F324912

General Info

Members Datasets Scaffolds Average Seq Length
214 163 428 172

Family's Representative Sequence

Representative Sequence 3300005437|Ga0070710_10003740|Ga0070710_100037405
Length 196
Sequence LLSYDVPMDAPQEPRWLNAEESQAWRALASALVRLPAALDAQLRREAGISHFEYQVLALLSEAPGRTLRMSALATLAGGSLPRLSQVVARLEQRGWVRRTPDPADGRYTLATLTGQGQAKVTQAAPGHVQEVRRLVLDPLTKAQSRQLREISRRITRAIDPDERRPDNQPLPPRPRRCPDDRHPQPCACRESRPWL

Samples

Sample ID Description Type Environment
1 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
15 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
23 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
24 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
31 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
35 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
36 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
37 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
38 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
41 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
42 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
45 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
53 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
54 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
55 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
56 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
57 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
60 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
61 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
62 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
92 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
93 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
94 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
95 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
96 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
97 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
98 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
99 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
100 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
101 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
102 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
103 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
104 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
105 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
106 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
107 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
108 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
109 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
110 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
111 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
112 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
113 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
114 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
115 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
116 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
117 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
118 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
119 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
120 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
121 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
122 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
123 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
124 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
125 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
126 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
127 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
128 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
129 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
130 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
131 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
132 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
133 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
134 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
135 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
136 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
137 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
138 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
139 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
140 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
141 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
142 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
143 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
144 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
145 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
146 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
147 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
148 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
149 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
150 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
151 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
152 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
153 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
154 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
155 2508501039 Frankia saprophytica CN3 Isolate Nodule
156 2517572101 Frankia sp. DC12 Isolate Nodule
157 2622736605 Geodermatophilus ruber DSM 45317 Isolate Rhizosphere
158 2684623035 Frankia sp. NRRL B-16219 Isolate Rhizosphere
159 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
160 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
161 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
162 8002775197 Frankia nepalensis CN7 Isolate Nodule
163 8002784119 Frankia sp. AgB1.9 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 95.33
Metatranscriptomes 0
Isolates 4.67

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.93
Nodule 2.34
Rhizoplane 6.54
Rhizosphere 79.91
Stem 0
Stem Tuber 0
Unclassified 0.47

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070710_10003740 3300005437 Bacteria 7191
2 JGI25406J46586_10000968 3300003203 Bacteria 13503
3 rootH1_10057115 3300003316 Bacteria 2771
4 rootL2_10215919 3300003322 Bacteria 1083
5 Ga0068868_101570167 3300005338 Bacteria 618
6 Ga0070691_10048309 3300005341 Bacteria 2025
7 Ga0070671_100247180 3300005355 Bacteria 1515
8 Ga0070674_100206813 3300005356 Bacteria 1519
9 Ga0070659_100264396 3300005366 Bacteria 1428
10 Ga0070709_10009039 3300005434 Bacteria 5488
11 Ga0070714_100061302 3300005435 Bacteria 3230
12 Ga0070713_100028829 3300005436 Bacteria 4387
13 Ga0070713_100181513 3300005436 Bacteria 1891
14 Ga0070713_100269975 3300005436 Bacteria 1557
15 Ga0070710_10058003 3300005437 Bacteria 2195
16 Ga0070710_10149713 3300005437 Bacteria 1438
17 Ga0070711_100020709 3300005439 Bacteria 4242
18 Ga0070711_100379667 3300005439 Bacteria 1142
19 Ga0070705_100690062 3300005440 Bacteria 801
20 Ga0070685_10460694 3300005466 Bacteria 892
21 Ga0070707_100055821 3300005468 Bacteria 3786
22 Ga0070698_100005404 3300005471 Bacteria 13959
23 Ga0070698_100037672 3300005471 Bacteria 4985
24 Ga0070698_100581786 3300005471 Bacteria 1060
25 Ga0070699_100044987 3300005518 Bacteria 3820
26 Ga0070679_101076254 3300005530 Bacteria 749
27 Ga0070697_100091354 3300005536 Bacteria 2517
28 Ga0068853_100584048 3300005539 Bacteria 1060
29 Ga0070686_100968134 3300005544 Bacteria 696
30 Ga0070695_100239478 3300005545 Bacteria 1316
31 Ga0070693_100150265 3300005547 Bacteria 1475
32 Ga0070665_100184619 3300005548 Bacteria 2086
33 Ga0068855_100193527 3300005563 Bacteria 2292
34 Ga0070664_100159323 3300005564 Bacteria 1996
35 Ga0068857_100372607 3300005577 Bacteria 1325
36 Ga0068859_100620957 3300005617 Bacteria 1174
37 Ga0068864_100411386 3300005618 Bacteria 1287
38 Ga0068870_10646128 3300005840 Bacteria 724
39 Ga0068858_100187956 3300005842 Bacteria 1951
40 Ga0068862_100013121 3300005844 Bacteria 6853
41 Ga0081539_10001038 3300005985 Bacteria 51162
42 Ga0081539_10043068 3300005985 Bacteria 2621
43 Ga0070717_10015830 3300006028 Bacteria 5831
44 Ga0070715_10064138 3300006163 Bacteria 1622
45 Ga0070715_10180719 3300006163 Bacteria 1058
46 Ga0070716_100009485 3300006173 Bacteria 4853
47 Ga0070716_100021010 3300006173 Bacteria 3434
48 Ga0070712_100018456 3300006175 Bacteria 4532
49 Ga0070712_100128913 3300006175 Bacteria 1915
50 Ga0070712_100436188 3300006175 Bacteria 1088
51 Ga0068871_101752844 3300006358 Bacteria 589
52 Ga0075430_100130543 3300006846 Bacteria 2094
53 Ga0075431_100960970 3300006847 Bacteria 822
54 Ga0075434_100619000 3300006871 Bacteria 1101
55 Ga0097620_100620944 3300006931 Bacteria 1174
56 Ga0099795_10089018 3300007788 Bacteria 1194
57 Ga0105251_10166642 3300009011 Bacteria 993
58 Ga0105240_11065258 3300009093 Bacteria 862
59 Ga0105245_10073633 3300009098 Bacteria 3107
60 Ga0105247_10000056 3300009101 Bacteria 133965
61 Ga0105247_10139517 3300009101 Bacteria 1587
62 Ga0114129_10400908 3300009147 Bacteria 1808
63 Ga0105248_10012682 3300009177 Bacteria 9300
64 Ga0105237_10270071 3300009545 Bacteria 1704
65 Ga0105239_10221962 3300010375 Bacteria 2119
66 Ga0105246_10177175 3300011119 Bacteria 1638
67 Ga0157370_10148718 3300013104 Bacteria 2180
68 Ga0157374_11059515 3300013296 Bacteria 831
69 Ga0157378_10381774 3300013297 Bacteria 1384
70 Ga0157372_10279373 3300013307 Bacteria 1941
71 Ga0157375_10149291 3300013308 Bacteria 2471
72 Ga0157379_10058535 3300014968 Bacteria 3445
73 Ga0157379_10174456 3300014968 Bacteria 1941
74 Ga0157376_10048963 3300014969 Bacteria 3499
75 Ga0213875_10022577 3300021388 Bacteria 3009
76 Ga0213875_10129359 3300021388 Bacteria 1181
77 Ga0207713_1100125 3300025735 Bacteria 1002
78 Ga0207692_10000879 3300025898 Bacteria 10859
79 Ga0207692_10003625 3300025898 Bacteria 6044
80 Ga0207692_10149465 3300025898 Bacteria 1336
81 Ga0207710_10000084 3300025900 Bacteria 133802
82 Ga0207680_10756171 3300025903 Bacteria 697
83 Ga0207685_10085626 3300025905 Bacteria 1315
84 Ga0207699_10027761 3300025906 Bacteria 3138
85 Ga0207699_10069583 3300025906 Bacteria 2146
86 Ga0207699_10082980 3300025906 Bacteria 1992
87 Ga0207707_10543377 3300025912 Bacteria 988
88 Ga0207671_10454867 3300025914 Bacteria 1020
89 Ga0207693_10116167 3300025915 Bacteria 2101
90 Ga0207693_10129437 3300025915 Bacteria 1984
91 Ga0207663_10165846 3300025916 Bacteria 1564
92 Ga0207663_10956892 3300025916 Bacteria 686
93 Ga0207646_10005545 3300025922 Bacteria 13257
94 Ga0207646_10120338 3300025922 Bacteria 2359
95 Ga0207646_10621969 3300025922 Bacteria 969
96 Ga0207650_11072921 3300025925 Bacteria 685
97 Ga0207700_10003890 3300025928 Bacteria 8720
98 Ga0207700_10011562 3300025928 Bacteria 5635
99 Ga0207700_10237484 3300025928 Bacteria 1552
100 Ga0207664_10080919 3300025929 Bacteria 2642
101 Ga0207664_10133213 3300025929 Bacteria 2094
102 Ga0207664_10361277 3300025929 Bacteria 1286
103 Ga0207664_10452489 3300025929 Bacteria 1146
104 Ga0207644_10652928 3300025931 Bacteria 876
105 Ga0207665_10023600 3300025939 Bacteria 4050
106 Ga0207665_10030868 3300025939 Bacteria 3544
107 Ga0207665_10105079 3300025939 Bacteria 1977
108 Ga0207711_10007154 3300025941 Bacteria 9353
109 Ga0207679_10282760 3300025945 Bacteria 1423
110 Ga0207679_10510127 3300025945 Bacteria 1074
111 Ga0207667_10248559 3300025949 Bacteria 1819
112 Ga0207668_11284308 3300025972 Bacteria 659
113 Ga0207640_11303262 3300025981 Bacteria 648
114 Ga0207658_10043117 3300025986 Bacteria 3278
115 Ga0207658_10539475 3300025986 Bacteria 1043
116 Ga0207677_10393867 3300026023 Bacteria 1173
117 Ga0207639_10513590 3300026041 Bacteria 1096
118 Ga0207702_10523052 3300026078 Bacteria 1158
119 Ga0207674_10347523 3300026116 Bacteria 1434
120 Ga0207675_100683923 3300026118 Bacteria 1034
121 Ga0207698_11466705 3300026142 Bacteria 697
122 Ga0209179_1109142 3300027512 Bacteria 617
123 Ga0307515_10169728 3300028794 Bacteria 2181
124 Ga0307515_10584563 3300028794 Bacteria 727
125 Ga0307511_10024474 3300030521 Bacteria 5595
126 Ga0307512_10048887 3300030522 Bacteria 3418
127 Ga0307513_10028267 3300031456 Bacteria 6415
128 Ga0307513_10417933 3300031456 Bacteria 1072
129 Ga0307508_10075359 3300031616 Bacteria 2951
130 Ga0307508_10196357 3300031616 Bacteria 1619
131 Ga0307514_10202231 3300031649 Bacteria 1246
132 Ga0307516_10066338 3300031730 Bacteria 3481
133 Ga0307516_10080204 3300031730 Bacteria 3107
134 Ga0373959_0039800 3300034820 Bacteria 982
135 Ga0373949_0055123 3300035090 Bacteria 1011
136 Ga0373923_0105705 3300035111 Bacteria 1246
137 Ga0373945_0029362 3300035116 Bacteria 1932
138 Ga0373961_0061995 3300035241 Bacteria 1138
139 Ga0373962_0000412 3300035242 Bacteria 9362
140 Ga0373935_0523600 3300035692 Bacteria 862
141 Ga0373935_0686376 3300035692 Bacteria 753
142 Ga0373935_1014302 3300035692 Bacteria 617
143 Ga0373927_0110697 3300035695 Bacteria 1789
144 Ga0373947_0149014 3300035725 Bacteria 1506
145 Ga0373925_0000168 3300037068 Bacteria 70746
146 Ga0373925_0001610 3300037068 Bacteria 19052
147 Ga0373925_0072111 3300037068 Bacteria 2613
148 Ga0373925_0542395 3300037068 Bacteria 956
149 Ga0451806_556004 3300041462 Bacteria 990
150 Ga0466966_0289107 3300044684 Bacteria 985
151 Ga0495653_0107269 3300046463 Bacteria 2013
152 Ga0495653_0347931 3300046463 Bacteria 954
153 Ga0495582_0345136 3300046473 Bacteria 857
154 Ga0495639_0149082 3300046475 Bacteria 1128
155 Ga0495662_0217855 3300046476 Bacteria 941
156 Ga0495608_0598606 3300046511 Bacteria 662
157 Ga0495618_0067047 3300046514 Bacteria 2282
158 Ga0495628_0091727 3300046516 Bacteria 2351
159 Ga0495630_0167101 3300046517 Bacteria 1675
160 Ga0495665_0107779 3300046531 Bacteria 1462
161 Ga0495640_0012591 3300046533 Bacteria 6458
162 Ga0495645_0028950 3300046543 Bacteria 4026
163 Ga0495645_0440432 3300046543 Bacteria 823
164 Ga0495635_0431218 3300046663 Bacteria 873
165 Ga0495613_0144432 3300046689 Bacteria 1699
166 Ga0495613_0253833 3300046689 Bacteria 1227
167 Ga0495624_0117146 3300046690 Bacteria 1637
168 Ga0495581_0340076 3300047315 Bacteria 876
169 Ga0495674_0007429 3300047319 Bacteria 10471
170 Ga0495674_0011064 3300047319 Bacteria 8518
171 Ga0495674_0460986 3300047319 Bacteria 1020
172 Ga0495684_0315721 3300047471 Bacteria 1118
173 Ga0495684_0770211 3300047471 Bacteria 631
174 Ga0495593_0108748 3300047673 Bacteria 1417
175 Ga0496100_0160272 3300048903 Bacteria 1612
176 Ga0496101_0791991 3300048904 Bacteria 748
177 Ga0496102_0342622 3300048905 Bacteria 1407
178 Ga0496103_0246151 3300048906 Bacteria 1150
179 Ga0496105_0237268 3300048908 Bacteria 1481
180 Ga0496106_0350827 3300048909 Bacteria 1185
181 Ga0496108_0433900 3300048911 Bacteria 1147
182 Ga0496109_1137959 3300048912 Bacteria 717
183 Ga0496112_0171528 3300048915 Bacteria 2134
184 Ga0496112_0437329 3300048915 Bacteria 1246
185 Ga0496112_1130599 3300048915 Unclassified 701
186 Ga0496113_0081665 3300048916 Bacteria 2478
187 Ga0496114_0044993 3300048917 Bacteria 3665
188 Ga0496119_0000507 3300048922 Bacteria 53026
189 Ga0496120_0000218 3300048923 Bacteria 99322
190 Ga0496123_0000279 3300048926 Bacteria 100723
191 Ga0496124_0001559 3300048927 Bacteria 33122
192 nmdc:mga09592_630744_c1 3300050508 Bacteria 916
193 nmdc:mga0qj67_157809_c1 3300050509 Bacteria 1841
194 nmdc:mga06r32_379711_c1 3300050510 Bacteria 1396
195 nmdc:mga0n895_523092_c1 3300050512 Bacteria 1194
196 nmdc:mga08x19_436493_c1 3300050514 Bacteria 921
197 Ga0495601_0000378 3300053077 Bacteria 23514
198 Ga0495601_0313996 3300053077 Bacteria 1021
199 Ga0495612_0038056 3300053078 Bacteria 1954
200 Ga0495619_0115496 3300053085 Bacteria 1837
201 Ga0500579_065420 3300053143 Bacteria 2132
202 Ga0500600_0031873 3300053149 Bacteria 3094
203 Ga0590075_005043 3300059424 Bacteria 3121
204 Ga0530510_0134950 3300061734 Bacteria 1817
205 2508673019 2508501039 Bacteria 9978592
206 2508675104 2508501039 Bacteria 9978592
207 2517761817 2517572101 Bacteria 6884336
208 2623498278 2622736605 Bacteria 4992138
209 2686534307 2684623035 Bacteria 8032739
210 2862508364 2862507626 Bacteria 9425308
211 2891968596 2891968417 Bacteria 5821697
212 2996223145 2996221748 Bacteria 6799777
213 8002779933 8002775197 Bacteria 10728764
214 8002784461 8002784119 Bacteria 9788632
215 Ga0070710_10003740
216 JGI25406J46586_10000968
217 rootH1_10057115
218 rootL2_10215919
219 Ga0068868_101570167
220 Ga0070691_10048309
221 Ga0070671_100247180
222 Ga0070674_100206813
223 Ga0070659_100264396
224 Ga0070709_10009039
225 Ga0070714_100061302
226 Ga0070713_100028829
227 Ga0070713_100181513
228 Ga0070713_100269975
229 Ga0070710_10058003
230 Ga0070710_10149713
231 Ga0070711_100020709
232 Ga0070711_100379667
233 Ga0070705_100690062
234 Ga0070685_10460694
235 Ga0070707_100055821
236 Ga0070698_100005404
237 Ga0070698_100037672
238 Ga0070698_100581786
239 Ga0070699_100044987
240 Ga0070679_101076254
241 Ga0070697_100091354
242 Ga0068853_100584048
243 Ga0070686_100968134
244 Ga0070695_100239478
245 Ga0070693_100150265
246 Ga0070665_100184619
247 Ga0068855_100193527
248 Ga0070664_100159323
249 Ga0068857_100372607
250 Ga0068859_100620957
251 Ga0068864_100411386
252 Ga0068870_10646128
253 Ga0068858_100187956
254 Ga0068862_100013121
255 Ga0081539_10001038
256 Ga0081539_10043068
257 Ga0070717_10015830
258 Ga0070715_10064138
259 Ga0070715_10180719
260 Ga0070716_100009485
261 Ga0070716_100021010
262 Ga0070712_100018456
263 Ga0070712_100128913
264 Ga0070712_100436188
265 Ga0068871_101752844
266 Ga0075430_100130543
267 Ga0075431_100960970
268 Ga0075434_100619000
269 Ga0097620_100620944
270 Ga0099795_10089018
271 Ga0105251_10166642
272 Ga0105240_11065258
273 Ga0105245_10073633
274 Ga0105247_10000056
275 Ga0105247_10139517
276 Ga0114129_10400908
277 Ga0105248_10012682
278 Ga0105237_10270071
279 Ga0105239_10221962
280 Ga0105246_10177175
281 Ga0157370_10148718
282 Ga0157374_11059515
283 Ga0157378_10381774
284 Ga0157372_10279373
285 Ga0157375_10149291
286 Ga0157379_10058535
287 Ga0157379_10174456
288 Ga0157376_10048963
289 Ga0213875_10022577
290 Ga0213875_10129359
291 Ga0207713_1100125
292 Ga0207692_10000879
293 Ga0207692_10003625
294 Ga0207692_10149465
295 Ga0207710_10000084
296 Ga0207680_10756171
297 Ga0207685_10085626
298 Ga0207699_10027761
299 Ga0207699_10069583
300 Ga0207699_10082980
301 Ga0207707_10543377
302 Ga0207671_10454867
303 Ga0207693_10116167
304 Ga0207693_10129437
305 Ga0207663_10165846
306 Ga0207663_10956892
307 Ga0207646_10005545
308 Ga0207646_10120338
309 Ga0207646_10621969
310 Ga0207650_11072921
311 Ga0207700_10003890
312 Ga0207700_10011562
313 Ga0207700_10237484
314 Ga0207664_10080919
315 Ga0207664_10133213
316 Ga0207664_10361277
317 Ga0207664_10452489
318 Ga0207644_10652928
319 Ga0207665_10023600
320 Ga0207665_10030868
321 Ga0207665_10105079
322 Ga0207711_10007154
323 Ga0207679_10282760
324 Ga0207679_10510127
325 Ga0207667_10248559
326 Ga0207668_11284308
327 Ga0207640_11303262
328 Ga0207658_10043117
329 Ga0207658_10539475
330 Ga0207677_10393867
331 Ga0207639_10513590
332 Ga0207702_10523052
333 Ga0207674_10347523
334 Ga0207675_100683923
335 Ga0207698_11466705
336 Ga0209179_1109142
337 Ga0307515_10169728
338 Ga0307515_10584563
339 Ga0307511_10024474
340 Ga0307512_10048887
341 Ga0307513_10028267
342 Ga0307513_10417933
343 Ga0307508_10075359
344 Ga0307508_10196357
345 Ga0307514_10202231
346 Ga0307516_10066338
347 Ga0307516_10080204
348 Ga0373959_0039800
349 Ga0373949_0055123
350 Ga0373923_0105705
351 Ga0373945_0029362
352 Ga0373961_0061995
353 Ga0373962_0000412
354 Ga0373935_0523600
355 Ga0373935_0686376
356 Ga0373935_1014302
357 Ga0373927_0110697
358 Ga0373947_0149014
359 Ga0373925_0000168
360 Ga0373925_0001610
361 Ga0373925_0072111
362 Ga0373925_0542395
363 Ga0451806_556004
364 Ga0466966_0289107
365 Ga0495653_0107269
366 Ga0495653_0347931
367 Ga0495582_0345136
368 Ga0495639_0149082
369 Ga0495662_0217855
370 Ga0495608_0598606
371 Ga0495618_0067047
372 Ga0495628_0091727
373 Ga0495630_0167101
374 Ga0495665_0107779
375 Ga0495640_0012591
376 Ga0495645_0028950
377 Ga0495645_0440432
378 Ga0495635_0431218
379 Ga0495613_0144432
380 Ga0495613_0253833
381 Ga0495624_0117146
382 Ga0495581_0340076
383 Ga0495674_0007429
384 Ga0495674_0011064
385 Ga0495674_0460986
386 Ga0495684_0315721
387 Ga0495684_0770211
388 Ga0495593_0108748
389 Ga0496100_0160272
390 Ga0496101_0791991
391 Ga0496102_0342622
392 Ga0496103_0246151
393 Ga0496105_0237268
394 Ga0496106_0350827
395 Ga0496108_0433900
396 Ga0496109_1137959
397 Ga0496112_0171528
398 Ga0496112_0437329
399 Ga0496112_1130599
400 Ga0496113_0081665
401 Ga0496114_0044993
402 Ga0496119_0000507
403 Ga0496120_0000218
404 Ga0496123_0000279
405 Ga0496124_0001559
406 nmdc:mga09592_630744_c1
407 nmdc:mga0qj67_157809_c1
408 nmdc:mga06r32_379711_c1
409 nmdc:mga0n895_523092_c1
410 nmdc:mga08x19_436493_c1
411 Ga0495601_0000378
412 Ga0495601_0313996
413 Ga0495612_0038056
414 Ga0495619_0115496
415 Ga0500579_065420
416 Ga0500600_0031873
417 Ga0590075_005043
418 Ga0530510_0134950
419 2508673019
420 2508675104
421 2517761817
422 2623498278
423 2686534307
424 2862508364
425 2891968596
426 2996223145
427 8002779933
428 8002784461

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12802

MarR_2

MarR family

41

107

0.96

PF01047

MarR

MarR family

49

109

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
4kmf-assembly1.cif.gz_A-2 crystal structure of zalpha domain from carassius auratus pkz in complex with z-dna 0.9403 46 108
3zpl-assembly2.cif.gz_F crystal structure of sco3205, a marr family transcriptional regulator from streptomyces coelicolor, in complex with dna 0.9335 10 159
4lb5-assembly1.cif.gz_A-2 crystal structure of pkz zalpha in complex with ds(cg)6 (hexagonal form) 0.9327 45 108
3zpl-assembly2.cif.gz_E crystal structure of sco3205, a marr family transcriptional regulator from streptomyces coelicolor, in complex with dna 0.9251 6 155
3zmd-assembly2.cif.gz_D crystal structure of absc, a marr family transcriptional regulator from streptomyces coelicolor 0.9236 8 153
ID Description Score Start End Superfamily
af_Q57824_147_206_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9527 43 106 1.10.10.10
4kmfA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9403 46 108 1.10.10.10
4lb5A00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9327 45 108 1.10.10.10
1s3jB02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9245 43 108 1.10.10.10
af_Q57824_147_206_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.923 43 106 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A7K3LXQ4-F1-model_v4 MarR family transcriptional regulator 0.9697 17 156 GO:0003700
GO:0006950
AF-A0A1D8TC35-F1-model_v4 MarR family transcriptional regulator 0.969 17 153 GO:0003700
GO:0006950
AF-A0A4R4Q7V2-F1-model_v4 MarR family transcriptional regulator 0.9675 21 161 GO:0003700
GO:0006950
AF-A0A847A5J2-F1-model_v4 MarR family transcriptional regulator 0.967 21 156 GO:0003700
GO:0006950
AF-A0A0Q8DCS1-F1-model_v4 HTH marR-type domain-containing protein 0.9601 17 154 GO:0003700
GO:0006950

Map