F324311

General Info

Members Datasets Scaffolds Average Seq Length
213 145 426 445

Family's Representative Sequence

Representative Sequence 3300041997|Ga0439431_0002295|Ga0439431_0002295_2754_4196
Length 480
Sequence VVEEVAQRPSRNLEPVVCVDFGSTFTKAALVDVTSGSIIASASSPTTIDTDVLDGFETCLLALSDSDERAADAEVLACSSAGGGLRVAVLGNEALVTAEAGRRVALSSGGKVVRVLAAADADDAAYAELVGTADADVVLLTGGTDGGNSEVLLAGARSLVAAGWTGPVVVAGNVEAQSEVAGILAGVPHVIADNVVPRIGVLEPQSARSAIREVFLSHVIGGKHLSARADFLAMVRGATPDVVLTGVELLARGNDPERPGIGDVVVVDVGGATTDVHSVVEVDPETGAVESGGLAREVVATTPVTRTVEGDLGMRWSAVTTVEEGIAAGLVEDGDDRLREAAGRRFADPGFLPEDPEETGYDELLAAAASGLALRRHAGRSRVVVSPEGRVVERSGKDLREVDLLVCSGGVFRNGIEGAEKRMLADSTGEPPGGWQLPRAPRVVVDTDYVLAAAGLLAPTHPEAAYRLVRTLWEPVAREH

Samples

Sample ID Description Type Environment
1 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
6 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
11 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
12 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
21 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
22 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
23 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
24 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
25 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
26 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
27 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
28 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
29 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
30 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
33 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
34 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
35 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
38 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
39 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
40 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
41 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
42 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
43 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
44 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
45 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
62 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
63 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
64 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
65 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
66 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
67 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
68 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
69 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
70 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
71 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
72 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
73 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
74 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
75 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
76 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
77 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
78 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
79 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
80 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
81 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
82 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
83 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
84 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
85 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
86 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
87 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
88 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
89 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
90 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
91 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
92 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
93 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
94 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
95 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
96 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
97 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
98 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
99 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
102 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
103 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
108 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
109 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
110 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
111 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
112 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
113 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
114 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
115 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
116 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
117 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
118 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
119 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
120 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
121 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
122 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
123 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
124 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
125 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
126 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
127 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
128 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
129 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
130 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
131 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
132 3300053099 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 endosphere Metagenome Endosphere
133 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
134 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
135 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
136 2643221641 Nocardioides sp. Root122 Isolate Unclassified
137 2739367898 Nocardioides sp. CF479 Isolate Unclassified
138 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
139 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
140 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
141 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
142 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
143 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
144 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
145 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 95.31
Metatranscriptomes 0
Isolates 4.69

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.62
Nodule 0.47
Rhizoplane 12.21
Rhizosphere 69.48
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0439431_0002295 3300041997 Bacteria 4221
2 Ga0070658_10095222 3300005327 Bacteria 2457
3 Ga0070683_100173602 3300005329 Bacteria 2046
4 Ga0070682_100018860 3300005337 Bacteria 4040
5 Ga0070675_100045442 3300005354 Bacteria 3593
6 Ga0070674_100020078 3300005356 Bacteria 4260
7 Ga0070659_100132038 3300005366 Bacteria 2029
8 Ga0070667_100048745 3300005367 Bacteria 3566
9 Ga0070714_100001548 3300005435 Bacteria 16744
10 Ga0070700_100002442 3300005441 Bacteria 9451
11 Ga0070700_100010207 3300005441 Bacteria 5179
12 Ga0070678_100099095 3300005456 Bacteria 2254
13 Ga0068867_100056091 3300005459 Bacteria 2914
14 Ga0070698_100027045 3300005471 Bacteria 5965
15 Ga0070679_100036594 3300005530 Bacteria 4871
16 Ga0070684_100048446 3300005535 Bacteria 3687
17 Ga0070665_100198506 3300005548 Bacteria 2007
18 Ga0070664_100087939 3300005564 Bacteria 2687
19 Ga0068857_100135906 3300005577 Bacteria 2220
20 Ga0068852_100217815 3300005616 Bacteria 1814
21 Ga0068864_100001246 3300005618 Bacteria 21141
22 Ga0068861_100019255 3300005719 Bacteria 4876
23 Ga0068860_100003029 3300005843 Bacteria 17345
24 Ga0081455_10000335 3300005937 Bacteria 61838
25 Ga0081455_10066497 3300005937 Bacteria 3010
26 Ga0081539_10033206 3300005985 Bacteria 3147
27 Ga0075365_10003137 3300006038 Bacteria 8423
28 Ga0075365_10012183 3300006038 Bacteria 5095
29 Ga0075365_10019648 3300006038 Bacteria 4175
30 Ga0075365_10019714 3300006038 Bacteria 4169
31 Ga0075368_10002440 3300006042 Bacteria 6066
32 Ga0075368_10015845 3300006042 Bacteria 2801
33 Ga0075363_100001067 3300006048 Bacteria 9908
34 Ga0075363_100017798 3300006048 Bacteria 3530
35 Ga0075363_100046830 3300006048 Bacteria 2295
36 Ga0075363_100067557 3300006048 Bacteria 1937
37 Ga0075364_10008117 3300006051 Bacteria 6263
38 Ga0075364_10019590 3300006051 Bacteria 4247
39 Ga0075364_10040392 3300006051 Bacteria 3026
40 Ga0075367_10001374 3300006178 Bacteria 10385
41 Ga0075367_10069575 3300006178 Bacteria 2113
42 Ga0075367_10112228 3300006178 Bacteria 1674
43 Ga0075370_10006134 3300006353 Bacteria 6028
44 Ga0075428_100000084 3300006844 Bacteria 78189
45 Ga0075428_100003777 3300006844 Bacteria 16595
46 Ga0075428_100103710 3300006844 Bacteria 3101
47 Ga0075430_100002022 3300006846 Bacteria 16724
48 Ga0075430_100025192 3300006846 Bacteria 5060
49 Ga0075431_100008538 3300006847 Bacteria 10257
50 Ga0075431_100080782 3300006847 Bacteria 3357
51 Ga0075429_100002536 3300006880 Bacteria 15383
52 Ga0075429_100062319 3300006880 Bacteria 3249
53 Ga0111539_10013847 3300009094 Bacteria 10082
54 Ga0111539_10042701 3300009094 Bacteria 5442
55 Ga0114129_10003871 3300009147 Bacteria 21109
56 Ga0114129_10044526 3300009147 Bacteria 6243
57 Ga0105243_10062990 3300009148 Bacteria 2971
58 Ga0105242_10209875 3300009176 Bacteria 1735
59 Ga0105248_10095187 3300009177 Bacteria 3353
60 Ga0105237_10055996 3300009545 Bacteria 3948
61 Ga0105249_10210999 3300009553 Bacteria 1906
62 Ga0157369_10038714 3300013105 Bacteria 5214
63 Ga0163162_10008527 3300013306 Bacteria 9991
64 Ga0157375_10215270 3300013308 Bacteria 2079
65 Ga0207642_10010474 3300025899 Bacteria 3271
66 Ga0207647_10004862 3300025904 Bacteria 9930
67 Ga0207647_10061693 3300025904 Bacteria 2286
68 Ga0207707_10093032 3300025912 Bacteria 2634
69 Ga0207657_10019981 3300025919 Bacteria 6345
70 Ga0207657_10105050 3300025919 Bacteria 2339
71 Ga0207652_10040686 3300025921 Bacteria 3948
72 Ga0207664_10007545 3300025929 Bacteria 7548
73 Ga0207709_10078485 3300025935 Bacteria 2120
74 Ga0207704_10026330 3300025938 Bacteria 3190
75 Ga0207704_10026902 3300025938 Bacteria 3163
76 Ga0207658_10048351 3300025986 Bacteria 3119
77 Ga0207708_10000977 3300026075 Bacteria 21445
78 Ga0207708_10078055 3300026075 Bacteria 2542
79 Ga0207702_10113653 3300026078 Bacteria 2412
80 Ga0207702_10215839 3300026078 Bacteria 1786
81 Ga0207648_10002802 3300026089 Bacteria 18493
82 Ga0207683_10119137 3300026121 Bacteria 2368
83 Ga0207698_10056175 3300026142 Bacteria 3038
84 Ga0207698_10083704 3300026142 Bacteria 2583
85 Ga0207698_10209977 3300026142 Bacteria 1751
86 Ga0268266_10157021 3300028379 Bacteria 2056
87 Ga0268264_10002196 3300028381 Bacteria 17345
88 Ga0307413_10005674 3300031824 Bacteria 5602
89 Ga0307410_10005846 3300031852 Bacteria 6566
90 Ga0307407_10004372 3300031903 Bacteria 5989
91 Ga0307407_10034023 3300031903 Bacteria 2786
92 Ga0307409_100015244 3300031995 Bacteria 5036
93 Ga0307409_100053203 3300031995 Bacteria 3109
94 Ga0307416_100337009 3300032002 Bacteria 1519
95 Ga0307414_10174062 3300032004 Bacteria 1724
96 Ga0307415_100003636 3300032126 Bacteria 7884
97 Ga0307415_100077315 3300032126 Bacteria 2363
98 Ga0395899_0011723 3300037312 Bacteria 6711
99 Ga0395899_0031102 3300037312 Bacteria 4013
100 Ga0395900_0125068 3300037418 Bacteria 2637
101 Ga0395898_0066518 3300037466 Bacteria 3491
102 Ga0395905_0048592 3300037471 Bacteria 3976
103 Ga0436364_0136021 3300037853 Bacteria 3899
104 Ga0395901_0132863 3300038443 Bacteria 2615
105 Ga0439445_0011406 3300042004 Bacteria 2120
106 Ga0466966_0019828 3300044684 Bacteria 4422
107 Ga0466961_0005548 3300044693 Bacteria 7960
108 Ga0466961_0006235 3300044693 Bacteria 7575
109 Ga0466961_0127813 3300044693 Bacteria 1594
110 Ga0466963_0010576 3300044694 Bacteria 5591
111 Ga0466964_0043286 3300044706 Bacteria 1826
112 Ga0466957_0015045 3300044842 Bacteria 4514
113 Ga0466959_0006536 3300045049 Bacteria 8087
114 Ga0466967_0043428 3300045976 Bacteria 3892
115 Ga0466967_0065175 3300045976 Bacteria 3241
116 Ga0466967_0074924 3300045976 Bacteria 3041
117 Ga0466967_0201869 3300045976 Bacteria 1884
118 Ga0495629_0131661 3300046459 Bacteria 1742
119 Ga0495582_0066868 3300046473 Bacteria 1986
120 Ga0495657_0043969 3300046675 Bacteria 3042
121 Ga0495593_0026990 3300047673 Bacteria 3165
122 Ga0496101_0053740 3300048904 Bacteria 2907
123 Ga0496102_0019982 3300048905 Bacteria 5909
124 Ga0496102_0045179 3300048905 Bacteria 3998
125 Ga0496104_0013000 3300048907 Bacteria 7494
126 Ga0496105_0000893 3300048908 Bacteria 20396
127 Ga0496106_0005530 3300048909 Bacteria 9351
128 Ga0496107_0006972 3300048910 Bacteria 7786
129 Ga0496107_0052896 3300048910 Bacteria 2929
130 Ga0496108_0007825 3300048911 Bacteria 8661
131 Ga0496108_0106272 3300048911 Bacteria 2397
132 Ga0496108_0125207 3300048911 Bacteria 2206
133 Ga0496109_0034882 3300048912 Bacteria 4535
134 Ga0496109_0061389 3300048912 Bacteria 3436
135 Ga0496109_0153118 3300048912 Bacteria 2159
136 Ga0496110_0021397 3300048913 Bacteria 5475
137 Ga0496111_0019760 3300048914 Bacteria 4685
138 Ga0496111_0035933 3300048914 Bacteria 3543
139 Ga0496113_0015451 3300048916 Bacteria 5247
140 Ga0496113_0071411 3300048916 Bacteria 2640
141 Ga0496114_0001385 3300048917 Bacteria 18370
142 Ga0496114_0016812 3300048917 Bacteria 5899
143 Ga0496114_0019646 3300048917 Bacteria 5475
144 Ga0496114_0020210 3300048917 Bacteria 5404
145 Ga0496114_0241892 3300048917 Bacteria 1587
146 Ga0496115_0004700 3300048918 Bacteria 9900
147 Ga0496115_0053826 3300048918 Bacteria 3231
148 Ga0501031_0036170 3300049568 Bacteria 3221
149 Ga0501036_0056070 3300049572 Bacteria 3338
150 Ga0501038_0015917 3300049574 Bacteria 6834
151 Ga0501038_0027396 3300049574 Bacteria 5070
152 Ga0501039_0003311 3300049575 Bacteria 12047
153 Ga0501040_0001926 3300049576 Bacteria 13346
154 Ga0501040_0024851 3300049576 Bacteria 4025
155 Ga0501040_0076097 3300049576 Bacteria 2321
156 Ga0501041_0017010 3300049577 Bacteria 4327
157 Ga0501041_0017379 3300049577 Bacteria 4281
158 Ga0501042_0072916 3300049578 Bacteria 2456
159 Ga0501048_0032228 3300049582 Bacteria 3788
160 Ga0501048_0034548 3300049582 Bacteria 3646
161 Ga0501067_0003808 3300049583 Bacteria 8321
162 Ga0501068_0024481 3300049584 Bacteria 3546
163 Ga0501069_0015732 3300049585 Bacteria 4055
164 Ga0501070_0001005 3300049586 Bacteria 25286
165 Ga0501070_0057957 3300049586 Bacteria 3211
166 Ga0501071_0004675 3300049587 Bacteria 8699
167 Ga0501072_0025345 3300049588 Bacteria 4620
168 Ga0501072_0038719 3300049588 Bacteria 3742
169 Ga0501073_0072382 3300049589 Bacteria 2401
170 Ga0501074_0036642 3300049590 Bacteria 3553
171 Ga0501074_0106805 3300049590 Bacteria 2004
172 Ga0501075_0056121 3300049591 Bacteria 2965
173 Ga0501076_0011913 3300049592 Bacteria 6494
174 Ga0501077_0038548 3300049593 Bacteria 3043
175 Ga0501080_0053130 3300049742 Bacteria 3772
176 Ga0501080_0093138 3300049742 Bacteria 2798
177 Ga0501081_0091479 3300049743 Bacteria 2140
178 Ga0501045_0023277 3300049824 Bacteria 4440
179 Ga0501045_0041547 3300049824 Bacteria 3346
180 nmdc:mga03n38_24611_c1 3300050490 Bacteria 2463
181 nmdc:mga00v17_110608_c1 3300050491 Bacteria 1743
182 nmdc:mga00v17_69774_c1 3300050491 Bacteria 2176
183 nmdc:mga0yw44_23984_c1 3300050492 Bacteria 3445
184 nmdc:mga0yw44_56864_c1 3300050492 Bacteria 2385
185 nmdc:mga06z11_7819_c1 3300050494 Bacteria 4423
186 nmdc:mga06z11_88877_c1 3300050494 Bacteria 1674
187 nmdc:mga06z11_94389_c1 3300050494 Bacteria 1630
188 nmdc:mga07m45_20555_c1 3300050496 Bacteria 3587
189 nmdc:mga07m45_51644_c1 3300050496 Bacteria 2319
190 nmdc:mga05p37_17050_c1 3300050507 Bacteria 8761
191 nmdc:mga05p37_405_c1 3300050507 Bacteria 46764
192 nmdc:mga09592_81060_c1 3300050508 Bacteria 2765
193 nmdc:mga0qj67_68078_c1 3300050509 Bacteria 2838
194 nmdc:mga0qj67_72111_c1 3300050509 Bacteria 2757
195 nmdc:mga06r32_11942_c1 3300050510 Bacteria 7828
196 nmdc:mga06r32_311902_c1 3300050510 Bacteria 1559
197 nmdc:mga08y16_102632_c1 3300050511 Bacteria 2978
198 Ga0500644_0000054 3300053088 Bacteria 69110
199 Ga0500654_075781 3300053099 Bacteria 1605
200 Ga0501084_0076010 3300054114 Bacteria 2814
201 Ga0501082_0047614 3300060353 Bacteria 3695
202 Ga0530510_0009560 3300061734 Bacteria 6800
203 Ga0530510_0040477 3300061734 Bacteria 3363
204 2644230979 2643221641 Bacteria 4490190
205 2740166308 2739367898 Bacteria 4367674
206 2774394189 2773857762 Bacteria 5971770
207 2809194955 2808606439 Bacteria 5952208
208 2812349859 2811994878 Bacteria 5992952
209 2816427915 2816332119 Bacteria 8120218
210 2855389431 2855386786 Bacteria 4752232
211 2857484146 2857481737 Bacteria 4761446
212 2891972566 2891968417 Bacteria 5821697
213 8054610193 8054609563 Bacteria 5170090
214 Ga0439431_0002295
215 Ga0070658_10095222
216 Ga0070683_100173602
217 Ga0070682_100018860
218 Ga0070675_100045442
219 Ga0070674_100020078
220 Ga0070659_100132038
221 Ga0070667_100048745
222 Ga0070714_100001548
223 Ga0070700_100002442
224 Ga0070700_100010207
225 Ga0070678_100099095
226 Ga0068867_100056091
227 Ga0070698_100027045
228 Ga0070679_100036594
229 Ga0070684_100048446
230 Ga0070665_100198506
231 Ga0070664_100087939
232 Ga0068857_100135906
233 Ga0068852_100217815
234 Ga0068864_100001246
235 Ga0068861_100019255
236 Ga0068860_100003029
237 Ga0081455_10000335
238 Ga0081455_10066497
239 Ga0081539_10033206
240 Ga0075365_10003137
241 Ga0075365_10012183
242 Ga0075365_10019648
243 Ga0075365_10019714
244 Ga0075368_10002440
245 Ga0075368_10015845
246 Ga0075363_100001067
247 Ga0075363_100017798
248 Ga0075363_100046830
249 Ga0075363_100067557
250 Ga0075364_10008117
251 Ga0075364_10019590
252 Ga0075364_10040392
253 Ga0075367_10001374
254 Ga0075367_10069575
255 Ga0075367_10112228
256 Ga0075370_10006134
257 Ga0075428_100000084
258 Ga0075428_100003777
259 Ga0075428_100103710
260 Ga0075430_100002022
261 Ga0075430_100025192
262 Ga0075431_100008538
263 Ga0075431_100080782
264 Ga0075429_100002536
265 Ga0075429_100062319
266 Ga0111539_10013847
267 Ga0111539_10042701
268 Ga0114129_10003871
269 Ga0114129_10044526
270 Ga0105243_10062990
271 Ga0105242_10209875
272 Ga0105248_10095187
273 Ga0105237_10055996
274 Ga0105249_10210999
275 Ga0157369_10038714
276 Ga0163162_10008527
277 Ga0157375_10215270
278 Ga0207642_10010474
279 Ga0207647_10004862
280 Ga0207647_10061693
281 Ga0207707_10093032
282 Ga0207657_10019981
283 Ga0207657_10105050
284 Ga0207652_10040686
285 Ga0207664_10007545
286 Ga0207709_10078485
287 Ga0207704_10026330
288 Ga0207704_10026902
289 Ga0207658_10048351
290 Ga0207708_10000977
291 Ga0207708_10078055
292 Ga0207702_10113653
293 Ga0207702_10215839
294 Ga0207648_10002802
295 Ga0207683_10119137
296 Ga0207698_10056175
297 Ga0207698_10083704
298 Ga0207698_10209977
299 Ga0268266_10157021
300 Ga0268264_10002196
301 Ga0307413_10005674
302 Ga0307410_10005846
303 Ga0307407_10004372
304 Ga0307407_10034023
305 Ga0307409_100015244
306 Ga0307409_100053203
307 Ga0307416_100337009
308 Ga0307414_10174062
309 Ga0307415_100003636
310 Ga0307415_100077315
311 Ga0395899_0011723
312 Ga0395899_0031102
313 Ga0395900_0125068
314 Ga0395898_0066518
315 Ga0395905_0048592
316 Ga0436364_0136021
317 Ga0395901_0132863
318 Ga0439445_0011406
319 Ga0466966_0019828
320 Ga0466961_0005548
321 Ga0466961_0006235
322 Ga0466961_0127813
323 Ga0466963_0010576
324 Ga0466964_0043286
325 Ga0466957_0015045
326 Ga0466959_0006536
327 Ga0466967_0043428
328 Ga0466967_0065175
329 Ga0466967_0074924
330 Ga0466967_0201869
331 Ga0495629_0131661
332 Ga0495582_0066868
333 Ga0495657_0043969
334 Ga0495593_0026990
335 Ga0496101_0053740
336 Ga0496102_0019982
337 Ga0496102_0045179
338 Ga0496104_0013000
339 Ga0496105_0000893
340 Ga0496106_0005530
341 Ga0496107_0006972
342 Ga0496107_0052896
343 Ga0496108_0007825
344 Ga0496108_0106272
345 Ga0496108_0125207
346 Ga0496109_0034882
347 Ga0496109_0061389
348 Ga0496109_0153118
349 Ga0496110_0021397
350 Ga0496111_0019760
351 Ga0496111_0035933
352 Ga0496113_0015451
353 Ga0496113_0071411
354 Ga0496114_0001385
355 Ga0496114_0016812
356 Ga0496114_0019646
357 Ga0496114_0020210
358 Ga0496114_0241892
359 Ga0496115_0004700
360 Ga0496115_0053826
361 Ga0501031_0036170
362 Ga0501036_0056070
363 Ga0501038_0015917
364 Ga0501038_0027396
365 Ga0501039_0003311
366 Ga0501040_0001926
367 Ga0501040_0024851
368 Ga0501040_0076097
369 Ga0501041_0017010
370 Ga0501041_0017379
371 Ga0501042_0072916
372 Ga0501048_0032228
373 Ga0501048_0034548
374 Ga0501067_0003808
375 Ga0501068_0024481
376 Ga0501069_0015732
377 Ga0501070_0001005
378 Ga0501070_0057957
379 Ga0501071_0004675
380 Ga0501072_0025345
381 Ga0501072_0038719
382 Ga0501073_0072382
383 Ga0501074_0036642
384 Ga0501074_0106805
385 Ga0501075_0056121
386 Ga0501076_0011913
387 Ga0501077_0038548
388 Ga0501080_0053130
389 Ga0501080_0093138
390 Ga0501081_0091479
391 Ga0501045_0023277
392 Ga0501045_0041547
393 nmdc:mga03n38_24611_c1
394 nmdc:mga00v17_110608_c1
395 nmdc:mga00v17_69774_c1
396 nmdc:mga0yw44_23984_c1
397 nmdc:mga0yw44_56864_c1
398 nmdc:mga06z11_7819_c1
399 nmdc:mga06z11_88877_c1
400 nmdc:mga06z11_94389_c1
401 nmdc:mga07m45_20555_c1
402 nmdc:mga07m45_51644_c1
403 nmdc:mga05p37_17050_c1
404 nmdc:mga05p37_405_c1
405 nmdc:mga09592_81060_c1
406 nmdc:mga0qj67_68078_c1
407 nmdc:mga0qj67_72111_c1
408 nmdc:mga06r32_11942_c1
409 nmdc:mga06r32_311902_c1
410 nmdc:mga08y16_102632_c1
411 Ga0500644_0000054
412 Ga0500654_075781
413 Ga0501084_0076010
414 Ga0501082_0047614
415 Ga0530510_0009560
416 Ga0530510_0040477
417 2644230979
418 2740166308
419 2774394189
420 2809194955
421 2812349859
422 2816427915
423 2855389431
424 2857484146
425 2891972566
426 8054610193

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13941

MutL

MutL protein

16

472

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
5czz-assembly1.cif.gz_A crystal structure of staphylococcus aureus cas9 in complex with sgrna and target dna (ttgaat pam) 0.8823 5 36
7el1-assembly1.cif.gz_A structure of a protein from bacteria 0.8726 5 36
6rjg-assembly1.cif.gz_C cryo-em structure of st1cas9-sgrna-acriia6-tdna59-ntpam complex. 0.8719 6 36
7pal-assembly1.cif.gz_n 70s ribosome with a- and p-site trnas in mycoplasma pneumoniae cells 0.8625 4 34
6m0v-assembly1.cif.gz_A crsytal structure of streptococcus thermophilus cas9 in complex with the ggaa pam 0.8533 4 36
ID Description Score Start End Superfamily
af_E9P851_289_424_2.60.40.150 Mainly Beta;Sandwich;Immunoglobulin-like;C2 domain 0.8929 15 36 2.60.40.150
af_G5ECP7_14_279_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.8756 5 36 2.130.10.10
af_G5ECP7_7_301_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.8756 5 36 2.130.10.10
af_Q9LJX6_65_185_3.30.420.100 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5; 0.8596 4 34 3.30.420.100
af_Q2G105_44_121_3.10.450.40 Alpha Beta;Roll;Nuclear Transport Factor 2; Chain: A,; 0.8552 14 36 3.10.450.40
ID Description Score Start End GO Terms
AF-A0A7C6ULA9-F1-model_v4 MutL protein 0.8426 278 411
AF-A0A7V9GWX2-F1-model_v4 Glutamate mutase L 0.8399 228 427
AF-A0A645H4E3-F1-model_v4 MutL C-terminal dimerisation domain-containing protein 0.8369 258 428
AF-A0A3C1YP31-F1-model_v4 Hydantoinase 0.8285 6 76 GO:0005829
GO:0006749
GO:0017168
AF-A0A7Y5T8K0-F1-model_v4 Glutamate mutase 0.8279 329 427

Map