F323378

General Info

Members Datasets Scaffolds Average Seq Length
212 170 208 338

Family's Representative Sequence

Representative Sequence 3300050493|nmdc:mga0k408_181843_c1|nmdc:mga0k408_181843_c1_66_1205
Length 379
Sequence MLEDKSILITGGTGSFGKAFVRTVLERYPTIKRLVIYSRDELKQYEMSQVFSDREHPGLRYFIGDVRDEARLRRALEGVDIVVHAAALKQVPAAEYNPFECIKTNVLGAQNLIEACLDSHVERVVALSTDKAAAPINLYGATKLCSDKLFVAANNIKGRRDIRFSVVRYGNVMGSRGSVIPFFLDRRKSGVLPITDPRMTRFNISLQEGVDMVLWSIENSRGGEVLVPKIPSYRITDVAKAIGPECRQEVVGIRPGEKIHEEMITASDSPNTVDMGRYYAILPSGGAYTIDEYCERHDARRGLHSLQLPEHRRRGRRCGGARASLGILDAGPGDSAVRTRLRRPASGTTRGGRHQRDRRAAHRLSGAGHWPQQPGLDQP

Samples

Sample ID Description Type Environment
1 2765235838 Herbaspirillum robiniae AA6 Isolate Unclassified
2 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
3 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
4 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
5 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
6 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
7 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
8 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
9 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
10 3300003575 Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_25 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
11 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
12 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
13 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
14 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
15 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
16 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
17 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
18 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
19 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
20 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
21 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
22 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
23 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
24 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
25 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
26 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
32 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
39 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
40 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
41 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
42 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
43 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
44 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
45 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
46 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
47 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
48 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
49 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
51 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
52 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
53 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
55 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
56 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
59 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
60 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
63 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
64 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
65 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
66 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
67 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
68 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
69 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
70 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
71 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
72 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
73 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
74 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
98 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
99 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
103 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
104 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
105 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
106 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
107 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
108 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
109 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
110 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
111 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
112 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
113 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
114 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
115 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
116 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
117 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
118 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
119 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
120 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
121 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
122 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
123 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
124 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
125 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
126 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
127 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
128 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
129 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
130 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
131 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
132 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
133 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
134 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
135 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
136 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
137 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
138 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
139 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
140 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
141 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
142 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
143 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
144 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
145 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
146 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
147 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
148 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
149 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
150 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
151 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
152 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
153 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
154 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
156 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
157 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
158 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
159 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
160 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
161 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
162 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
163 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
164 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
165 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
166 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
167 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
168 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
169 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
170 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.17
Metatranscriptomes 0.94
Isolates 1.89

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.32
Nodule 0.94
Rhizoplane 0.94
Rhizosphere 79.25
Stem 0
Stem Tuber 0
Unclassified 7.55

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10007916 3300001979 Bacteria 4284
2 JGI25406J46586_10008026 3300003203 Bacteria 4796
3 rootH2_10002668 3300003320 Bacteria 29038
4 rootH2_10168036 3300003320 Bacteria 8082
5 rootH2_10242025 3300003320 Bacteria 3448
6 rootL2_10093546 3300003322 Bacteria 8222
7 rootH1_10006674 3300003323 Bacteria 26593
8 rootH1_10276697 3300003323 Bacteria 1566
9 Ga0007409J51694_1012473 3300003575 Bacteria 10791
10 Ga0055540_1012495 3300003792 Bacteria 2661
11 Ga0065714_10064650 3300005288 Bacteria 25881
12 Ga0070683_100007180 3300005329 Bacteria 9393
13 Ga0070690_100045732 3300005330 Bacteria 2781
14 Ga0070670_100058209 3300005331 Bacteria 3317
15 Ga0070670_100116566 3300005331 Bacteria 2303
16 Ga0068869_100229513 3300005334 Bacteria 1474
17 Ga0070666_10013197 3300005335 Bacteria 5238
18 Ga0070682_100000816 3300005337 Bacteria 18221
19 Ga0068868_100010080 3300005338 Bacteria 6826
20 Ga0070661_100257114 3300005344 Bacteria 1349
21 Ga0070669_100003667 3300005353 Bacteria 11080
22 Ga0070675_100054694 3300005354 Bacteria 3284
23 Ga0070659_100027303 3300005366 Bacteria 4398
24 Ga0070667_100008735 3300005367 Bacteria 8398
25 Ga0070667_100026474 3300005367 Bacteria 4825
26 Ga0070667_100112300 3300005367 Bacteria 2364
27 Ga0070663_100058486 3300005455 Bacteria 2768
28 Ga0070662_100001266 3300005457 Bacteria 15519
29 Ga0070662_100041095 3300005457 Bacteria 3297
30 Ga0070679_100163878 3300005530 Bacteria 2197
31 Ga0070684_100026734 3300005535 Bacteria 4864
32 Ga0068853_100075800 3300005539 Bacteria 2936
33 Ga0070672_100255303 3300005543 Bacteria 1477
34 Ga0070686_100044323 3300005544 Bacteria 2795
35 Ga0070693_100290982 3300005547 Unclassified 1097
36 Ga0070665_100000410 3300005548 Bacteria 62835
37 Ga0070665_100001085 3300005548 Bacteria 33854
38 Ga0070664_100094167 3300005564 Bacteria 2597
39 Ga0068857_100059284 3300005577 Bacteria 3400
40 Ga0068859_100158048 3300005617 Bacteria 2345
41 Ga0068864_100040384 3300005618 Bacteria 3992
42 Ga0068864_100171818 3300005618 Bacteria 1977
43 Ga0068866_10011822 3300005718 Bacteria 3789
44 Ga0068861_100000308 3300005719 Bacteria 27355
45 Ga0068870_10056501 3300005840 Bacteria 2095
46 Ga0068863_100000238 3300005841 Bacteria 58572
47 Ga0068860_100000270 3300005843 Bacteria 75836
48 Ga0068862_100000651 3300005844 Bacteria 35850
49 Ga0081539_10002713 3300005985 Bacteria 24006
50 Ga0075365_10005623 3300006038 Bacteria 6785
51 Ga0075364_10183127 3300006051 Bacteria 1418
52 Ga0070715_10058909 3300006163 Bacteria 1678
53 Ga0075366_10003200 3300006195 Bacteria 8591
54 Ga0097621_100005917 3300006237 Bacteria 8643
55 Ga0097621_100126146 3300006237 Bacteria 2174
56 Ga0068871_100004662 3300006358 Bacteria 9581
57 Ga0068871_100099081 3300006358 Bacteria 2439
58 Ga0075431_100193103 3300006847 Bacteria 2086
59 Ga0068865_100172082 3300006881 Bacteria 1661
60 Ga0097620_100158048 3300006931 Bacteria 2345
61 Ga0079104_1000001 3300006946 Bacteria 521847
62 Ga0105250_10000032 3300009092 Bacteria 159642
63 Ga0111539_10012557 3300009094 Bacteria 10615
64 Ga0114129_10174312 3300009147 Bacteria 2930
65 Ga0105241_10258418 3300009174 Bacteria 1479
66 Ga0105237_10003232 3300009545 Bacteria 19488
67 Ga0105249_10023205 3300009553 Bacteria 5565
68 Ga0105239_10000956 3300010375 Bacteria 40691
69 Ga0105239_10115392 3300010375 Bacteria 2979
70 Ga0105239_10632465 3300010375 Bacteria 1222
71 Ga0157371_10043556 3300013102 Bacteria 3197
72 Ga0157374_10001079 3300013296 Bacteria 23616
73 Ga0157374_10001841 3300013296 Bacteria 17854
74 Ga0157378_10000370 3300013297 Bacteria 44420
75 Ga0163162_10054383 3300013306 Bacteria 4027
76 Ga0163162_10065388 3300013306 Bacteria 3683
77 Ga0157372_10000897 3300013307 Bacteria 32327
78 Ga0163163_10032469 3300014325 Bacteria 5041
79 Ga0163163_10418753 3300014325 Bacteria 1398
80 Ga0157380_10068532 3300014326 Bacteria 2860
81 Ga0157377_10100864 3300014745 Bacteria 1720
82 Ga0157379_10000004 3300014968 Bacteria 173351
83 Ga0157379_10024729 3300014968 Bacteria 5331
84 Ga0157376_10002243 3300014969 Bacteria 13032
85 Ga0209025_1004823 3300025294 Bacteria 11398
86 Ga0209758_1001625 3300025297 Bacteria 25604
87 Ga0209051_1000136 3300025303 Bacteria 138015
88 Ga0209257_1000055 3300025304 Bacteria 415534
89 Ga0207696_1000198 3300025711 Bacteria 92750
90 Ga0207647_10127029 3300025904 Bacteria 1500
91 Ga0207645_10195689 3300025907 Bacteria 1329
92 Ga0207681_10003217 3300025923 Bacteria 10239
93 Ga0207650_10102924 3300025925 Bacteria 2201
94 Ga0207664_10105087 3300025929 Unclassified 2340
95 Ga0207690_10025119 3300025932 Bacteria 3737
96 Ga0207706_10006581 3300025933 Bacteria 10763
97 Ga0207706_10048707 3300025933 Bacteria 3747
98 Ga0207704_10148477 3300025938 Bacteria 1651
99 Ga0207689_10008906 3300025942 Bacteria 8704
100 Ga0207661_10003063 3300025944 Bacteria 11577
101 Ga0207712_10010934 3300025961 Bacteria 5775
102 Ga0207658_10032544 3300025986 Bacteria 3712
103 Ga0207658_10055249 3300025986 Bacteria 2942
104 Ga0207658_10075601 3300025986 Bacteria 2563
105 Ga0207677_10013263 3300026023 Bacteria 4770
106 Ga0207639_10156041 3300026041 Bacteria 1918
107 Ga0207678_10155922 3300026067 Bacteria 1949
108 Ga0207641_10000189 3300026088 Bacteria 86363
109 Ga0207648_10109244 3300026089 Bacteria 2427
110 Ga0207676_10125473 3300026095 Bacteria 2173
111 Ga0207674_10097198 3300026116 Bacteria 2929
112 Ga0207675_100002941 3300026118 Bacteria 16755
113 Ga0207675_100111896 3300026118 Bacteria 2576
114 Ga0209281_1000151 3300027111 Bacteria 167268
115 Ga0265354_1000797 3300028016 Bacteria 5146
116 Ga0268266_10000294 3300028379 Bacteria 81573
117 Ga0268266_10010372 3300028379 Bacteria 8145
118 Ga0268266_10109692 3300028379 Bacteria 2444
119 Ga0268265_10008093 3300028380 Bacteria 7105
120 Ga0268264_10000164 3300028381 Bacteria 147861
121 Ga0307511_10004692 3300030521 Bacteria 13975
122 Ga0265770_1001507 3300030878 Bacteria 3195
123 Ga0265330_10000022 3300031235 Bacteria 154198
124 Ga0265332_10000001 3300031238 Bacteria 863783
125 Ga0265320_10098844 3300031240 Bacteria 1345
126 Ga0307509_10019267 3300031507 Bacteria 7790
127 Ga0307408_100105181 3300031548 Bacteria 2157
128 Ga0265314_10000013 3300031711 Bacteria 403405
129 Ga0316576_10249084 3300031727 Bacteria 1334
130 Ga0307516_10011241 3300031730 Bacteria 9756
131 Ga0307405_10003512 3300031731 Bacteria 7220
132 Ga0307413_10008054 3300031824 Bacteria 4945
133 Ga0307410_10022707 3300031852 Bacteria 3884
134 Ga0307406_10003065 3300031901 Bacteria 9091
135 Ga0307407_10063378 3300031903 Bacteria 2168
136 Ga0307412_10036446 3300031911 Bacteria 3151
137 Ga0307409_100009599 3300031995 Bacteria 5957
138 Ga0307409_100267178 3300031995 Bacteria 1573
139 Ga0307416_100055428 3300032002 Bacteria 3193
140 Ga0307416_100267854 3300032002 Bacteria 1675
141 Ga0307414_10135677 3300032004 Bacteria 1918
142 Ga0307411_10045567 3300032005 Bacteria 2821
143 Ga0307415_100039612 3300032126 Bacteria 3116
144 Ga0373937_0019696 3300036401 Bacteria 6043
145 Ga0395900_0019802 3300037418 Bacteria 6858
146 Ga0395900_0142530 3300037418 Bacteria 2453
147 Ga0395898_0038969 3300037466 Bacteria 4706
148 Ga0395905_0002754 3300037471 Bacteria 19250
149 Ga0395905_0015922 3300037471 Bacteria 7145
150 Ga0395905_0119661 3300037471 Bacteria 2475
151 Ga0395901_0459079 3300038443 Bacteria 1302
152 Ga0400484_39896 3300038725 Bacteria 8799
153 Ga0400483_238768 3300039062 Bacteria 23085
154 Ga0451793_1689444 3300041452 Bacteria 1376
155 Ga0451795_1044215 3300041456 Bacteria 3368
156 Ga0451853_2372611 3300041512 Bacteria 1339
157 Ga0450890_009716 3300042127 Bacteria 1235
158 Ga0439464_0019173 3300042439 Bacteria 1866
159 Ga0451577_0158152 3300042876 Bacteria 2040
160 Ga0466969_0001057 3300044656 Bacteria 14871
161 Ga0453683_0008563 3300044673 Bacteria 6863
162 Ga0466961_0000714 3300044693 Bacteria 20956
163 Ga0453684_0000544 3300044712 Bacteria 142537
164 Ga0453684_0001670 3300044712 Bacteria 60115
165 Ga0453684_0004980 3300044712 Bacteria 27021
166 Ga0453684_0006853 3300044712 Bacteria 21405
167 Ga0453684_0017023 3300044712 Bacteria 11292
168 Ga0453684_0152815 3300044712 Bacteria 2740
169 Ga0453684_0259759 3300044712 Bacteria 1990
170 Ga0466971_0051932 3300044719 Bacteria 1846
171 Ga0466957_0106561 3300044842 Bacteria 1773
172 Ga0466959_0000604 3300045049 Bacteria 20935
173 Ga0451576_0004109 3300045051 Bacteria 19207
174 Ga0451576_0022294 3300045051 Bacteria 6869
175 Ga0451576_0087718 3300045051 Bacteria 3236
176 Ga0451576_0273188 3300045051 Bacteria 1767
177 Ga0466967_0042672 3300045976 Bacteria 3921
178 Ga0466967_0192745 3300045976 Bacteria 1927
179 Ga0495638_0004445 3300046460 Bacteria 10620
180 Ga0495609_0000449 3300046538 Bacteria 33799
181 Ga0495621_0006568 3300046539 Bacteria 3403
182 Ga0495656_0000016 3300046615 Bacteria 122424
183 Ga0495625_0001626 3300046660 Bacteria 26485
184 Ga0495659_0000027 3300046664 Bacteria 68298
185 Ga0496121_0003630 3300048924 Bacteria 21732
186 Ga0496125_0003791 3300048928 Bacteria 17973
187 Ga0496126_0014782 3300048929 Bacteria 7875
188 Ga0501039_0044006 3300049575 Bacteria 3449
189 Ga0501083_0192041 3300049744 Bacteria 1333
190 nmdc:mga00v17_82143_c1 3300050491 Bacteria 2013
191 nmdc:mga0yw44_109562_c1 3300050492 Bacteria 1768
192 nmdc:mga0k408_104192_c1 3300050493 Bacteria 1674
193 nmdc:mga0k408_181843_c1 3300050493 Bacteria 1254
194 nmdc:mga09592_165120_c1 3300050508 Bacteria 1913
195 nmdc:mga06r32_107518_c1 3300050510 Bacteria 2741
196 nmdc:mga08y16_20441_c1 3300050511 Bacteria 6988
197 Ga0500643_000014 3300053087 Bacteria 318249
198 Ga0500643_001245 3300053087 Bacteria 15089
199 Ga0500646_0001694 3300053090 Bacteria 5822
200 Ga0500583_0000003 3300053092 Bacteria 229587
201 Ga0500651_0001832 3300053093 Bacteria 10908
202 Ga0500628_000528 3300053129 Bacteria 7080
203 Ga0500652_000050 3300053131 Bacteria 55884
204 Ga0500616_0004116 3300053153 Bacteria 10542
205 Ga0500616_0007291 3300053153 Bacteria 7054
206 Ga0500616_0037855 3300053153 Bacteria 2609
207 Ga0500622_0000053 3300053156 Bacteria 145070
208 Ga0500637_0027435 3300053178 Bacteria 3144

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300044842 Ga0466957_0106561 Ga0466957_0106561_834_1748 300
2 3300032002 Ga0307416_100267854 Ga0307416_1002678542 313
3 3300044712 Ga0453684_0004980 Ga0453684_0004980_9205_10221 319
4 3300010375 Ga0105239_10632465 Ga0105239_106324652 320
5 3300044656 Ga0466969_0001057 Ga0466969_0001057_7375_8385 324
6 3300044693 Ga0466961_0000714 Ga0466961_0000714_7357_8367 324
7 3300045049 Ga0466959_0000604 Ga0466959_0000604_7357_8367 324
8 iso_pu_bacteria 2765235838 2765567658 326
9 3300038443 Ga0395901_0459079 Ga0395901_0459079_285_1283 328
10 3300005330 Ga0070690_100045732 Ga0070690_1000457322 329
11 3300005334 Ga0068869_100229513 Ga0068869_1002295132 329
12 3300005335 Ga0070666_10013197 Ga0070666_100131974 329
13 3300005338 Ga0068868_100010080 Ga0068868_1000100804 329
14 3300005344 Ga0070661_100257114 Ga0070661_1002571142 329
15 3300005367 Ga0070667_100112300 Ga0070667_1001123002 329
16 3300005457 Ga0070662_100041095 Ga0070662_1000410954 329
17 3300005544 Ga0070686_100044323 Ga0070686_1000443232 329
18 3300005547 Ga0070693_100290982 Ga0070693_1002909821 329
19 3300005718 Ga0068866_10011822 Ga0068866_100118224 329
20 3300005840 Ga0068870_10056501 Ga0068870_100565012 329
21 3300006237 Ga0097621_100005917 Ga0097621_1000059174 329
22 3300006358 Ga0068871_100004662 Ga0068871_1000046625 329
23 3300006881 Ga0068865_100172082 Ga0068865_1001720822 329
24 3300009174 Ga0105241_10258418 Ga0105241_102584181 329
25 3300013102 Ga0157371_10043556 Ga0157371_100435564 329
26 3300013296 Ga0157374_10001079 Ga0157374_1000107912 329
27 3300013306 Ga0163162_10054383 Ga0163162_100543832 329
28 3300014745 Ga0157377_10100864 Ga0157377_101008642 329
29 3300014968 Ga0157379_10024729 Ga0157379_100247293 329
30 3300014969 Ga0157376_10002243 Ga0157376_100022439 329
31 3300025933 Ga0207706_10048707 Ga0207706_100487072 329
32 3300025938 Ga0207704_10148477 Ga0207704_101484771 329
33 3300025942 Ga0207689_10008906 Ga0207689_100089064 329
34 3300003323 rootH1_10276697 rootH1_102766972 330
35 3300005617 Ga0068859_100158048 Ga0068859_1001580482 330
36 3300006038 Ga0075365_10005623 Ga0075365_100056232 330
37 3300006195 Ga0075366_10003200 Ga0075366_100032006 330
38 3300006931 Ga0097620_100158048 Ga0097620_1001580482 330
39 3300041452 Ga0451793_1689444 Ga0451793_1689444_121_1128 330
40 3300041456 Ga0451795_1044215 Ga0451795_1044215_2036_3043 330
41 3300041512 Ga0451853_2372611 Ga0451853_2372611_288_1298 330
42 3300044712 Ga0453684_0259759 Ga0453684_0259759_177_1172 330
43 3300045051 Ga0451576_0022294 Ga0451576_0022294_3398_4405 330
44 3300045976 Ga0466967_0042672 Ga0466967_0042672_2566_3570 330
45 3300046539 Ga0495621_0006568 Ga0495621_0006568_1694_2710 330
46 3300050492 nmdc:mga0yw44_109562_c1 nmdc:mga0yw44_109562_c1_341_1348 330
47 3300050493 nmdc:mga0k408_181843_c1 nmdc:mga0k408_181843_c1_66_1205 330
48 3300053090 Ga0500646_0001694 Ga0500646_0001694_1803_2810 330
49 3300053093 Ga0500651_0001832 Ga0500651_0001832_7609_8616 330
50 3300053129 Ga0500628_000528 Ga0500628_000528_2803_3810 330
51 3300053131 Ga0500652_000050 Ga0500652_000050_17813_18820 330
52 3300053153 Ga0500616_0007291 Ga0500616_0007291_4338_5360 330
53 3300053156 Ga0500622_0000053 Ga0500622_0000053_68470_69477 330
54 3300003792 Ga0055540_1012495 Ga0055540_10124952 331
55 3300005331 Ga0070670_100058209 Ga0070670_1000582092 331
56 3300005367 Ga0070667_100008735 Ga0070667_1000087355 331
57 3300005455 Ga0070663_100058486 Ga0070663_1000584863 331
58 3300005539 Ga0068853_100075800 Ga0068853_1000758003 331
59 3300005618 Ga0068864_100040384 Ga0068864_1000403841 331
60 3300005841 Ga0068863_100000238 Ga0068863_10000023820 331
61 3300005843 Ga0068860_100000270 Ga0068860_10000027034 331
62 3300006946 Ga0079104_1000001 Ga0079104_1000001421 331
63 3300009545 Ga0105237_10003232 Ga0105237_100032329 331
64 3300010375 Ga0105239_10000956 Ga0105239_1000095617 331
65 3300025303 Ga0209051_1000136 Ga0209051_100013654 331
66 3300025304 Ga0209257_1000055 Ga0209257_1000055237 331
67 3300025904 Ga0207647_10127029 Ga0207647_101270292 331
68 3300025986 Ga0207658_10075601 Ga0207658_100756013 331
69 3300026041 Ga0207639_10156041 Ga0207639_101560412 331
70 3300026067 Ga0207678_10155922 Ga0207678_101559222 331
71 3300026088 Ga0207641_10000189 Ga0207641_1000018927 331
72 3300026095 Ga0207676_10125473 Ga0207676_101254732 331
73 3300027111 Ga0209281_1000151 Ga0209281_1000151104 331
74 3300028381 Ga0268264_10000164 Ga0268264_1000016487 331
75 3300031507 Ga0307509_10019267 Ga0307509_100192672 331
76 3300031548 Ga0307408_100105181 Ga0307408_1001051812 331
77 3300031731 Ga0307405_10003512 Ga0307405_100035124 331
78 3300031824 Ga0307413_10008054 Ga0307413_100080542 331
79 3300031852 Ga0307410_10022707 Ga0307410_100227074 331
80 3300031901 Ga0307406_10003065 Ga0307406_100030654 331
81 3300031903 Ga0307407_10063378 Ga0307407_100633782 331
82 3300031911 Ga0307412_10036446 Ga0307412_100364462 331
83 3300031995 Ga0307409_100009599 Ga0307409_1000095995 331
84 3300032002 Ga0307416_100055428 Ga0307416_1000554282 331
85 3300032004 Ga0307414_10135677 Ga0307414_101356772 331
86 3300032005 Ga0307411_10045567 Ga0307411_100455673 331
87 3300032126 Ga0307415_100039612 Ga0307415_1000396124 331
88 3300042127 Ga0450890_009716 Ga0450890_009716_106_1137 331
89 3300042439 Ga0439464_0019173 Ga0439464_0019173_579_1610 331
90 3300045051 Ga0451576_0087718 Ga0451576_0087718_1437_2447 331
91 3300046460 Ga0495638_0004445 Ga0495638_0004445_503_1507 331
92 3300046660 Ga0495625_0001626 Ga0495625_0001626_3226_4230 331
93 3300048928 Ga0496125_0003791 Ga0496125_0003791_4476_5492 331
94 3300053153 Ga0500616_0004116 Ga0500616_0004116_8314_9369 331
95 iso_pu_bacteria 2919186247 2919190979 331
96 iso_pu_bacteria 2939664404 2939669259 331
97 3300005331 Ga0070670_100116566 Ga0070670_1001165662 332
98 3300005367 Ga0070667_100026474 Ga0070667_1000264743 332
99 3300005548 Ga0070665_100000410 Ga0070665_10000041016 332
100 3300009092 Ga0105250_10000032 Ga0105250_1000003293 332
101 3300014968 Ga0157379_10000004 Ga0157379_1000000476 332
102 3300025925 Ga0207650_10102924 Ga0207650_101029242 332
103 3300025986 Ga0207658_10055249 Ga0207658_100552492 332
104 3300028016 Ga0265354_1000797 Ga0265354_10007973 332
105 3300028379 Ga0268266_10000294 Ga0268266_1000029468 332
106 3300028379 Ga0268266_10109692 Ga0268266_101096922 332
107 3300030878 Ga0265770_1001507 Ga0265770_10015073 332
108 3300005288 Ga0065714_10064650 Ga0065714_1006465021 333
109 3300005353 Ga0070669_100003667 Ga0070669_1000036674 333
110 3300005366 Ga0070659_100027303 Ga0070659_1000273032 333
111 3300005457 Ga0070662_100001266 Ga0070662_10000126615 333
112 3300005530 Ga0070679_100163878 Ga0070679_1001638782 333
113 3300005543 Ga0070672_100255303 Ga0070672_1002553032 333
114 3300005564 Ga0070664_100094167 Ga0070664_1000941672 333
115 3300005577 Ga0068857_100059284 Ga0068857_1000592842 333
116 3300005618 Ga0068864_100171818 Ga0068864_1001718182 333
117 3300005719 Ga0068861_100000308 Ga0068861_10000030825 333
118 3300005844 Ga0068862_100000651 Ga0068862_10000065130 333
119 3300006051 Ga0075364_10183127 Ga0075364_101831271 333
120 3300006237 Ga0097621_100126146 Ga0097621_1001261462 333
121 3300009094 Ga0111539_10012557 Ga0111539_100125577 333
122 3300009553 Ga0105249_10023205 Ga0105249_100232057 333
123 3300013306 Ga0163162_10065388 Ga0163162_100653883 333
124 3300014325 Ga0163163_10418753 Ga0163163_104187531 333
125 3300025711 Ga0207696_1000198 Ga0207696_10001983 333
126 3300025907 Ga0207645_10195689 Ga0207645_101956891 333
127 3300025923 Ga0207681_10003217 Ga0207681_100032177 333
128 3300025932 Ga0207690_10025119 Ga0207690_100251193 333
129 3300025933 Ga0207706_10006581 Ga0207706_100065812 333
130 3300025961 Ga0207712_10010934 Ga0207712_100109342 333
131 3300026116 Ga0207674_10097198 Ga0207674_100971983 333
132 3300026118 Ga0207675_100002941 Ga0207675_1000029413 333
133 3300028380 Ga0268265_10008093 Ga0268265_100080933 333
134 3300050491 nmdc:mga00v17_82143_c1 nmdc:mga00v17_82143_c1_551_1564 333
135 3300050493 nmdc:mga0k408_104192_c1 nmdc:mga0k408_104192_c1_541_1557 333
136 3300050511 nmdc:mga08y16_20441_c1 nmdc:mga08y16_20441_c1_4833_5849 333
137 3300006847 Ga0075431_100193103 Ga0075431_1001931032 334
138 3300025929 Ga0207664_10105087 Ga0207664_101050872 334
139 3300044719 Ga0466971_0051932 Ga0466971_0051932_415_1419 334
140 3300045976 Ga0466967_0192745 Ga0466967_0192745_902_1906 334
141 3300049575 Ga0501039_0044006 Ga0501039_0044006_1935_3023 334
142 3300050510 nmdc:mga06r32_107518_c1 nmdc:mga06r32_107518_c1_917_1933 334
143 3300053092 Ga0500583_0000003 Ga0500583_0000003_105958_106971 334
144 iso_pu_bacteria 2910245624 2910248267 334
145 3300003203 JGI25406J46586_10008026 JGI25406J46586_100080264 335
146 3300003320 rootH2_10242025 rootH2_102420253 335
147 3300003322 rootL2_10093546 rootL2_100935462 335
148 3300003323 rootH1_10006674 rootH1_1000667416 335
149 3300005329 Ga0070683_100007180 Ga0070683_1000071808 335
150 3300005535 Ga0070684_100026734 Ga0070684_1000267343 335
151 3300005985 Ga0081539_10002713 Ga0081539_1000271312 335
152 3300006163 Ga0070715_10058909 Ga0070715_100589092 335
153 3300006358 Ga0068871_100099081 Ga0068871_1000990812 335
154 3300009147 Ga0114129_10174312 Ga0114129_101743123 335
155 3300013297 Ga0157378_10000370 Ga0157378_1000037021 335
156 3300013307 Ga0157372_10000897 Ga0157372_1000089717 335
157 3300014326 Ga0157380_10068532 Ga0157380_100685322 335
158 3300025297 Ga0209758_1001625 Ga0209758_10016254 335
159 3300025944 Ga0207661_10003063 Ga0207661_100030636 335
160 3300025986 Ga0207658_10032544 Ga0207658_100325442 335
161 3300026023 Ga0207677_10013263 Ga0207677_100132634 335
162 3300026089 Ga0207648_10109244 Ga0207648_101092443 335
163 3300030521 Ga0307511_10004692 Ga0307511_100046924 335
164 3300037418 Ga0395900_0019802 Ga0395900_0019802_2515_3534 335
165 3300037418 Ga0395900_0142530 Ga0395900_0142530_1212_2231 335
166 3300037471 Ga0395905_0002754 Ga0395905_0002754_5418_6437 335
167 3300037471 Ga0395905_0015922 Ga0395905_0015922_5596_6615 335
168 3300037471 Ga0395905_0119661 Ga0395905_0119661_493_1512 335
169 3300038725 Ga0400484_39896 Ga0400484_39896_601_1617 335
170 3300039062 Ga0400483_238768 Ga0400483_238768_2661_3716 335
171 3300042876 Ga0451577_0158152 Ga0451577_0158152_718_1746 335
172 3300044673 Ga0453683_0008563 Ga0453683_0008563_71_1099 335
173 3300044712 Ga0453684_0000544 Ga0453684_0000544_30253_31263 335
174 3300044712 Ga0453684_0001670 Ga0453684_0001670_34812_35819 335
175 3300044712 Ga0453684_0017023 Ga0453684_0017023_6633_7643 335
176 3300044712 Ga0453684_0152815 Ga0453684_0152815_510_1532 335
177 3300045051 Ga0451576_0004109 Ga0451576_0004109_9480_10508 335
178 3300045051 Ga0451576_0273188 Ga0451576_0273188_15_1022 335
179 3300046615 Ga0495656_0000016 Ga0495656_0000016_83342_84352 335
180 3300046664 Ga0495659_0000027 Ga0495659_0000027_16440_17450 335
181 3300048929 Ga0496126_0014782 Ga0496126_0014782_5239_6249 335
182 3300050508 nmdc:mga09592_165120_c1 nmdc:mga09592_165120_c1_737_1867 335
183 3300053153 Ga0500616_0037855 Ga0500616_0037855_123_1133 335
184 3300001979 JGI24740J21852_10007916 JGI24740J21852_100079164 336
185 3300003320 rootH2_10002668 rootH2_1000266815 336
186 3300003320 rootH2_10168036 rootH2_101680363 336
187 3300003575 Ga0007409J51694_1012473 Ga0007409J51694_10124734 336
188 3300005337 Ga0070682_100000816 Ga0070682_10000081611 336
189 3300005354 Ga0070675_100054694 Ga0070675_1000546942 336
190 3300005548 Ga0070665_100001085 Ga0070665_10000108517 336
191 3300010375 Ga0105239_10115392 Ga0105239_101153922 336
192 3300013296 Ga0157374_10001841 Ga0157374_1000184110 336
193 3300014325 Ga0163163_10032469 Ga0163163_100324692 336
194 3300025294 Ga0209025_1004823 Ga0209025_100482313 336
195 3300026118 Ga0207675_100111896 Ga0207675_1001118962 336
196 3300028379 Ga0268266_10010372 Ga0268266_100103725 336
197 3300031235 Ga0265330_10000022 Ga0265330_1000002268 336
198 3300031238 Ga0265332_10000001 Ga0265332_10000001577 336
199 3300031240 Ga0265320_10098844 Ga0265320_100988442 336
200 3300031711 Ga0265314_10000013 Ga0265314_10000013240 336
201 3300031727 Ga0316576_10249084 Ga0316576_102490841 336
202 3300031730 Ga0307516_10011241 Ga0307516_1001124110 336
203 3300031995 Ga0307409_100267178 Ga0307409_1002671782 336
204 3300036401 Ga0373937_0019696 Ga0373937_0019696_104_1129 336
205 3300037466 Ga0395898_0038969 Ga0395898_0038969_2381_3391 336
206 3300044712 Ga0453684_0006853 Ga0453684_0006853_5490_6506 336
207 3300046538 Ga0495609_0000449 Ga0495609_0000449_26540_27553 336
208 3300048924 Ga0496121_0003630 Ga0496121_0003630_8197_9222 336
209 3300049744 Ga0501083_0192041 Ga0501083_0192041_70_1167 336
210 3300053087 Ga0500643_000014 Ga0500643_000014_230356_231381 336
211 3300053087 Ga0500643_001245 Ga0500643_001245_6093_7136 336
212 3300053178 Ga0500637_0027435 Ga0500637_0027435_487_1605 336

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02719

Polysacc_synt_2

Polysaccharide biosynthesis protein

7

283

0.97

PF01073

3Beta_HSD

3-beta hydroxysteroid dehydrogenase/isomerase family

8

189

0.86

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

8

180

0.86

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

7

226

0.84

PF07993

NAD_binding_4

Male sterility protein

9

137

0.84

PF08659

KR

KR domain

6

143

0.81

PF04321

RmlD_sub_bind

RmlD substrate binding domain

5

190

0.78

PF13460

NAD_binding_10

NAD(P)H-binding

11

170

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
2gn4-assembly1.cif.gz_A crystal structure of udp-glcnac inverting 4,6-dehydratase in complex with nadph and udp-glcnac 0.9412 1 324
3vvb-assembly1.cif.gz_A crystal structure of capsular polysaccharide synthesizing enzyme cape from staphylococcus aureus in apo form 0.9357 3 326
6bwc-assembly1.cif.gz_E x-ray structure of pen from bacillus thuringiensis 0.9267 1 328
2gn4-assembly1.cif.gz_A crystal structure of udp-glcnac inverting 4,6-dehydratase in complex with nadph and udp-glcnac 0.9246 1 324
6bwc-assembly1.cif.gz_B x-ray structure of pen from bacillus thuringiensis 0.9184 1 328
ID Description Score Start End Superfamily
6bwcE01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9431 1 306 3.40.50.720
3vvbA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9357 3 326 3.40.50.720
6bwcE01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.927 1 306 3.40.50.720
2gn9B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9231 1 308 3.40.50.720
4j2oA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9213 3 283 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2K8YUN9-F1-model_v4 UDP-N-acetylglucosamine 4,6-dehydratase (Inverting) 0.9771 1 336
AF-A0A2K8YUN9-F1-model_v4 UDP-N-acetylglucosamine 4,6-dehydratase (Inverting) 0.9742 1 336
AF-A0A257JBU6-F1-model_v4 UDP-N-acetylglucosamine 4,6-dehydratase (Inverting) 0.9721 1 121
AF-A0A4Y5YCI2-F1-model_v4 UDP-N-acetylglucosamine 4,6-dehydratase (Inverting) (EC 4.2.1.115) 0.9696 1 336 GO:0016829
AF-A0A7G3FMT3-F1-model_v4 UDP-N-acetylglucosamine 4,6-dehydratase (Inverting) 0.9688 1 336

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pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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