F321320

General Info

Members Datasets Scaffolds Average Seq Length
211 159 422 139

Family's Representative Sequence

Representative Sequence 3300005439|Ga0070711_101379003|Ga0070711_1013790031
Length 160
Sequence MAFVPPARHLLRAKDLADARYAEPLGVDDLARAAGLSRAHFSREFRRAFGEPPHAYLLTRRLERAAALLRGTDRSVSDICFAVGLRSVGSFTTSFTRTYGLSPTAYRDAFPPAAAYALVPACVVRAYGRPATRHVSRRHPDEAGLPSPPTERERQEETER

Samples

Sample ID Description Type Environment
1 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
2 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
5 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
6 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
7 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
15 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
16 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
17 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
18 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
19 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
20 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
21 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
22 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
23 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
28 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
29 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
31 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
32 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
33 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
34 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
35 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
36 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
37 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
38 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
39 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
40 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
41 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
56 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
57 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
58 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
59 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
60 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
61 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
62 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
63 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
64 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
65 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
66 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
67 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
68 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
69 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
70 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
71 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
72 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
73 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
74 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
75 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
76 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
77 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
78 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
79 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
80 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
81 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
82 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
83 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
84 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
85 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
86 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
87 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
88 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
89 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
90 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
91 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
92 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
93 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
94 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
95 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
96 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
97 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
98 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
99 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
100 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
101 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
102 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
103 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
104 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
105 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
106 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
107 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
108 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
109 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
110 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
111 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
112 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
113 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
114 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
115 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
116 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
117 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
118 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
119 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
120 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
121 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
122 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
123 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
124 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
125 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
126 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
127 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
128 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
129 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
135 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
136 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
137 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
138 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
139 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
140 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
141 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
142 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
143 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
144 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
145 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
146 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
147 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
148 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
149 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
150 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
151 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
152 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
153 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
154 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
155 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
156 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
157 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
158 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
159 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.95
Nodule 0
Rhizoplane 13.74
Rhizosphere 82.46
Stem 0
Stem Tuber 0
Unclassified 3.32

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070711_101379003 3300005439 Bacteria 613
2 JGI25404J52841_10002654 3300003659 Bacteria 3415
3 Ga0070683_100286269 3300005329 Bacteria 1568
4 Ga0070683_100342326 3300005329 Bacteria 1424
5 Ga0070683_100350669 3300005329 Bacteria 1405
6 Ga0070692_10028474 3300005345 Bacteria 2776
7 Ga0070659_100103739 3300005366 Bacteria 2291
8 Ga0070667_100684895 3300005367 Bacteria 948
9 Ga0070709_10095058 3300005434 Bacteria 1973
10 Ga0070714_101949018 3300005435 Bacteria 573
11 Ga0070701_10380600 3300005438 Bacteria 889
12 Ga0070711_100053443 3300005439 Bacteria 2784
13 Ga0070706_100451762 3300005467 Bacteria 1196
14 Ga0070707_100211777 3300005468 Bacteria 1889
15 Ga0070679_100627579 3300005530 Bacteria 1018
16 Ga0070684_100118280 3300005535 Bacteria 2382
17 Ga0070684_100916050 3300005535 Bacteria 821
18 Ga0070704_100624548 3300005549 Bacteria 949
19 Ga0070664_100139597 3300005564 Bacteria 2133
20 Ga0068854_100751209 3300005578 Bacteria 846
21 Ga0068854_101001750 3300005578 Bacteria 740
22 Ga0068854_101299614 3300005578 Unclassified 655
23 Ga0068866_10147128 3300005718 Bacteria 1360
24 Ga0068862_101021390 3300005844 Bacteria 819
25 Ga0081538_10100156 3300005981 Bacteria 1462
26 Ga0081540_1000063 3300005983 Bacteria 119510
27 Ga0081539_10004992 3300005985 Bacteria 14028
28 Ga0070716_100063454 3300006173 Bacteria 2145
29 Ga0068871_100095998 3300006358 Bacteria 2476
30 Ga0075428_100132656 3300006844 Bacteria 2709
31 Ga0075430_101044199 3300006846 Bacteria 673
32 Ga0075431_100233151 3300006847 Bacteria 1875
33 Ga0075433_10646676 3300006852 Bacteria 927
34 Ga0105245_10138126 3300009098 Bacteria 2293
35 Ga0105245_10282816 3300009098 Bacteria 1622
36 Ga0105245_10535214 3300009098 Bacteria 1192
37 Ga0114129_10001814 3300009147 Bacteria 29120
38 Ga0105243_10009871 3300009148 Bacteria 7261
39 Ga0105243_11941489 3300009148 Bacteria 622
40 Ga0105242_10922391 3300009176 Bacteria 875
41 Ga0105249_10072249 3300009553 Bacteria 3189
42 Ga0105249_11858063 3300009553 Bacteria 675
43 Ga0105239_10113594 3300010375 Bacteria 3003
44 Ga0163162_10122518 3300013306 Bacteria 2705
45 Ga0163162_10191976 3300013306 Bacteria 2170
46 Ga0163162_10266223 3300013306 Bacteria 1845
47 Ga0163162_10408982 3300013306 Bacteria 1490
48 Ga0163162_11206372 3300013306 Bacteria 859
49 Ga0157375_10085546 3300013308 Bacteria 3203
50 Ga0157375_10778837 3300013308 Bacteria 1106
51 Ga0157375_11894076 3300013308 Bacteria 708
52 Ga0163163_10242333 3300014325 Bacteria 1853
53 Ga0157380_10000929 3300014326 Bacteria 18482
54 Ga0182008_10532521 3300014497 Bacteria 650
55 Ga0157376_10197949 3300014969 Bacteria 1847
56 Ga0163161_10000027 3300017792 Bacteria 197774
57 Ga0207699_10057507 3300025906 Bacteria 2322
58 Ga0207699_10079106 3300025906 Bacteria 2033
59 Ga0207699_10483152 3300025906 Bacteria 892
60 Ga0207645_10075499 3300025907 Bacteria 2157
61 Ga0207693_10143864 3300025915 Bacteria 1875
62 Ga0207663_10361095 3300025916 Bacteria 1102
63 Ga0207663_10433006 3300025916 Bacteria 1011
64 Ga0207660_11361578 3300025917 Bacteria 576
65 Ga0207681_10877909 3300025923 Bacteria 751
66 Ga0207687_10064043 3300025927 Bacteria 2605
67 Ga0207669_10025974 3300025937 Bacteria 3177
68 Ga0207665_10103510 3300025939 Bacteria 1991
69 Ga0207661_10306287 3300025944 Bacteria 1425
70 Ga0207658_10870924 3300025986 Bacteria 819
71 Ga0207703_11416137 3300026035 Bacteria 669
72 Ga0207648_10020601 3300026089 Bacteria 5936
73 Ga0207675_100036142 3300026118 Bacteria 4607
74 Ga0265326_10074543 3300028558 Bacteria 959
75 Ga0265336_10021276 3300028666 Bacteria 2075
76 Ga0265327_10006439 3300031251 Bacteria 9385
77 Ga0307408_100066365 3300031548 Bacteria 2650
78 Ga0307409_100697477 3300031995 Bacteria 1014
79 Ga0307416_100820246 3300032002 Unclassified 1027
80 Ga0373943_0119719 3300035170 Bacteria 1398
81 Ga0373946_0395530 3300035171 Bacteria 697
82 Ga0395898_0221702 3300037466 Bacteria 1804
83 Ga0395898_0396966 3300037466 Bacteria 1315
84 Ga0395905_0152506 3300037471 Bacteria 2174
85 Ga0395901_0665936 3300038443 Bacteria 1042
86 Ga0439448_0041737 3300042005 Bacteria 1485
87 Ga0439463_158098 3300042016 Bacteria 588
88 Ga0466966_0144633 3300044684 Bacteria 1452
89 Ga0466960_0676593 3300044901 Bacteria 617
90 Ga0466959_0257169 3300045049 Bacteria 1203
91 Ga0451576_1222096 3300045051 Bacteria 784
92 Ga0466967_0059558 3300045976 Bacteria 3381
93 Ga0466967_0232409 3300045976 Bacteria 1756
94 Ga0466967_1084934 3300045976 Bacteria 798
95 Ga0495592_0001391 3300046454 Bacteria 16753
96 Ga0495603_0282575 3300046455 Bacteria 954
97 Ga0495591_030487 3300046458 Bacteria 1628
98 Ga0495641_0490280 3300046461 Bacteria 560
99 Ga0495653_0162840 3300046463 Bacteria 1547
100 Ga0495605_0063164 3300046474 Bacteria 1767
101 Ga0495607_0094239 3300046501 Bacteria 1615
102 Ga0495608_0009636 3300046511 Bacteria 6738
103 Ga0495618_0000144 3300046514 Bacteria 50904
104 Ga0495628_0004295 3300046516 Bacteria 12674
105 Ga0495628_0611206 3300046516 Bacteria 778
106 Ga0495630_0000438 3300046517 Bacteria 31748
107 Ga0495630_0220018 3300046517 Bacteria 1450
108 Ga0495630_0739577 3300046517 Bacteria 752
109 Ga0495637_0073027 3300046520 Bacteria 1381
110 Ga0495644_0172213 3300046523 Unclassified 831
111 Ga0495642_0065903 3300046528 Bacteria 1508
112 Ga0495654_0161386 3300046530 Bacteria 984
113 Ga0495609_0246961 3300046538 Bacteria 735
114 Ga0495633_0079394 3300046558 Bacteria 1528
115 Ga0495656_0127112 3300046615 Bacteria 1209
116 Ga0495656_0247018 3300046615 Bacteria 900
117 Ga0495668_0653106 3300046616 Unclassified 581
118 Ga0495634_0021330 3300046642 Bacteria 4581
119 Ga0495634_0041562 3300046642 Bacteria 3122
120 Ga0495611_0158208 3300046648 Bacteria 1058
121 Ga0495661_0332063 3300046665 Bacteria 753
122 Ga0495623_0082717 3300046679 Bacteria 1984
123 Ga0495623_0463897 3300046679 Bacteria 673
124 Ga0495658_0290033 3300046683 Bacteria 1034
125 Ga0495669_0097920 3300046684 Bacteria 1360
126 Ga0495669_0279882 3300046684 Bacteria 802
127 Ga0495613_0689880 3300046689 Bacteria 673
128 Ga0495670_0092788 3300046691 Bacteria 1547
129 Ga0495671_0024524 3300046692 Bacteria 3141
130 Ga0495589_0204372 3300046794 Bacteria 931
131 Ga0495589_0277548 3300046794 Bacteria 780
132 Ga0495600_0015081 3300046809 Bacteria 4880
133 Ga0495660_0191534 3300046810 Bacteria 982
134 Ga0495636_0094352 3300047318 Bacteria 1302
135 Ga0495680_0323396 3300047322 Bacteria 1079
136 Ga0495683_0067767 3300047323 Bacteria 1757
137 Ga0495685_018821 3300047447 Bacteria 2371
138 Ga0495686_0232323 3300047472 Bacteria 1044
139 Ga0496101_0070824 3300048904 Bacteria 2554
140 Ga0496101_0121070 3300048904 Bacteria 1978
141 Ga0496101_0147553 3300048904 Bacteria 1797
142 Ga0496102_0022871 3300048905 Bacteria 5543
143 Ga0496102_0076714 3300048905 Bacteria 3075
144 Ga0496102_0816983 3300048905 Bacteria 854
145 Ga0496103_0042818 3300048906 Bacteria 2787
146 Ga0496103_0199398 3300048906 Bacteria 1287
147 Ga0496104_0024269 3300048907 Bacteria 5577
148 Ga0496104_0500354 3300048907 Bacteria 1126
149 Ga0496105_0028675 3300048908 Bacteria 4553
150 Ga0496105_0047945 3300048908 Bacteria 3526
151 Ga0496105_0271931 3300048908 Bacteria 1368
152 Ga0496106_0177284 3300048909 Bacteria 1691
153 Ga0496107_0057846 3300048910 Bacteria 2803
154 Ga0496107_0088769 3300048910 Bacteria 2257
155 Ga0496108_0438299 3300048911 Bacteria 1141
156 Ga0496109_0507906 3300048912 Bacteria 1138
157 Ga0496109_0782677 3300048912 Bacteria 892
158 Ga0496110_0738600 3300048913 Bacteria 887
159 Ga0496111_0291718 3300048914 Bacteria 1210
160 Ga0496112_0001101 3300048915 Bacteria 20019
161 Ga0496112_0338550 3300048915 Bacteria 1448
162 Ga0496113_0034545 3300048916 Bacteria 3689
163 Ga0496113_1401037 3300048916 Bacteria 541
164 Ga0496114_0028669 3300048917 Bacteria 4569
165 Ga0496114_0449534 3300048917 Bacteria 1141
166 Ga0496114_1198781 3300048917 Bacteria 645
167 Ga0496115_0015103 3300048918 Bacteria 5851
168 Ga0496117_0008588 3300048920 Bacteria 9681
169 Ga0496118_0000128 3300048921 Bacteria 134661
170 Ga0496119_0050775 3300048922 Bacteria 2553
171 Ga0496121_0139734 3300048924 Bacteria 1799
172 Ga0496121_0181210 3300048924 Bacteria 1520
173 Ga0496125_0123547 3300048928 Bacteria 1840
174 Ga0501040_0722601 3300049576 Bacteria 720
175 Ga0501041_0227731 3300049577 Bacteria 1170
176 Ga0501042_0267183 3300049578 Bacteria 1235
177 Ga0501042_0370172 3300049578 Bacteria 1037
178 Ga0501046_0675939 3300049580 Bacteria 729
179 Ga0501048_0292686 3300049582 Unclassified 1158
180 Ga0501068_0264304 3300049584 Bacteria 1098
181 Ga0501070_0016206 3300049586 Bacteria 6262
182 Ga0501071_0316596 3300049587 Bacteria 1184
183 Ga0501072_0490412 3300049588 Bacteria 972
184 Ga0501072_0909997 3300049588 Bacteria 687
185 Ga0501074_0206861 3300049590 Bacteria 1398
186 Ga0501074_0517028 3300049590 Bacteria 846
187 Ga0501075_0216545 3300049591 Unclassified 1461
188 Ga0501077_0069916 3300049593 Bacteria 2225
189 Ga0501079_1285472 3300049741 Unclassified 576
190 Ga0501081_0456547 3300049743 Bacteria 950
191 Ga0501045_0054294 3300049824 Bacteria 2929
192 nmdc:mga05p37_13902_c1 3300050507 Bacteria 9647
193 nmdc:mga05p37_873678_c1 3300050507 Bacteria 973
194 nmdc:mga0qj67_959930_c1 3300050509 Bacteria 672
195 nmdc:mga06r32_536510_c1 3300050510 Bacteria 1145
196 nmdc:mga0n895_389188_c1 3300050512 Bacteria 1410
197 nmdc:mga0a205_626820_c1 3300050515 Bacteria 927
198 Ga0495601_0217920 3300053077 Bacteria 1246
199 Ga0495612_0024388 3300053078 Bacteria 2428
200 Ga0495595_0000342 3300053084 Bacteria 17839
201 Ga0495595_0090500 3300053084 Bacteria 1468
202 Ga0495595_0201942 3300053084 Bacteria 990
203 Ga0495619_0000923 3300053085 Bacteria 19310
204 Ga0500572_061394 3300053111 Bacteria 1143
205 Ga0500595_029347 3300053119 Bacteria 1867
206 Ga0501084_0101043 3300054114 Bacteria 2422
207 Ga0501084_1845432 3300054114 Bacteria 505
208 Ga0590071_006785 3300059421 Bacteria 2716
209 Ga0590075_015575 3300059424 Bacteria 1866
210 Ga0501082_0386863 3300060353 Bacteria 1221
211 Ga0530510_0681809 3300061734 Bacteria 783
212 Ga0070711_101379003
213 JGI25404J52841_10002654
214 Ga0070683_100286269
215 Ga0070683_100342326
216 Ga0070683_100350669
217 Ga0070692_10028474
218 Ga0070659_100103739
219 Ga0070667_100684895
220 Ga0070709_10095058
221 Ga0070714_101949018
222 Ga0070701_10380600
223 Ga0070711_100053443
224 Ga0070706_100451762
225 Ga0070707_100211777
226 Ga0070679_100627579
227 Ga0070684_100118280
228 Ga0070684_100916050
229 Ga0070704_100624548
230 Ga0070664_100139597
231 Ga0068854_100751209
232 Ga0068854_101001750
233 Ga0068854_101299614
234 Ga0068866_10147128
235 Ga0068862_101021390
236 Ga0081538_10100156
237 Ga0081540_1000063
238 Ga0081539_10004992
239 Ga0070716_100063454
240 Ga0068871_100095998
241 Ga0075428_100132656
242 Ga0075430_101044199
243 Ga0075431_100233151
244 Ga0075433_10646676
245 Ga0105245_10138126
246 Ga0105245_10282816
247 Ga0105245_10535214
248 Ga0114129_10001814
249 Ga0105243_10009871
250 Ga0105243_11941489
251 Ga0105242_10922391
252 Ga0105249_10072249
253 Ga0105249_11858063
254 Ga0105239_10113594
255 Ga0163162_10122518
256 Ga0163162_10191976
257 Ga0163162_10266223
258 Ga0163162_10408982
259 Ga0163162_11206372
260 Ga0157375_10085546
261 Ga0157375_10778837
262 Ga0157375_11894076
263 Ga0163163_10242333
264 Ga0157380_10000929
265 Ga0182008_10532521
266 Ga0157376_10197949
267 Ga0163161_10000027
268 Ga0207699_10057507
269 Ga0207699_10079106
270 Ga0207699_10483152
271 Ga0207645_10075499
272 Ga0207693_10143864
273 Ga0207663_10361095
274 Ga0207663_10433006
275 Ga0207660_11361578
276 Ga0207681_10877909
277 Ga0207687_10064043
278 Ga0207669_10025974
279 Ga0207665_10103510
280 Ga0207661_10306287
281 Ga0207658_10870924
282 Ga0207703_11416137
283 Ga0207648_10020601
284 Ga0207675_100036142
285 Ga0265326_10074543
286 Ga0265336_10021276
287 Ga0265327_10006439
288 Ga0307408_100066365
289 Ga0307409_100697477
290 Ga0307416_100820246
291 Ga0373943_0119719
292 Ga0373946_0395530
293 Ga0395898_0221702
294 Ga0395898_0396966
295 Ga0395905_0152506
296 Ga0395901_0665936
297 Ga0439448_0041737
298 Ga0439463_158098
299 Ga0466966_0144633
300 Ga0466960_0676593
301 Ga0466959_0257169
302 Ga0451576_1222096
303 Ga0466967_0059558
304 Ga0466967_0232409
305 Ga0466967_1084934
306 Ga0495592_0001391
307 Ga0495603_0282575
308 Ga0495591_030487
309 Ga0495641_0490280
310 Ga0495653_0162840
311 Ga0495605_0063164
312 Ga0495607_0094239
313 Ga0495608_0009636
314 Ga0495618_0000144
315 Ga0495628_0004295
316 Ga0495628_0611206
317 Ga0495630_0000438
318 Ga0495630_0220018
319 Ga0495630_0739577
320 Ga0495637_0073027
321 Ga0495644_0172213
322 Ga0495642_0065903
323 Ga0495654_0161386
324 Ga0495609_0246961
325 Ga0495633_0079394
326 Ga0495656_0127112
327 Ga0495656_0247018
328 Ga0495668_0653106
329 Ga0495634_0021330
330 Ga0495634_0041562
331 Ga0495611_0158208
332 Ga0495661_0332063
333 Ga0495623_0082717
334 Ga0495623_0463897
335 Ga0495658_0290033
336 Ga0495669_0097920
337 Ga0495669_0279882
338 Ga0495613_0689880
339 Ga0495670_0092788
340 Ga0495671_0024524
341 Ga0495589_0204372
342 Ga0495589_0277548
343 Ga0495600_0015081
344 Ga0495660_0191534
345 Ga0495636_0094352
346 Ga0495680_0323396
347 Ga0495683_0067767
348 Ga0495685_018821
349 Ga0495686_0232323
350 Ga0496101_0070824
351 Ga0496101_0121070
352 Ga0496101_0147553
353 Ga0496102_0022871
354 Ga0496102_0076714
355 Ga0496102_0816983
356 Ga0496103_0042818
357 Ga0496103_0199398
358 Ga0496104_0024269
359 Ga0496104_0500354
360 Ga0496105_0028675
361 Ga0496105_0047945
362 Ga0496105_0271931
363 Ga0496106_0177284
364 Ga0496107_0057846
365 Ga0496107_0088769
366 Ga0496108_0438299
367 Ga0496109_0507906
368 Ga0496109_0782677
369 Ga0496110_0738600
370 Ga0496111_0291718
371 Ga0496112_0001101
372 Ga0496112_0338550
373 Ga0496113_0034545
374 Ga0496113_1401037
375 Ga0496114_0028669
376 Ga0496114_0449534
377 Ga0496114_1198781
378 Ga0496115_0015103
379 Ga0496117_0008588
380 Ga0496118_0000128
381 Ga0496119_0050775
382 Ga0496121_0139734
383 Ga0496121_0181210
384 Ga0496125_0123547
385 Ga0501040_0722601
386 Ga0501041_0227731
387 Ga0501042_0267183
388 Ga0501042_0370172
389 Ga0501046_0675939
390 Ga0501048_0292686
391 Ga0501068_0264304
392 Ga0501070_0016206
393 Ga0501071_0316596
394 Ga0501072_0490412
395 Ga0501072_0909997
396 Ga0501074_0206861
397 Ga0501074_0517028
398 Ga0501075_0216545
399 Ga0501077_0069916
400 Ga0501079_1285472
401 Ga0501081_0456547
402 Ga0501045_0054294
403 nmdc:mga05p37_13902_c1
404 nmdc:mga05p37_873678_c1
405 nmdc:mga0qj67_959930_c1
406 nmdc:mga06r32_536510_c1
407 nmdc:mga0n895_389188_c1
408 nmdc:mga0a205_626820_c1
409 Ga0495601_0217920
410 Ga0495612_0024388
411 Ga0495595_0000342
412 Ga0495595_0090500
413 Ga0495595_0201942
414 Ga0495619_0000923
415 Ga0500572_061394
416 Ga0500595_029347
417 Ga0501084_0101043
418 Ga0501084_1845432
419 Ga0590071_006785
420 Ga0590075_015575
421 Ga0501082_0386863
422 Ga0530510_0681809

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12833

HTH_18

Helix-turn-helix domain

30

109

0.97

PF00165

HTH_AraC

Bacterial regulatory helix-turn-helix proteins, AraC family

69

108

0.94

PF00165

HTH_AraC

Bacterial regulatory helix-turn-helix proteins, AraC family

18

58

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
6p7t-assembly1.cif.gz_A crystal structure of apo toxt k231a from vibrio cholerae strain sce256 0.8647 9 58
5sux-assembly1.cif.gz_A crystal structure of toxt from vibrio cholerae o395 bound to (e)-4-(8-methylnaphthalen-1-yl)but-3-enoic acid 0.8519 9 60
3lsg-assembly1.cif.gz_A the crystal structure of the c-terminal domain of the two-component response regulator yesn from fusobacterium nucleatum subsp. nucleatum atcc 25586 0.8014 11 87
3oou-assembly1.cif.gz_A the structure of a protein with unkown function from listeria innocua 0.799 10 87
3lsg-assembly2.cif.gz_D the crystal structure of the c-terminal domain of the two-component response regulator yesn from fusobacterium nucleatum subsp. nucleatum atcc 25586 0.7987 11 86
ID Description Score Start End Superfamily
5suwA03 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.8663 6 59 1.10.10.60
af_P0A9E0_176_235_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.8448 9 63 1.10.10.60
af_P17410_155_277_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.8319 5 87 1.10.10.60
1bl0A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.8278 9 60 1.10.10.60
1xs9A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.8162 9 60 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A5M9R065-F1-model_v4 Helix-turn-helix domain-containing protein 0.9373 9 87 GO:0003700
GO:0043565
AF-A0A7X7RLH8-F1-model_v4 Substrate-binding domain-containing protein 0.8804 8 87 GO:0000976
GO:0003700
AF-A0A4Q2M292-F1-model_v4 Helix-turn-helix domain-containing protein 0.8664 3 87 GO:0003700
GO:0030288
GO:0043565
GO:1901678
AF-A0A7C6P8K1-F1-model_v4 Stage 0 sporulation protein A homolog 0.8484 6 88 GO:0000160
GO:0003700
GO:0005737
GO:0043565
AF-A0A424L368-F1-model_v4 AraC family transcriptional regulator 0.8468 6 94 GO:0003700
GO:0043565

Map