F322211

General Info

Members Datasets Scaffolds Average Seq Length
211 168 150 402

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2671180195|2671833607
Length 438
Sequence SPQEMTSSDESDYSHDTDYSNGTDGTGHRGRGGGGRQVVVTGVGLTTPLGGDVADSWAGVLAGRSGVLALTVPWASELPVRIAAPVAVEPPLARVEARSLDRGQQLAVVAAREAWADAGDPALEPERLAVVIGSGVGGVTTLLSQSDIFRDRGHRRVSPFLVPMIMPNGPASAVGLALGARAGVHAPVSACASGAEAIAYGLDLIQLGRADVVVAGGTEAAVHPLPLTGFAQMQALSRRNDDPGSASRPFDKSRDGFVLGEGAGVLVLEAAEHAAARGARVLATLGGAGISSDAHHVAAPDPTGAGAARAIRHALTAAGIGPEDVVHVNAHASATPAGDVAESRGLRAALGPALDGVAVTSTKSMTGHLLGASGAVEAVFAVLSLRDGLAPATRNLTSLDDEIHLDVVAVDNRPLRPGAVLSTSFGFGGHDVCLVFLR

Samples

Sample ID Description Type Environment
1 2506783011 Frankia datiscae Dg1 Isolate Nodule
2 2508501039 Frankia saprophytica CN3 Isolate Nodule
3 2517572101 Frankia sp. DC12 Isolate Nodule
4 2527291627 Frankia casuarinae Thr Isolate Nodule
5 2527291629 Frankia sp. BMG5.23 Isolate Nodule
6 2546825537 Frankia sp. CcI6 Isolate Rhizoplane
7 2558860280 Kutzneria sp. 744 Isolate Unclassified
8 2576861822 Frankia sp. CeD Isolate Nodule
9 2579778521 Frankia torreyi CpI1-S Isolate Unclassified
10 2619618881 Frankia sp. ACN1ag Isolate Unclassified
11 2619619003 Frankia sp. CpI1-P Isolate Nodule
12 2626541554 Frankia sp. AvcI.1 Isolate Nodule
13 2671180195 Frankia sp. CcI49 Isolate Nodule
14 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
15 2684623035 Frankia sp. NRRL B-16219 Isolate Rhizosphere
16 2684623036 Frankia sp. CgIM4 Isolate Nodule
17 2687453737 Frankia sp. BMG5.36 Isolate Nodule
18 2687453743 Frankia colletiae Cc1.17 Isolate Nodule
19 2710264753 Frankia sp. KB5 Isolate Nodule
20 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
21 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
22 2773857922 Frankia sp. CcI49 Isolate Nodule
23 2773857924 Frankia sp. CgIS1 Isolate Nodule
24 2773857933 Frankia sp. BMG5.30 Isolate Nodule
25 2784132109 Dermacoccus sp. DS28 SAI-028 Isolate Unclassified
26 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
27 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
28 2844849076 Arthrobacter cupressi DSM 24664 Isolate Rhizosphere
29 2852677369 Pseudoclavibacter sp. JAI123 Isolate Rhizosphere
30 2857479173 Micrococcus sp. R-74225 Isolate Unclassified
31 2857632687 Micrococcus sp. R-73081 Isolate Unclassified
32 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
33 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
34 2870801768 Micrococcus endophyticus DSM 17945 Isolate Unclassified
35 2870804320 Micrococcus yunnanensis DSM 21948 Isolate Unclassified
36 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
37 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
38 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
39 2919059106 Arthrobacter sp. 1088 Isolate Rhizosphere
40 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
41 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
42 2946024296 Arthrobacter woluwensis W4I2 Isolate Rhizosphere
43 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
44 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
45 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
46 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
47 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
48 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
49 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
50 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
51 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
52 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
53 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
54 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
55 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
56 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
57 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
58 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
59 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
60 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
61 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
62 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
63 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
64 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
65 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
66 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
67 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
68 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
69 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
70 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
71 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
72 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
73 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
74 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
75 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
76 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
77 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
78 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
79 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
80 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
81 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
82 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
83 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
84 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
85 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
86 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
87 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
88 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
89 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
91 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
92 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
93 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
94 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
95 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
112 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
114 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
115 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
116 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
117 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
118 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
119 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
120 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
121 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
122 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
123 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
124 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
125 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
126 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
127 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
128 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
129 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
130 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
131 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
132 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
133 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
134 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
135 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
136 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
137 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
138 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
139 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
140 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
141 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
142 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
143 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
144 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
145 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
146 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
147 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
148 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
149 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
150 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
151 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
152 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
153 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
154 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
158 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
159 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
160 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
161 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
162 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
163 637000116 Frankia casuarinae CcI3 Isolate Nodule
164 8002775197 Frankia nepalensis CN7 Isolate Nodule
165 8002784119 Frankia sp. AgB1.9 Isolate Nodule
166 8054913762 Frankia gtarii Agncl-10 Isolate Nodule
167 8054920844 Frankia tisae Agncl-8 Isolate Nodule
168 8055157932 Frankia umida Ag45/Mut15 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 67.77
Metatranscriptomes 3.32
Isolates 28.91

Biome Distribution

Category Percentage (%)
Aerial Root 0.47
Bulb 0
Endosphere 5.69
Nodule 16.11
Rhizoplane 2.84
Rhizosphere 56.87
Stem 0
Stem Tuber 0
Unclassified 18.01

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10021591 3300001979 Bacteria 2230
2 JGI25152J39213_1001128 3300002773 Bacteria 12435
3 Ga0055539_1000006 3300003752 Bacteria 580055
4 Ga0055533_1000002 3300003756 Bacteria 1196393
5 Ga0055525_1000205 3300003759 Bacteria 67917
6 Ga0055541_1001533 3300003841 Bacteria 4971
7 Ga0070658_10002114 3300005327 Bacteria 16673
8 Ga0068869_100006237 3300005334 Bacteria 7550
9 Ga0070680_100000403 3300005336 Bacteria 29539
10 Ga0070674_100251239 3300005356 Bacteria 1389
11 Ga0070700_100112958 3300005441 Bacteria 1809
12 Ga0070663_100072082 3300005455 Bacteria 2515
13 Ga0070662_100142302 3300005457 Bacteria 1860
14 Ga0070681_10000330 3300005458 Bacteria 38500
15 Ga0070679_100000591 3300005530 Bacteria 30747
16 Ga0068853_100030046 3300005539 Bacteria 4587
17 Ga0070686_100000021 3300005544 Bacteria 131944
18 Ga0070696_100079040 3300005546 Bacteria 2327
19 Ga0068859_100000175 3300005617 Bacteria 62621
20 Ga0068859_100013503 3300005617 Bacteria 8190
21 Ga0068863_100002408 3300005841 Bacteria 18584
22 Ga0068858_100000003 3300005842 Bacteria 349151
23 Ga0068858_100006547 3300005842 Bacteria 11329
24 Ga0068862_100000256 3300005844 Bacteria 59069
25 Ga0068862_100162307 3300005844 Bacteria 1995
26 Ga0081455_10008500 3300005937 Bacteria 10665
27 Ga0070717_10114531 3300006028 Bacteria 2304
28 Ga0070715_10030035 3300006163 Bacteria 2194
29 Ga0075428_100065602 3300006844 Bacteria 3976
30 Ga0075430_100194184 3300006846 Bacteria 1687
31 Ga0075433_10007725 3300006852 Bacteria 8544
32 Ga0075433_10153776 3300006852 Bacteria 2046
33 Ga0075433_10269348 3300006852 Bacteria 1509
34 Ga0097620_100000175 3300006931 Bacteria 62621
35 Ga0097620_100013503 3300006931 Bacteria 8190
36 Ga0075435_100088625 3300007076 Bacteria 2551
37 Ga0111539_10001385 3300009094 Bacteria 32227
38 Ga0111539_10209129 3300009094 Bacteria 2273
39 Ga0105247_10000014 3300009101 Bacteria 285043
40 Ga0105247_10000404 3300009101 Bacteria 36638
41 Ga0114129_10000087 3300009147 Bacteria 86722
42 Ga0105248_10000072 3300009177 Bacteria 117576
43 Ga0105248_10038435 3300009177 Bacteria 5356
44 Ga0105238_10000003 3300009551 Bacteria 422077
45 Ga0105238_10039449 3300009551 Bacteria 4789
46 Ga0105249_10014483 3300009553 Bacteria 6971
47 Ga0163163_10040598 3300014325 Bacteria 4544
48 Ga0157379_10000053 3300014968 Bacteria 72623
49 Ga0157379_10017705 3300014968 Bacteria 6277
50 Ga0197907_10189146 3300020069 Bacteria 5750
51 Ga0206356_10765675 3300020070 Bacteria 4967
52 Ga0206350_11039832 3300020080 Bacteria 2457
53 Ga0206354_10301190 3300020081 Bacteria 4204
54 Ga0206353_10531133 3300020082 Bacteria 12645
55 Ga0224712_10001879 3300022467 Bacteria 5048
56 Ga0224712_10044917 3300022467 Bacteria 1688
57 Ga0209566_100013 3300025225 Bacteria 474033
58 Ga0209674_100001 3300025226 Bacteria 4013750
59 Ga0209563_100001 3300025230 Bacteria 4013775
60 Ga0209563_100246 3300025230 Bacteria 25714
61 Ga0209677_100001 3300025253 Bacteria 4013787
62 Ga0209129_1000100 3300025258 Bacteria 162353
63 Ga0209025_1000340 3300025294 Bacteria 102910
64 Ga0207710_10000020 3300025900 Bacteria 338425
65 Ga0207710_10000031 3300025900 Bacteria 285157
66 Ga0207685_10041367 3300025905 Bacteria 1724
67 Ga0207643_10066569 3300025908 Bacteria 2066
68 Ga0207705_10001248 3300025909 Bacteria 20441
69 Ga0207707_10000764 3300025912 Bacteria 31604
70 Ga0207660_10000513 3300025917 Bacteria 25855
71 Ga0207652_10000504 3300025921 Bacteria 39783
72 Ga0207694_10000020 3300025924 Bacteria 310240
73 Ga0207694_10025750 3300025924 Bacteria 4472
74 Ga0207706_10000157 3300025933 Bacteria 75435
75 Ga0207711_10000521 3300025941 Bacteria 39535
76 Ga0207711_10005007 3300025941 Bacteria 11239
77 Ga0207712_10006509 3300025961 Bacteria 7367
78 Ga0207703_10000006 3300026035 Bacteria 502351
79 Ga0207639_10009614 3300026041 Bacteria 6678
80 Ga0207678_10000164 3300026067 Bacteria 55873
81 Ga0207708_10137316 3300026075 Bacteria 1916
82 Ga0207641_10002519 3300026088 Bacteria 16880
83 Ga0207428_10000199 3300027907 Bacteria 83918
84 Ga0268265_10000019 3300028380 Bacteria 285487
85 Ga0307517_10057801 3300028786 Bacteria 3750
86 Ga0307511_10000436 3300030521 Bacteria 44626
87 Ga0307511_10007800 3300030521 Bacteria 10756
88 Ga0307513_10212922 3300031456 Bacteria 1762
89 Ga0316576_10002954 3300031727 Bacteria 9860
90 Ga0316576_10058369 3300031727 Bacteria 2822
91 Ga0316578_10038180 3300031728 Bacteria 2768
92 Ga0307406_10143623 3300031901 Bacteria 1693
93 Ga0316583_10000240 3300032133 Bacteria 14849
94 Ga0316580_10007758 3300032139 Bacteria 3202
95 Ga0307510_10079791 3300033180 Bacteria 3188
96 Ga0373959_0000338 3300034820 Bacteria 9563
97 Ga0395899_0033727 3300037312 Bacteria 3845
98 Ga0395898_0002099 3300037466 Bacteria 24758
99 Ga0395905_0012530 3300037471 Bacteria 8158
100 Ga0436364_1264615 3300037853 Bacteria 29700
101 Ga0395901_0050498 3300038443 Bacteria 4321
102 Ga0395901_0236114 3300038443 Bacteria 1908
103 Ga0451806_880368 3300041462 Bacteria 1853
104 Ga0451841_0609337 3300041498 Bacteria 1584
105 Ga0451577_0001636 3300042876 Bacteria 29026
106 Ga0466969_0001857 3300044656 Bacteria 11297
107 Ga0466969_0108161 3300044656 Bacteria 1303
108 Ga0466972_0040108 3300044658 Bacteria 2282
109 Ga0466966_0010761 3300044684 Bacteria 6081
110 Ga0466961_0026634 3300044693 Bacteria 3716
111 Ga0466963_0021960 3300044694 Bacteria 4035
112 Ga0453684_0012249 3300044712 Bacteria 14202
113 Ga0466959_0002465 3300045049 Bacteria 11839
114 Ga0451576_0032587 3300045051 Bacteria 5545
115 Ga0495648_0037688 3300046524 Bacteria 3103
116 Ga0495683_0074552 3300047323 Bacteria 1663
117 Ga0495687_011751 3300047443 Bacteria 4681
118 Ga0496110_0051446 3300048913 Bacteria 3620
119 Ga0496112_0115223 3300048915 Bacteria 2658
120 Ga0496114_0050759 3300048917 Bacteria 3453
121 Ga0496116_0001555 3300048919 Bacteria 25386
122 Ga0496117_0005809 3300048920 Bacteria 12787
123 Ga0496117_0016342 3300048920 Bacteria 6265
124 Ga0496117_0019901 3300048920 Bacteria 5492
125 Ga0496118_0000605 3300048921 Bacteria 59079
126 Ga0496118_0015135 3300048921 Bacteria 7162
127 Ga0496118_0015905 3300048921 Bacteria 6934
128 Ga0496119_0000373 3300048922 Bacteria 61923
129 Ga0496119_0003572 3300048922 Bacteria 16055
130 Ga0496119_0005324 3300048922 Bacteria 12382
131 Ga0496119_0011224 3300048922 Bacteria 7455
132 Ga0496120_0000156 3300048923 Bacteria 112926
133 Ga0496121_0007896 3300048924 Bacteria 12735
134 Ga0496121_0022447 3300048924 Bacteria 6125
135 Ga0496123_0013775 3300048926 Bacteria 6754
136 Ga0496124_0000363 3300048927 Bacteria 82857
137 Ga0496124_0014803 3300048927 Bacteria 7521
138 Ga0496125_0218535 3300048928 Bacteria 1230
139 Ga0501036_0171147 3300049572 Bacteria 1830
140 Ga0501041_0067691 3300049577 Bacteria 2189
141 Ga0501047_0308951 3300049581 Bacteria 1422
142 Ga0501070_0011142 3300049586 Bacteria 7590
143 Ga0501076_0090066 3300049592 Bacteria 2467
144 nmdc:mga05p37_2207_c1 3300050507 Bacteria 22680
145 nmdc:mga08y16_172831_c1 3300050511 Bacteria 2244
146 nmdc:mga08y16_25680_c1 3300050511 Bacteria 6216
147 nmdc:mga0n895_209682_c1 3300050512 Bacteria 1979
148 nmdc:mga0a205_1240_c1 3300050515 Bacteria 21376
149 nmdc:mga0a205_37912_c1 3300050515 Bacteria 4635
150 nmdc:mga0a205_625_c1 3300050515 Bacteria 28107

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300038443 Ga0395901_0236114 Ga0395901_0236114_51_1178 349
2 3300047323 Ga0495683_0074552 Ga0495683_0074552_23_1120 355
3 3300031901 Ga0307406_10143623 Ga0307406_101436232 362
4 3300049586 Ga0501070_0011142 Ga0501070_0011142_303_1517 362
5 3300048919 Ga0496116_0001555 Ga0496116_0001555_22279_23442 368
6 3300048920 Ga0496117_0016342 Ga0496117_0016342_3145_4308 368
7 3300048921 Ga0496118_0015905 Ga0496118_0015905_3828_4991 368
8 3300048922 Ga0496119_0003572 Ga0496119_0003572_12851_14014 368
9 3300009177 Ga0105248_10000072 Ga0105248_1000007224 369
10 3300048920 Ga0496117_0019901 Ga0496117_0019901_2678_3841 369
11 3300048921 Ga0496118_0015135 Ga0496118_0015135_2901_4064 369
12 3300049572 Ga0501036_0171147 Ga0501036_0171147_17_1255 370
13 3300049577 Ga0501041_0067691 Ga0501041_0067691_751_1989 370
14 3300006852 Ga0075433_10007725 Ga0075433_100077252 371
15 3300007076 Ga0075435_100088625 Ga0075435_1000886253 371
16 3300009094 Ga0111539_10209129 Ga0111539_102091292 371
17 3300050511 nmdc:mga08y16_172831_c1 nmdc:mga08y16_172831_c1_394_1581 371
18 3300050512 nmdc:mga0n895_209682_c1 nmdc:mga0n895_209682_c1_567_1754 371
19 3300050515 nmdc:mga0a205_37912_c1 nmdc:mga0a205_37912_c1_1891_3078 371
20 3300048924 Ga0496121_0022447 Ga0496121_0022447_1650_2813 374
21 3300005546 Ga0070696_100079040 Ga0070696_1000790403 376
22 3300009147 Ga0114129_10000087 Ga0114129_1000008746 376
23 3300050507 nmdc:mga05p37_2207_c1 nmdc:mga05p37_2207_c1_3543_4688 376
24 3300005327 Ga0070658_10002114 Ga0070658_100021148 379
25 3300005336 Ga0070680_100000403 Ga0070680_10000040323 379
26 3300005458 Ga0070681_10000330 Ga0070681_1000033022 379
27 3300005530 Ga0070679_100000591 Ga0070679_1000005919 379
28 3300020069 Ga0197907_10189146 Ga0197907_101891464 379
29 3300020070 Ga0206356_10765675 Ga0206356_107656753 379
30 3300020080 Ga0206350_11039832 Ga0206350_110398322 379
31 3300020081 Ga0206354_10301190 Ga0206354_103011904 379
32 3300020082 Ga0206353_10531133 Ga0206353_1053113310 379
33 3300022467 Ga0224712_10001879 Ga0224712_100018794 379
34 3300025909 Ga0207705_10001248 Ga0207705_1000124820 379
35 3300025912 Ga0207707_10000764 Ga0207707_1000076424 379
36 3300025917 Ga0207660_10000513 Ga0207660_1000051318 379
37 3300025921 Ga0207652_10000504 Ga0207652_1000050430 379
38 3300002773 JGI25152J39213_1001128 JGI25152J39213_10011288 380
39 3300025258 Ga0209129_1000100 Ga0209129_100010099 380
40 3300025294 Ga0209025_1000340 Ga0209025_100034054 380
41 3300009553 Ga0105249_10014483 Ga0105249_100144834 382
42 3300048928 Ga0496125_0218535 Ga0496125_0218535_34_1197 382
43 3300044658 Ga0466972_0040108 Ga0466972_0040108_872_2134 383
44 3300037466 Ga0395898_0002099 Ga0395898_0002099_2467_3717 385
45 3300038443 Ga0395901_0050498 Ga0395901_0050498_2111_3361 385
46 3300049592 Ga0501076_0090066 Ga0501076_0090066_968_2206 386
47 3300005334 Ga0068869_100006237 Ga0068869_1000062374 388
48 3300005457 Ga0070662_100142302 Ga0070662_1001423022 388
49 3300005844 Ga0068862_100162307 Ga0068862_1001623072 388
50 3300006844 Ga0075428_100065602 Ga0075428_1000656022 388
51 3300006852 Ga0075433_10153776 Ga0075433_101537761 388
52 3300006852 Ga0075433_10269348 Ga0075433_102693481 388
53 3300009094 Ga0111539_10001385 Ga0111539_1000138517 388
54 3300025941 Ga0207711_10000521 Ga0207711_1000052123 388
55 3300027907 Ga0207428_10000199 Ga0207428_1000019950 388
56 3300042876 Ga0451577_0001636 Ga0451577_0001636_892_2079 388
57 3300044712 Ga0453684_0012249 Ga0453684_0012249_6887_8074 388
58 3300045051 Ga0451576_0032587 Ga0451576_0032587_3371_4558 388
59 3300050511 nmdc:mga08y16_25680_c1 nmdc:mga08y16_25680_c1_856_2043 388
60 3300050515 nmdc:mga0a205_1240_c1 nmdc:mga0a205_1240_c1_14831_16018 388
61 3300050515 nmdc:mga0a205_625_c1 nmdc:mga0a205_625_c1_25934_27121 388
62 iso_pu_bacteria 2867346516 2867347074 389
63 3300009101 Ga0105247_10000014 Ga0105247_1000001455 390
64 3300009177 Ga0105248_10038435 Ga0105248_100384355 390
65 3300014325 Ga0163163_10040598 Ga0163163_100405981 390
66 3300014968 Ga0157379_10017705 Ga0157379_100177055 390
67 3300025900 Ga0207710_10000031 Ga0207710_10000031175 390
68 3300025941 Ga0207711_10005007 Ga0207711_100050075 390
69 3300048922 Ga0496119_0000373 Ga0496119_0000373_41325_42551 390
70 3300048923 Ga0496120_0000156 Ga0496120_0000156_70366_71592 390
71 3300006163 Ga0070715_10030035 Ga0070715_100300352 394
72 3300025905 Ga0207685_10041367 Ga0207685_100413672 394
73 3300046524 Ga0495648_0037688 Ga0495648_0037688_238_1440 395
74 3300005841 Ga0068863_100002408 Ga0068863_1000024089 396
75 3300026088 Ga0207641_10002519 Ga0207641_1000251915 396
76 3300028786 Ga0307517_10057801 Ga0307517_100578012 399
77 3300048913 Ga0496110_0051446 Ga0496110_0051446_1687_2901 399
78 3300048917 Ga0496114_0050759 Ga0496114_0050759_52_1266 399
79 iso_pu_bacteria 2506783011 2506868133 399
80 iso_pu_bacteria 2527291627 2528203768 399
81 iso_pu_bacteria 2527291629 2528213489 399
82 iso_pu_bacteria 2546825537 2546948064 399
83 iso_pu_bacteria 2576861822 2579748776 399
84 iso_pu_bacteria 2579778521 2579853088 399
85 iso_pu_bacteria 2619618881 2619855905 399
86 iso_pu_bacteria 2619619003 2620348347 399
87 iso_pu_bacteria 2626541554 2626635396 399
88 iso_pu_bacteria 2671180195 2671835024 399
89 iso_pu_bacteria 2684623035 2686535769 399
90 iso_pu_bacteria 2684623036 2686541694 399
91 iso_pu_bacteria 2687453743 2689990902 399
92 iso_pu_bacteria 2710264753 2710603098 399
93 iso_pu_bacteria 2751185788 2753302076 399
94 iso_pu_bacteria 2773857922 2774853180 399
95 iso_pu_bacteria 2773857924 2774864678 399
96 iso_pu_bacteria 2773857933 2774902556 399
97 iso_pu_bacteria 2844849076 2844852129 399
98 iso_pu_bacteria 2895880812 2895889906 399
99 iso_pu_bacteria 2919042368 2919043761 399
100 iso_pu_bacteria 2919059106 2919063406 399
101 iso_pu_bacteria 2928104781 2928106821 399
102 iso_pu_bacteria 2984551494 2984554216 399
103 iso_pu_bacteria 637000116 637880806 399
104 iso_pu_bacteria 8002775197 8002781143 399
105 iso_pu_bacteria 8054913762 8054920305 399
106 iso_pu_bacteria 8054920844 8054921091 399
107 iso_pu_bacteria 8055157932 8055163116 399
108 3300005842 Ga0068858_100000003 Ga0068858_100000003162 400
109 3300009101 Ga0105247_10000404 Ga0105247_1000040411 400
110 3300014968 Ga0157379_10000053 Ga0157379_1000005344 400
111 3300025900 Ga0207710_10000020 Ga0207710_10000020187 400
112 3300026035 Ga0207703_10000006 Ga0207703_10000006233 400
113 3300048922 Ga0496119_0005324 Ga0496119_0005324_9653_10879 400
114 3300048924 Ga0496121_0007896 Ga0496121_0007896_6572_7798 400
115 iso_pu_bacteria 2508501039 2508678704 400
116 iso_pu_bacteria 2517572101 2517760268 400
117 iso_pu_bacteria 2671180195 2671833607 400
118 iso_pu_bacteria 2675902999 2676200422 400
119 iso_pu_bacteria 2687453737 2689957671 400
120 iso_pu_bacteria 2710264753 2710605400 400
121 iso_pu_bacteria 2773857921 2774845000 400
122 iso_pu_bacteria 2773857922 2774851763 400
123 iso_pu_bacteria 8002784119 8002791390 400
124 3300005617 Ga0068859_100000175 Ga0068859_10000017521 401
125 3300005617 Ga0068859_100013503 Ga0068859_1000135035 401
126 3300005842 Ga0068858_100006547 Ga0068858_1000065478 401
127 3300005844 Ga0068862_100000256 Ga0068862_10000025619 401
128 3300006931 Ga0097620_100000175 Ga0097620_10000017521 401
129 3300006931 Ga0097620_100013503 Ga0097620_1000135035 401
130 3300025961 Ga0207712_10006509 Ga0207712_100065094 401
131 3300028380 Ga0268265_10000019 Ga0268265_1000001963 401
132 3300037853 Ga0436364_1264615 Ga0436364_1264615_7624_8865 401
133 iso_pu_bacteria 2558860280 2559425770 401
134 iso_pu_bacteria 2852677369 2852679170 401
135 iso_pu_bacteria 2857479173 2857479455 401
136 iso_pu_bacteria 2857632687 2857633166 401
137 iso_pu_bacteria 2866612099 2866616941 401
138 iso_pu_bacteria 2870801768 2870802722 401
139 iso_pu_bacteria 2870804320 2870804806 401
140 iso_pu_bacteria 2964326757 2964329516 401
141 3300006846 Ga0075430_100194184 Ga0075430_1001941842 402
142 iso_pu_bacteria 2684623036 2686543978 402
143 iso_pu_bacteria 2710264753 2710604705 402
144 3300005356 Ga0070674_100251239 Ga0070674_1002512391 403
145 3300005937 Ga0081455_10008500 Ga0081455_100085006 403
146 3300030521 Ga0307511_10000436 Ga0307511_100004365 403
147 3300048915 Ga0496112_0115223 Ga0496112_0115223_1212_2498 403
148 3300048920 Ga0496117_0005809 Ga0496117_0005809_5808_7028 403
149 3300048921 Ga0496118_0000605 Ga0496118_0000605_5290_6510 403
150 3300048922 Ga0496119_0011224 Ga0496119_0011224_1216_2436 403
151 3300048926 Ga0496123_0013775 Ga0496123_0013775_2124_3344 403
152 3300048927 Ga0496124_0000363 Ga0496124_0000363_28547_29767 403
153 iso_pu_bacteria 2527291627 2528205728 403
154 iso_pu_bacteria 2527291629 2528215547 403
155 iso_pu_bacteria 2546825537 2546950749 403
156 iso_pu_bacteria 2576861822 2579750636 403
157 iso_pu_bacteria 2773857924 2774866690 403
158 iso_pu_bacteria 637000116 637879271 403
159 3300005441 Ga0070700_100112958 Ga0070700_1001129581 404
160 3300005455 Ga0070663_100072082 Ga0070663_1000720822 404
161 3300005539 Ga0068853_100030046 Ga0068853_1000300464 404
162 3300006028 Ga0070717_10114531 Ga0070717_101145313 404
163 3300009551 Ga0105238_10039449 Ga0105238_100394494 404
164 3300025924 Ga0207694_10025750 Ga0207694_100257504 404
165 3300026041 Ga0207639_10009614 Ga0207639_100096143 404
166 3300026067 Ga0207678_10000164 Ga0207678_1000016437 404
167 3300026075 Ga0207708_10137316 Ga0207708_101373162 404
168 3300030521 Ga0307511_10007800 Ga0307511_100078006 404
169 3300044656 Ga0466969_0001857 Ga0466969_0001857_4114_5346 404
170 3300044656 Ga0466969_0108161 Ga0466969_0108161_24_1256 404
171 3300044684 Ga0466966_0010761 Ga0466966_0010761_736_1968 404
172 3300044693 Ga0466961_0026634 Ga0466961_0026634_627_1859 404
173 3300045049 Ga0466959_0002465 Ga0466959_0002465_3222_4454 404
174 iso_pu_bacteria 2904497146 2904500658 404
175 iso_pu_bacteria 2946024296 2946026218 404
176 3300005544 Ga0070686_100000021 Ga0070686_10000002115 405
177 3300009551 Ga0105238_10000003 Ga0105238_10000003217 405
178 3300022467 Ga0224712_10044917 Ga0224712_100449172 405
179 3300025908 Ga0207643_10066569 Ga0207643_100665692 405
180 3300025924 Ga0207694_10000020 Ga0207694_10000020153 405
181 3300025933 Ga0207706_10000157 Ga0207706_1000015770 405
182 3300031456 Ga0307513_10212922 Ga0307513_102129222 405
183 3300031727 Ga0316576_10002954 Ga0316576_100029547 405
184 3300031727 Ga0316576_10058369 Ga0316576_100583692 405
185 3300031728 Ga0316578_10038180 Ga0316578_100381803 405
186 3300032133 Ga0316583_10000240 Ga0316583_1000024013 405
187 3300032139 Ga0316580_10007758 Ga0316580_100077584 405
188 3300034820 Ga0373959_0000338 Ga0373959_0000338_3712_4959 405
189 3300037312 Ga0395899_0033727 Ga0395899_0033727_1481_2728 405
190 3300037471 Ga0395905_0012530 Ga0395905_0012530_1919_3166 405
191 3300041462 Ga0451806_880368 Ga0451806_880368_394_1632 405
192 3300044694 Ga0466963_0021960 Ga0466963_0021960_209_1471 405
193 iso_pu_bacteria 2844841374 2844844651 405
194 iso_pu_bacteria 2919468124 2919469229 405
195 3300048927 Ga0496124_0014803 Ga0496124_0014803_3493_4767 406
196 iso_pu_bacteria 2784132109 2784472492 406
197 iso_pu_bacteria 2808606982 2811842353 406
198 3300049581 Ga0501047_0308951 Ga0501047_0308951_46_1275 408
199 3300003752 Ga0055539_1000006 Ga0055539_1000006517 409
200 3300003756 Ga0055533_1000002 Ga0055533_1000002602 409
201 3300003759 Ga0055525_1000205 Ga0055525_100020550 409
202 3300003841 Ga0055541_1001533 Ga0055541_10015336 409
203 3300025225 Ga0209566_100013 Ga0209566_100013186 409
204 3300025226 Ga0209674_100001 Ga0209674_1000012961 409
205 3300025230 Ga0209563_100001 Ga0209563_1000012961 409
206 3300025253 Ga0209677_100001 Ga0209677_1000012961 409
207 3300033180 Ga0307510_10079791 Ga0307510_100797913 409
208 3300001979 JGI24740J21852_10021591 JGI24740J21852_100215912 410
209 3300025230 Ga0209563_100246 Ga0209563_10024624 410
210 3300041498 Ga0451841_0609337 Ga0451841_0609337_96_1331 410
211 3300047443 Ga0495687_011751 Ga0495687_011751_2455_3717 410

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02801

Ketoacyl-synt_C

Beta-ketoacyl synthase, C-terminal domain

282

397

0.96

PF00109

ketoacyl-synt

Beta-ketoacyl synthase, N-terminal domain

35

274

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
4r8e-assembly1.cif.gz_B crystal structure of beta-ketoacyl-acp synthase ii (fabf) from yersinia pestis 0.9563 4 407
2rjt-assembly1.cif.gz_B crystal structure analysis of a surface entropy reduction mutant of s. pneumoniae fabf 0.9558 2 409
1ox0-assembly1.cif.gz_A the crystal structure of beta-ketoacyl-[acyl carrier protein] synthase ii from streptococcus pneumoniae 0.9546 1 407
5sn5-assembly1.cif.gz_A pandda analysis group deposition -- crystal structure of pseudomonas aeruginosa fabf-c164q mutant protein in complex with z2856434897 0.9541 2 409
1e5m-assembly1.cif.gz_A-2 beta ketoacyl acyl carrier protein synthase ii (kasii) from synechocystis sp. 0.9538 4 407
ID Description Score Start End Superfamily
af_Q0E328_1_239_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9681 180 407 3.40.47.10
af_I1N0K0_264_378_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9636 259 366 3.40.47.10
af_C6KT99_32_472_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9581 3 406 3.40.47.10
1j3nB02 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9579 263 401 3.40.47.10
1tqyG02 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.957 259 408 3.40.47.10
ID Description Score Start End GO Terms
AF-A0A6I5GNA8-F1-model_v4 Beta-ketoacyl-ACP synthase 0.9861 204 408 GO:0004315
GO:0005829
GO:0006633
AF-A0A6G4BG03-F1-model_v4 deleted 0.9805 156 290
AF-A0A090QPS8-F1-model_v4 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.179) 0.9804 177 362 GO:0004315
GO:0005829
GO:0006633
AF-A0A858LDZ4-F1-model_v4 Type II PKS ketosynthase alpha subunit (EC 2.3.1.179) 0.9798 166 319 GO:0004315
GO:0005829
GO:0006633
AF-A0A7Y3MDH5-F1-model_v4 Beta-ketoacyl-ACP synthase II (EC 2.3.1.179) 0.978 160 410 GO:0004315
GO:0005829
GO:0006633

Feature Viewer

pLDDT pTM Quality
93.8 0.94 High
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Predicted Structure (AlphaFold2)

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