F324658

General Info

Members Datasets Scaffolds Average Seq Length
213 162 426 306

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|3006321560|3006324504
Length 373
Sequence PAVAGPAAGDRATADFVSHRELLFSVVYNMLGSVSDTEDVLQETWLAWSRRAGDTAGEPIGNPRAYLVRIAVNQALARQASISRRRETYIGPWLPEPLATGATPQTEDSAQAARAADAAESVLRGESVSMAMLVVLETLTPLERAVFVLHEVFGYAHGEIAGILGRTPAAVRQLAHRAREHVQARRPRYQADRRLQQQVTERFIAAALGGDLAGLMSLLAPDVTLWADGGGKPGALVRPVSGRENVARLLTGYASRRLPRTADIRYRQVNGDPSVVVVTDDSPSAVMVVDLDAAGDKVTDIYLVVNPEKLSGVGAEDAEGTGGAGDPGRDGEGGASWLPGEADGPGHAGAPAGTGGPGRGGRRDGLGGARSHD

Samples

Sample ID Description Type Environment
1 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
2 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
3 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
4 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
5 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
6 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
7 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
8 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
9 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
10 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
11 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
12 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
13 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
14 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
15 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
16 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
17 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
18 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
21 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
22 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
23 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
24 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
25 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
26 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
27 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
28 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
29 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
30 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
31 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
32 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
33 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
34 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
35 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
36 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
37 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
38 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
39 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
40 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
41 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
42 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
43 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
44 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
45 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
46 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
47 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
48 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
49 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
50 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
51 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
52 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
53 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
54 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
55 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
56 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
57 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
58 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
59 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
60 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
61 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
62 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
63 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
64 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
65 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
66 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
67 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
68 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
69 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
70 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
71 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
72 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
73 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
74 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
75 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
76 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
77 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
78 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
79 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
80 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
81 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
82 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
83 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
84 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
85 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
86 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
87 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
88 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
89 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
90 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
91 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
92 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
93 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
94 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
95 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
96 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
97 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
98 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
99 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
100 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
101 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
102 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
103 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
104 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
105 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
106 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
107 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
108 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
109 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
116 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
117 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
119 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
120 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
121 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
122 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
123 3300053101 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 endosphere Metagenome Endosphere
124 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
125 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
126 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
127 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
128 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
129 2643221647 Streptomyces sp. Root369 Isolate Unclassified
130 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
131 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
132 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
133 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
134 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
135 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
136 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
137 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
138 2867428634 Streptomyces sp. RP5T Isolate Unclassified
139 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
140 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
141 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
142 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
143 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
144 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
145 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
146 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
147 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
148 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
149 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
150 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
151 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
152 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
153 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
154 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
155 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
156 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
157 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
158 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
159 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
160 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified
161 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere
162 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 82.16
Metatranscriptomes 0
Isolates 17.84

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.23
Nodule 0
Rhizoplane 7.98
Rhizosphere 72.3
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10016769 3300003323 Bacteria 8302
2 Ga0070682_100152144 3300005337 Bacteria 1589
3 Ga0070682_100247803 3300005337 Bacteria 1283
4 Ga0070684_100159801 3300005535 Bacteria 2044
5 Ga0070665_100443628 3300005548 Bacteria 1307
6 Ga0068852_100427394 3300005616 Bacteria 1308
7 Ga0068861_100352345 3300005719 Bacteria 1292
8 Ga0075363_100040994 3300006048 Bacteria 2442
9 Ga0075364_10189969 3300006051 Bacteria 1391
10 Ga0075367_10018499 3300006178 Bacteria 3846
11 Ga0075430_100042224 3300006846 Bacteria 3857
12 Ga0105245_10055098 3300009098 Bacteria 3571
13 Ga0105245_10356892 3300009098 Bacteria 1450
14 Ga0105246_10201159 3300011119 Bacteria 1549
15 Ga0157375_10769907 3300013308 Bacteria 1113
16 Ga0157380_10289361 3300014326 Bacteria 1503
17 Ga0183367_1016 3300015688 Bacteria 290198
18 Ga0209758_1008560 3300025297 Bacteria 6588
19 Ga0207426_1020832 3300025302 Bacteria 2274
20 Ga0207659_10369738 3300025926 Bacteria 1193
21 Ga0207678_10061802 3300026067 Bacteria 3222
22 Ga0207678_10132862 3300026067 Bacteria 2123
23 Ga0207675_100153256 3300026118 Bacteria 2195
24 Ga0207698_10320124 3300026142 Bacteria 1452
25 Ga0209371_1014675 3300027312 Bacteria 2137
26 Ga0268264_10272245 3300028381 Bacteria 1582
27 Ga0307517_10006188 3300028786 Bacteria 17816
28 Ga0307515_10000475 3300028794 Bacteria 96024
29 Ga0307515_10190437 3300028794 Bacteria 1963
30 Ga0307511_10004746 3300030521 Bacteria 13896
31 Ga0307511_10052032 3300030521 Bacteria 3271
32 Ga0307512_10002772 3300030522 Bacteria 21389
33 Ga0307513_10366883 3300031456 Bacteria 1183
34 Ga0307509_10010980 3300031507 Bacteria 11035
35 Ga0307509_10062150 3300031507 Bacteria 3939
36 Ga0307408_100320884 3300031548 Bacteria 1305
37 Ga0307514_10068408 3300031649 Bacteria 2676
38 Ga0307514_10075348 3300031649 Bacteria 2517
39 Ga0307516_10007583 3300031730 Bacteria 12439
40 Ga0307518_10038745 3300031838 Bacteria 3464
41 Ga0307410_10116688 3300031852 Bacteria 1940
42 Ga0307407_10019077 3300031903 Bacteria 3485
43 Ga0307407_10030115 3300031903 Bacteria 2925
44 Ga0307407_10034175 3300031903 Bacteria 2781
45 Ga0307409_100351988 3300031995 Bacteria 1390
46 Ga0307416_100267228 3300032002 Bacteria 1676
47 Ga0307416_100356779 3300032002 Bacteria 1482
48 Ga0307416_100558832 3300032002 Bacteria 1219
49 Ga0307414_10134240 3300032004 Bacteria 1927
50 Ga0307411_10192660 3300032005 Bacteria 1558
51 Ga0307415_100107803 3300032126 Bacteria 2059
52 Ga0307507_10012182 3300033179 Bacteria 10672
53 Ga0307510_10013969 3300033180 Bacteria 9504
54 Ga0307510_10264098 3300033180 Bacteria 1201
55 Ga0395901_0244830 3300038443 Bacteria 1869
56 Ga0439436_0001855 3300041404 Bacteria 6242
57 Ga0439439_0004454 3300041406 Bacteria 3159
58 Ga0451793_0819055 3300041452 Bacteria 4246
59 Ga0451797_1249120 3300041453 Bacteria 6339
60 Ga0451795_1337620 3300041456 Bacteria 1265
61 Ga0451833_0884490 3300041491 Bacteria 1707
62 Ga0451839_0340564 3300041496 Bacteria 1928
63 Ga0451843_0146450 3300041509 Bacteria 5063
64 Ga0451853_0891630 3300041512 Bacteria 1117
65 Ga0451853_2767645 3300041512 Bacteria 2432
66 Ga0439448_0008151 3300042005 Bacteria 3060
67 Ga0439455_0015188 3300042012 Bacteria 1768
68 Ga0439457_000752 3300042014 Bacteria 9644
69 Ga0450903_000097 3300042138 Bacteria 18334
70 Ga0439458_0001483 3300042157 Bacteria 5905
71 Ga0466961_0043334 3300044693 Bacteria 2883
72 Ga0466961_0045269 3300044693 Bacteria 2815
73 Ga0466963_0195345 3300044694 Bacteria 1414
74 Ga0466970_0022062 3300044765 Bacteria 3323
75 Ga0466970_0111531 3300044765 Bacteria 1494
76 Ga0466957_0028309 3300044842 Bacteria 3336
77 Ga0466960_0023118 3300044901 Bacteria 2788
78 Ga0466960_0125472 3300044901 Bacteria 1349
79 Ga0466959_0014317 3300045049 Bacteria 5758
80 Ga0466959_0039695 3300045049 Bacteria 3479
81 Ga0466958_0105984 3300045836 Bacteria 1752
82 Ga0466967_0030333 3300045976 Bacteria 4537
83 Ga0466967_0078954 3300045976 Bacteria 2966
84 Ga0466967_0207948 3300045976 Bacteria 1855
85 Ga0495592_0053805 3300046454 Bacteria 2984
86 Ga0495629_0022031 3300046459 Bacteria 4544
87 Ga0495629_0046545 3300046459 Bacteria 3042
88 Ga0495629_0145988 3300046459 Bacteria 1645
89 Ga0495651_0007257 3300046462 Bacteria 8471
90 Ga0495651_0154292 3300046462 Bacteria 1652
91 Ga0495662_0001503 3300046476 Bacteria 11566
92 Ga0495664_0018505 3300046477 Bacteria 3992
93 Ga0495664_0093314 3300046477 Bacteria 1811
94 Ga0495628_0044002 3300046516 Bacteria 3554
95 Ga0495652_0244447 3300046529 Bacteria 1333
96 Ga0495640_0012154 3300046533 Bacteria 6591
97 Ga0495587_0009764 3300046536 Bacteria 6134
98 Ga0495645_0045754 3300046543 Bacteria 3193
99 Ga0495634_0007646 3300046642 Bacteria 8093
100 Ga0495635_0002252 3300046663 Bacteria 13112
101 Ga0495635_0181809 3300046663 Bacteria 1429
102 Ga0495588_0001984 3300046674 Bacteria 8749
103 Ga0495657_0003129 3300046675 Bacteria 13666
104 Ga0495657_0010107 3300046675 Bacteria 7111
105 Ga0495623_0052751 3300046679 Bacteria 2569
106 Ga0495646_0001951 3300046680 Bacteria 12428
107 Ga0495613_0000946 3300046689 Bacteria 22187
108 Ga0495613_0056936 3300046689 Bacteria 2870
109 Ga0495671_0044217 3300046692 Bacteria 2234
110 Ga0495600_0150431 3300046809 Bacteria 1507
111 Ga0495581_0008612 3300047315 Bacteria 5910
112 Ga0495581_0150338 3300047315 Bacteria 1360
113 Ga0495604_0019341 3300047317 Bacteria 5451
114 Ga0495604_0031888 3300047317 Bacteria 4178
115 Ga0495636_0000845 3300047318 Bacteria 11296
116 Ga0495674_0054090 3300047319 Bacteria 3527
117 Ga0495676_0001280 3300047321 Bacteria 21567
118 Ga0495676_0008935 3300047321 Bacteria 9150
119 Ga0495680_0231699 3300047322 Bacteria 1315
120 Ga0495687_001299 3300047443 Bacteria 23456
121 Ga0495687_004895 3300047443 Bacteria 8781
122 Ga0495675_0035037 3300047444 Bacteria 3206
123 Ga0495685_028809 3300047447 Bacteria 1910
124 Ga0495681_0008689 3300047470 Bacteria 6341
125 Ga0495684_0179253 3300047471 Bacteria 1571
126 Ga0495686_0062702 3300047472 Bacteria 2305
127 Ga0495593_0011093 3300047673 Bacteria 5183
128 Ga0495602_0046550 3300048088 Bacteria 3917
129 Ga0495602_0220378 3300048088 Bacteria 1433
130 Ga0495614_0017973 3300048089 Bacteria 3065
131 Ga0496100_0504935 3300048903 Bacteria 932
132 Ga0496102_0047310 3300048905 Bacteria 3908
133 Ga0496105_0000832 3300048908 Bacteria 20983
134 Ga0496108_0000812 3300048911 Bacteria 24256
135 Ga0496108_0546768 3300048911 Bacteria 1010
136 Ga0496109_0001448 3300048912 Bacteria 19658
137 Ga0496109_0710864 3300048912 Bacteria 942
138 Ga0496111_0000028 3300048914 Bacteria 58695
139 Ga0496113_0126751 3300048916 Bacteria 2000
140 Ga0496114_0019252 3300048917 Bacteria 5530
141 Ga0496114_0119715 3300048917 Bacteria 2263
142 Ga0496114_0450654 3300048917 Bacteria 1140
143 Ga0496115_0128062 3300048918 Bacteria 2092
144 Ga0501032_0014374 3300049569 Bacteria 5607
145 Ga0501032_0120730 3300049569 Bacteria 1733
146 Ga0501033_0022601 3300049570 Bacteria 4744
147 Ga0501036_0135938 3300049572 Bacteria 2075
148 Ga0501038_0009663 3300049574 Bacteria 8846
149 Ga0501038_0039667 3300049574 Bacteria 4118
150 Ga0501043_0166502 3300049579 Bacteria 1721
151 Ga0501047_0013562 3300049581 Bacteria 7728
152 Ga0501047_0015251 3300049581 Bacteria 7321
153 Ga0501047_0132164 3300049581 Bacteria 2376
154 Ga0501047_0176231 3300049581 Bacteria 2005
155 Ga0501070_0336176 3300049586 Bacteria 1227
156 Ga0501080_0021556 3300049742 Bacteria 5964
157 Ga0501080_0355541 3300049742 Bacteria 1322
158 Ga0501035_0008584 3300049822 Bacteria 9510
159 Ga0501035_0027985 3300049822 Bacteria 5149
160 Ga0501035_0072658 3300049822 Bacteria 3044
161 Ga0501035_0119402 3300049822 Bacteria 2306
162 Ga0501044_0009661 3300049823 Bacteria 10492
163 Ga0501044_0017554 3300049823 Bacteria 7677
164 Ga0501044_0027451 3300049823 Bacteria 6017
165 Ga0501044_0165855 3300049823 Bacteria 2183
166 nmdc:mga03n38_15480_c1 3300050490 Bacteria 2946
167 nmdc:mga06z11_1177_c1 3300050494 Bacteria 9610
168 nmdc:mga0qj67_86612_c1 3300050509 Bacteria 2513
169 nmdc:mga08y16_258273_c1 3300050511 Bacteria 1799
170 Ga0500553_077183 3300053101 Bacteria 1512
171 Ga0500560_000239 3300053107 Bacteria 6736
172 Ga0466962_0006700 3300061719 Bacteria 5522
173 Ga0466962_0057791 3300061719 Bacteria 1852
174 Ga0466962_0101737 3300061719 Bacteria 1380
175 Ga0466962_0105782 3300061719 Bacteria 1353
176 3006324504 3006321560 Bacteria 8247479
177 2585303278 2582581313 Bacteria 10042643
178 2585320831 2582581314 Bacteria 11452267
179 2644266774 2643221647 Bacteria 10741251
180 2676488801 2675903060 Bacteria 10051191
181 2753072542 2751185734 Bacteria 8863695
182 2785374105 2784746768 Bacteria 10036182
183 2786674352 2786546132 Bacteria 10419719
184 2793982315 2791355406 Bacteria 11364898
185 2812353891 2811994879 Bacteria 9313447
186 2852639084 2852635781 Bacteria 8251373
187 2862282705 2862281513 Bacteria 9621493
188 2867434388 2867428634 Bacteria 9590268
189 2877677276 2877676314 Bacteria 9512378
190 2912764946 2912757875 Bacteria 7940295
191 2946071804 2946064051 Bacteria 8957905
192 2947232695 2947224130 Bacteria 9938529
193 2954382009 2954380949 Bacteria 10050426
194 2954681059 2954673503 Bacteria 9685905
195 2954683098 2954682443 Bacteria 9862841
196 2954692823 2954691527 Bacteria 10720516
197 2954707896 2954701450 Bacteria 10834262
198 2954712460 2954711539 Bacteria 10867210
199 2954722414 2954721474 Bacteria 10456478
200 2954739442 2954731030 Bacteria 10243860
201 2954741293 2954740390 Bacteria 10229294
202 2954758270 2954749733 Bacteria 10366972
203 2954760310 2954759201 Bacteria 9358192
204 3006328563 3006321560 Bacteria 8247479
205 3006398123 3006393351 Bacteria 6615579
206 8047900047 8047893842 Bacteria 11723082
207 8048131167 8048127548 Bacteria 11053136
208 8048358881 8048356638 Bacteria 11044339
209 8048376994 8048369669 Bacteria 11666822
210 8048386049 8048379754 Bacteria 11877923
211 8055177294 8055172936 Bacteria 9305943
212 8056448493 8056447290 Bacteria 7680491
213 8056834697 8056829672 Bacteria 9045328
214 rootH1_10016769
215 Ga0070682_100152144
216 Ga0070682_100247803
217 Ga0070684_100159801
218 Ga0070665_100443628
219 Ga0068852_100427394
220 Ga0068861_100352345
221 Ga0075363_100040994
222 Ga0075364_10189969
223 Ga0075367_10018499
224 Ga0075430_100042224
225 Ga0105245_10055098
226 Ga0105245_10356892
227 Ga0105246_10201159
228 Ga0157375_10769907
229 Ga0157380_10289361
230 Ga0183367_1016
231 Ga0209758_1008560
232 Ga0207426_1020832
233 Ga0207659_10369738
234 Ga0207678_10061802
235 Ga0207678_10132862
236 Ga0207675_100153256
237 Ga0207698_10320124
238 Ga0209371_1014675
239 Ga0268264_10272245
240 Ga0307517_10006188
241 Ga0307515_10000475
242 Ga0307515_10190437
243 Ga0307511_10004746
244 Ga0307511_10052032
245 Ga0307512_10002772
246 Ga0307513_10366883
247 Ga0307509_10010980
248 Ga0307509_10062150
249 Ga0307408_100320884
250 Ga0307514_10068408
251 Ga0307514_10075348
252 Ga0307516_10007583
253 Ga0307518_10038745
254 Ga0307410_10116688
255 Ga0307407_10019077
256 Ga0307407_10030115
257 Ga0307407_10034175
258 Ga0307409_100351988
259 Ga0307416_100267228
260 Ga0307416_100356779
261 Ga0307416_100558832
262 Ga0307414_10134240
263 Ga0307411_10192660
264 Ga0307415_100107803
265 Ga0307507_10012182
266 Ga0307510_10013969
267 Ga0307510_10264098
268 Ga0395901_0244830
269 Ga0439436_0001855
270 Ga0439439_0004454
271 Ga0451793_0819055
272 Ga0451797_1249120
273 Ga0451795_1337620
274 Ga0451833_0884490
275 Ga0451839_0340564
276 Ga0451843_0146450
277 Ga0451853_0891630
278 Ga0451853_2767645
279 Ga0439448_0008151
280 Ga0439455_0015188
281 Ga0439457_000752
282 Ga0450903_000097
283 Ga0439458_0001483
284 Ga0466961_0043334
285 Ga0466961_0045269
286 Ga0466963_0195345
287 Ga0466970_0022062
288 Ga0466970_0111531
289 Ga0466957_0028309
290 Ga0466960_0023118
291 Ga0466960_0125472
292 Ga0466959_0014317
293 Ga0466959_0039695
294 Ga0466958_0105984
295 Ga0466967_0030333
296 Ga0466967_0078954
297 Ga0466967_0207948
298 Ga0495592_0053805
299 Ga0495629_0022031
300 Ga0495629_0046545
301 Ga0495629_0145988
302 Ga0495651_0007257
303 Ga0495651_0154292
304 Ga0495662_0001503
305 Ga0495664_0018505
306 Ga0495664_0093314
307 Ga0495628_0044002
308 Ga0495652_0244447
309 Ga0495640_0012154
310 Ga0495587_0009764
311 Ga0495645_0045754
312 Ga0495634_0007646
313 Ga0495635_0002252
314 Ga0495635_0181809
315 Ga0495588_0001984
316 Ga0495657_0003129
317 Ga0495657_0010107
318 Ga0495623_0052751
319 Ga0495646_0001951
320 Ga0495613_0000946
321 Ga0495613_0056936
322 Ga0495671_0044217
323 Ga0495600_0150431
324 Ga0495581_0008612
325 Ga0495581_0150338
326 Ga0495604_0019341
327 Ga0495604_0031888
328 Ga0495636_0000845
329 Ga0495674_0054090
330 Ga0495676_0001280
331 Ga0495676_0008935
332 Ga0495680_0231699
333 Ga0495687_001299
334 Ga0495687_004895
335 Ga0495675_0035037
336 Ga0495685_028809
337 Ga0495681_0008689
338 Ga0495684_0179253
339 Ga0495686_0062702
340 Ga0495593_0011093
341 Ga0495602_0046550
342 Ga0495602_0220378
343 Ga0495614_0017973
344 Ga0496100_0504935
345 Ga0496102_0047310
346 Ga0496105_0000832
347 Ga0496108_0000812
348 Ga0496108_0546768
349 Ga0496109_0001448
350 Ga0496109_0710864
351 Ga0496111_0000028
352 Ga0496113_0126751
353 Ga0496114_0019252
354 Ga0496114_0119715
355 Ga0496114_0450654
356 Ga0496115_0128062
357 Ga0501032_0014374
358 Ga0501032_0120730
359 Ga0501033_0022601
360 Ga0501036_0135938
361 Ga0501038_0009663
362 Ga0501038_0039667
363 Ga0501043_0166502
364 Ga0501047_0013562
365 Ga0501047_0015251
366 Ga0501047_0132164
367 Ga0501047_0176231
368 Ga0501070_0336176
369 Ga0501080_0021556
370 Ga0501080_0355541
371 Ga0501035_0008584
372 Ga0501035_0027985
373 Ga0501035_0072658
374 Ga0501035_0119402
375 Ga0501044_0009661
376 Ga0501044_0017554
377 Ga0501044_0027451
378 Ga0501044_0165855
379 nmdc:mga03n38_15480_c1
380 nmdc:mga06z11_1177_c1
381 nmdc:mga0qj67_86612_c1
382 nmdc:mga08y16_258273_c1
383 Ga0500553_077183
384 Ga0500560_000239
385 Ga0466962_0006700
386 Ga0466962_0057791
387 Ga0466962_0101737
388 Ga0466962_0105782
389 3006324504
390 2585303278
391 2585320831
392 2644266774
393 2676488801
394 2753072542
395 2785374105
396 2786674352
397 2793982315
398 2812353891
399 2852639084
400 2862282705
401 2867434388
402 2877677276
403 2912764946
404 2946071804
405 2947232695
406 2954382009
407 2954681059
408 2954683098
409 2954692823
410 2954707896
411 2954712460
412 2954722414
413 2954739442
414 2954741293
415 2954758270
416 2954760310
417 3006328563
418 3006398123
419 8047900047
420 8048131167
421 8048358881
422 8048376994
423 8048386049
424 8055177294
425 8056448493
426 8056834697

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04545

Sigma70_r4

Sigma-70, region 4

135

184

0.96

PF08281

Sigma70_r4_2

Sigma-70, region 4

129

182

0.94

PF04542

Sigma70_r2

Sigma-70 region 2

16

85

0.9

Map