F322987

General Info

Members Datasets Scaffolds Average Seq Length
212 121 424 381

Family's Representative Sequence

Representative Sequence 3300031238|Ga0265332_10008390|Ga0265332_100083902
Length 416
Sequence MTGLVPQKEGELRGEDSQVRKSGPGAPSYSAVFAERPEGWNRPALIQPSGDGELLEVAMGPHHPSTHGVFRMDVALDGERVIRLKPVFGYLHRNHEKIAEGISYLGSMPYTDRLDYICPITNNWAYALAVEKLTGQDVPERAEYLRVILGELTRFQNHASSIGFLIQEMGASGTPLMYAFREREKILDLFEKLTGARMMVNYMRFGGCRVDASPAWLDATRKVVAGLPQFVDEFDQLLSSNEILMARTQGVGVLKADLAVNAGITGPMLRASGVNYDIRKVDGYGIYNRFNFRVPLGDHGDVYDRFMIRMLEMRESITILEQALKEIPKGPIMDPKAKIRGFRPKPGEAYGRIEAPKGELGFYLISDGGANPYRYRIRPPSLINLTVLEDMCLGHDVADVVLIFGSVDIVLGEVDR

Samples

Sample ID Description Type Environment
1 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
20 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
21 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
22 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
23 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
24 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
25 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
26 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
27 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
29 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
30 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
31 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
32 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
33 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
34 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
35 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
36 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
37 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
38 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
39 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
40 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
58 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
59 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
60 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
61 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
62 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
63 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
64 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
65 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
66 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
67 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
68 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
69 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
70 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
71 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
72 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
73 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
74 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
75 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
76 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
77 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
78 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
79 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
80 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
81 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
82 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
83 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
84 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
85 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
86 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
87 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
88 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
89 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
90 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
91 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
92 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
93 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
94 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
95 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
96 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
97 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
98 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
99 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
100 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
101 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
102 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
103 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
104 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
105 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
106 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
107 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
108 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
109 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
110 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
111 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
112 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
113 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
116 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
117 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
118 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
119 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
120 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
121 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.06
Metatranscriptomes 0.94
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.42
Rhizosphere 96.23
Stem 0
Stem Tuber 0
Unclassified 5.66

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265332_10008390 3300031238 Bacteria 4643
2 rootH2_10052670 3300003320 Bacteria 4768
3 Ga0070658_10008408 3300005327 Bacteria 8298
4 Ga0070658_10205414 3300005327 Bacteria 1663
5 Ga0070683_100008922 3300005329 Bacteria 8545
6 Ga0068868_100272239 3300005338 Bacteria 1431
7 Ga0070660_100141392 3300005339 Bacteria 1931
8 Ga0070689_100066444 3300005340 Bacteria 2809
9 Ga0070714_100013671 3300005435 Bacteria 6510
10 Ga0070714_100076412 3300005435 Bacteria 2907
11 Ga0070713_100010174 3300005436 Bacteria 6785
12 Ga0070663_100014607 3300005455 Bacteria 5045
13 Ga0070681_10113948 3300005458 Bacteria 2643
14 Ga0070698_100024310 3300005471 Bacteria 6321
15 Ga0070679_100244198 3300005530 Bacteria 1752
16 Ga0070684_100002270 3300005535 Bacteria 14154
17 Ga0070665_100393136 3300005548 Bacteria 1394
18 Ga0068855_100001588 3300005563 Bacteria 28536
19 Ga0068855_100004505 3300005563 Bacteria 17019
20 Ga0068855_100009720 3300005563 Bacteria 11608
21 Ga0068855_100018582 3300005563 Bacteria 8360
22 Ga0068855_100053813 3300005563 Bacteria 4735
23 Ga0068855_100157633 3300005563 Bacteria 2578
24 Ga0068854_100010151 3300005578 Bacteria 6101
25 Ga0068856_100096609 3300005614 Bacteria 2943
26 Ga0068859_100070444 3300005617 Bacteria 3532
27 Ga0070717_10000112 3300006028 Bacteria 63904
28 Ga0068871_100046682 3300006358 Bacteria 3489
29 Ga0068871_100204326 3300006358 Bacteria 1707
30 Ga0075428_100006169 3300006844 Bacteria 13338
31 Ga0075428_100162151 3300006844 Bacteria 2427
32 Ga0075431_100111068 3300006847 Bacteria 2829
33 Ga0075429_100015957 3300006880 Bacteria 6507
34 Ga0097620_100070442 3300006931 Bacteria 3532
35 Ga0105240_10002977 3300009093 Bacteria 26658
36 Ga0105240_10006113 3300009093 Bacteria 17762
37 Ga0105240_10021078 3300009093 Bacteria 8674
38 Ga0105240_10022469 3300009093 Bacteria 8360
39 Ga0105240_10024493 3300009093 Bacteria 7952
40 Ga0105240_10057674 3300009093 Bacteria 4850
41 Ga0105240_10175948 3300009093 Unclassified 2530
42 Ga0105240_10197291 3300009093 Bacteria 2361
43 Ga0105240_10512175 3300009093 Bacteria 1333
44 Ga0111539_10024953 3300009094 Bacteria 7327
45 Ga0111539_10048160 3300009094 Bacteria 5090
46 Ga0111539_10135907 3300009094 Bacteria 2879
47 Ga0105245_10545241 3300009098 Bacteria 1181
48 Ga0105247_10067147 3300009101 Bacteria 2234
49 Ga0105248_10000002 3300009177 Bacteria 1054120
50 Ga0105248_10244212 3300009177 Bacteria 2021
51 Ga0105238_10022535 3300009551 Bacteria 6420
52 Ga0105238_10096308 3300009551 Bacteria 2945
53 Ga0157370_10008869 3300013104 Bacteria 10809
54 Ga0157370_10035732 3300013104 Bacteria 4827
55 Ga0157370_10102825 3300013104 Bacteria 2675
56 Ga0157370_10133801 3300013104 Bacteria 2312
57 Ga0157370_10195960 3300013104 Bacteria 1875
58 Ga0157369_10009433 3300013105 Bacteria 11156
59 Ga0157369_10013303 3300013105 Bacteria 9308
60 Ga0157369_10022683 3300013105 Bacteria 7001
61 Ga0157369_10033708 3300013105 Bacteria 5625
62 Ga0157369_10057968 3300013105 Bacteria 4178
63 Ga0157369_10165586 3300013105 Bacteria 2332
64 Ga0157378_10051405 3300013297 Bacteria 3667
65 Ga0157372_10006885 3300013307 Bacteria 12095
66 Ga0157372_10011083 3300013307 Bacteria 9590
67 Ga0157372_10026897 3300013307 Bacteria 6262
68 Ga0157372_10040234 3300013307 Bacteria 5162
69 Ga0157372_10173363 3300013307 Bacteria 2496
70 Ga0157375_10000203 3300013308 Bacteria 55131
71 Ga0157375_10115437 3300013308 Unclassified 2788
72 Ga0163163_10000140 3300014325 Bacteria 74966
73 Ga0157376_10163969 3300014969 Unclassified 2017
74 Ga0206351_10800859 3300020077 Bacteria 1378
75 Ga0207705_10046266 3300025909 Bacteria 3126
76 Ga0207705_10107420 3300025909 Unclassified 2059
77 Ga0207705_10112032 3300025909 Bacteria 2017
78 Ga0207705_10133131 3300025909 Bacteria 1851
79 Ga0207707_10069496 3300025912 Bacteria 3069
80 Ga0207707_10139787 3300025912 Bacteria 2117
81 Ga0207695_10000096 3300025913 Bacteria 265048
82 Ga0207695_10000398 3300025913 Bacteria 97114
83 Ga0207695_10003250 3300025913 Bacteria 23105
84 Ga0207695_10017935 3300025913 Bacteria 8197
85 Ga0207695_10036712 3300025913 Bacteria 5293
86 Ga0207695_10080785 3300025913 Bacteria 3291
87 Ga0207660_10018083 3300025917 Bacteria 4695
88 Ga0207657_10236376 3300025919 Bacteria 1460
89 Ga0207694_10293982 3300025924 Bacteria 1336
90 Ga0207664_10010540 3300025929 Bacteria 6530
91 Ga0207664_10061272 3300025929 Bacteria 3001
92 Ga0207706_10210193 3300025933 Bacteria 1706
93 Ga0207670_10007497 3300025936 Bacteria 6092
94 Ga0207670_10114220 3300025936 Unclassified 1951
95 Ga0207670_10238410 3300025936 Bacteria 1400
96 Ga0207711_10000008 3300025941 Bacteria 597686
97 Ga0207661_10005174 3300025944 Bacteria 9169
98 Ga0207667_10001458 3300025949 Bacteria 29676
99 Ga0207667_10006805 3300025949 Bacteria 13810
100 Ga0207667_10039377 3300025949 Bacteria 5038
101 Ga0207667_10047634 3300025949 Bacteria 4536
102 Ga0207640_10038592 3300025981 Bacteria 3016
103 Ga0207677_10161464 3300026023 Bacteria 1742
104 Ga0207678_10004055 3300026067 Bacteria 13178
105 Ga0207702_10100477 3300026078 Bacteria 2552
106 Ga0207702_10362331 3300026078 Bacteria 1390
107 Ga0268266_10093753 3300028379 Unclassified 2635
108 Ga0268266_10329654 3300028379 Bacteria 1430
109 Ga0265318_10005196 3300028577 Bacteria 6145
110 Ga0265318_10030867 3300028577 Bacteria 2082
111 Ga0265318_10034845 3300028577 Bacteria 1938
112 Ga0265322_10038042 3300028654 Bacteria 1370
113 Ga0265336_10006704 3300028666 Bacteria 4130
114 Ga0265336_10009769 3300028666 Bacteria 3306
115 Ga0265338_10000210 3300028800 Bacteria 107885
116 Ga0265338_10000248 3300028800 Bacteria 98976
117 Ga0265338_10002440 3300028800 Bacteria 27933
118 Ga0265338_10006524 3300028800 Bacteria 14835
119 Ga0265338_10007891 3300028800 Bacteria 13052
120 Ga0265338_10008249 3300028800 Bacteria 12684
121 Ga0265338_10029122 3300028800 Bacteria 5485
122 Ga0265338_10036878 3300028800 Bacteria 4667
123 Ga0265338_10042368 3300028800 Bacteria 4240
124 Ga0265338_10094730 3300028800 Bacteria 2455
125 Ga0265324_10001294 3300029957 Bacteria 14689
126 Ga0265760_10009901 3300031090 Bacteria 2721
127 Ga0265330_10005878 3300031235 Bacteria 6081
128 Ga0265320_10000646 3300031240 Bacteria 26600
129 Ga0265320_10005869 3300031240 Bacteria 7817
130 Ga0265320_10080949 3300031240 Bacteria 1516
131 Ga0265325_10031471 3300031241 Bacteria 2839
132 Ga0265339_10005980 3300031249 Bacteria 8042
133 Ga0265339_10016933 3300031249 Bacteria 4330
134 Ga0265331_10038624 3300031250 Unclassified 2333
135 Ga0265331_10118558 3300031250 Bacteria 1211
136 Ga0265327_10002003 3300031251 Bacteria 23024
137 Ga0265327_10005729 3300031251 Bacteria 10237
138 Ga0265327_10012167 3300031251 Bacteria 5838
139 Ga0265316_10021557 3300031344 Bacteria 5453
140 Ga0265316_10203955 3300031344 Bacteria 1465
141 Ga0265313_10030789 3300031595 Bacteria 2757
142 Ga0265313_10044919 3300031595 Bacteria 2153
143 Ga0265314_10000090 3300031711 Bacteria 137914
144 Ga0265314_10006526 3300031711 Bacteria 10300
145 Ga0265314_10020237 3300031711 Bacteria 5139
146 Ga0265314_10073807 3300031711 Bacteria 2274
147 Ga0265314_10084174 3300031711 Bacteria 2088
148 Ga0265342_10030900 3300031712 Bacteria 3315
149 Ga0265342_10071596 3300031712 Bacteria 2019
150 Ga0307405_10093558 3300031731 Unclassified 1997
151 Ga0307410_10167557 3300031852 Bacteria 1652
152 Ga0307412_10044794 3300031911 Unclassified 2888
153 Ga0307416_100221153 3300032002 Unclassified 1816
154 Ga0373926_0033678 3300035083 Bacteria 1812
155 Ga0373935_0003449 3300035692 Bacteria 9187
156 Ga0373927_0022338 3300035695 Bacteria 4144
157 Ga0373933_0036538 3300035724 Bacteria 2876
158 Ga0373947_0023502 3300035725 Bacteria 3586
159 Ga0373937_0130518 3300036401 Bacteria 2347
160 Ga0373925_0015486 3300037068 Bacteria 5513
161 Ga0439441_018359 3300042001 Bacteria 1264
162 Ga0451577_0000087 3300042876 Bacteria 207662
163 Ga0451577_0002035 3300042876 Bacteria 25021
164 Ga0451577_0006562 3300042876 Bacteria 11572
165 Ga0451577_0158047 3300042876 Bacteria 2041
166 Ga0453684_0000866 3300044712 Bacteria 101700
167 Ga0453684_0006275 3300044712 Bacteria 22758
168 Ga0451576_0215931 3300045051 Bacteria 2003
169 Ga0451576_0256480 3300045051 Bacteria 1828
170 Ga0495641_0036840 3300046461 Bacteria 2296
171 Ga0495651_0010772 3300046462 Bacteria 7030
172 Ga0495662_0020277 3300046476 Bacteria 3215
173 Ga0495618_0026947 3300046514 Bacteria 3576
174 Ga0495628_0001014 3300046516 Bacteria 25650
175 Ga0495628_0161643 3300046516 Unclassified 1702
176 Ga0495630_0028269 3300046517 Bacteria 4167
177 Ga0495666_0065116 3300046526 Bacteria 1739
178 Ga0495652_0010307 3300046529 Bacteria 8470
179 Ga0495652_0034131 3300046529 Bacteria 4436
180 Ga0495640_0043590 3300046533 Bacteria 3123
181 Ga0495586_0008072 3300046535 Bacteria 5613
182 Ga0495587_0028871 3300046536 Bacteria 3370
183 Ga0495645_0005573 3300046543 Bacteria 8659
184 Ga0495634_0046160 3300046642 Bacteria 2941
185 Ga0495635_0122073 3300046663 Bacteria 1777
186 Ga0495599_0129477 3300046678 Bacteria 1568
187 Ga0495658_0005146 3300046683 Bacteria 6431
188 Ga0495658_0134225 3300046683 Bacteria 1509
189 Ga0495674_0048956 3300047319 Bacteria 3737
190 Ga0495676_0131254 3300047321 Bacteria 1808
191 Ga0495675_0079879 3300047444 Unclassified 2060
192 Ga0495684_0106831 3300047471 Bacteria 2115
193 Ga0495684_0231817 3300047471 Bacteria 1350
194 Ga0496107_0207600 3300048910 Bacteria 1456
195 Ga0496114_0113949 3300048917 Bacteria 2318
196 Ga0496115_0013121 3300048918 Bacteria 6258
197 Ga0496120_0024496 3300048923 Bacteria 3763
198 Ga0496126_0001301 3300048929 Bacteria 39774
199 Ga0496126_0002319 3300048929 Bacteria 26104
200 Ga0496126_0112492 3300048929 Bacteria 2370
201 Ga0501031_0000260 3300049568 Bacteria 29811
202 Ga0501046_0195095 3300049580 Bacteria 1509
203 Ga0501083_0010758 3300049744 Bacteria 6433
204 Ga0501083_0012673 3300049744 Bacteria 5899
205 Ga0501035_0026902 3300049822 Bacteria 5259
206 nmdc:mga09592_26763_c1 3300050508 Bacteria 4780
207 nmdc:mga09592_331507_c1 3300050508 Bacteria 1317
208 nmdc:mga06r32_99351_c1 3300050510 Bacteria 2854
209 nmdc:mga08y16_137254_c1 3300050511 Bacteria 2542
210 nmdc:mga08y16_42645_c1 3300050511 Bacteria 4751
211 Ga0495601_0143154 3300053077 Bacteria 1560
212 Ga0590075_015395 3300059424 Bacteria 1877
213 Ga0265332_10008390
214 rootH2_10052670
215 Ga0070658_10008408
216 Ga0070658_10205414
217 Ga0070683_100008922
218 Ga0068868_100272239
219 Ga0070660_100141392
220 Ga0070689_100066444
221 Ga0070714_100013671
222 Ga0070714_100076412
223 Ga0070713_100010174
224 Ga0070663_100014607
225 Ga0070681_10113948
226 Ga0070698_100024310
227 Ga0070679_100244198
228 Ga0070684_100002270
229 Ga0070665_100393136
230 Ga0068855_100001588
231 Ga0068855_100004505
232 Ga0068855_100009720
233 Ga0068855_100018582
234 Ga0068855_100053813
235 Ga0068855_100157633
236 Ga0068854_100010151
237 Ga0068856_100096609
238 Ga0068859_100070444
239 Ga0070717_10000112
240 Ga0068871_100046682
241 Ga0068871_100204326
242 Ga0075428_100006169
243 Ga0075428_100162151
244 Ga0075431_100111068
245 Ga0075429_100015957
246 Ga0097620_100070442
247 Ga0105240_10002977
248 Ga0105240_10006113
249 Ga0105240_10021078
250 Ga0105240_10022469
251 Ga0105240_10024493
252 Ga0105240_10057674
253 Ga0105240_10175948
254 Ga0105240_10197291
255 Ga0105240_10512175
256 Ga0111539_10024953
257 Ga0111539_10048160
258 Ga0111539_10135907
259 Ga0105245_10545241
260 Ga0105247_10067147
261 Ga0105248_10000002
262 Ga0105248_10244212
263 Ga0105238_10022535
264 Ga0105238_10096308
265 Ga0157370_10008869
266 Ga0157370_10035732
267 Ga0157370_10102825
268 Ga0157370_10133801
269 Ga0157370_10195960
270 Ga0157369_10009433
271 Ga0157369_10013303
272 Ga0157369_10022683
273 Ga0157369_10033708
274 Ga0157369_10057968
275 Ga0157369_10165586
276 Ga0157378_10051405
277 Ga0157372_10006885
278 Ga0157372_10011083
279 Ga0157372_10026897
280 Ga0157372_10040234
281 Ga0157372_10173363
282 Ga0157375_10000203
283 Ga0157375_10115437
284 Ga0163163_10000140
285 Ga0157376_10163969
286 Ga0206351_10800859
287 Ga0207705_10046266
288 Ga0207705_10107420
289 Ga0207705_10112032
290 Ga0207705_10133131
291 Ga0207707_10069496
292 Ga0207707_10139787
293 Ga0207695_10000096
294 Ga0207695_10000398
295 Ga0207695_10003250
296 Ga0207695_10017935
297 Ga0207695_10036712
298 Ga0207695_10080785
299 Ga0207660_10018083
300 Ga0207657_10236376
301 Ga0207694_10293982
302 Ga0207664_10010540
303 Ga0207664_10061272
304 Ga0207706_10210193
305 Ga0207670_10007497
306 Ga0207670_10114220
307 Ga0207670_10238410
308 Ga0207711_10000008
309 Ga0207661_10005174
310 Ga0207667_10001458
311 Ga0207667_10006805
312 Ga0207667_10039377
313 Ga0207667_10047634
314 Ga0207640_10038592
315 Ga0207677_10161464
316 Ga0207678_10004055
317 Ga0207702_10100477
318 Ga0207702_10362331
319 Ga0268266_10093753
320 Ga0268266_10329654
321 Ga0265318_10005196
322 Ga0265318_10030867
323 Ga0265318_10034845
324 Ga0265322_10038042
325 Ga0265336_10006704
326 Ga0265336_10009769
327 Ga0265338_10000210
328 Ga0265338_10000248
329 Ga0265338_10002440
330 Ga0265338_10006524
331 Ga0265338_10007891
332 Ga0265338_10008249
333 Ga0265338_10029122
334 Ga0265338_10036878
335 Ga0265338_10042368
336 Ga0265338_10094730
337 Ga0265324_10001294
338 Ga0265760_10009901
339 Ga0265330_10005878
340 Ga0265320_10000646
341 Ga0265320_10005869
342 Ga0265320_10080949
343 Ga0265325_10031471
344 Ga0265339_10005980
345 Ga0265339_10016933
346 Ga0265331_10038624
347 Ga0265331_10118558
348 Ga0265327_10002003
349 Ga0265327_10005729
350 Ga0265327_10012167
351 Ga0265316_10021557
352 Ga0265316_10203955
353 Ga0265313_10030789
354 Ga0265313_10044919
355 Ga0265314_10000090
356 Ga0265314_10006526
357 Ga0265314_10020237
358 Ga0265314_10073807
359 Ga0265314_10084174
360 Ga0265342_10030900
361 Ga0265342_10071596
362 Ga0307405_10093558
363 Ga0307410_10167557
364 Ga0307412_10044794
365 Ga0307416_100221153
366 Ga0373926_0033678
367 Ga0373935_0003449
368 Ga0373927_0022338
369 Ga0373933_0036538
370 Ga0373947_0023502
371 Ga0373937_0130518
372 Ga0373925_0015486
373 Ga0439441_018359
374 Ga0451577_0000087
375 Ga0451577_0002035
376 Ga0451577_0006562
377 Ga0451577_0158047
378 Ga0453684_0000866
379 Ga0453684_0006275
380 Ga0451576_0215931
381 Ga0451576_0256480
382 Ga0495641_0036840
383 Ga0495651_0010772
384 Ga0495662_0020277
385 Ga0495618_0026947
386 Ga0495628_0001014
387 Ga0495628_0161643
388 Ga0495630_0028269
389 Ga0495666_0065116
390 Ga0495652_0010307
391 Ga0495652_0034131
392 Ga0495640_0043590
393 Ga0495586_0008072
394 Ga0495587_0028871
395 Ga0495645_0005573
396 Ga0495634_0046160
397 Ga0495635_0122073
398 Ga0495599_0129477
399 Ga0495658_0005146
400 Ga0495658_0134225
401 Ga0495674_0048956
402 Ga0495676_0131254
403 Ga0495675_0079879
404 Ga0495684_0106831
405 Ga0495684_0231817
406 Ga0496107_0207600
407 Ga0496114_0113949
408 Ga0496115_0013121
409 Ga0496120_0024496
410 Ga0496126_0001301
411 Ga0496126_0002319
412 Ga0496126_0112492
413 Ga0501031_0000260
414 Ga0501046_0195095
415 Ga0501083_0010758
416 Ga0501083_0012673
417 Ga0501035_0026902
418 nmdc:mga09592_26763_c1
419 nmdc:mga09592_331507_c1
420 nmdc:mga06r32_99351_c1
421 nmdc:mga08y16_137254_c1
422 nmdc:mga08y16_42645_c1
423 Ga0495601_0143154
424 Ga0590075_015395

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00346

Complex1_49kDa

Respiratory-chain NADH dehydrogenase, 49 Kd subunit

168

416

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
5gpn-assembly1.cif.gz_Z architecture of mammalian respirasome 0.6113 38 370
2fug-assembly1.cif.gz_4 crystal structure of the hydrophilic domain of respiratory complex i from thermus thermophilus 0.609 38 370
7qsn-assembly1.cif.gz_D bovine complex i in lipid nanodisc, deactive-apo 0.6003 50 370
6g72-assembly1.cif.gz_D mouse mitochondrial complex i in the deactive state 0.5974 43 370
7a24-assembly1.cif.gz_G assembly intermediate of the plant mitochondrial complex i 0.5969 29 367
ID Description Score Start End Superfamily
2fugV00 Mainly Alpha;Orthogonal Bundle;Cytochrome-c3 Hydrogenase; chain B;Cytochrome-c3 Hydrogenase, chain B 0.6093 38 370 1.10.645.10
af_A0A0R0F8X5_10_328_1.10.645.10 Mainly Alpha;Orthogonal Bundle;Cytochrome-c3 Hydrogenase; chain B;Cytochrome-c3 Hydrogenase, chain B 0.585 27 351 1.10.645.10
af_P9WJH5_38_440_1.10.645.10 Mainly Alpha;Orthogonal Bundle;Cytochrome-c3 Hydrogenase; chain B;Cytochrome-c3 Hydrogenase, chain B 0.5837 29 370 1.10.645.10
af_P33599_211_596_1.10.645.10 Mainly Alpha;Orthogonal Bundle;Cytochrome-c3 Hydrogenase; chain B;Cytochrome-c3 Hydrogenase, chain B 0.5831 27 370 1.10.645.10
af_P16431_180_537_1.10.645.10 Mainly Alpha;Orthogonal Bundle;Cytochrome-c3 Hydrogenase; chain B;Cytochrome-c3 Hydrogenase, chain B 0.5793 27 370 1.10.645.10
ID Description Score Start End GO Terms
AF-A0A7V8AKB4-F1-model_v4 NADH-quinone oxidoreductase subunit D 0.7909 97 199 GO:0016651
GO:0048038
GO:0051287
AF-A0A661I9E6-F1-model_v4 NADH-quinone oxidoreductase subunit D 0.6398 93 370 GO:0016651
GO:0048038
GO:0051287
AF-A0A3B9HC57-F1-model_v4 NADH-quinone oxidoreductase subunit D (EC 1.6.5.11) 0.6356 88 370 GO:0016651
GO:0048038
GO:0051287
AF-A0A7C7GZN4-F1-model_v4 NADH-quinone oxidoreductase subunit D (EC 1.6.5.11) 0.6342 75 370 GO:0016651
GO:0048038
GO:0051287
AF-A0A183VXW4-F1-model_v4 deleted 0.6329 94 361

Map