria 4617
43 Ga0209025_1021124 3300025294 Bacteria 3523
44 Ga0207655_1000275 3300025728 Bacteria 80187
45 Ga0207655_1003820 3300025728 Bacteria 10987
46 Ga0207713_1000217 3300025735 Bacteria 77705
47 Ga0207713_1001502 3300025735 Bacteria 18428
48 Ga0207713_1001522 3300025735 Bacteria 18286
49 Ga0207713_1002765 3300025735 Bacteria 12433
50 Ga0207710_10002526 3300025900 Bacteria 8460
51 Ga0207705_10019255 3300025909 Bacteria 4881
52 Ga0207707_10003267 3300025912 Bacteria 14406
53 Ga0207695_10004449 3300025913 Bacteria 19099
54 Ga0207695_10035017 3300025913 Bacteria 5450
55 Ga0207695_10042214 3300025913 Bacteria 4874
56 Ga0207663_10000633 3300025916 Bacteria 15597
57 Ga0207690_10002552 3300025932 Bacteria 11007
58 Ga0207706_10000056 3300025933 Bacteria 113022
59 Ga0207667_10002166 3300025949 Bacteria 24607
60 Ga0207667_10016587 3300025949 Bacteria 8314
61 Ga0207667_10019890 3300025949 Bacteria 7481
62 Ga0207639_10000003 3300026041 Bacteria 806887
63 Ga0207641_10002138 3300026088 Bacteria 18686
64 Ga0209371_1000040 3300027312 Bacteria 340804
65 Ga0268266_10009604 3300028379 Bacteria 8507
66 Ga0268264_10000009 3300028381 Bacteria 724972
67 Ga0265324_10000053 3300029957 Bacteria 96687
68 Ga0268256_1000041 3300030500 Bacteria 340725
69 Ga0265330_10000441 3300031235 Bacteria 27740
70 Ga0265330_10003202 3300031235 Bacteria 8638
71 Ga0265327_10012470 3300031251 Bacteria 5731
72 Ga0265316_10005069 3300031344 Bacteria 12926
73 Ga0265316_10019914 3300031344 Bacteria 5725
74 Ga0307408_100000018 3300031548 Bacteria 346872
75 Ga0265342_10008021 3300031712 Bacteria 7642
76 Ga0307405_10001552 3300031731 Bacteria 9742
77 Ga0307412_10003762 3300031911 Bacteria 8433
78 Ga0307414_10032351 3300032004 Bacteria 3443
79 Ga0373937_0007072 3300036401 Bacteria 9696
80 Ga0395899_0000003 3300037312 Bacteria 1232684
81 Ga0395899_0041924 3300037312 Bacteria 3418
82 Ga0395900_0002368 3300037418 Bacteria 20831
83 Ga0395898_0081682 3300037466 Bacteria 3116
84 Ga0395901_0066937 3300038443 Bacteria 3741
85 Ga0400490_52437 3300038726 Bacteria 17386
86 Ga0439438_000324 3300041405 Bacteria 21467
87 Ga0439438_001154 3300041405 Bacteria 11727
88 Ga0439447_000059 3300041407 Bacteria 38399
89 Ga0439447_000634 3300041407 Bacteria 13082
90 Ga0439447_001450 3300041407 Bacteria 8708
91 Ga0439466_0001000 3300041411 Bacteria 10876
92 Ga0439463_000728 3300042016 Bacteria 9102
93 Ga0450906_000014 3300042145 Bacteria 34809
94 Ga0451577_0000480 3300042876 Bacteria 68006
95 Ga0453683_0002807 3300044673 Bacteria 13248
96 Ga0453683_0004096 3300044673 Bacteria 10473
97 Ga0453684_0000609 3300044712 Bacteria 131572
98 Ga0453684_0000788 3300044712 Bacteria 108702
99 Ga0453684_0006548 3300044712 Bacteria 22060
100 Ga0453684_0012505 3300044712 Bacteria 13976
101 Ga0453684_0017741 3300044712 Bacteria 10992
102 Ga0453684_0047392 3300044712 Bacteria 5701
103 Ga0453684_0137930 3300044712 Bacteria 2917
104 Ga0453684_0165532 3300044712 Bacteria 2611
105 Ga0466959_0003261 3300045049 Bacteria 10570
106 Ga0451576_0001566 3300045051 Bacteria 38485
107 Ga0451576_0009746 3300045051 Bacteria 11108
108 Ga0451576_0010595 3300045051 Bacteria 10558
109 Ga0451576_0018043 3300045051 Bacteria 7744
110 Ga0495627_000378 3300046453 Bacteria 40927
111 Ga0495592_0007716 3300046454 Bacteria 8057
112 Ga0495591_000168 3300046458 Bacteria 69107
113 Ga0495638_0001375 3300046460 Bacteria 22266
114 Ga0495638_0058836 3300046460 Bacteria 2381
115 Ga0495653_0008283 3300046463 Bacteria 8523
116 Ga0495580_0008100 3300046472 Bacteria 8383
117 Ga0495584_0000272 3300046491 Bacteria 36607
118 Ga0495584_0001126 3300046491 Bacteria 16567
119 Ga0495584_0001328 3300046491 Bacteria 15009
120 Ga0495585_0000296 3300046492 Bacteria 50102
121 Ga0495596_0002117 3300046500 Bacteria 10865
122 Ga0495596_0002119 3300046500 Bacteria 10859
123 Ga0495607_0002279 3300046501 Bacteria 15799
124 Ga0495583_0007751 3300046506 Bacteria 6679
125 Ga0495610_0002364 3300046512 Bacteria 15939
126 Ga0495610_0030763 3300046512 Bacteria 2808
127 Ga0495616_0016106 3300046513 Bacteria 4143
128 Ga0495616_0032385 3300046513 Bacteria 2731
129 Ga0495620_0001808 3300046515 Bacteria 12580
130 Ga0495632_0002038 3300046519 Bacteria 15902
131 Ga0495637_0006439 3300046520 Bacteria 5892
132 Ga0495648_0001507 3300046524 Bacteria 22797
133 Ga0495648_0005307 3300046524 Bacteria 10750
134 Ga0495654_0000248 3300046530 Bacteria 49843
135 Ga0495654_0012881 3300046530 Bacteria 4483
136 Ga0495609_0000065 3300046538 Bacteria 132230
137 Ga0495609_0003136 3300046538 Bacteria 9648
138 Ga0495609_0006700 3300046538 Bacteria 5842
139 Ga0495597_0001214 3300046542 Bacteria 19199
140 Ga0495622_0000564 3300046557 Bacteria 22265
141 Ga0495622_0002532 3300046557 Bacteria 8826
142 Ga0495633_0001037 3300046558 Bacteria 22750
143 Ga0495668_0000371 3300046616 Bacteria 59412
144 Ga0495611_0000550 3300046648 Bacteria 21897
145 Ga0495611_0001175 3300046648 Bacteria 13635
146 Ga0495670_0000534 3300046691 Bacteria 18059
147 Ga0495671_0001199 3300046692 Bacteria 17742
148 Ga0495649_0015315 3300046694 Bacteria 4366
149 Ga0495660_0000523 3300046810 Bacteria 31375
150 Ga0495660_0001729 3300046810 Bacteria 14584
151 Ga0495660_0046276 3300046810 Bacteria 2386
152 Ga0495604_0007743 3300047317 Bacteria 8509
153 Ga0495672_0001401 3300047320 Bacteria 23720
154 Ga0495672_0004608 3300047320 Bacteria 11194
155 Ga0495680_0003155 3300047322 Bacteria 16416
156 Ga0495680_0010076 3300047322 Bacteria 8450
157 Ga0495683_0000125 3300047323 Bacteria 76538
158 Ga0495683_0001460 3300047323 Bacteria 15486
159 Ga0495683_0004888 3300047323 Bacteria 7507
160 Ga0495687_003794 3300047443 Bacteria 10667
161 Ga0495687_008235 3300047443 Bacteria 6001
162 Ga0495675_0025912 3300047444 Bacteria 3737
163 Ga0495677_0000200 3300047445 Bacteria 27570
164 Ga0495685_000289 3300047447 Bacteria 16782
165 Ga0495673_0000629 3300047469 Bacteria 34725
166 Ga0495673_0012471 3300047469 Bacteria 4504
167 Ga0495681_0001018 3300047470 Bacteria 21429
168 Ga0495681_0003271 3300047470 Bacteria 11296
169 Ga0495593_0004347 3300047673 Bacteria 8431
170 Ga0495626_0000924 3300048091 Bacteria 25748
171 Ga0496116_0031145 3300048919 Bacteria 3824
172 Ga0496117_0005607 3300048920 Bacteria 13108
173 Ga0496119_0013980 3300048922 Bacteria 6327
174 Ga0496121_0003257 3300048924 Bacteria 23340
175 Ga0496124_0005314 3300048927 Bacteria 14554
176 Ga0496126_0000674 3300048929 Bacteria 63031
177 Ga0495678_000865 3300049459 Bacteria 26950
178 Ga0495682_0000503 3300049460 Bacteria 27019
179 Ga0495682_0002309 3300049460 Bacteria 9087
180 Ga0501032_0003325 3300049569 Bacteria 12365
181 Ga0501032_0022015 3300049569 Bacteria 4425
182 Ga0501036_0005490 3300049572 Bacteria 10284
183 Ga0501038_0001926 3300049574 Bacteria 19162
184 Ga0501043_0008014 3300049579 Bacteria 8338
185 Ga0501070_0007440 3300049586 Bacteria 9302
186 Ga0501257_000259 3300049686 Bacteria 10361
187 Ga0501280_000106 3300049776 Bacteria 21851
188 Ga0501035_0002822 3300049822 Bacteria 16802
189 Ga0501044_0003217 3300049823 Bacteria 18405
190 Ga0501044_0003672 3300049823 Bacteria 17257
191 nmdc:mga07m45_3273_c1 3300050496 Bacteria 7788
192 nmdc:mga07m45_4984_c1 3300050496 Bacteria 6558
193 Ga0500659_0000596 3300053135 Bacteria 23583

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300005288 Ga0065714_10082852 Ga0065714_100828522 612
2 3300037312 Ga0395899_0000003 Ga0395899_0000003_743923_746256 683
3 3300044712 Ga0453684_0006548 Ga0453684_0006548_14065_16374 720
4 3300046472 Ga0495580_0008100 Ga0495580_0008100_13_2244 726
5 3300037418 Ga0395900_0002368 Ga0395900_0002368_5528_7783 730
6 3300037466 Ga0395898_0081682 Ga0395898_0081682_209_2464 730
7 3300046512 Ga0495610_0030763 Ga0495610_0030763_497_2791 731
8 3300013100 Ga0157373_10001361 Ga0157373_100013613 737
9 3300044712 Ga0453684_0012505 Ga0453684_0012505_6045_8411 741
10 3300045051 Ga0451576_0018043 Ga0451576_0018043_4011_6356 743
11 iso_pu_bacteria 2619619299 2621297447 743
12 iso_pu_bacteria 2773857673 2774138224 743
13 3300037312 Ga0395899_0041924 Ga0395899_0041924_487_2847 744
14 3300046460 Ga0495638_0058836 Ga0495638_0058836_63_2348 746
15 3300046500 Ga0495596_0002117 Ga0495596_0002117_1296_3581 746
16 3300046512 Ga0495610_0002364 Ga0495610_0002364_7281_9566 746
17 3300046519 Ga0495632_0002038 Ga0495632_0002038_6340_8625 746
18 3300046810 Ga0495660_0046276 Ga0495660_0046276_62_2347 746
19 3300047469 Ga0495673_0012471 Ga0495673_0012471_427_2712 746
20 3300025291 Ga0209675_1006606 Ga0209675_10066062 747
21 3300031548 Ga0307408_100000018 Ga0307408_100000018276 747
22 3300041411 Ga0439466_0001000 Ga0439466_0001000_4404_6692 747
23 3300046460 Ga0495638_0001375 Ga0495638_0001375_17422_19710 747
24 3300046500 Ga0495596_0002119 Ga0495596_0002119_8206_10587 747
25 3300046530 Ga0495654_0012881 Ga0495654_0012881_1016_3304 747
26 3300046648 Ga0495611_0000550 Ga0495611_0000550_10387_12768 747
27 3300046694 Ga0495649_0015315 Ga0495649_0015315_870_3158 747
28 3300047320 Ga0495672_0001401 Ga0495672_0001401_3807_6095 747
29 3300048920 Ga0496117_0005607 Ga0496117_0005607_2722_5010 747
30 3300048924 Ga0496121_0003257 Ga0496121_0003257_15028_17316 747
31 3300029957 Ga0265324_10000053 Ga0265324_1000005350 748
32 3300031251 Ga0265327_10012470 Ga0265327_100124703 749
33 3300044673 Ga0453683_0002807 Ga0453683_0002807_6295_8652 750
34 3300046524 Ga0495648_0005307 Ga0495648_0005307_4531_6897 750
35 3300046530 Ga0495654_0000248 Ga0495654_0000248_30986_33352 750
36 3300013102 Ga0157371_10004589 Ga0157371_100045897 751
37 3300046491 Ga0495584_0000272 Ga0495584_0000272_24725_27136 751
38 3300046492 Ga0495585_0000296 Ga0495585_0000296_37291_39702 751
39 3300046538 Ga0495609_0006700 Ga0495609_0006700_1918_4329 751
40 3300046558 Ga0495633_0001037 Ga0495633_0001037_9862_12273 751
41 3300047323 Ga0495683_0000125 Ga0495683_0000125_36884_39295 751
42 3300046648 Ga0495611_0001175 Ga0495611_0001175_6025_8391 752
43 3300047320 Ga0495672_0004608 Ga0495672_0004608_7580_9946 752
44 3300031712 Ga0265342_10008021 Ga0265342_100080216 753
45 3300046513 Ga0495616_0016106 Ga0495616_0016106_1239_3605 753
46 3300046691 Ga0495670_0000534 Ga0495670_0000534_9854_12220 753
47 3300025909 Ga0207705_10019255 Ga0207705_100192554 755
48 3300003316 rootH1_10044985 rootH1_100449857 756
49 3300046542 Ga0495597_0001214 Ga0495597_0001214_11564_13930 756
50 3300049686 Ga0501257_000259 Ga0501257_000259_2307_4643 756
51 3300047445 Ga0495677_0000200 Ga0495677_0000200_19799_22165 757
52 3300005365 Ga0070688_100008534 Ga0070688_1000085342 758
53 3300005466 Ga0070685_10000001 Ga0070685_10000001283 758
54 3300005548 Ga0070665_100049314 Ga0070665_1000493142 758
55 3300005841 Ga0068863_100013871 Ga0068863_1000138713 758
56 3300005843 Ga0068860_100004365 Ga0068860_1000043657 758
57 3300009036 Ga0105244_10003544 Ga0105244_100035442 758
58 3300009101 Ga0105247_10004439 Ga0105247_100044394 758
59 3300025728 Ga0207655_1003820 Ga0207655_10038205 758
60 3300025900 Ga0207710_10002526 Ga0207710_100025264 758
61 3300026088 Ga0207641_10002138 Ga0207641_100021385 758
62 3300028379 Ga0268266_10009604 Ga0268266_100096044 758
63 3300028381 Ga0268264_10000009 Ga0268264_1000000947 758
64 3300036401 Ga0373937_0007072 Ga0373937_0007072_633_3002 759
65 3300046616 Ga0495668_0000371 Ga0495668_0000371_4276_6654 759
66 3300005458 Ga0070681_10008316 Ga0070681_100083169 760
67 3300005563 Ga0068855_100027200 Ga0068855_1000272003 760
68 3300006353 Ga0075370_10016358 Ga0075370_100163583 760
69 3300013306 Ga0163162_10011907 Ga0163162_100119074 760
70 3300025735 Ga0207713_1002765 Ga0207713_100276511 760
71 3300025912 Ga0207707_10003267 Ga0207707_100032674 760
72 3300025949 Ga0207667_10016587 Ga0207667_100165874 760
73 3300050496 nmdc:mga07m45_4984_c1 nmdc:mga07m45_4984_c1_2063_4423 760
74 3300003856 Ga0058692_1000014 Ga0058692_1000014244 761
75 3300009147 Ga0114129_10166308 Ga0114129_101663081 761
76 3300027312 Ga0209371_1000040 Ga0209371_100004046 761
77 3300030500 Ga0268256_1000041 Ga0268256_1000041269 761
78 3300038443 Ga0395901_0066937 Ga0395901_0066937_460_2835 761
79 3300005366 Ga0070659_100007172 Ga0070659_1000071722 762
80 3300005563 Ga0068855_100013758 Ga0068855_1000137585 762
81 3300010375 Ga0105239_10049910 Ga0105239_100499102 762
82 3300025932 Ga0207690_10002552 Ga0207690_100025524 762
83 3300025949 Ga0207667_10019890 Ga0207667_100198902 762
84 3300045049 Ga0466959_0003261 Ga0466959_0003261_2031_4376 762
85 3300032004 Ga0307414_10032351 Ga0307414_100323512 763
86 3300038726 Ga0400490_52437 Ga0400490_52437_3741_6125 763
87 3300041407 Ga0439447_000634 Ga0439447_000634_7271_9637 763
88 3300046454 Ga0495592_0007716 Ga0495592_0007716_1821_4187 763
89 3300046463 Ga0495653_0008283 Ga0495653_0008283_1859_4225 763
90 3300047317 Ga0495604_0007743 Ga0495604_0007743_4299_6665 763
91 3300025294 Ga0209025_1021124 Ga0209025_10211242 764
92 3300044712 Ga0453684_0165532 Ga0453684_0165532_187_2517 764
93 3300045051 Ga0451576_0010595 Ga0451576_0010595_7214_9595 764
94 3300049569 Ga0501032_0022015 Ga0501032_0022015_67_2511 764
95 3300013102 Ga0157371_10012703 Ga0157371_100127031 765
96 3300031731 Ga0307405_10001552 Ga0307405_100015523 765
97 3300046501 Ga0495607_0002279 Ga0495607_0002279_4499_6865 765
98 3300005439 Ga0070711_100000913 Ga0070711_1000009139 766
99 3300013102 Ga0157371_10029329 Ga0157371_100293292 766
100 3300025916 Ga0207663_10000633 Ga0207663_100006338 766
101 3300047469 Ga0495673_0000629 Ga0495673_0000629_23132_25492 766
102 3300047470 Ga0495681_0001018 Ga0495681_0001018_13382_15742 766
103 iso_pu_bacteria 2751185905 2753812775 766
104 3300005539 Ga0068853_100032547 Ga0068853_1000325472 767
105 3300009011 Ga0105251_10001703 Ga0105251_100017034 767
106 3300009093 Ga0105240_10017555 Ga0105240_100175553 767
107 3300025735 Ga0207713_1001502 Ga0207713_10015024 767
108 3300026041 Ga0207639_10000003 Ga0207639_10000003520 767
109 3300046506 Ga0495583_0007751 Ga0495583_0007751_1846_4200 767
110 3300047443 Ga0495687_008235 Ga0495687_008235_2475_4829 767
111 3300049460 Ga0495682_0002309 Ga0495682_0002309_655_3009 767
112 3300048919 Ga0496116_0031145 Ga0496116_0031145_65_2497 768
113 iso_pu_bacteria 2510065053 2510281022 768
114 iso_pu_bacteria 2510065058 2510309170 768
115 iso_pu_bacteria 2600254954 2600445048 768
116 iso_pu_bacteria 2917832318 2917834990 768
117 iso_pu_bacteria 651053060 651175356 768
118 iso_pu_bacteria 2599185316 2600023794 769
119 iso_pu_bacteria 2599185325 2600077844 769
120 iso_pu_bacteria 2818991456 2819658089 769
121 iso_pu_bacteria 2842837860 2842840358 769
122 iso_pu_bacteria 2931390751 2931395862 769
123 3300005981 Ga0081538_10017930 Ga0081538_100179302 770
124 3300047322 Ga0495680_0010076 Ga0495680_0010076_4235_6601 770
125 3300047673 Ga0495593_0004347 Ga0495593_0004347_4235_6601 770
126 3300049776 Ga0501280_000106 Ga0501280_000106_10062_12434 770
127 iso_pu_bacteria 2894510363 2894512824 770
128 iso_pu_bacteria 2919155634 2919160129 770
129 3300044673 Ga0453683_0004096 Ga0453683_0004096_1112_3481 771
130 3300044712 Ga0453684_0017741 Ga0453684_0017741_7758_10142 771
131 3300045051 Ga0451576_0009746 Ga0451576_0009746_7753_10137 771
132 3300049569 Ga0501032_0003325 Ga0501032_0003325_8242_10704 771
133 iso_pu_bacteria 2744054900 2746086680 771
134 iso_pu_bacteria 2744054901 2746094079 771
135 3300003323 rootH1_10012113 rootH1_100121133 772
136 3300015261 Ga0182006_1001234 Ga0182006_10012347 772
137 3300025735 Ga0207713_1001522 Ga0207713_100152215 772
138 3300041407 Ga0439447_000059 Ga0439447_000059_27081_29444 772
139 3300046491 Ga0495584_0001126 Ga0495584_0001126_2533_4941 772
140 3300046513 Ga0495616_0032385 Ga0495616_0032385_243_2606 772
141 3300046692 Ga0495671_0001199 Ga0495671_0001199_9247_11610 772
142 3300046810 Ga0495660_0000523 Ga0495660_0000523_5552_7906 772
143 3300048091 Ga0495626_0000924 Ga0495626_0000924_5368_7722 772
144 3300049460 Ga0495682_0000503 Ga0495682_0000503_7225_9588 772
145 iso_pu_bacteria 2919543075 2919547191 772
146 iso_pu_bacteria 640427133 640487424 772
147 3300005457 Ga0070662_100000375 Ga0070662_1000003757 773
148 3300006946 Ga0079104_1002329 Ga0079104_10023294 773
149 3300009011 Ga0105251_10000154 Ga0105251_1000015413 773
150 3300009148 Ga0105243_10002361 Ga0105243_100023614 773
151 3300013105 Ga0157369_10005721 Ga0157369_100057215 773
152 3300015261 Ga0182006_1001308 Ga0182006_10013083 773
153 3300025735 Ga0207713_1000217 Ga0207713_100021720 773
154 3300025933 Ga0207706_10000056 Ga0207706_1000005616 773
155 3300031911 Ga0307412_10003762 Ga0307412_100037623 773
156 3300041405 Ga0439438_000324 Ga0439438_000324_15169_17535 773
157 3300041405 Ga0439438_001154 Ga0439438_001154_3011_5377 773
158 3300041407 Ga0439447_001450 Ga0439447_001450_4446_6812 773
159 3300042016 Ga0439463_000728 Ga0439463_000728_2561_4927 773
160 3300042145 Ga0450906_000014 Ga0450906_000014_21825_24191 773
161 3300044712 Ga0453684_0000609 Ga0453684_0000609_27737_30124 773
162 3300046458 Ga0495591_000168 Ga0495591_000168_44972_47338 773
163 3300046491 Ga0495584_0001328 Ga0495584_0001328_10913_13279 773
164 3300046515 Ga0495620_0001808 Ga0495620_0001808_5449_7815 773
165 3300046520 Ga0495637_0006439 Ga0495637_0006439_117_2483 773
166 3300046557 Ga0495622_0000564 Ga0495622_0000564_8522_10888 773
167 3300046557 Ga0495622_0002532 Ga0495622_0002532_2307_4673 773
168 3300046810 Ga0495660_0001729 Ga0495660_0001729_10578_12944 773
169 3300047322 Ga0495680_0003155 Ga0495680_0003155_4212_6578 773
170 3300047323 Ga0495683_0001460 Ga0495683_0001460_4164_6530 773
171 3300047323 Ga0495683_0004888 Ga0495683_0004888_4574_6970 773
172 3300047443 Ga0495687_003794 Ga0495687_003794_6625_9006 773
173 3300047444 Ga0495675_0025912 Ga0495675_0025912_85_2451 773
174 3300047470 Ga0495681_0003271 Ga0495681_0003271_5146_7512 773
175 3300048922 Ga0496119_0013980 Ga0496119_0013980_3336_5852 773
176 3300048929 Ga0496126_0000674 Ga0496126_0000674_2090_4456 773
177 3300049459 Ga0495678_000865 Ga0495678_000865_12044_14410 773
178 3300053135 Ga0500659_0000596 Ga0500659_0000596_14530_16896 773
179 3300042876 Ga0451577_0000480 Ga0451577_0000480_2233_4638 774
180 3300044712 Ga0453684_0000788 Ga0453684_0000788_80289_82694 774
181 3300045051 Ga0451576_0001566 Ga0451576_0001566_15700_18111 774
182 3300046538 Ga0495609_0003136 Ga0495609_0003136_2012_4393 774
183 iso_pu_bacteria 2857558681 2857563147 774
184 iso_pu_bacteria 2919079590 2919084892 774
185 3300009036 Ga0105244_10000946 Ga0105244_100009465 775
186 3300025728 Ga0207655_1000275 Ga0207655_100027518 775
187 3300046538 Ga0495609_0000065 Ga0495609_0000065_113661_116015 775
188 3300049572 Ga0501036_0005490 Ga0501036_0005490_7430_9805 775
189 3300049574 Ga0501038_0001926 Ga0501038_0001926_9208_11583 775
190 3300049579 Ga0501043_0008014 Ga0501043_0008014_2154_4529 775
191 3300049586 Ga0501070_0007440 Ga0501070_0007440_5930_8296 775
192 3300049822 Ga0501035_0002822 Ga0501035_0002822_4232_6607 775
193 3300049823 Ga0501044_0003217 Ga0501044_0003217_8702_11077 775
194 3300046524 Ga0495648_0001507 Ga0495648_0001507_3297_5684 776
195 3300047447 Ga0495685_000289 Ga0495685_000289_2457_4838 776
196 3300031344 Ga0265316_10005069 Ga0265316_100050699 777
197 3300046453 Ga0495627_000378 Ga0495627_000378_15473_17854 777
198 3300049823 Ga0501044_0003672 Ga0501044_0003672_12392_14776 777
199 3300009093 Ga0105240_10005416 Ga0105240_1000541615 778
200 3300025913 Ga0207695_10004449 Ga0207695_100044493 778
201 3300025913 Ga0207695_10042214 Ga0207695_100422143 778
202 3300025949 Ga0207667_10002166 Ga0207667_1000216612 778
203 3300031235 Ga0265330_10000441 Ga0265330_1000044124 778
204 3300044712 Ga0453684_0047392 Ga0453684_0047392_1901_4273 778
205 3300048927 Ga0496124_0005314 Ga0496124_0005314_6611_9007 778
206 3300013102 Ga0157371_10004732 Ga0157371_100047328 779
207 3300031235 Ga0265330_10003202 Ga0265330_100032024 779
208 3300031344 Ga0265316_10019914 Ga0265316_100199142 779
209 3300050496 nmdc:mga07m45_3273_c1 nmdc:mga07m45_3273_c1_4471_6834 779
210 3300005458 Ga0070681_10056269 Ga0070681_100562693 780
211 3300025913 Ga0207695_10035017 Ga0207695_100350173 780
212 3300044712 Ga0453684_0137930 Ga0453684_0137930_230_2617 780
213 3300002155 JGI24033J26618_1000031 JGI24033J26618_100003112 787
214 3300005445 Ga0070708_100002377 Ga0070708_10000237710 787

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04851

ResIII

Type III restriction enzyme, res subunit

278

438

0.95

PF08463

EcoEI_R_C

EcoEI R protein C-terminal

705

859

0.95

PF02037

SAP

SAP domain

55

89

0.9

PF18766

SWI2_SNF2

SWI2/SNF2 ATPase

284

505

0.83

PF00271

Helicase_C

Helicase conserved C-terminal domain

520

638

0.8

PF00270

DEAD

DEAD/DEAH box helicase

283

442

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
3h1t-assembly1.cif.gz_A the fragment structure of a putative hsdr subunit of a type i restriction enzyme from vibrio vulnificus yj016 0.9041 6 560
3h1t-assembly1.cif.gz_A the fragment structure of a putative hsdr subunit of a type i restriction enzyme from vibrio vulnificus yj016 0.8788 6 560
4crw-assembly1.cif.gz_B complex of human ddx6 (reca-c) and cnot1 (mif4g) 0.7474 402 539
5jxt-assembly1.cif.gz_K crystal structure of mtiswi bound with histone h4 tail 0.7461 405 539
5jxt-assembly1.cif.gz_M crystal structure of mtiswi bound with histone h4 tail 0.742 405 539
ID Description Score Start End Superfamily
3h1tA03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9101 343 560 3.40.50.300
3h1tA01 Alpha Beta;Alpha-Beta Complex;tt1808, chain A; 0.9013 5 145 3.90.1570.30
3h1tA01 Alpha Beta;Alpha-Beta Complex;tt1808, chain A; 0.8824 5 145 3.90.1570.30
3h1tA03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8623 343 560 3.40.50.300
af_K7KW92_703_884_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8478 405 538 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A1Z4RDK6-F1-model_v4 EcoEI R protein C-terminal domain-containing protein 0.9863 631 784 GO:0003677
GO:0003824
GO:0006304
AF-A0A355GPB2-F1-model_v4 Restriction endonuclease 0.9835 639 784 GO:0003677
GO:0004519
GO:0006304
AF-A0A4Q3MKN2-F1-model_v4 Restriction endonuclease 0.9795 629 783 GO:0003677
GO:0004519
GO:0006304
AF-A0A7Y2MKA8-F1-model_v4 DEAD/DEAH box helicase family protein 0.9778 1 216 GO:0003677
GO:0004386
GO:0005524
GO:0005829
GO:0016787
AF-A0A356WYY5-F1-model_v4 Restriction endonuclease 0.9765 638 784 GO:0003677
GO:0004519
GO:0006304

Feature Viewer

pLDDT pTM Quality
80.33 0.67 Medium
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Predicted Structure (AlphaFold2)

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