F324247

General Info

Members Datasets Scaffolds Average Seq Length
213 131 426 264

Family's Representative Sequence

Representative Sequence 3300035398|Ga0316574_0182902|Ga0316574_0182902_336_1187
Length 283
Sequence MQNDWPSLKSNSSAGQCIRNHAMRLKQYQVDAFATRVFEGNPAAVCPLDHWLDDSLLQAIANENNLSETAFFVPSEKGFHLRWFTPVAEVDLCGHATLATAHVLFSILGYSGKQITFQTRSGELVVESINGMLTMNFPARPPALRPIPDALVSGLGRTPVEVWTANDYIAVFEDEDTVRSISPDFAKLQELDLRGVIVTAPGTDVDFVSRFFAPKIGIPEDPVTGAAHCELTPYWAQRLGKSSFEARQVSPRGGRLSCELQGNRVVLSGTAVTFMIGEIDLGD

Samples

Sample ID Description Type Environment
1 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
6 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
11 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
12 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
13 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
14 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
15 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
16 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
17 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
18 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
19 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
20 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
21 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
22 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
23 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
24 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
25 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
26 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
27 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
28 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
29 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
30 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
31 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
32 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
33 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
34 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
54 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
55 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
56 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
57 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
58 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
59 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
60 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
61 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
62 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
63 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
64 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
65 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
66 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
67 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
68 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
69 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
70 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
71 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
72 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
73 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
74 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
75 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
76 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
77 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
78 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
79 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
80 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
81 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
82 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
83 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
84 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
85 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
86 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
87 3300042142 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913L_E14_072516_1610 Metagenome Rhizosphere
88 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
89 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
90 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
91 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
92 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
93 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
94 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
95 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
96 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
97 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
98 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
99 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
100 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
101 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
102 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
103 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
104 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
105 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
106 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
107 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
108 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
109 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
110 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
112 3300049677 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_A_3_control Metagenome Rhizosphere
113 3300049760 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F12_A_4_control Metagenome Rhizosphere
114 3300049767 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A15_B_4_drought Metagenome Rhizosphere
115 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
116 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
117 3300053135 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 endosphere Metagenome Endosphere
118 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
119 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
120 2511231024 Pseudomonas sp. GM84 Isolate Nodule
121 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
122 2765235841 Pseudomonas putida AA7 Isolate Unclassified
123 2775506925 Saccharopolyspora phatthalungensis NRRL B-24798 Isolate Rhizosphere
124 2806310737 Pseudomonas mosselii BS011 Isolate Unclassified
125 2806310745 Pseudomonas mosselii PtA1 Isolate Unclassified
126 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
127 3007803356 Pseudomonas sp. CM27 Isolate Unclassified
128 8052494512 Pseudomonas putida LD6 Isolate Unclassified
129 8054929484 Pseudomonas vlassakiae RW4S1 Isolate Rhizosphere
130 8056120720 Pseudomonas maumuensis COW77 Isolate Rhizosphere
131 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.37
Metatranscriptomes 0
Isolates 5.63

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.82
Nodule 1.41
Rhizoplane 1.88
Rhizosphere 80.28
Stem 0
Stem Tuber 0
Unclassified 5.16

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316574_0182902 3300035398 Bacteria 1348
2 SwRhRL2b_contig_752160 2162886007 Bacteria 914
3 Ga0065704_10009520 3300005289 Bacteria 4701
4 Ga0065704_10101531 3300005289 Bacteria 2235
5 Ga0065704_10173851 3300005289 Unclassified 1275
6 Ga0070680_100178389 3300005336 Bacteria 1789
7 Ga0070680_100189291 3300005336 Bacteria 1734
8 Ga0070661_100091623 3300005344 Bacteria 2251
9 Ga0070669_100417774 3300005353 Bacteria 1100
10 Ga0070659_100148957 3300005366 Bacteria 1908
11 Ga0070662_100224909 3300005457 Unclassified 1499
12 Ga0070662_100317710 3300005457 Bacteria 1269
13 Ga0070681_10030912 3300005458 Bacteria 5374
14 Ga0070681_10042589 3300005458 Bacteria 4549
15 Ga0070681_10132945 3300005458 Bacteria 2419
16 Ga0070679_100102676 3300005530 Bacteria 2845
17 Ga0070679_100127841 3300005530 Bacteria 2523
18 Ga0068853_100020487 3300005539 Bacteria 5500
19 Ga0068853_100124128 3300005539 Bacteria 2305
20 Ga0070664_100034217 3300005564 Bacteria 4261
21 Ga0068857_100015878 3300005577 Bacteria 6590
22 Ga0068857_100230814 3300005577 Bacteria 1693
23 Ga0068857_100357956 3300005577 Bacteria 1352
24 Ga0068854_100133319 3300005578 Bacteria 1899
25 Ga0068854_100186341 3300005578 Bacteria 1624
26 Ga0068863_100039017 3300005841 Bacteria 4519
27 Ga0081455_10001184 3300005937 Bacteria 32671
28 Ga0070717_10082286 3300006028 Bacteria 2705
29 Ga0075363_100141517 3300006048 Bacteria 1355
30 Ga0097621_100004514 3300006237 Bacteria 9704
31 Ga0068871_100069078 3300006358 Bacteria 2901
32 Ga0099823_1000543 3300006944 Bacteria 25860
33 Ga0105251_10007183 3300009011 Bacteria 6919
34 Ga0105251_10073530 3300009011 Bacteria 1588
35 Ga0105244_10000378 3300009036 Bacteria 41394
36 Ga0105244_10003250 3300009036 Bacteria 11732
37 Ga0105244_10012282 3300009036 Bacteria 5068
38 Ga0105244_10023186 3300009036 Bacteria 3406
39 Ga0105250_10029789 3300009092 Bacteria 2195
40 Ga0105240_10129284 3300009093 Bacteria 3031
41 Ga0105243_10016224 3300009148 Bacteria 5636
42 Ga0105243_10118386 3300009148 Bacteria 2229
43 Ga0105241_10321915 3300009174 Bacteria 1334
44 Ga0105241_10426023 3300009174 Bacteria 1169
45 Ga0105242_10074370 3300009176 Unclassified 2827
46 Ga0105237_10354473 3300009545 Bacteria 1472
47 Ga0105239_10169232 3300010375 Bacteria 2443
48 Ga0157373_10092249 3300013100 Bacteria 2133
49 Ga0157372_10025788 3300013307 Bacteria 6393
50 Ga0157372_10053314 3300013307 Bacteria 4508
51 Ga0157372_10116554 3300013307 Bacteria 3063
52 Ga0209676_1012368 3300025292 Bacteria 3359
53 Ga0207696_1000010 3300025711 Bacteria 534681
54 Ga0207696_1005352 3300025711 Bacteria 5336
55 Ga0207696_1008299 3300025711 Bacteria 3989
56 Ga0207696_1009970 3300025711 Bacteria 3510
57 Ga0207655_1000461 3300025728 Bacteria 53372
58 Ga0207655_1000645 3300025728 Bacteria 41696
59 Ga0207655_1013177 3300025728 Bacteria 4764
60 Ga0207655_1039540 3300025728 Bacteria 2046
61 Ga0207713_1003158 3300025735 Bacteria 11414
62 Ga0207713_1005447 3300025735 Bacteria 7966
63 Ga0207713_1009505 3300025735 Bacteria 5474
64 Ga0207647_10229481 3300025904 Unclassified 1068
65 Ga0207654_10400285 3300025911 Bacteria 954
66 Ga0207707_10021592 3300025912 Bacteria 5625
67 Ga0207707_10031474 3300025912 Bacteria 4642
68 Ga0207707_10135780 3300025912 Bacteria 2151
69 Ga0207660_10242221 3300025917 Bacteria 1421
70 Ga0207660_10250099 3300025917 Bacteria 1399
71 Ga0207657_10045724 3300025919 Bacteria 3839
72 Ga0207690_10072294 3300025932 Bacteria 2382
73 Ga0207706_10279910 3300025933 Unclassified 1455
74 Ga0207686_10111139 3300025934 Unclassified 1849
75 Ga0207709_10035311 3300025935 Bacteria 2954
76 Ga0207709_10052535 3300025935 Bacteria 2504
77 Ga0207661_10295137 3300025944 Bacteria 1452
78 Ga0207679_10029475 3300025945 Bacteria 3822
79 Ga0207679_10180628 3300025945 Bacteria 1745
80 Ga0207667_10137327 3300025949 Bacteria 2517
81 Ga0207640_10158961 3300025981 Bacteria 1669
82 Ga0207640_10309710 3300025981 Bacteria 1253
83 Ga0207640_10360531 3300025981 Unclassified 1171
84 Ga0207639_10029936 3300026041 Bacteria 3990
85 Ga0207639_10200365 3300026041 Bacteria 1711
86 Ga0207641_10088875 3300026088 Bacteria 2699
87 Ga0207674_10012601 3300026116 Bacteria 9450
88 Ga0207674_10097951 3300026116 Bacteria 2916
89 Ga0207674_10195548 3300026116 Bacteria 1972
90 Ga0209389_1000018 3300027296 Bacteria 179898
91 Ga0209371_1000369 3300027312 Bacteria 48517
92 Ga0268256_1000314 3300030500 Bacteria 48518
93 Ga0307408_100250721 3300031548 Bacteria 1460
94 Ga0316575_10154474 3300031665 Bacteria 947
95 Ga0316579_10013263 3300031691 Bacteria 3543
96 Ga0316579_10034428 3300031691 Bacteria 2331
97 Ga0316579_10061191 3300031691 Unclassified 1772
98 Ga0316579_10106796 3300031691 Bacteria 1342
99 Ga0316576_10005738 3300031727 Bacteria 7639
100 Ga0316576_10130562 3300031727 Bacteria 1890
101 Ga0316578_10056508 3300031728 Bacteria 2305
102 Ga0307405_10007094 3300031731 Bacteria 5571
103 Ga0307405_10105927 3300031731 Bacteria 1895
104 Ga0316577_10043536 3300031733 Bacteria 2512
105 Ga0316577_10212572 3300031733 Bacteria 1093
106 Ga0316577_10302699 3300031733 Bacteria 906
107 Ga0307413_10060285 3300031824 Bacteria 2335
108 Ga0307413_10076569 3300031824 Bacteria 2127
109 Ga0307413_10106168 3300031824 Bacteria 1868
110 Ga0307413_10391859 3300031824 Bacteria 1085
111 Ga0307410_10034976 3300031852 Bacteria 3259
112 Ga0307410_10383373 3300031852 Unclassified 1131
113 Ga0307406_10325137 3300031901 Bacteria 1191
114 Ga0307407_10000765 3300031903 Bacteria 10571
115 Ga0307407_10003869 3300031903 Bacteria 6240
116 Ga0307407_10031198 3300031903 Bacteria 2883
117 Ga0307412_10042934 3300031911 Bacteria 2942
118 Ga0307412_10047255 3300031911 Bacteria 2826
119 Ga0307409_100001085 3300031995 Bacteria 12843
120 Ga0307409_100133159 3300031995 Bacteria 2128
121 Ga0307409_100215650 3300031995 Bacteria 1728
122 Ga0307416_100057534 3300032002 Bacteria 3146
123 Ga0307416_100127815 3300032002 Bacteria 2280
124 Ga0307416_100154980 3300032002 Bacteria 2108
125 Ga0307416_100882962 3300032002 Bacteria 993
126 Ga0307414_10015287 3300032004 Bacteria 4631
127 Ga0307414_10062368 3300032004 Bacteria 2645
128 Ga0307414_10158360 3300032004 Bacteria 1795
129 Ga0307411_10010284 3300032005 Bacteria 4977
130 Ga0307411_10071444 3300032005 Bacteria 2352
131 Ga0307411_10107908 3300032005 Bacteria 1985
132 Ga0307415_100014883 3300032126 Bacteria 4590
133 Ga0307415_100328101 3300032126 Bacteria 1279
134 Ga0316583_10000708 3300032133 Bacteria 10330
135 Ga0316580_10042419 3300032139 Bacteria 1404
136 Ga0316574_0006669 3300035398 Bacteria 6264
137 Ga0316574_0007497 3300035398 Bacteria 5983
138 Ga0316574_0335478 3300035398 Bacteria 958
139 Ga0316582_0231974 3300036647 Bacteria 1263
140 Ga0316584_0188647 3300036712 Bacteria 1525
141 Ga0316584_0459453 3300036712 Bacteria 899
142 Ga0395898_0176804 3300037466 Unclassified 2040
143 Ga0316581_0002956 3300037588 Bacteria 4168
144 Ga0436364_0337058 3300037853 Bacteria 11831
145 Ga0436364_0600719 3300037853 Bacteria 3894
146 Ga0395901_0376692 3300038443 Bacteria 1461
147 Ga0400484_11270 3300038725 Bacteria 8311
148 Ga0400484_30999 3300038725 Bacteria 1480
149 Ga0400487_10523 3300039110 Bacteria 24811
150 Ga0436365_1796714 3300039437 Bacteria 6282
151 Ga0436362_0180426 3300039453 Bacteria 3002
152 Ga0439432_001805 3300042006 Bacteria 8027
153 Ga0450902_000522 3300042137 Bacteria 4823
154 Ga0450905_000118 3300042142 Bacteria 8004
155 Ga0450905_010643 3300042142 Bacteria 1276
156 Ga0453684_0102524 3300044712 Bacteria 3499
157 Ga0466967_0016296 3300045976 Bacteria 5856
158 Ga0466967_0472318 3300045976 Unclassified 1228
159 Ga0495608_0007461 3300046511 Bacteria 7722
160 Ga0495620_0000200 3300046515 Bacteria 45504
161 Ga0495628_0013686 3300046516 Bacteria 6817
162 Ga0495643_0000451 3300046522 Bacteria 52778
163 Ga0495643_0000488 3300046522 Bacteria 50207
164 Ga0495648_0001343 3300046524 Bacteria 24306
165 Ga0495667_0000395 3300046559 Bacteria 27848
166 Ga0495588_0148237 3300046674 Bacteria 1240
167 Ga0495672_0027408 3300047320 Bacteria 3621
168 Ga0495615_0002730 3300048090 Bacteria 2863
169 Ga0495615_0011353 3300048090 Bacteria 1807
170 Ga0496102_0186819 3300048905 Bacteria 1953
171 Ga0496111_0370657 3300048914 Bacteria 1059
172 Ga0496114_0008488 3300048917 Bacteria 8141
173 Ga0496114_0009622 3300048917 Bacteria 7677
174 Ga0496117_0002915 3300048920 Bacteria 20699
175 Ga0496117_0009011 3300048920 Bacteria 9388
176 Ga0496117_0012193 3300048920 Bacteria 7605
177 Ga0496118_0002410 3300048921 Bacteria 25234
178 Ga0496118_0005881 3300048921 Bacteria 13745
179 Ga0496119_0065423 3300048922 Bacteria 2153
180 Ga0496121_0160574 3300048924 Bacteria 1644
181 Ga0496122_0001401 3300048925 Bacteria 39147
182 Ga0496122_0107708 3300048925 Bacteria 1840
183 Ga0496123_0000437 3300048926 Bacteria 74882
184 Ga0496123_0062032 3300048926 Bacteria 2398
185 Ga0496124_0003787 3300048927 Bacteria 18167
186 Ga0496124_0004408 3300048927 Bacteria 16421
187 Ga0496124_0037387 3300048927 Bacteria 4222
188 Ga0496124_0090969 3300048927 Bacteria 2487
189 Ga0496125_0000861 3300048928 Bacteria 48649
190 Ga0496125_0014107 3300048928 Bacteria 7803
191 Ga0496125_0025624 3300048928 Bacteria 5395
192 Ga0501034_0000084 3300049571 Bacteria 168283
193 Ga0501072_0003040 3300049588 Bacteria 12654
194 Ga0501247_009512 3300049677 Bacteria 1147
195 Ga0501263_000927 3300049760 Bacteria 2544
196 Ga0501270_008109 3300049767 Bacteria 1320
197 nmdc:mga08y16_96476_c1 3300050511 Bacteria 3079
198 Ga0500607_009475 3300053121 Bacteria 5855
199 Ga0500659_0001721 3300053135 Bacteria 13666
200 Ga0500636_0000046 3300053177 Bacteria 63059
201 Ga0500637_0006403 3300053178 Bacteria 5794
202 2511376186 2511231024 Bacteria 5835885
203 2676497123 2675903060 Bacteria 10051191
204 2765582825 2765235841 Bacteria 6137024
205 2776376386 2775506925 Bacteria 7237746
206 2807407407 2806310737 Bacteria 5751088
207 2807455735 2806310745 Bacteria 5742165
208 2863069328 2863067949 Bacteria 8541735
209 3007803604 3007803356 Bacteria 5931491
210 8052498443 8052494512 Bacteria 5765634
211 8054930090 8054929484 Bacteria 5599761
212 8056124425 8056120720 Bacteria 5758328
213 8056209377 8056207758 Bacteria 8639239
214 Ga0316574_0182902
215 SwRhRL2b_contig_752160
216 Ga0065704_10009520
217 Ga0065704_10101531
218 Ga0065704_10173851
219 Ga0070680_100178389
220 Ga0070680_100189291
221 Ga0070661_100091623
222 Ga0070669_100417774
223 Ga0070659_100148957
224 Ga0070662_100224909
225 Ga0070662_100317710
226 Ga0070681_10030912
227 Ga0070681_10042589
228 Ga0070681_10132945
229 Ga0070679_100102676
230 Ga0070679_100127841
231 Ga0068853_100020487
232 Ga0068853_100124128
233 Ga0070664_100034217
234 Ga0068857_100015878
235 Ga0068857_100230814
236 Ga0068857_100357956
237 Ga0068854_100133319
238 Ga0068854_100186341
239 Ga0068863_100039017
240 Ga0081455_10001184
241 Ga0070717_10082286
242 Ga0075363_100141517
243 Ga0097621_100004514
244 Ga0068871_100069078
245 Ga0099823_1000543
246 Ga0105251_10007183
247 Ga0105251_10073530
248 Ga0105244_10000378
249 Ga0105244_10003250
250 Ga0105244_10012282
251 Ga0105244_10023186
252 Ga0105250_10029789
253 Ga0105240_10129284
254 Ga0105243_10016224
255 Ga0105243_10118386
256 Ga0105241_10321915
257 Ga0105241_10426023
258 Ga0105242_10074370
259 Ga0105237_10354473
260 Ga0105239_10169232
261 Ga0157373_10092249
262 Ga0157372_10025788
263 Ga0157372_10053314
264 Ga0157372_10116554
265 Ga0209676_1012368
266 Ga0207696_1000010
267 Ga0207696_1005352
268 Ga0207696_1008299
269 Ga0207696_1009970
270 Ga0207655_1000461
271 Ga0207655_1000645
272 Ga0207655_1013177
273 Ga0207655_1039540
274 Ga0207713_1003158
275 Ga0207713_1005447
276 Ga0207713_1009505
277 Ga0207647_10229481
278 Ga0207654_10400285
279 Ga0207707_10021592
280 Ga0207707_10031474
281 Ga0207707_10135780
282 Ga0207660_10242221
283 Ga0207660_10250099
284 Ga0207657_10045724
285 Ga0207690_10072294
286 Ga0207706_10279910
287 Ga0207686_10111139
288 Ga0207709_10035311
289 Ga0207709_10052535
290 Ga0207661_10295137
291 Ga0207679_10029475
292 Ga0207679_10180628
293 Ga0207667_10137327
294 Ga0207640_10158961
295 Ga0207640_10309710
296 Ga0207640_10360531
297 Ga0207639_10029936
298 Ga0207639_10200365
299 Ga0207641_10088875
300 Ga0207674_10012601
301 Ga0207674_10097951
302 Ga0207674_10195548
303 Ga0209389_1000018
304 Ga0209371_1000369
305 Ga0268256_1000314
306 Ga0307408_100250721
307 Ga0316575_10154474
308 Ga0316579_10013263
309 Ga0316579_10034428
310 Ga0316579_10061191
311 Ga0316579_10106796
312 Ga0316576_10005738
313 Ga0316576_10130562
314 Ga0316578_10056508
315 Ga0307405_10007094
316 Ga0307405_10105927
317 Ga0316577_10043536
318 Ga0316577_10212572
319 Ga0316577_10302699
320 Ga0307413_10060285
321 Ga0307413_10076569
322 Ga0307413_10106168
323 Ga0307413_10391859
324 Ga0307410_10034976
325 Ga0307410_10383373
326 Ga0307406_10325137
327 Ga0307407_10000765
328 Ga0307407_10003869
329 Ga0307407_10031198
330 Ga0307412_10042934
331 Ga0307412_10047255
332 Ga0307409_100001085
333 Ga0307409_100133159
334 Ga0307409_100215650
335 Ga0307416_100057534
336 Ga0307416_100127815
337 Ga0307416_100154980
338 Ga0307416_100882962
339 Ga0307414_10015287
340 Ga0307414_10062368
341 Ga0307414_10158360
342 Ga0307411_10010284
343 Ga0307411_10071444
344 Ga0307411_10107908
345 Ga0307415_100014883
346 Ga0307415_100328101
347 Ga0316583_10000708
348 Ga0316580_10042419
349 Ga0316574_0006669
350 Ga0316574_0007497
351 Ga0316574_0335478
352 Ga0316582_0231974
353 Ga0316584_0188647
354 Ga0316584_0459453
355 Ga0395898_0176804
356 Ga0316581_0002956
357 Ga0436364_0337058
358 Ga0436364_0600719
359 Ga0395901_0376692
360 Ga0400484_11270
361 Ga0400484_30999
362 Ga0400487_10523
363 Ga0436365_1796714
364 Ga0436362_0180426
365 Ga0439432_001805
366 Ga0450902_000522
367 Ga0450905_000118
368 Ga0450905_010643
369 Ga0453684_0102524
370 Ga0466967_0016296
371 Ga0466967_0472318
372 Ga0495608_0007461
373 Ga0495620_0000200
374 Ga0495628_0013686
375 Ga0495643_0000451
376 Ga0495643_0000488
377 Ga0495648_0001343
378 Ga0495667_0000395
379 Ga0495588_0148237
380 Ga0495672_0027408
381 Ga0495615_0002730
382 Ga0495615_0011353
383 Ga0496102_0186819
384 Ga0496111_0370657
385 Ga0496114_0008488
386 Ga0496114_0009622
387 Ga0496117_0002915
388 Ga0496117_0009011
389 Ga0496117_0012193
390 Ga0496118_0002410
391 Ga0496118_0005881
392 Ga0496119_0065423
393 Ga0496121_0160574
394 Ga0496122_0001401
395 Ga0496122_0107708
396 Ga0496123_0000437
397 Ga0496123_0062032
398 Ga0496124_0003787
399 Ga0496124_0004408
400 Ga0496124_0037387
401 Ga0496124_0090969
402 Ga0496125_0000861
403 Ga0496125_0014107
404 Ga0496125_0025624
405 Ga0501034_0000084
406 Ga0501072_0003040
407 Ga0501247_009512
408 Ga0501263_000927
409 Ga0501270_008109
410 nmdc:mga08y16_96476_c1
411 Ga0500607_009475
412 Ga0500659_0001721
413 Ga0500636_0000046
414 Ga0500637_0006403
415 2511376186
416 2676497123
417 2765582825
418 2776376386
419 2807407407
420 2807455735
421 2863069328
422 3007803604
423 8052498443
424 8054930090
425 8056124425
426 8056209377

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02567

PhzC-PhzF

Phenazine biosynthesis-like protein

30

277

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
1s7j-assembly2.cif.gz_B crystal structure of phenazine biosynthesis protein phzf family (enterococcus faecalis) 0.9506 1 262
1s7j-assembly2.cif.gz_B crystal structure of phenazine biosynthesis protein phzf family (enterococcus faecalis) 0.9471 1 262
4dun-assembly1.cif.gz_A-2 1.76a x-ray crystal structure of a putative phenazine biosynthesis phzc/phzf protein from clostridium difficile (strain 630) 0.9197 3 262
4dun-assembly1.cif.gz_A-2 1.76a x-ray crystal structure of a putative phenazine biosynthesis phzc/phzf protein from clostridium difficile (strain 630) 0.9131 3 262
3edn-assembly1.cif.gz_B crystal structure of the bacillus anthracis phenazine biosynthesis protein, phzf family 0.8766 1 262
ID Description Score Start End Superfamily
1s7jA01 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.9831 1 108 3.10.310.10
af_K7LH11_6_125_3.10.310.10 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.9669 5 108 3.10.310.10
1s7jB02 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.9617 119 248 3.10.310.10
af_A0A2R8Q0H1_145_280_3.10.310.10 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.9567 139 256 3.10.310.10
af_A0A2R8Q0H1_3_123_3.10.310.10 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.9553 5 117 3.10.310.10
ID Description Score Start End GO Terms
AF-A0A7C3KTL0-F1-model_v4 PhzF family phenazine biosynthesis protein 1.005 1 78 GO:0005737
GO:0009058
GO:0016853
AF-A0A528H453-F1-model_v4 PhzF family phenazine biosynthesis protein 1.004 6 72 GO:0005737
GO:0009058
GO:0016853
AF-A0A2R7MU49-F1-model_v4 deleted 1.002 1 80
AF-A0A849D728-F1-model_v4 PhzF family phenazine biosynthesis protein 1 5 83 GO:0005737
GO:0009058
GO:0016853
AF-A0A3M1UIW9-F1-model_v4 deleted 0.9999 1 95

Map