F322846

General Info

Members Datasets Scaffolds Average Seq Length
212 95 424 240

Family's Representative Sequence

Representative Sequence 3300013296|Ga0157374_10411349|Ga0157374_104113492
Length 276
Sequence MPVIVWIRARVIGHATHFEFAIRSNREHFQNQVDQKLMDTTGSREDRRDTVSLSDEETVTKILIDSVHGLWNIVNDLTRLRPSRRDRYRVTIFGSARAAPGGFASEETKRAAAALAALGCDIITGGGPGLMEAANEGAATSFGKVQSVGIRVELPFEQNVNAFVSQAFEHRTFFTRLHQFVLTSDAYIVAPGGIGTVLETMMIWQLLQVRHLRDTPLILVGQMWPGLVDWARTAMLSYDPPLASLEDFSIPQCVAGADEAIAIIREHHARWRDGNQ

Samples

Sample ID Description Type Environment
1 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
5 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
10 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
11 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
12 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
13 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
14 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
15 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
16 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
17 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
18 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
19 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
20 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
21 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
22 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
23 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
25 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
26 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
27 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
28 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
33 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
34 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
35 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
36 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
37 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
38 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
39 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
40 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
41 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
42 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
43 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
44 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
45 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
46 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
47 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
48 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
49 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
50 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
51 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
52 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
53 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
54 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
55 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
56 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
57 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
58 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
59 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
60 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
61 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
62 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
63 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
64 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
65 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
66 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
67 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
68 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
69 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
70 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
71 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
72 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
73 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
74 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
75 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
76 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
77 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
78 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
79 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
80 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
81 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
82 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
83 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
85 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
86 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
87 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
88 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
89 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
90 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
91 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
92 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
93 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
94 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
95 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.89
Rhizosphere 98.11
Stem 0
Stem Tuber 0
Unclassified 12.26

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157374_10411349 3300013296 Unclassified 1350
2 Ga0065715_10205939 3300005293 Unclassified 1337
3 Ga0065707_10004210 3300005295 Bacteria 5713
4 Ga0065707_10098319 3300005295 Bacteria 3091
5 Ga0070677_10023281 3300005333 Bacteria 2292
6 Ga0070669_100182069 3300005353 Bacteria 1644
7 Ga0070675_100625033 3300005354 Bacteria 978
8 Ga0070675_100729846 3300005354 Unclassified 903
9 Ga0070674_100226779 3300005356 Bacteria 1456
10 Ga0070659_100350336 3300005366 Unclassified 1239
11 Ga0070662_100061140 3300005457 Bacteria 2749
12 Ga0070699_100715541 3300005518 Bacteria 915
13 Ga0081455_10011575 3300005937 Bacteria 8854
14 Ga0075428_100023252 3300006844 Bacteria 6855
15 Ga0075428_100034116 3300006844 Bacteria 5614
16 Ga0075428_100052519 3300006844 Bacteria 4466
17 Ga0075428_100105644 3300006844 Bacteria 3070
18 Ga0075428_100115753 3300006844 Bacteria 2920
19 Ga0075428_100149960 3300006844 Unclassified 2533
20 Ga0075428_100155051 3300006844 Bacteria 2488
21 Ga0075428_100307671 3300006844 Unclassified 1703
22 Ga0075428_100338484 3300006844 Bacteria 1616
23 Ga0075428_100368304 3300006844 Bacteria 1541
24 Ga0075428_100760148 3300006844 Unclassified 1031
25 Ga0075430_100005802 3300006846 Bacteria 10414
26 Ga0075430_100030514 3300006846 Bacteria 4579
27 Ga0075431_100006519 3300006847 Bacteria 11590
28 Ga0075431_100015083 3300006847 Bacteria 7825
29 Ga0075431_100026578 3300006847 Bacteria 5938
30 Ga0075431_100033592 3300006847 Bacteria 5286
31 Ga0075431_100034085 3300006847 Bacteria 5246
32 Ga0075431_100147744 3300006847 Bacteria 2422
33 Ga0075431_100259508 3300006847 Unclassified 1764
34 Ga0075433_10025183 3300006852 Bacteria 5030
35 Ga0075433_10316071 3300006852 Bacteria 1382
36 Ga0075434_100814017 3300006871 Bacteria 950
37 Ga0075429_100081952 3300006880 Bacteria 2813
38 Ga0075429_100088227 3300006880 Bacteria 2703
39 Ga0075429_100206288 3300006880 Bacteria 1722
40 Ga0075435_100011024 3300007076 Bacteria 6630
41 Ga0105240_10302801 3300009093 Unclassified 1828
42 Ga0111539_10020483 3300009094 Bacteria 8145
43 Ga0111539_10027625 3300009094 Bacteria 6931
44 Ga0111539_10028707 3300009094 Bacteria 6784
45 Ga0111539_10120067 3300009094 Unclassified 3080
46 Ga0111539_10583715 3300009094 Unclassified 1302
47 Ga0111539_10843394 3300009094 Bacteria 1066
48 Ga0111539_10920487 3300009094 Bacteria 1017
49 Ga0105245_10156673 3300009098 Unclassified 2157
50 Ga0105247_10500617 3300009101 Bacteria 885
51 Ga0114129_10005451 3300009147 Bacteria 17973
52 Ga0114129_10036809 3300009147 Bacteria 6910
53 Ga0114129_10069722 3300009147 Bacteria 4901
54 Ga0114129_10075080 3300009147 Bacteria 4707
55 Ga0114129_10168081 3300009147 Bacteria 2992
56 Ga0114129_10625534 3300009147 Unclassified 1392
57 Ga0105249_10068487 3300009553 Bacteria 3273
58 Ga0105249_10463650 3300009553 Bacteria 1307
59 Ga0105239_10443833 3300010375 Bacteria 1471
60 Ga0163163_10594227 3300014325 Unclassified 1170
61 Ga0163163_10968079 3300014325 Bacteria 914
62 Ga0157379_10294029 3300014968 Bacteria 1480
63 Ga0207681_10422245 3300025923 Bacteria 1080
64 Ga0207659_10625882 3300025926 Unclassified 919
65 Ga0207687_10182882 3300025927 Unclassified 1625
66 Ga0207689_10483487 3300025942 Unclassified 1037
67 Ga0209971_1038308 3300027682 Bacteria 1154
68 Ga0209974_10093136 3300027876 Unclassified 1047
69 Ga0207428_10006091 3300027907 Bacteria 11153
70 Ga0265327_10008685 3300031251 Bacteria 7519
71 Ga0373940_0109174 3300035088 Bacteria 848
72 Ga0373943_0254211 3300035170 Bacteria 988
73 Ga0373931_0440215 3300035691 Bacteria 832
74 Ga0373937_0008992 3300036401 Bacteria 8673
75 Ga0373937_0111649 3300036401 Bacteria 2543
76 Ga0439435_0037093 3300042436 Bacteria 1350
77 Ga0439444_0013277 3300042437 Unclassified 1363
78 Ga0451577_0666587 3300042876 Bacteria 943
79 Ga0439440_0081589 3300042993 Unclassified 856
80 Ga0495580_0180458 3300046472 Bacteria 1458
81 Ga0495639_0156249 3300046475 Bacteria 1102
82 Ga0495628_0002520 3300046516 Bacteria 16500
83 Ga0495628_0037884 3300046516 Bacteria 3863
84 Ga0495630_0040396 3300046517 Bacteria 3486
85 Ga0495645_0358396 3300046543 Bacteria 938
86 Ga0495667_0504161 3300046559 Unclassified 758
87 Ga0495658_0136400 3300046683 Bacteria 1497
88 Ga0495658_0271374 3300046683 Bacteria 1069
89 Ga0495613_0091977 3300046689 Bacteria 2197
90 Ga0495600_0303476 3300046809 Bacteria 1007
91 Ga0495684_0010594 3300047471 Bacteria 7126
92 Ga0496102_0694518 3300048905 Bacteria 940
93 Ga0496106_0032013 3300048909 Bacteria 3920
94 Ga0496109_0167597 3300048912 Bacteria 2060
95 Ga0496112_0125721 3300048915 Bacteria 2535
96 Ga0501032_0105990 3300049569 Bacteria 1862
97 Ga0501033_0149474 3300049570 Bacteria 1686
98 Ga0501036_0124230 3300049572 Bacteria 2179
99 Ga0501036_0131528 3300049572 Bacteria 2112
100 Ga0501036_0555304 3300049572 Bacteria 954
101 Ga0501037_0181896 3300049573 Bacteria 1491
102 Ga0501038_0051186 3300049574 Bacteria 3566
103 Ga0501038_0262721 3300049574 Bacteria 1364
104 Ga0501038_0368969 3300049574 Bacteria 1115
105 Ga0501039_0001562 3300049575 Bacteria 16845
106 Ga0501039_0020092 3300049575 Bacteria 5120
107 Ga0501039_0534595 3300049575 Bacteria 920
108 Ga0501040_0008194 3300049576 Bacteria 6793
109 Ga0501040_0008627 3300049576 Bacteria 6617
110 Ga0501040_0218206 3300049576 Bacteria 1357
111 Ga0501041_0042148 3300049577 Unclassified 2772
112 Ga0501041_0083864 3300049577 Bacteria 1964
113 Ga0501041_0178098 3300049577 Bacteria 1331
114 Ga0501041_0335311 3300049577 Bacteria 955
115 Ga0501041_0427442 3300049577 Bacteria 840
116 Ga0501043_0010603 3300049579 Bacteria 7215
117 Ga0501043_0571815 3300049579 Bacteria 837
118 Ga0501046_0130500 3300049580 Bacteria 1906
119 Ga0501046_0235561 3300049580 Bacteria 1351
120 Ga0501046_0348398 3300049580 Bacteria 1076
121 Ga0501048_0116292 3300049582 Bacteria 1889
122 Ga0501068_0002418 3300049584 Bacteria 9910
123 Ga0501068_0023618 3300049584 Bacteria 3605
124 Ga0501068_0086918 3300049584 Bacteria 1925
125 Ga0501069_0062052 3300049585 Bacteria 2087
126 Ga0501070_0579444 3300049586 Bacteria 896
127 Ga0501071_0072155 3300049587 Bacteria 2518
128 Ga0501071_0083738 3300049587 Bacteria 2336
129 Ga0501071_0230133 3300049587 Bacteria 1396
130 Ga0501072_0007298 3300049588 Bacteria 8383
131 Ga0501072_0032020 3300049588 Bacteria 4116
132 Ga0501072_0046202 3300049588 Bacteria 3426
133 Ga0501072_0058627 3300049588 Bacteria 3034
134 Ga0501072_0064443 3300049588 Bacteria 2890
135 Ga0501072_0082710 3300049588 Bacteria 2545
136 Ga0501072_0349364 3300049588 Bacteria 1174
137 Ga0501072_0418546 3300049588 Bacteria 1062
138 Ga0501073_0134981 3300049589 Bacteria 1710
139 Ga0501074_0062391 3300049590 Bacteria 2684
140 Ga0501074_0202533 3300049590 Bacteria 1414
141 Ga0501074_0255453 3300049590 Bacteria 1246
142 Ga0501075_0005663 3300049591 Bacteria 8550
143 Ga0501075_0025385 3300049591 Bacteria 4353
144 Ga0501075_0028514 3300049591 Bacteria 4121
145 Ga0501075_0123902 3300049591 Bacteria 1967
146 Ga0501075_0590613 3300049591 Bacteria 847
147 Ga0501076_0008285 3300049592 Bacteria 7614
148 Ga0501076_0014118 3300049592 Bacteria 6006
149 Ga0501076_0039711 3300049592 Bacteria 3696
150 Ga0501076_0570037 3300049592 Bacteria 934
151 Ga0501077_0002450 3300049593 Bacteria 11121
152 Ga0501077_0117226 3300049593 Bacteria 1688
153 Ga0501079_0008873 3300049741 Bacteria 7612
154 Ga0501079_0057351 3300049741 Bacteria 3005
155 Ga0501079_0067008 3300049741 Unclassified 2770
156 Ga0501079_0234531 3300049741 Bacteria 1434
157 Ga0501079_0473230 3300049741 Bacteria 984
158 Ga0501080_0096970 3300049742 Unclassified 2738
159 Ga0501080_0198899 3300049742 Bacteria 1840
160 Ga0501080_0263586 3300049742 Bacteria 1569
161 Ga0501081_0001591 3300049743 Bacteria 14001
162 Ga0501081_0005138 3300049743 Bacteria 8426
163 Ga0501081_0190856 3300049743 Bacteria 1484
164 Ga0501081_0377591 3300049743 Bacteria 1047
165 Ga0501083_0250236 3300049744 Bacteria 1154
166 Ga0501035_0140824 3300049822 Bacteria 2097
167 Ga0501045_0013090 3300049824 Bacteria 5851
168 Ga0501045_0101128 3300049824 Bacteria 2134
169 nmdc:mga05p37_16900_c1 3300050507 Bacteria 8797
170 nmdc:mga05p37_260902_c1 3300050507 Bacteria 2074
171 nmdc:mga05p37_41441_c1 3300050507 Bacteria 5653
172 nmdc:mga05p37_55240_c1 3300050507 Bacteria 4886
173 nmdc:mga05p37_93371_c1 3300050507 Bacteria 3708
174 nmdc:mga09592_11164_c1 3300050508 Bacteria 7309
175 nmdc:mga09592_208949_c1 3300050508 Bacteria 1691
176 nmdc:mga09592_38946_c1 3300050508 Bacteria 3992
177 nmdc:mga09592_83176_c1 3300050508 Bacteria 2728
178 nmdc:mga0qj67_148543_c1 3300050509 Bacteria 1901
179 nmdc:mga0qj67_26996_c1 3300050509 Bacteria 4448
180 nmdc:mga0qj67_28647_c1 3300050509 Bacteria 4324
181 nmdc:mga06r32_133844_c1 3300050510 Bacteria 2453
182 nmdc:mga06r32_282847_c1 3300050510 Bacteria 1646
183 nmdc:mga06r32_2915_c1 3300050510 Bacteria 15345
184 nmdc:mga06r32_38985_c1 3300050510 Bacteria 4505
185 nmdc:mga06r32_74230_c1 3300050510 Bacteria 3297
186 nmdc:mga08y16_118688_c1 3300050511 Unclassified 2753
187 nmdc:mga08y16_12658_c1 3300050511 Bacteria 8874
188 nmdc:mga08y16_210198_c1 3300050511 Bacteria 2015
189 nmdc:mga08y16_219610_c1 3300050511 Bacteria 1968
190 nmdc:mga08y16_551011_c1 3300050511 Bacteria 1167
191 nmdc:mga08y16_979485_c1 3300050511 Bacteria 827
192 nmdc:mga0rr50_795469_c1 3300050513 Bacteria 807
193 nmdc:mga0a205_124888_c1 3300050515 Bacteria 2473
194 nmdc:mga0a205_361461_c1 3300050515 Bacteria 1318
195 Ga0495612_0004020 3300053078 Bacteria 6094
196 Ga0501084_0019221 3300054114 Bacteria 5690
197 Ga0501084_0070001 3300054114 Bacteria 2937
198 Ga0501084_0234195 3300054114 Bacteria 1550
199 Ga0501084_0247783 3300054114 Bacteria 1504
200 Ga0501084_0445490 3300054114 Bacteria 1095
201 Ga0501082_0018818 3300060353 Bacteria 5950
202 Ga0501082_0038447 3300060353 Bacteria 4129
203 Ga0501082_0062819 3300060353 Unclassified 3197
204 Ga0501082_0136943 3300060353 Bacteria 2124
205 Ga0501082_0324960 3300060353 Bacteria 1340
206 Ga0530510_0008468 3300061734 Bacteria 7171
207 Ga0530510_0011398 3300061734 Bacteria 6235
208 Ga0530510_0012839 3300061734 Bacteria 5888
209 Ga0530510_0025227 3300061734 Bacteria 4250
210 Ga0530510_0059779 3300061734 Bacteria 2757
211 Ga0530510_0310074 3300061734 Bacteria 1182
212 Ga0530510_0354061 3300061734 Bacteria 1103
213 Ga0157374_10411349
214 Ga0065715_10205939
215 Ga0065707_10004210
216 Ga0065707_10098319
217 Ga0070677_10023281
218 Ga0070669_100182069
219 Ga0070675_100625033
220 Ga0070675_100729846
221 Ga0070674_100226779
222 Ga0070659_100350336
223 Ga0070662_100061140
224 Ga0070699_100715541
225 Ga0081455_10011575
226 Ga0075428_100023252
227 Ga0075428_100034116
228 Ga0075428_100052519
229 Ga0075428_100105644
230 Ga0075428_100115753
231 Ga0075428_100149960
232 Ga0075428_100155051
233 Ga0075428_100307671
234 Ga0075428_100338484
235 Ga0075428_100368304
236 Ga0075428_100760148
237 Ga0075430_100005802
238 Ga0075430_100030514
239 Ga0075431_100006519
240 Ga0075431_100015083
241 Ga0075431_100026578
242 Ga0075431_100033592
243 Ga0075431_100034085
244 Ga0075431_100147744
245 Ga0075431_100259508
246 Ga0075433_10025183
247 Ga0075433_10316071
248 Ga0075434_100814017
249 Ga0075429_100081952
250 Ga0075429_100088227
251 Ga0075429_100206288
252 Ga0075435_100011024
253 Ga0105240_10302801
254 Ga0111539_10020483
255 Ga0111539_10027625
256 Ga0111539_10028707
257 Ga0111539_10120067
258 Ga0111539_10583715
259 Ga0111539_10843394
260 Ga0111539_10920487
261 Ga0105245_10156673
262 Ga0105247_10500617
263 Ga0114129_10005451
264 Ga0114129_10036809
265 Ga0114129_10069722
266 Ga0114129_10075080
267 Ga0114129_10168081
268 Ga0114129_10625534
269 Ga0105249_10068487
270 Ga0105249_10463650
271 Ga0105239_10443833
272 Ga0163163_10594227
273 Ga0163163_10968079
274 Ga0157379_10294029
275 Ga0207681_10422245
276 Ga0207659_10625882
277 Ga0207687_10182882
278 Ga0207689_10483487
279 Ga0209971_1038308
280 Ga0209974_10093136
281 Ga0207428_10006091
282 Ga0265327_10008685
283 Ga0373940_0109174
284 Ga0373943_0254211
285 Ga0373931_0440215
286 Ga0373937_0008992
287 Ga0373937_0111649
288 Ga0439435_0037093
289 Ga0439444_0013277
290 Ga0451577_0666587
291 Ga0439440_0081589
292 Ga0495580_0180458
293 Ga0495639_0156249
294 Ga0495628_0002520
295 Ga0495628_0037884
296 Ga0495630_0040396
297 Ga0495645_0358396
298 Ga0495667_0504161
299 Ga0495658_0136400
300 Ga0495658_0271374
301 Ga0495613_0091977
302 Ga0495600_0303476
303 Ga0495684_0010594
304 Ga0496102_0694518
305 Ga0496106_0032013
306 Ga0496109_0167597
307 Ga0496112_0125721
308 Ga0501032_0105990
309 Ga0501033_0149474
310 Ga0501036_0124230
311 Ga0501036_0131528
312 Ga0501036_0555304
313 Ga0501037_0181896
314 Ga0501038_0051186
315 Ga0501038_0262721
316 Ga0501038_0368969
317 Ga0501039_0001562
318 Ga0501039_0020092
319 Ga0501039_0534595
320 Ga0501040_0008194
321 Ga0501040_0008627
322 Ga0501040_0218206
323 Ga0501041_0042148
324 Ga0501041_0083864
325 Ga0501041_0178098
326 Ga0501041_0335311
327 Ga0501041_0427442
328 Ga0501043_0010603
329 Ga0501043_0571815
330 Ga0501046_0130500
331 Ga0501046_0235561
332 Ga0501046_0348398
333 Ga0501048_0116292
334 Ga0501068_0002418
335 Ga0501068_0023618
336 Ga0501068_0086918
337 Ga0501069_0062052
338 Ga0501070_0579444
339 Ga0501071_0072155
340 Ga0501071_0083738
341 Ga0501071_0230133
342 Ga0501072_0007298
343 Ga0501072_0032020
344 Ga0501072_0046202
345 Ga0501072_0058627
346 Ga0501072_0064443
347 Ga0501072_0082710
348 Ga0501072_0349364
349 Ga0501072_0418546
350 Ga0501073_0134981
351 Ga0501074_0062391
352 Ga0501074_0202533
353 Ga0501074_0255453
354 Ga0501075_0005663
355 Ga0501075_0025385
356 Ga0501075_0028514
357 Ga0501075_0123902
358 Ga0501075_0590613
359 Ga0501076_0008285
360 Ga0501076_0014118
361 Ga0501076_0039711
362 Ga0501076_0570037
363 Ga0501077_0002450
364 Ga0501077_0117226
365 Ga0501079_0008873
366 Ga0501079_0057351
367 Ga0501079_0067008
368 Ga0501079_0234531
369 Ga0501079_0473230
370 Ga0501080_0096970
371 Ga0501080_0198899
372 Ga0501080_0263586
373 Ga0501081_0001591
374 Ga0501081_0005138
375 Ga0501081_0190856
376 Ga0501081_0377591
377 Ga0501083_0250236
378 Ga0501035_0140824
379 Ga0501045_0013090
380 Ga0501045_0101128
381 nmdc:mga05p37_16900_c1
382 nmdc:mga05p37_260902_c1
383 nmdc:mga05p37_41441_c1
384 nmdc:mga05p37_55240_c1
385 nmdc:mga05p37_93371_c1
386 nmdc:mga09592_11164_c1
387 nmdc:mga09592_208949_c1
388 nmdc:mga09592_38946_c1
389 nmdc:mga09592_83176_c1
390 nmdc:mga0qj67_148543_c1
391 nmdc:mga0qj67_26996_c1
392 nmdc:mga0qj67_28647_c1
393 nmdc:mga06r32_133844_c1
394 nmdc:mga06r32_282847_c1
395 nmdc:mga06r32_2915_c1
396 nmdc:mga06r32_38985_c1
397 nmdc:mga06r32_74230_c1
398 nmdc:mga08y16_118688_c1
399 nmdc:mga08y16_12658_c1
400 nmdc:mga08y16_210198_c1
401 nmdc:mga08y16_219610_c1
402 nmdc:mga08y16_551011_c1
403 nmdc:mga08y16_979485_c1
404 nmdc:mga0rr50_795469_c1
405 nmdc:mga0a205_124888_c1
406 nmdc:mga0a205_361461_c1
407 Ga0495612_0004020
408 Ga0501084_0019221
409 Ga0501084_0070001
410 Ga0501084_0234195
411 Ga0501084_0247783
412 Ga0501084_0445490
413 Ga0501082_0018818
414 Ga0501082_0038447
415 Ga0501082_0062819
416 Ga0501082_0136943
417 Ga0501082_0324960
418 Ga0530510_0008468
419 Ga0530510_0011398
420 Ga0530510_0012839
421 Ga0530510_0025227
422 Ga0530510_0059779
423 Ga0530510_0310074
424 Ga0530510_0354061

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03641

Lysine_decarbox

Possible lysine decarboxylase

131

261

0.93

PF18306

LDcluster4

SLOG cluster4 family

87

211

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
1weh-assembly2.cif.gz_B crystal structure of the conserved hypothetical protein tt1887 from thermus thermophilus hb8 0.7998 51 228
1weh-assembly2.cif.gz_B crystal structure of the conserved hypothetical protein tt1887 from thermus thermophilus hb8 0.7875 51 228
1ydh-assembly1.cif.gz_B x-ray structure of a lysine decarboxylase-like protein from arabidopsis thaliana gene at5g11950 0.7694 50 228
3sbx-assembly4.cif.gz_H crystal structure of a putative uncharacterized protein from mycobacterium marinum bound to adenosine 5'-monophosphate amp 0.7684 50 224
7w2i-assembly1.cif.gz_D crystal structure of log (rv1205) from mycobacterium tuberculosis 0.7663 51 224
ID Description Score Start End Superfamily
1wehB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.798 52 228 3.40.50.450
1wehB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.7855 52 228 3.40.50.450
af_Q4CYG8_66_324_3.40.50.450 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.7619 52 229 3.40.50.450
4mdcA01 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.7602 54 89 3.40.30.10
af_A0A1D6K2U3_1_187_3.40.50.450 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.758 45 226 3.40.50.450
ID Description Score Start End GO Terms
AF-A0A2V6HB12-F1-model_v4 Lysine decarboxylase 0.8696 126 240 GO:0005829
AF-A0A2V6HB12-F1-model_v4 Lysine decarboxylase 0.8625 126 240 GO:0005829
AF-A0A124WSB2-F1-model_v4 deleted 0.8316 52 232
AF-A0A6M1N2P4-F1-model_v4 Cytokinin riboside 5'-monophosphate phosphoribohydrolase (EC 3.2.2.n1) 0.8287 50 233 GO:0005829
GO:0009691
GO:0016787
AF-A0A2V8MHB6-F1-model_v4 LOG family protein 0.8287 46 230 GO:0005829

Map