F321454

General Info

Members Datasets Scaffolds Average Seq Length
211 161 173 389

Family's Representative Sequence

Representative Sequence 3300005985|Ga0081539_10000250|Ga0081539_1000025021
Length 407
Sequence MRPVRHGRTGMTTARTGPGVSRKIFLIATEESGDRLGANLMKVLRQRLGGAVQFEGVGGRAMAIEGLASRFPIEELSIIGFAAVIKNLPAILRRIRETADAVIAAAPDILVIIDSPDFTHRVAKRVRAAAPHIPIVDYVSPTVWAWRPGRARAMKPYIDHVLALLPFEPAAYEELHGPPCSYVGHSLTEQIAQLRPDAAEQKRRDEKPPVLLVLPGSRRSEIRRHMTAFGMTLTKLQAAGVAFEAVLPTMPHLEEAVTAALKYWKVQPRVVIGETEKRAAFRIAHAALAKSGTVTLELALSGVPMVAAYQTGALEAFVVRRALRLNTVILANIVLGENVVPEFLQNNVRSEVLTPALRDVLADTPLRRRQVEAFARIDSIMSTGNQPPSVRAADIVLATMRKARAPA

Samples

Sample ID Description Type Environment
1 2508501128 Bradyrhizobium sp. ARR65 Isolate Nodule
2 2513237096 Bradyrhizobium pachyrhizi USDA 3259 Isolate Nodule
3 2513237137 Bradyrhizobium elkanii USDA 94 Isolate Nodule
4 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule
5 2513237145 Bradyrhizobium elkanii USDA 3254 Isolate Nodule
6 2517572143 Bradyrhizobium elkanii USDA 76 Isolate Nodule
7 2524023228 Bradyrhizobium sp. Th.b2 Isolate Nodule
8 2602042107 Bradyrhizobium sp. NFR13 Isolate Rhizoplane
9 2667528175 Rhizobium tropici NFR14 Isolate Rhizoplane
10 2728368998 Bradyrhizobium macuxiense BR 10303 Isolate Nodule
11 2791355197 Bradyrhizobium sp. C9 Isolate Nodule
12 2837651117 Pseudohoeflea suaedae YC6898 Isolate Unclassified
13 2885374607 Bradyrhizobium sp. NAS96.2 Isolate Unclassified
14 2889033259 Bradyrhizobium sp. CCBAU 051011 Isolate Unclassified
15 2903748898 Bradyrhizobium uaiense UFLA 03-164 Isolate Nodule
16 2904690495 Bradyrhizobium ivorense CI-1B Isolate Nodule
17 2904699407
18 2906610324
19 2906635258 Bradyrhizobium sp. USDA 3458 Isolate Unclassified
20 2906660503 Bradyrhizobium brasilense UFLA 03-321 Isolate Unclassified
21 2908739725 Bradyrhizobium sp. UFLA03-84 Isolate Nodule
22 2908756301 Bradyrhizobium ivorense CI-41S Isolate Nodule
23 2919073203 Tardiphaga robiniae 1155 Isolate Unclassified
24 2922386360 Bradyrhizobium archetypum WSM 1744 Isolate Nodule
25 2922425934
26 2935630451 Bradyrhizobium sp. I1.14.4 Isolate Nodule
27 2941507105 Bradyrhizobium sp. i1.12.3 Isolate Nodule
28 2941515067 Bradyrhizobium sp. i1.14.1 Isolate Nodule
29 2941523033 Bradyrhizobium sp. i1.8.4 Isolate Nodule
30 3003930520 Sinorhizobium sp. BG8 Isolate Unclassified
31 3005474847 Bradyrhizobium sp. CCBAU 53421 Isolate Nodule
32 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
33 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
34 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
35 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
36 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
37 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
38 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
39 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
40 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
41 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
42 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
43 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
44 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
45 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
46 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
47 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
48 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
49 3300006943 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW Metagenome Nodule
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
57 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
58 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
59 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
60 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
61 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
62 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
63 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
64 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
65 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
66 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
67 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
78 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
79 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
80 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
82 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
83 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
84 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
85 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
86 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
87 3300033442 Root nodule microbial communities collected in Santa Monica, California, United States - Edamame nodules 1 Metagenome Nodule
88 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
89 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
90 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
91 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
92 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
93 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
94 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
95 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
96 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
97 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
98 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
99 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
100 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
101 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
102 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
103 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
104 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
105 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
106 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
107 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
108 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
109 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
110 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
111 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
112 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
113 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
114 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
115 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
116 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
117 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
118 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
119 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
132 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
133 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
134 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
135 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
136 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
139 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
140 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
141 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
142 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
143 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
144 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
145 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
146 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
147 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
148 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
149 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
150 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
151 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
152 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
153 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
154 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
155 8006933436 Bradyrhizobium septentrionale 7(2017) Isolate Unclassified
156 8006973647 Bradyrhizobium septentrionale 162S2 Isolate Nodule
157 8018150411 Rhizobium straminoryzae SM12 Isolate Rhizosphere
158 8019555841 Bradyrhizobium sp. JR6.1 Isolate Nodule
159 8019565922 Bradyrhizobium sp. JR3.5 Isolate Nodule
160 8056673599 Bradyrhizobium hereditatis WSM 1738 Isolate Nodule
161 8056689827 Bradyrhizobium semiaridum WSM 1704 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 83.17
Metatranscriptomes 0
Isolates 16.83

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.95
Nodule 14.22
Rhizoplane 1.42
Rhizosphere 57.35
Stem 0
Stem Tuber 0
Unclassified 17.06

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24737J22298_10017303 3300001990 Bacteria 2323
2 JGI25404J52841_10002466 3300003659 Bacteria 3505
3 Ga0070658_10199455 3300005327 Bacteria 1688
4 Ga0070710_10097876 3300005437 Bacteria 1742
5 Ga0068855_100022351 3300005563 Bacteria 7578
6 Ga0068857_100004681 3300005577 Bacteria 11590
7 Ga0068854_100039846 3300005578 Bacteria 3311
8 Ga0068856_100008628 3300005614 Bacteria 9913
9 Ga0068852_100387386 3300005616 Bacteria 1372
10 Ga0081455_10005182 3300005937 Bacteria 14347
11 Ga0081455_10017568 3300005937 Bacteria 6850
12 Ga0081455_10042196 3300005937 Bacteria 4004
13 Ga0081540_1001438 3300005983 Bacteria 20573
14 Ga0081540_1009251 3300005983 Bacteria 6796
15 Ga0081540_1037844 3300005983 Bacteria 2552
16 Ga0081540_1038737 3300005983 Bacteria 2509
17 Ga0081539_10000250 3300005985 Bacteria 125352
18 Ga0081539_10000269 3300005985 Bacteria 119082
19 Ga0081539_10025598 3300005985 Bacteria 3794
20 Ga0070717_10002902 3300006028 Bacteria 12176
21 Ga0070717_10023716 3300006028 Bacteria 4865
22 Ga0070717_10202662 3300006028 Bacteria 1738
23 Ga0075365_10009708 3300006038 Bacteria 5555
24 Ga0070712_100085999 3300006175 Bacteria 2290
25 Ga0075369_10025875 3300006186 Bacteria 2443
26 Ga0099824_1010065 3300006942 Bacteria 11351
27 Ga0099822_1001268 3300006943 Bacteria 28825
28 Ga0105240_10099849 3300009093 Bacteria 3532
29 Ga0105240_10101635 3300009093 Bacteria 3496
30 Ga0105240_10115096 3300009093 Bacteria 3247
31 Ga0105248_10276841 3300009177 Bacteria 1889
32 Ga0105237_10249566 3300009545 Bacteria 1776
33 Ga0105238_10016576 3300009551 Bacteria 7459
34 Ga0099796_10007698 3300010159 Bacteria 2828
35 Ga0105239_10043258 3300010375 Bacteria 4936
36 Ga0105239_10212954 3300010375 Bacteria 2166
37 Ga0157369_10028352 3300013105 Bacteria 6197
38 Ga0157369_10092407 3300013105 Bacteria 3229
39 Ga0157378_10024738 3300013297 Bacteria 5286
40 Ga0157372_10039622 3300013307 Bacteria 5200
41 Ga0163163_10385444 3300014325 Bacteria 1459
42 Ga0157379_10150316 3300014968 Bacteria 2100
43 Ga0213876_10038683 3300021384 Bacteria 2519
44 Ga0213875_10006614 3300021388 Bacteria 6061
45 Ga0213871_10002371 3300021441 Bacteria 3456
46 Ga0209233_1000756 3300025261 Bacteria 14605
47 Ga0209564_1019129 3300025295 Bacteria 2575
48 Ga0209758_1012279 3300025297 Bacteria 4811
49 Ga0207647_10003086 3300025904 Bacteria 12526
50 Ga0207695_10036733 3300025913 Bacteria 5292
51 Ga0207695_10042862 3300025913 Bacteria 4827
52 Ga0207695_10240392 3300025913 Bacteria 1712
53 Ga0207693_10073668 3300025915 Bacteria 2673
54 Ga0207694_10022527 3300025924 Bacteria 4780
55 Ga0207694_10047055 3300025924 Bacteria 3336
56 Ga0207700_10004013 3300025928 Bacteria 8620
57 Ga0207700_10036380 3300025928 Bacteria 3555
58 Ga0207711_10065861 3300025941 Bacteria 3132
59 Ga0207667_10017767 3300025949 Bacteria 7999
60 Ga0207658_10118021 3300025986 Bacteria 2110
61 Ga0207702_10052680 3300026078 Bacteria 3444
62 Ga0207702_10187385 3300026078 Bacteria 1909
63 Ga0207674_10003345 3300026116 Bacteria 19680
64 Ga0209589_1000003 3300027357 Bacteria 629130
65 Ga0209489_100003 3300027361 Bacteria 663105
66 Ga0209700_100003 3300027363 Bacteria 663105
67 Ga0268266_10020602 3300028379 Bacteria 5618
68 Ga0268266_10135387 3300028379 Bacteria 2206
69 Ga0307515_10000274 3300028794 Bacteria 126011
70 Ga0265339_10004105 3300031249 Bacteria 10046
71 Ga0265327_10001294 3300031251 Bacteria 32796
72 Ga0307513_10020747 3300031456 Bacteria 7779
73 Ga0307508_10058266 3300031616 Bacteria 3418
74 Ga0307510_10098264 3300033180 Bacteria 2732
75 Ga0315911_1000001 3300033442 Bacteria 1088602
76 Ga0373933_0000117 3300035724 Bacteria 51348
77 Ga0395898_0158412 3300037466 Bacteria 2165
78 Ga0436364_0949651 3300037853 Bacteria 3940
79 Ga0395901_0069281 3300038443 Bacteria 3674
80 Ga0436365_0042256 3300039437 Bacteria 1309
81 Ga0436365_0042396 3300039437 Bacteria 2660
82 Ga0436365_0494653 3300039437 Bacteria 2226
83 Ga0436360_0877138 3300039438 Bacteria 5780
84 Ga0436363_0057987 3300039450 Bacteria 7283
85 Ga0436363_0500685 3300039450 Bacteria 3705
86 Ga0466963_0127252 3300044694 Bacteria 1757
87 Ga0495603_0008770 3300046455 Bacteria 6112
88 Ga0495603_0026898 3300046455 Bacteria 3474
89 Ga0495638_0009550 3300046460 Bacteria 6797
90 Ga0495651_0098712 3300046462 Bacteria 2179
91 Ga0495607_0026471 3300046501 Bacteria 3598
92 Ga0495620_0053080 3300046515 Bacteria 1718
93 Ga0495637_0020714 3300046520 Bacteria 3020
94 Ga0495640_0015362 3300046533 Bacteria 5764
95 Ga0495667_0094802 3300046559 Bacteria 1932
96 Ga0495668_0026054 3300046616 Bacteria 3320
97 Ga0495661_0024219 3300046665 Bacteria 3930
98 Ga0495669_0042095 3300046684 Bacteria 2030
99 Ga0495613_0156239 3300046689 Bacteria 1625
100 Ga0495674_0146040 3300047319 Bacteria 1986
101 Ga0495673_0042018 3300047469 Bacteria 2055
102 Ga0495602_0176908 3300048088 Bacteria 1650
103 Ga0496115_0065343 3300048918 Bacteria 2938
104 Ga0496116_0005560 3300048919 Bacteria 11625
105 Ga0496117_0081127 3300048920 Bacteria 2130
106 Ga0496117_0119693 3300048920 Bacteria 1620
107 Ga0496121_0020136 3300048924 Bacteria 6623
108 Ga0496121_0058297 3300048924 Bacteria 3193
109 Ga0496121_0068179 3300048924 Bacteria 2879
110 Ga0496122_0068971 3300048925 Bacteria 2535
111 Ga0496123_0009762 3300048926 Bacteria 8582
112 Ga0496123_0120272 3300048926 Bacteria 1479
113 Ga0496125_0000210 3300048928 Bacteria 121786
114 Ga0496125_0009504 3300048928 Bacteria 9980
115 Ga0496126_0001585 3300048929 Bacteria 34700
116 Ga0496126_0034227 3300048929 Bacteria 4773
117 Ga0501031_0099892 3300049568 Bacteria 1893
118 Ga0501032_0010639 3300049569 Bacteria 6624
119 Ga0501032_0084228 3300049569 Bacteria 2113
120 Ga0501033_0002256 3300049570 Bacteria 16517
121 Ga0501033_0031631 3300049570 Bacteria 3974
122 Ga0501033_0042985 3300049570 Bacteria 3366
123 Ga0501036_0180047 3300049572 Bacteria 1779
124 Ga0501037_0000476 3300049573 Bacteria 32421
125 Ga0501037_0095473 3300049573 Bacteria 2149
126 Ga0501038_0005762 3300049574 Bacteria 11469
127 Ga0501038_0074164 3300049574 Bacteria 2879
128 Ga0501038_0075418 3300049574 Bacteria 2850
129 Ga0501039_0021161 3300049575 Bacteria 4989
130 Ga0501039_0067390 3300049575 Bacteria 2779
131 Ga0501039_0146487 3300049575 Bacteria 1855
132 Ga0501040_0045275 3300049576 Bacteria 3000
133 Ga0501042_0013758 3300049578 Bacteria 5511
134 Ga0501043_0007897 3300049579 Bacteria 8410
135 Ga0501043_0042748 3300049579 Bacteria 3561
136 Ga0501046_0007928 3300049580 Bacteria 9297
137 Ga0501046_0031396 3300049580 Bacteria 4305
138 Ga0501046_0076142 3300049580 Bacteria 2600
139 Ga0501047_0038459 3300049581 Bacteria 4629
140 Ga0501047_0259300 3300049581 Bacteria 1586
141 Ga0501047_0308717 3300049581 Bacteria 1423
142 Ga0501067_0064116 3300049583 Bacteria 2034
143 Ga0501069_0089440 3300049585 Bacteria 1741
144 Ga0501070_0037100 3300049586 Bacteria 4069
145 Ga0501070_0232818 3300049586 Bacteria 1509
146 Ga0501073_0068913 3300049589 Bacteria 2465
147 Ga0501080_0032771 3300049742 Bacteria 4847
148 Ga0501035_0014013 3300049822 Bacteria 7396
149 Ga0501035_0186640 3300049822 Bacteria 1784
150 Ga0501035_0245773 3300049822 Bacteria 1521
151 Ga0501044_0025985 3300049823 Bacteria 6203
152 Ga0501044_0037553 3300049823 Bacteria 5062
153 Ga0501044_0140060 3300049823 Bacteria 2408
154 Ga0501044_0199541 3300049823 Bacteria 1959
155 Ga0501045_0112647 3300049824 Bacteria 2017
156 nmdc:mga0yw44_93415_c1 3300050492 Bacteria 1905
157 nmdc:mga0k408_4280_c1 3300050493 Bacteria 7578
158 nmdc:mga0rr50_149931_c1 3300050513 Bacteria 1883
159 nmdc:mga0sz30_36649_c1 3300050516 Bacteria 2051
160 Ga0500644_0003112 3300053088 Bacteria 4107
161 Ga0500651_0001286 3300053093 Bacteria 12507
162 Ga0500650_0002212 3300053098 Bacteria 6316
163 Ga0500556_0000002 3300053104 Bacteria 773626
164 Ga0500595_006759 3300053119 Bacteria 4835
165 Ga0500595_012101 3300053119 Bacteria 3346
166 Ga0500642_0000115 3300053130 Bacteria 37207
167 Ga0500642_0033486 3300053130 Bacteria 2165
168 Ga0500658_0034849 3300053134 Bacteria 1989
169 Ga0500568_0001420 3300053139 Bacteria 15536
170 Ga0500604_0002043 3300053151 Bacteria 5573
171 Ga0500622_0002250 3300053156 Bacteria 14196
172 Ga0500611_002539 3300053727 Bacteria 2205
173 Ga0501082_0318213 3300060353 Bacteria 1355

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049576 Ga0501040_0045275 Ga0501040_0045275_11_1012 320
2 3300046501 Ga0495607_0026471 Ga0495607_0026471_21_1055 331
3 3300039437 Ga0436365_0042396 Ga0436365_0042396_289_1386 351
4 3300046689 Ga0495613_0156239 Ga0495613_0156239_12_1136 352
5 3300050513 nmdc:mga0rr50_149931_c1 nmdc:mga0rr50_149931_c1_294_1394 352
6 3300039450 Ga0436363_0057987 Ga0436363_0057987_5639_6829 356
7 3300031251 Ga0265327_10001294 Ga0265327_100012949 362
8 3300049589 Ga0501073_0068913 Ga0501073_0068913_995_2182 362
9 iso_pu_bacteria 2602042107 2603858909 366
10 3300028794 Ga0307515_10000274 Ga0307515_1000027450 368
11 3300031456 Ga0307513_10020747 Ga0307513_100207476 368
12 iso_pu_bacteria 2837651117 2837653770 368
13 iso_pu_bacteria 2919073203 2919075385 368
14 3300006038 Ga0075365_10009708 Ga0075365_100097085 370
15 3300006186 Ga0075369_10025875 Ga0075369_100258753 370
16 3300025295 Ga0209564_1019129 Ga0209564_10191292 370
17 3300048919 Ga0496116_0005560 Ga0496116_0005560_2257_3411 370
18 3300048920 Ga0496117_0119693 Ga0496117_0119693_126_1280 370
19 3300048926 Ga0496123_0120272 Ga0496123_0120272_85_1239 370
20 3300048928 Ga0496125_0009504 Ga0496125_0009504_3750_4904 370
21 3300050492 nmdc:mga0yw44_93415_c1 nmdc:mga0yw44_93415_c1_347_1501 370
22 3300050516 nmdc:mga0sz30_36649_c1 nmdc:mga0sz30_36649_c1_886_2040 370
23 3300053098 Ga0500650_0002212 Ga0500650_0002212_3402_4556 370
24 3300053104 Ga0500556_0000002 Ga0500556_0000002_608736_609890 370
25 3300053139 Ga0500568_0001420 Ga0500568_0001420_9084_10238 370
26 3300053151 Ga0500604_0002043 Ga0500604_0002043_3250_4404 370
27 3300053156 Ga0500622_0002250 Ga0500622_0002250_5203_6357 370
28 3300053727 Ga0500611_002539 Ga0500611_002539_747_1901 370
29 iso_pu_bacteria 3003930520 3003933500 370
30 iso_pu_bacteria 8018150411 8018155631 370
31 3300049822 Ga0501035_0186640 Ga0501035_0186640_210_1367 371
32 3300037466 Ga0395898_0158412 Ga0395898_0158412_897_2057 372
33 3300046460 Ga0495638_0009550 Ga0495638_0009550_3991_5151 372
34 3300046515 Ga0495620_0053080 Ga0495620_0053080_294_1454 372
35 3300046520 Ga0495637_0020714 Ga0495637_0020714_1381_2541 372
36 3300046665 Ga0495661_0024219 Ga0495661_0024219_1762_2922 372
37 3300048920 Ga0496117_0081127 Ga0496117_0081127_473_1633 372
38 3300048926 Ga0496123_0009762 Ga0496123_0009762_4232_5392 372
39 3300053088 Ga0500644_0003112 Ga0500644_0003112_1301_2461 372
40 3300053130 Ga0500642_0000115 Ga0500642_0000115_11532_12692 372
41 3300053134 Ga0500658_0034849 Ga0500658_0034849_302_1462 372
42 3300047319 Ga0495674_0146040 Ga0495674_0146040_392_1582 373
43 3300048924 Ga0496121_0068179 Ga0496121_0068179_1411_2574 373
44 iso_pu_bacteria 2728368998 2728750414 373
45 3300048918 Ga0496115_0065343 Ga0496115_0065343_1340_2530 374
46 3300049570 Ga0501033_0042985 Ga0501033_0042985_117_1283 374
47 3300050493 nmdc:mga0k408_4280_c1 nmdc:mga0k408_4280_c1_3274_4440 374
48 iso_pu_bacteria 2513237096 2513656753 374
49 iso_pu_bacteria 2513237137 2513857939 374
50 iso_pu_bacteria 2513237145 2513917938 374
51 iso_pu_bacteria 2517572143 2517893019 374
52 iso_pu_bacteria 2524023228 2524536869 374
53 iso_pu_bacteria 2667528175 2671117640 374
54 iso_pu_bacteria 2791355197 2793070145 374
55 iso_pu_bacteria 2885374607 2885376238 374
56 iso_pu_bacteria 2903748898 2903751941 374
57 iso_pu_bacteria 2904690495 2904696297 374
58 iso_pu_bacteria 2904699407 2904702643 374
59 iso_pu_bacteria 2906610324 2906617978 374
60 iso_pu_bacteria 2906635258 2906642716 374
61 iso_pu_bacteria 2906660503 2906661471 374
62 iso_pu_bacteria 2908739725 2908743409 374
63 iso_pu_bacteria 2908756301 2908760916 374
64 iso_pu_bacteria 2922425934 2922429487 374
65 iso_pu_bacteria 2935630451 2935633648 374
66 iso_pu_bacteria 2941507105 2941510539 374
67 iso_pu_bacteria 2941515067 2941517722 374
68 iso_pu_bacteria 2941523033 2941525739 374
69 iso_pu_bacteria 8006933436 8006941477 374
70 iso_pu_bacteria 8006973647 8006981189 374
71 iso_pu_bacteria 8019555841 8019557380 374
72 iso_pu_bacteria 8019565922 8019567920 374
73 iso_pu_bacteria 8056689827 8056690115 374
74 3300049573 Ga0501037_0095473 Ga0501037_0095473_566_1738 375
75 3300049822 Ga0501035_0014013 Ga0501035_0014013_1395_2567 375
76 3300049823 Ga0501044_0140060 Ga0501044_0140060_612_1781 375
77 3300025261 Ga0209233_1000756 Ga0209233_10007566 376
78 3300046462 Ga0495651_0098712 Ga0495651_0098712_705_1880 376
79 3300046559 Ga0495667_0094802 Ga0495667_0094802_710_1885 376
80 3300049569 Ga0501032_0084228 Ga0501032_0084228_18_1193 376
81 3300049572 Ga0501036_0180047 Ga0501036_0180047_215_1390 376
82 3300049574 Ga0501038_0005762 Ga0501038_0005762_4407_5582 376
83 3300049574 Ga0501038_0075418 Ga0501038_0075418_1505_2680 376
84 3300049575 Ga0501039_0067390 Ga0501039_0067390_929_2104 376
85 3300049575 Ga0501039_0146487 Ga0501039_0146487_317_1492 376
86 3300049579 Ga0501043_0007897 Ga0501043_0007897_848_2023 376
87 3300049580 Ga0501046_0031396 Ga0501046_0031396_317_1492 376
88 3300049580 Ga0501046_0076142 Ga0501046_0076142_757_1932 376
89 3300049581 Ga0501047_0308717 Ga0501047_0308717_217_1389 376
90 3300049583 Ga0501067_0064116 Ga0501067_0064116_634_1809 376
91 3300049823 Ga0501044_0037553 Ga0501044_0037553_1428_2603 376
92 3300049824 Ga0501045_0112647 Ga0501045_0112647_605_1780 376
93 3300060353 Ga0501082_0318213 Ga0501082_0318213_72_1247 376
94 iso_pu_bacteria 3005474847 3005479642 376
95 3300014968 Ga0157379_10150316 Ga0157379_101503163 377
96 3300025297 Ga0209758_1012279 Ga0209758_10122796 377
97 3300048928 Ga0496125_0000210 Ga0496125_0000210_13913_15100 377
98 3300049568 Ga0501031_0099892 Ga0501031_0099892_492_1673 377
99 3300049581 Ga0501047_0038459 Ga0501047_0038459_2939_4117 377
100 3300049581 Ga0501047_0259300 Ga0501047_0259300_244_1425 377
101 3300049586 Ga0501070_0037100 Ga0501070_0037100_1972_3153 377
102 3300049742 Ga0501080_0032771 Ga0501080_0032771_426_1604 377
103 3300006942 Ga0099824_1010065 Ga0099824_10100653 378
104 3300006943 Ga0099822_1001268 Ga0099822_100126823 378
105 3300027357 Ga0209589_1000003 Ga0209589_100000365 378
106 3300027361 Ga0209489_100003 Ga0209489_100003116 378
107 3300027363 Ga0209700_100003 Ga0209700_100003116 378
108 3300033442 Ga0315911_1000001 Ga0315911_1000001993 378
109 3300044694 Ga0466963_0127252 Ga0466963_0127252_384_1568 378
110 3300047469 Ga0495673_0042018 Ga0495673_0042018_24_1217 378
111 iso_pu_bacteria 2922386360 2922392461 378
112 iso_pu_bacteria 8056673599 8056674446 378
113 3300006028 Ga0070717_10202662 Ga0070717_102026622 379
114 3300006175 Ga0070712_100085999 Ga0070712_1000859992 379
115 3300009177 Ga0105248_10276841 Ga0105248_102768413 379
116 3300013297 Ga0157378_10024738 Ga0157378_100247384 379
117 3300014325 Ga0163163_10385444 Ga0163163_103854442 379
118 3300025915 Ga0207693_10073668 Ga0207693_100736682 379
119 3300025941 Ga0207711_10065861 Ga0207711_100658612 379
120 3300028379 Ga0268266_10135387 Ga0268266_101353872 379
121 3300031616 Ga0307508_10058266 Ga0307508_100582663 379
122 3300033180 Ga0307510_10098264 Ga0307510_100982643 379
123 3300035724 Ga0373933_0000117 Ga0373933_0000117_13519_14703 379
124 3300038443 Ga0395901_0069281 Ga0395901_0069281_1538_2725 379
125 3300039437 Ga0436365_0042256 Ga0436365_0042256_11_1198 379
126 3300048924 Ga0496121_0058297 Ga0496121_0058297_401_1588 379
127 3300048925 Ga0496122_0068971 Ga0496122_0068971_997_2181 379
128 3300048929 Ga0496126_0001585 Ga0496126_0001585_12439_13623 379
129 3300053093 Ga0500651_0001286 Ga0500651_0001286_1713_2900 379
130 3300053119 Ga0500595_006759 Ga0500595_006759_654_1835 379
131 3300053119 Ga0500595_012101 Ga0500595_012101_1143_2330 379
132 3300053130 Ga0500642_0033486 Ga0500642_0033486_901_2088 379
133 iso_pu_bacteria 2513237141 2513892772 379
134 iso_pu_bacteria 2889033259 2889040503 379
135 3300003659 JGI25404J52841_10002466 JGI25404J52841_100024661 380
136 3300005437 Ga0070710_10097876 Ga0070710_100978762 380
137 3300005983 Ga0081540_1001438 Ga0081540_10014384 380
138 3300005985 Ga0081539_10025598 Ga0081539_100255983 380
139 3300010159 Ga0099796_10007698 Ga0099796_100076982 380
140 3300010375 Ga0105239_10212954 Ga0105239_102129542 380
141 3300021388 Ga0213875_10006614 Ga0213875_100066144 380
142 3300025986 Ga0207658_10118021 Ga0207658_101180211 380
143 3300028379 Ga0268266_10020602 Ga0268266_100206024 380
144 3300037853 Ga0436364_0949651 Ga0436364_0949651_1381_2568 380
145 3300046455 Ga0495603_0008770 Ga0495603_0008770_417_1610 380
146 3300046455 Ga0495603_0026898 Ga0495603_0026898_110_1300 380
147 3300046684 Ga0495669_0042095 Ga0495669_0042095_618_1811 380
148 iso_pu_bacteria 2508501128 2509147371 380
149 3300001990 JGI24737J22298_10017303 JGI24737J22298_100173031 381
150 3300005327 Ga0070658_10199455 Ga0070658_101994552 381
151 3300005563 Ga0068855_100022351 Ga0068855_1000223516 381
152 3300005577 Ga0068857_100004681 Ga0068857_1000046814 381
153 3300005578 Ga0068854_100039846 Ga0068854_1000398462 381
154 3300005614 Ga0068856_100008628 Ga0068856_1000086286 381
155 3300005616 Ga0068852_100387386 Ga0068852_1003873862 381
156 3300005937 Ga0081455_10005182 Ga0081455_100051823 381
157 3300005937 Ga0081455_10017568 Ga0081455_100175682 381
158 3300005937 Ga0081455_10042196 Ga0081455_100421963 381
159 3300005983 Ga0081540_1009251 Ga0081540_10092514 381
160 3300005983 Ga0081540_1037844 Ga0081540_10378442 381
161 3300005983 Ga0081540_1038737 Ga0081540_10387372 381
162 3300005985 Ga0081539_10000250 Ga0081539_1000025021 381
163 3300005985 Ga0081539_10000269 Ga0081539_10000269114 381
164 3300006028 Ga0070717_10002902 Ga0070717_1000290211 381
165 3300006028 Ga0070717_10023716 Ga0070717_100237165 381
166 3300009093 Ga0105240_10099849 Ga0105240_100998493 381
167 3300009093 Ga0105240_10101635 Ga0105240_101016352 381
168 3300009093 Ga0105240_10115096 Ga0105240_101150961 381
169 3300009545 Ga0105237_10249566 Ga0105237_102495662 381
170 3300009551 Ga0105238_10016576 Ga0105238_100165765 381
171 3300010375 Ga0105239_10043258 Ga0105239_100432582 381
172 3300013105 Ga0157369_10028352 Ga0157369_100283525 381
173 3300013105 Ga0157369_10092407 Ga0157369_100924073 381
174 3300013307 Ga0157372_10039622 Ga0157372_100396224 381
175 3300021384 Ga0213876_10038683 Ga0213876_100386833 381
176 3300021441 Ga0213871_10002371 Ga0213871_100023712 381
177 3300025904 Ga0207647_10003086 Ga0207647_100030865 381
178 3300025913 Ga0207695_10036733 Ga0207695_100367334 381
179 3300025913 Ga0207695_10042862 Ga0207695_100428623 381
180 3300025913 Ga0207695_10240392 Ga0207695_102403922 381
181 3300025924 Ga0207694_10022527 Ga0207694_100225274 381
182 3300025924 Ga0207694_10047055 Ga0207694_100470553 381
183 3300025928 Ga0207700_10004013 Ga0207700_100040133 381
184 3300025928 Ga0207700_10036380 Ga0207700_100363804 381
185 3300025949 Ga0207667_10017767 Ga0207667_100177674 381
186 3300026078 Ga0207702_10052680 Ga0207702_100526804 381
187 3300026078 Ga0207702_10187385 Ga0207702_101873852 381
188 3300026116 Ga0207674_10003345 Ga0207674_100033457 381
189 3300031249 Ga0265339_10004105 Ga0265339_100041053 381
190 3300039437 Ga0436365_0494653 Ga0436365_0494653_118_1308 381
191 3300039438 Ga0436360_0877138 Ga0436360_0877138_1165_2355 381
192 3300039450 Ga0436363_0500685 Ga0436363_0500685_2329_3525 381
193 3300046533 Ga0495640_0015362 Ga0495640_0015362_662_1855 381
194 3300046616 Ga0495668_0026054 Ga0495668_0026054_671_1864 381
195 3300048088 Ga0495602_0176908 Ga0495602_0176908_139_1329 381
196 3300048924 Ga0496121_0020136 Ga0496121_0020136_4857_6050 381
197 3300048929 Ga0496126_0034227 Ga0496126_0034227_2976_4166 381
198 3300049569 Ga0501032_0010639 Ga0501032_0010639_3655_4845 381
199 3300049570 Ga0501033_0002256 Ga0501033_0002256_7504_8694 381
200 3300049570 Ga0501033_0031631 Ga0501033_0031631_825_2015 381
201 3300049573 Ga0501037_0000476 Ga0501037_0000476_21069_22259 381
202 3300049574 Ga0501038_0074164 Ga0501038_0074164_1519_2709 381
203 3300049575 Ga0501039_0021161 Ga0501039_0021161_2921_4111 381
204 3300049578 Ga0501042_0013758 Ga0501042_0013758_3601_4791 381
205 3300049579 Ga0501043_0042748 Ga0501043_0042748_2319_3509 381
206 3300049580 Ga0501046_0007928 Ga0501046_0007928_5597_6787 381
207 3300049585 Ga0501069_0089440 Ga0501069_0089440_173_1363 381
208 3300049586 Ga0501070_0232818 Ga0501070_0232818_73_1263 381
209 3300049822 Ga0501035_0245773 Ga0501035_0245773_218_1408 381
210 3300049823 Ga0501044_0025985 Ga0501044_0025985_2721_3911 381
211 3300049823 Ga0501044_0199541 Ga0501044_0199541_625_1815 381

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02684

LpxB

Lipid-A-disaccharide synthetase

24

391

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
8cvz-assembly1.cif.gz_J human glycogenin-1 and glycogen synthase-1 complex in the apo ordered state 0.7615 6 46
3u2w-assembly1.cif.gz_A crystal structure of human glycogenin-1 (gyg1) complexed with manganese and glucose or a glucal species 0.7475 8 48
6rg9-assembly1.cif.gz_A crystal structure of nad kinase 1 from listeria monocytogenes in complexe with an inhibitor 0.7368 11 127
3qvb-assembly1.cif.gz_A-2 crystal structure of human glycogenin-1 (gyg1) complexed with manganese and udp 0.7341 6 48
2i29-assembly1.cif.gz_A crystal structure of nad kinase 1 from listeria monocytogenes 0.6987 11 126
ID Description Score Start End Superfamily
af_F4IF99_42_436_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8722 13 359 3.40.50.2000
af_F4IF99_42_436_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.7966 13 359 3.40.50.2000
af_P10441_9_377_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.7731 13 369 3.40.50.2000
af_P10441_9_377_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.7493 13 369 3.40.50.2000
1rnlA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.7386 9 125 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A4Y8NWD2-F1-model_v4 deleted 0.9567 11 171
AF-A0A0B8Q7Y7-F1-model_v4 Lipid-A-disaccharide synthase (EC 2.4.1.182) 0.9542 9 99 GO:0005543
GO:0008915
GO:0009245
GO:0016020
AF-A0A355UGS8-F1-model_v4 Lipid-A-disaccharide synthase (EC 2.4.1.182) 0.9481 11 164 GO:0005543
GO:0008915
GO:0009245
GO:0016020
AF-A0A7Y7DR98-F1-model_v4 deleted 0.9455 11 141
AF-A0A4Y8NWD2-F1-model_v4 deleted 0.9453 11 171

Feature Viewer

pLDDT pTM Quality
81.34 0.81 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map