F323638

General Info

Members Datasets Scaffolds Average Seq Length
213 140 426 243

Family's Representative Sequence

Representative Sequence 3300005329|Ga0070683_100225235|Ga0070683_1002252353
Length 277
Sequence MVIPGKSSDTTVTDAAPRRRLVWRQAEVVGIVVETPRAKSVSLRVPGWPGHLPGQHVDVRLTADDGYQAQRSYSIASPPAGPGEGSDRIVLTIERIDDGEVSPFLTEELRAGDQIELRGPIGGYFTWTGAARRPLQLLAGGSGIVPLMAMLRTRARAAGPSPARLLYSSRTWATTIYRDELTRLAASDRSLTVVHALTRATPPQWTGQSRRVDGPMLRALAFPPEEAPEVFVCGPTPFVESVATLLVDWGHAAPAIKTERFGPTGGPPQEESDGPIG

Samples

Sample ID Description Type Environment
1 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
23 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
24 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
25 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
26 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
27 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
28 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
29 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
30 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
31 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
32 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
33 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
34 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
35 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
36 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
37 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
38 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
39 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
40 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
46 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
47 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
64 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
65 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
66 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
67 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
68 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
69 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
70 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
71 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
72 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
73 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
74 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
75 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
76 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
77 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
78 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
79 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
80 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
81 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
82 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
83 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
84 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
85 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
86 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
87 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
88 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
89 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
90 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
91 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
92 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
93 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
94 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
95 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
96 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
97 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
98 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
99 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
100 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
101 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
102 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
103 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
104 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
105 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
106 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
107 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
117 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
118 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
119 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
120 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
121 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
122 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
123 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
124 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
125 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
126 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
127 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
128 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
129 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
130 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
131 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
132 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
133 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
134 2731639228 Motilibacter peucedani DSM 45328 Isolate Rhizosphere
135 2824704595 Bradyrhizobium sp. HAMBI 2150 Isolate Unclassified
136 2824753945 Bradyrhizobium sp. HAMBI 2128 Isolate Unclassified
137 2824763712 Bradyrhizobium sp. HAMBI 2129 Isolate Unclassified
138 2904711408 Bradyrhizobium sp. USDA 3456 Isolate Unclassified
139 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
140 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.71
Metatranscriptomes 0
Isolates 3.29

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.47
Nodule 0
Rhizoplane 7.04
Rhizosphere 88.73
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_100225235 3300005329 Bacteria 1782
2 rootL2_10141531 3300003322 Bacteria 2021
3 JGI25407J50210_10000101 3300003373 Bacteria 11776
4 JGI25407J50210_10006675 3300003373 Bacteria 2880
5 Ga0070658_10488477 3300005327 Bacteria 1063
6 Ga0070683_100014215 3300005329 Bacteria 6956
7 Ga0070683_100018776 3300005329 Bacteria 6130
8 Ga0070683_100706184 3300005329 Bacteria 966
9 Ga0068868_100370929 3300005338 Bacteria 1230
10 Ga0068868_100637074 3300005338 Bacteria 948
11 Ga0070660_100212464 3300005339 Bacteria 1571
12 Ga0070660_100375104 3300005339 Bacteria 1174
13 Ga0070671_100213428 3300005355 Bacteria 1637
14 Ga0070688_100094735 3300005365 Bacteria 1958
15 Ga0070659_100202669 3300005366 Bacteria 1634
16 Ga0070667_100068561 3300005367 Bacteria 3018
17 Ga0070714_100000712 3300005435 Bacteria 23564
18 Ga0070714_100233725 3300005435 Bacteria 1694
19 Ga0070714_100271308 3300005435 Bacteria 1573
20 Ga0070713_100020866 3300005436 Bacteria 5030
21 Ga0070713_100567846 3300005436 Bacteria 1075
22 Ga0070710_10013102 3300005437 Bacteria 4140
23 Ga0070708_100027099 3300005445 Bacteria 4913
24 Ga0070708_100110699 3300005445 Bacteria 2524
25 Ga0070708_100492671 3300005445 Bacteria 1156
26 Ga0070678_100052028 3300005456 Bacteria 2971
27 Ga0070681_10001009 3300005458 Bacteria 23798
28 Ga0070681_10062739 3300005458 Bacteria 3690
29 Ga0070706_100021576 3300005467 Bacteria 5930
30 Ga0070706_100072440 3300005467 Bacteria 3188
31 Ga0070706_100362367 3300005467 Bacteria 1351
32 Ga0070698_100433759 3300005471 Bacteria 1249
33 Ga0070699_100045711 3300005518 Bacteria 3789
34 Ga0070699_100073103 3300005518 Bacteria 2983
35 Ga0070699_100141280 3300005518 Bacteria 2126
36 Ga0070684_100004129 3300005535 Bacteria 10992
37 Ga0070697_100021351 3300005536 Bacteria 5130
38 Ga0070693_100112680 3300005547 Bacteria 1676
39 Ga0068857_100575253 3300005577 Bacteria 1063
40 Ga0068854_100066436 3300005578 Bacteria 2625
41 Ga0070702_100318435 3300005615 Bacteria 1083
42 Ga0081455_10011283 3300005937 Bacteria 8991
43 Ga0081455_10090991 3300005937 Bacteria 2472
44 Ga0081455_10200587 3300005937 Bacteria 1494
45 Ga0081538_10000146 3300005981 Bacteria 73599
46 Ga0081538_10000488 3300005981 Bacteria 44314
47 Ga0081540_1000830 3300005983 Bacteria 28162
48 Ga0081540_1011396 3300005983 Bacteria 5944
49 Ga0081539_10002991 3300005985 Bacteria 22127
50 Ga0081539_10003455 3300005985 Bacteria 19379
51 Ga0070717_10033547 3300006028 Bacteria 4142
52 Ga0070717_10065279 3300006028 Bacteria 3025
53 Ga0070717_10293747 3300006028 Bacteria 1443
54 Ga0070715_10103925 3300006163 Bacteria 1330
55 Ga0070716_100314943 3300006173 Bacteria 1094
56 Ga0070712_100088438 3300006175 Bacteria 2263
57 Ga0070712_100373249 3300006175 Bacteria 1172
58 Ga0075428_100300776 3300006844 Bacteria 1725
59 Ga0075430_100114260 3300006846 Bacteria 2250
60 Ga0075434_100004273 3300006871 Bacteria 12816
61 Ga0075429_100001926 3300006880 Bacteria 17207
62 Ga0075435_100026674 3300007076 Bacteria 4511
63 Ga0099794_10058357 3300007265 Bacteria 1871
64 Ga0111539_10027145 3300009094 Bacteria 6993
65 Ga0111539_10563549 3300009094 Bacteria 1327
66 Ga0105245_10071275 3300009098 Bacteria 3156
67 Ga0114129_10092215 3300009147 Bacteria 4197
68 Ga0114129_10850584 3300009147 Bacteria 1160
69 Ga0105243_10112666 3300009148 Bacteria 2279
70 Ga0105239_11028839 3300010375 Bacteria 947
71 Ga0163163_10142503 3300014325 Bacteria 2439
72 Ga0157377_10198113 3300014745 Bacteria 1273
73 Ga0207710_10025870 3300025900 Bacteria 2534
74 Ga0207684_10042977 3300025910 Bacteria 3831
75 Ga0207684_10148002 3300025910 Bacteria 2020
76 Ga0207684_10294494 3300025910 Bacteria 1399
77 Ga0207707_10000459 3300025912 Bacteria 42211
78 Ga0207707_10434693 3300025912 Bacteria 1124
79 Ga0207693_10015501 3300025915 Bacteria 6115
80 Ga0207693_10091485 3300025915 Bacteria 2385
81 Ga0207663_10111261 3300025916 Bacteria 1858
82 Ga0207663_10569032 3300025916 Bacteria 887
83 Ga0207657_10247282 3300025919 Bacteria 1423
84 Ga0207700_10067598 3300025928 Bacteria 2736
85 Ga0207700_10120945 3300025928 Bacteria 2123
86 Ga0207700_10527243 3300025928 Bacteria 1047
87 Ga0207700_10801930 3300025928 Bacteria 842
88 Ga0207664_10447503 3300025929 Bacteria 1153
89 Ga0207709_10112911 3300025935 Bacteria 1820
90 Ga0207704_10378763 3300025938 Bacteria 1110
91 Ga0207665_10082689 3300025939 Bacteria 2213
92 Ga0207665_10273273 3300025939 Bacteria 1255
93 Ga0207665_10354795 3300025939 Bacteria 1108
94 Ga0207665_10425748 3300025939 Bacteria 1015
95 Ga0207661_10002154 3300025944 Bacteria 13560
96 Ga0207640_10243639 3300025981 Bacteria 1391
97 Ga0207683_10461204 3300026121 Bacteria 1172
98 Ga0207698_10191017 3300026142 Bacteria 1824
99 Ga0268266_10564155 3300028379 Bacteria 1092
100 Ga0307514_10091854 3300031649 Bacteria 2210
101 Ga0307405_10021395 3300031731 Bacteria 3635
102 Ga0307413_10000291 3300031824 Bacteria 15454
103 Ga0307410_10077604 3300031852 Bacteria 2322
104 Ga0307410_10292643 3300031852 Bacteria 1282
105 Ga0307407_10092852 3300031903 Bacteria 1854
106 Ga0307409_100020809 3300031995 Bacteria 4482
107 Ga0307409_100662377 3300031995 Bacteria 1039
108 Ga0307416_100329813 3300032002 Bacteria 1533
109 Ga0307416_100529201 3300032002 Bacteria 1248
110 Ga0307414_10068205 3300032004 Bacteria 2551
111 Ga0307414_10695997 3300032004 Bacteria 920
112 Ga0307411_10196332 3300032005 Bacteria 1545
113 Ga0307415_100044850 3300032126 Bacteria 2959
114 Ga0373947_0176006 3300035725 Bacteria 1391
115 Ga0395899_0001040 3300037312 Bacteria 25180
116 Ga0395899_0015700 3300037312 Bacteria 5775
117 Ga0395900_0009912 3300037418 Bacteria 9758
118 Ga0395900_0012312 3300037418 Bacteria 8750
119 Ga0395900_0136913 3300037418 Bacteria 2509
120 Ga0395900_0142366 3300037418 Bacteria 2455
121 Ga0395898_0002977 3300037466 Bacteria 19256
122 Ga0395898_0033893 3300037466 Bacteria 5093
123 Ga0395898_0042262 3300037466 Bacteria 4498
124 Ga0395905_0001457 3300037471 Bacteria 28383
125 Ga0395905_0027511 3300037471 Bacteria 5363
126 Ga0395905_0035969 3300037471 Bacteria 4650
127 Ga0395901_0003303 3300038443 Bacteria 16239
128 Ga0395901_0007886 3300038443 Bacteria 10742
129 Ga0395901_0357133 3300038443 Bacteria 1507
130 Ga0395901_0496027 3300038443 Bacteria 1244
131 Ga0395901_0577372 3300038443 Bacteria 1136
132 Ga0436360_0856232 3300039438 Bacteria 5525
133 Ga0439445_0023495 3300042004 Bacteria 1561
134 Ga0439460_0020851 3300042461 Bacteria 1785
135 Ga0466961_0106587 3300044693 Bacteria 1764
136 Ga0466963_0003821 3300044694 Bacteria 8684
137 Ga0466963_0204781 3300044694 Bacteria 1380
138 Ga0466963_0391040 3300044694 Bacteria 980
139 Ga0466970_0419734 3300044765 Bacteria 765
140 Ga0466960_0000013 3300044901 Bacteria 58320
141 Ga0466960_0052239 3300044901 Bacteria 1977
142 Ga0466959_0008719 3300045049 Bacteria 7181
143 Ga0466959_0216906 3300045049 Bacteria 1328
144 Ga0466958_0006419 3300045836 Bacteria 6398
145 Ga0466958_0145446 3300045836 Bacteria 1494
146 Ga0466967_0008650 3300045976 Bacteria 7485
147 Ga0466967_0060268 3300045976 Bacteria 3362
148 Ga0466967_0149578 3300045976 Bacteria 2181
149 Ga0466967_0326455 3300045976 Bacteria 1481
150 Ga0466967_0834978 3300045976 Bacteria 915
151 Ga0495650_0000188 3300046471 Bacteria 134775
152 Ga0495667_0454452 3300046559 Bacteria 805
153 Ga0495656_0097114 3300046615 Bacteria 1357
154 Ga0495588_0151013 3300046674 Bacteria 1228
155 Ga0495672_0067598 3300047320 Bacteria 2035
156 Ga0495687_005670 3300047443 Bacteria 7885
157 Ga0495677_0067611 3300047445 Bacteria 1330
158 Ga0495684_0561988 3300047471 Bacteria 775
159 Ga0495686_0154942 3300047472 Bacteria 1343
160 Ga0496104_0924346 3300048907 Bacteria 777
161 Ga0496105_0144872 3300048908 Bacteria 1954
162 Ga0496108_0162504 3300048911 Bacteria 1931
163 Ga0496108_0323880 3300048911 Bacteria 1344
164 Ga0496109_0381676 3300048912 Bacteria 1331
165 Ga0496109_0721332 3300048912 Bacteria 934
166 Ga0496110_0237067 3300048913 Bacteria 1660
167 Ga0496111_0435825 3300048914 Bacteria 968
168 Ga0496112_0025325 3300048915 Bacteria 5697
169 Ga0496112_0045299 3300048915 Bacteria 4312
170 Ga0496112_0369463 3300048915 Bacteria 1376
171 Ga0496113_0023202 3300048916 Bacteria 4399
172 Ga0496113_0088634 3300048916 Bacteria 2380
173 Ga0496114_0064365 3300048917 Bacteria 3071
174 Ga0496114_0179022 3300048917 Bacteria 1851
175 Ga0501031_0008680 3300049568 Bacteria 6609
176 Ga0501032_0031564 3300049569 Bacteria 3632
177 Ga0501033_0110345 3300049570 Bacteria 2002
178 Ga0501034_0010198 3300049571 Bacteria 9800
179 Ga0501034_0133322 3300049571 Bacteria 2466
180 Ga0501038_0012869 3300049574 Bacteria 7635
181 Ga0501042_0021166 3300049578 Bacteria 4529
182 Ga0501043_0231964 3300049579 Bacteria 1425
183 Ga0501047_0124486 3300049581 Bacteria 2458
184 Ga0501048_0023799 3300049582 Bacteria 4473
185 Ga0501067_0006532 3300049583 Bacteria 6464
186 Ga0501068_0045720 3300049584 Bacteria 2638
187 Ga0501069_0005651 3300049585 Bacteria 6514
188 Ga0501070_0048225 3300049586 Bacteria 3538
189 Ga0501071_0358752 3300049587 Bacteria 1110
190 Ga0501072_0030080 3300049588 Bacteria 4245
191 Ga0501073_0021293 3300049589 Bacteria 4674
192 Ga0501074_0028249 3300049590 Bacteria 4065
193 Ga0501074_0044820 3300049590 Bacteria 3200
194 Ga0501074_0192402 3300049590 Bacteria 1454
195 Ga0501081_0313653 3300049743 Bacteria 1152
196 Ga0501083_0037553 3300049744 Bacteria 3298
197 Ga0501044_0106185 3300049823 Bacteria 2820
198 nmdc:mga05p37_40115_c1 3300050507 Bacteria 5749
199 nmdc:mga05p37_826003_c1 3300050507 Bacteria 1010
200 nmdc:mga05p37_88058_c1 3300050507 Bacteria 3827
201 nmdc:mga09592_96822_c1 3300050508 Bacteria 2525
202 nmdc:mga0n895_12315_c1 3300050512 Bacteria 7668
203 nmdc:mga0rr50_56938_c1 3300050513 Bacteria 2922
204 Ga0495619_0017985 3300053085 Bacteria 4482
205 Ga0500616_0011413 3300053153 Bacteria 5247
206 Ga0501084_0259024 3300054114 Bacteria 1468
207 2731906194 2731639228 Bacteria 4187555
208 2824707810 2824704595 Bacteria 9667483
209 2824757821 2824753945 Bacteria 9787441
210 2824768668 2824763712 Bacteria 9792355
211 2904711669 2904711408 Bacteria 9771557
212 3003006510 3002998708 Bacteria 11715108
213 8047713810 8047710418 Bacteria 11023148
214 Ga0070683_100225235
215 rootL2_10141531
216 JGI25407J50210_10000101
217 JGI25407J50210_10006675
218 Ga0070658_10488477
219 Ga0070683_100014215
220 Ga0070683_100018776
221 Ga0070683_100706184
222 Ga0068868_100370929
223 Ga0068868_100637074
224 Ga0070660_100212464
225 Ga0070660_100375104
226 Ga0070671_100213428
227 Ga0070688_100094735
228 Ga0070659_100202669
229 Ga0070667_100068561
230 Ga0070714_100000712
231 Ga0070714_100233725
232 Ga0070714_100271308
233 Ga0070713_100020866
234 Ga0070713_100567846
235 Ga0070710_10013102
236 Ga0070708_100027099
237 Ga0070708_100110699
238 Ga0070708_100492671
239 Ga0070678_100052028
240 Ga0070681_10001009
241 Ga0070681_10062739
242 Ga0070706_100021576
243 Ga0070706_100072440
244 Ga0070706_100362367
245 Ga0070698_100433759
246 Ga0070699_100045711
247 Ga0070699_100073103
248 Ga0070699_100141280
249 Ga0070684_100004129
250 Ga0070697_100021351
251 Ga0070693_100112680
252 Ga0068857_100575253
253 Ga0068854_100066436
254 Ga0070702_100318435
255 Ga0081455_10011283
256 Ga0081455_10090991
257 Ga0081455_10200587
258 Ga0081538_10000146
259 Ga0081538_10000488
260 Ga0081540_1000830
261 Ga0081540_1011396
262 Ga0081539_10002991
263 Ga0081539_10003455
264 Ga0070717_10033547
265 Ga0070717_10065279
266 Ga0070717_10293747
267 Ga0070715_10103925
268 Ga0070716_100314943
269 Ga0070712_100088438
270 Ga0070712_100373249
271 Ga0075428_100300776
272 Ga0075430_100114260
273 Ga0075434_100004273
274 Ga0075429_100001926
275 Ga0075435_100026674
276 Ga0099794_10058357
277 Ga0111539_10027145
278 Ga0111539_10563549
279 Ga0105245_10071275
280 Ga0114129_10092215
281 Ga0114129_10850584
282 Ga0105243_10112666
283 Ga0105239_11028839
284 Ga0163163_10142503
285 Ga0157377_10198113
286 Ga0207710_10025870
287 Ga0207684_10042977
288 Ga0207684_10148002
289 Ga0207684_10294494
290 Ga0207707_10000459
291 Ga0207707_10434693
292 Ga0207693_10015501
293 Ga0207693_10091485
294 Ga0207663_10111261
295 Ga0207663_10569032
296 Ga0207657_10247282
297 Ga0207700_10067598
298 Ga0207700_10120945
299 Ga0207700_10527243
300 Ga0207700_10801930
301 Ga0207664_10447503
302 Ga0207709_10112911
303 Ga0207704_10378763
304 Ga0207665_10082689
305 Ga0207665_10273273
306 Ga0207665_10354795
307 Ga0207665_10425748
308 Ga0207661_10002154
309 Ga0207640_10243639
310 Ga0207683_10461204
311 Ga0207698_10191017
312 Ga0268266_10564155
313 Ga0307514_10091854
314 Ga0307405_10021395
315 Ga0307413_10000291
316 Ga0307410_10077604
317 Ga0307410_10292643
318 Ga0307407_10092852
319 Ga0307409_100020809
320 Ga0307409_100662377
321 Ga0307416_100329813
322 Ga0307416_100529201
323 Ga0307414_10068205
324 Ga0307414_10695997
325 Ga0307411_10196332
326 Ga0307415_100044850
327 Ga0373947_0176006
328 Ga0395899_0001040
329 Ga0395899_0015700
330 Ga0395900_0009912
331 Ga0395900_0012312
332 Ga0395900_0136913
333 Ga0395900_0142366
334 Ga0395898_0002977
335 Ga0395898_0033893
336 Ga0395898_0042262
337 Ga0395905_0001457
338 Ga0395905_0027511
339 Ga0395905_0035969
340 Ga0395901_0003303
341 Ga0395901_0007886
342 Ga0395901_0357133
343 Ga0395901_0496027
344 Ga0395901_0577372
345 Ga0436360_0856232
346 Ga0439445_0023495
347 Ga0439460_0020851
348 Ga0466961_0106587
349 Ga0466963_0003821
350 Ga0466963_0204781
351 Ga0466963_0391040
352 Ga0466970_0419734
353 Ga0466960_0000013
354 Ga0466960_0052239
355 Ga0466959_0008719
356 Ga0466959_0216906
357 Ga0466958_0006419
358 Ga0466958_0145446
359 Ga0466967_0008650
360 Ga0466967_0060268
361 Ga0466967_0149578
362 Ga0466967_0326455
363 Ga0466967_0834978
364 Ga0495650_0000188
365 Ga0495667_0454452
366 Ga0495656_0097114
367 Ga0495588_0151013
368 Ga0495672_0067598
369 Ga0495687_005670
370 Ga0495677_0067611
371 Ga0495684_0561988
372 Ga0495686_0154942
373 Ga0496104_0924346
374 Ga0496105_0144872
375 Ga0496108_0162504
376 Ga0496108_0323880
377 Ga0496109_0381676
378 Ga0496109_0721332
379 Ga0496110_0237067
380 Ga0496111_0435825
381 Ga0496112_0025325
382 Ga0496112_0045299
383 Ga0496112_0369463
384 Ga0496113_0023202
385 Ga0496113_0088634
386 Ga0496114_0064365
387 Ga0496114_0179022
388 Ga0501031_0008680
389 Ga0501032_0031564
390 Ga0501033_0110345
391 Ga0501034_0010198
392 Ga0501034_0133322
393 Ga0501038_0012869
394 Ga0501042_0021166
395 Ga0501043_0231964
396 Ga0501047_0124486
397 Ga0501048_0023799
398 Ga0501067_0006532
399 Ga0501068_0045720
400 Ga0501069_0005651
401 Ga0501070_0048225
402 Ga0501071_0358752
403 Ga0501072_0030080
404 Ga0501073_0021293
405 Ga0501074_0028249
406 Ga0501074_0044820
407 Ga0501074_0192402
408 Ga0501081_0313653
409 Ga0501083_0037553
410 Ga0501044_0106185
411 nmdc:mga05p37_40115_c1
412 nmdc:mga05p37_826003_c1
413 nmdc:mga05p37_88058_c1
414 nmdc:mga09592_96822_c1
415 nmdc:mga0n895_12315_c1
416 nmdc:mga0rr50_56938_c1
417 Ga0495619_0017985
418 Ga0500616_0011413
419 Ga0501084_0259024
420 2731906194
421 2824707810
422 2824757821
423 2824768668
424 2904711669
425 3003006510
426 8047713810

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00175

NAD_binding_1

Oxidoreductase NAD-binding domain

137

244

0.95

PF00970

FAD_binding_6

Oxidoreductase FAD-binding domain

37

126

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
1gvh-assembly1.cif.gz_A the x-ray structure of ferric escherichia coli flavohemoglobin reveals an unespected geometry of the distal heme pocket 0.8763 1 224
1gvh-assembly1.cif.gz_A the x-ray structure of ferric escherichia coli flavohemoglobin reveals an unespected geometry of the distal heme pocket 0.8727 1 224
4eh1-assembly1.cif.gz_A crystal structure of the flavohem-like-fad/nad binding domain of nitric oxide dioxygenase from vibrio cholerae o1 biovar el tor 0.8693 1 224
4eh1-assembly1.cif.gz_A crystal structure of the flavohem-like-fad/nad binding domain of nitric oxide dioxygenase from vibrio cholerae o1 biovar el tor 0.8656 1 224
7c3a-assembly3.cif.gz_C ferredoxin reductase in carbazole 1,9a-dioxygenase 0.8565 2 224
ID Description Score Start End Superfamily
af_P75824_106_229_3.40.50.80 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.9015 98 224 3.40.50.80
af_P76254_2_105_2.40.30.10 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.8957 1 84 2.40.30.10
af_P9WJ93_14_122_2.40.30.10 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.8895 1 90 2.40.30.10
4eh1A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.8648 97 224 3.40.50.80
2bgjA01 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.8628 2 86 2.40.30.10
ID Description Score Start End GO Terms
AF-A0A538CVS5-F1-model_v4 FAD-binding FR-type domain-containing protein 0.9833 1 120 GO:0016491
GO:0051537
AF-A0A537XK72-F1-model_v4 Oxidoreductase 0.9744 1 146 GO:0016491
GO:0051537
AF-A0A7Y6CKD3-F1-model_v4 deleted 0.961 1 161
AF-A0A529ZLL6-F1-model_v4 deleted 0.9582 1 130
AF-A0A1H5M4Y4-F1-model_v4 Ferredoxin-NADP reductase 0.9579 1 224 GO:0016491
GO:0051537

Map