F321101

General Info

Members Datasets Scaffolds Average Seq Length
211 141 422 412

Family's Representative Sequence

Representative Sequence 3300003322|rootL2_10085832|rootL2_100858323
Length 494
Sequence MIRSFICIGECIQGPYLSAPGDGIMAKQLRMITRSRLLQLPGRRVIENRRVEKRHRYDRSSIILPDTPAAAGRQLPVKNYHMHDPKHISIADYSYTLPEELIAHYPLAERDASKLLIYEEGKIREDIYRHIVEYLPAGSLLVFNNTKVVEARILFRKPTGGQIELFCLEPPVEYGGIAAAMAQTGKVRWKCLIGGASKWKPGQVLQKTIEIEGASLLLEARYLGKQDDAFLIELSWQPPALSFSALLHQAGLVPLPPYIRRSPETSDTERYQTIYARHDGSVAAPTAGLHFTEEVFASLAAKDIRQTFVTLHVGAGTFLPVKTPTLADHTMHVEWIDVTKDTIRLLLDNLHHPIIPVGTTSARTLESLYWLGVKVIRDPGLSPDDLVVHQWDAYEPAMPEATAATALAALLEWMQRQGFSQIITRTQLLITPGYRWRIAGGLVTNFHQPESTLLLLVASLIGEDWRKVYEYALSHDFRFLSYGDGSLLLGRSHP

Samples

Sample ID Description Type Environment
1 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
4 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
15 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
16 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
20 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
24 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
27 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
29 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
30 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
31 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
32 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
34 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
37 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
38 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
39 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
40 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
41 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
42 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
43 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
44 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
45 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
46 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
47 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
48 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
49 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
50 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
51 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
52 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
75 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
76 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
77 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
78 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
79 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
80 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
81 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
82 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
83 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
84 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
85 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
86 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
87 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
88 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
89 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
90 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
91 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
92 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
93 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
94 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
95 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
96 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
97 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
98 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
99 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
100 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
101 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
102 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
103 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
104 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
105 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
106 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
115 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
116 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
117 3300049703 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control Metagenome Rhizosphere
118 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
119 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
120 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
121 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
123 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
124 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
125 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
126 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
127 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
128 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
129 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
130 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
131 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
132 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
133 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
134 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
135 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
136 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
137 2739367866 Hymenobacter sp. YR204 Isolate Unclassified
138 2884634485 Algoriphagus kandeliae XY-J91 Isolate Unclassified
139 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
140 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere
141 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.63
Metatranscriptomes 0
Isolates 2.37

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.27
Nodule 0
Rhizoplane 0.95
Rhizosphere 87.68
Stem 0
Stem Tuber 0
Unclassified 10.43

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10085832 3300003322 Bacteria 3071
2 rootH2_10029429 3300003320 Bacteria 2803
3 rootH2_10047161 3300003320 Bacteria 19289
4 rootH2_10107793 3300003320 Bacteria 3187
5 rootL2_10299792 3300003322 Bacteria 2710
6 JGI25160J50197_1002527 3300003354 Bacteria 8477
7 Ga0065714_10097845 3300005288 Bacteria 1725
8 Ga0065712_10004092 3300005290 Bacteria 3514
9 Ga0070683_100020600 3300005329 Bacteria 5869
10 Ga0070670_100054251 3300005331 Bacteria 3441
11 Ga0070682_100000008 3300005337 Bacteria 322125
12 Ga0070667_100070668 3300005367 Bacteria 2972
13 Ga0070667_100118650 3300005367 Bacteria 2300
14 Ga0070667_100130680 3300005367 Unclassified 2191
15 Ga0070681_10064633 3300005458 Bacteria 3629
16 Ga0070685_10021441 3300005466 Bacteria 3512
17 Ga0070685_10035035 3300005466 Bacteria 2830
18 Ga0070698_100003032 3300005471 Bacteria 18504
19 Ga0070698_100005207 3300005471 Bacteria 14225
20 Ga0070699_100089010 3300005518 Bacteria 2697
21 Ga0068853_100016818 3300005539 Bacteria 6026
22 Ga0068853_100130966 3300005539 Bacteria 2245
23 Ga0068853_100151024 3300005539 Bacteria 2091
24 Ga0070686_100027505 3300005544 Bacteria 3443
25 Ga0070686_100167248 3300005544 Bacteria 1553
26 Ga0070693_100117566 3300005547 Unclassified 1645
27 Ga0070665_100000018 3300005548 Bacteria 434118
28 Ga0068855_100006057 3300005563 Bacteria 14751
29 Ga0068855_100024991 3300005563 Bacteria 7150
30 Ga0068855_100029895 3300005563 Bacteria 6516
31 Ga0068855_100036476 3300005563 Bacteria 5851
32 Ga0068857_100004875 3300005577 Bacteria 11385
33 Ga0068857_100099929 3300005577 Bacteria 2603
34 Ga0068854_100020426 3300005578 Bacteria 4481
35 Ga0068852_100009116 3300005616 Bacteria 7346
36 Ga0068859_100000333 3300005617 Bacteria 47025
37 Ga0068859_100081545 3300005617 Bacteria 3277
38 Ga0068866_10014576 3300005718 Bacteria 3475
39 Ga0068861_100004602 3300005719 Bacteria 9259
40 Ga0068860_100007095 3300005843 Bacteria 11209
41 Ga0068860_100118322 3300005843 Bacteria 2536
42 Ga0068860_100125657 3300005843 Bacteria 2458
43 Ga0081540_1001649 3300005983 Bacteria 18988
44 Ga0097621_100132524 3300006237 Unclassified 2122
45 Ga0068871_100041682 3300006358 Unclassified 3682
46 Ga0075428_100027768 3300006844 Bacteria 6261
47 Ga0075428_100300317 3300006844 Unclassified 1726
48 Ga0075430_100142475 3300006846 Unclassified 1996
49 Ga0075431_100019709 3300006847 Bacteria 6884
50 Ga0097620_100000333 3300006931 Bacteria 47025
51 Ga0097620_100081546 3300006931 Bacteria 3277
52 Ga0105240_10001675 3300009093 Bacteria 37595
53 Ga0105240_10027432 3300009093 Bacteria 7453
54 Ga0105240_10046078 3300009093 Bacteria 5527
55 Ga0105240_10083907 3300009093 Bacteria 3908
56 Ga0105240_10215654 3300009093 Bacteria 2239
57 Ga0111539_10125522 3300009094 Bacteria 3007
58 Ga0114129_10029458 3300009147 Bacteria 7775
59 Ga0114129_10492317 3300009147 Bacteria 1602
60 Ga0105242_10010467 3300009176 Bacteria 7118
61 Ga0105242_10030570 3300009176 Bacteria 4300
62 Ga0105237_10004003 3300009545 Bacteria 17228
63 Ga0105237_10012157 3300009545 Bacteria 9081
64 Ga0105237_10017955 3300009545 Bacteria 7330
65 Ga0105237_10047144 3300009545 Bacteria 4332
66 Ga0105237_10090549 3300009545 Bacteria 3048
67 Ga0105238_10023097 3300009551 Bacteria 6342
68 Ga0105249_10094174 3300009553 Bacteria 2807
69 Ga0105239_10000155 3300010375 Bacteria 98415
70 Ga0105239_10007798 3300010375 Bacteria 12247
71 Ga0105239_10063308 3300010375 Bacteria 4061
72 Ga0105239_10267015 3300010375 Unclassified 1924
73 Ga0157371_10012230 3300013102 Bacteria 6571
74 Ga0157370_10001018 3300013104 Bacteria 35308
75 Ga0157370_10021167 3300013104 Bacteria 6484
76 Ga0157369_10017224 3300013105 Bacteria 8121
77 Ga0157374_10000025 3300013296 Bacteria 245131
78 Ga0157374_10288821 3300013296 Bacteria 1620
79 Ga0163162_10235047 3300013306 Bacteria 1963
80 Ga0157372_10000294 3300013307 Bacteria 55599
81 Ga0157372_10000582 3300013307 Bacteria 39937
82 Ga0157372_10174407 3300013307 Bacteria 2489
83 Ga0157380_10021416 3300014326 Bacteria 4848
84 Ga0157376_10000892 3300014969 Bacteria 19514
85 Ga0157376_10210321 3300014969 Unclassified 1795
86 Ga0163161_10099007 3300017792 Bacteria 2167
87 Ga0213876_10024372 3300021384 Bacteria 3194
88 Ga0207426_1000189 3300025302 Bacteria 153457
89 Ga0207643_10073133 3300025908 Bacteria 1976
90 Ga0207654_10036598 3300025911 Bacteria 2743
91 Ga0207695_10000282 3300025913 Bacteria 126242
92 Ga0207695_10018837 3300025913 Bacteria 7966
93 Ga0207695_10036953 3300025913 Bacteria 5273
94 Ga0207671_10017710 3300025914 Bacteria 5487
95 Ga0207671_10022721 3300025914 Bacteria 4739
96 Ga0207662_10030936 3300025918 Bacteria 3110
97 Ga0207659_10099501 3300025926 Bacteria 2189
98 Ga0207686_10001130 3300025934 Bacteria 15408
99 Ga0207686_10120484 3300025934 Bacteria 1785
100 Ga0207669_10057518 3300025937 Bacteria 2368
101 Ga0207691_10011222 3300025940 Bacteria 8598
102 Ga0207689_10016182 3300025942 Bacteria 6316
103 Ga0207661_10019793 3300025944 Bacteria 5023
104 Ga0207667_10000403 3300025949 Bacteria 58481
105 Ga0207667_10002943 3300025949 Bacteria 21138
106 Ga0207667_10005819 3300025949 Bacteria 15030
107 Ga0207667_10014501 3300025949 Bacteria 8982
108 Ga0207651_10168903 3300025960 Bacteria 1723
109 Ga0207712_10004165 3300025961 Bacteria 9133
110 Ga0207668_10121570 3300025972 Bacteria 1978
111 Ga0207639_10019475 3300026041 Bacteria 4841
112 Ga0207639_10034462 3300026041 Bacteria 3741
113 Ga0207702_10152007 3300026078 Bacteria 2106
114 Ga0207641_10000549 3300026088 Bacteria 42051
115 Ga0207674_10000600 3300026116 Bacteria 47324
116 Ga0207674_10161894 3300026116 Bacteria 2192
117 Ga0207675_100034811 3300026118 Bacteria 4697
118 Ga0268266_10000026 3300028379 Bacteria 434485
119 Ga0268264_10004574 3300028381 Bacteria 11778
120 Ga0268264_10065694 3300028381 Bacteria 3057
121 Ga0265338_10257544 3300028800 Bacteria 1284
122 Ga0307511_10000228 3300030521 Bacteria 57237
123 Ga0265316_10002314 3300031344 Bacteria 19915
124 Ga0265316_10202417 3300031344 Unclassified 1471
125 Ga0307508_10141015 3300031616 Bacteria 2014
126 Ga0316579_10011880 3300031691 Bacteria 3715
127 Ga0307516_10001571 3300031730 Bacteria 31452
128 Ga0316577_10015544 3300031733 Unclassified 4188
129 Ga0307414_10000028 3300032004 Bacteria 192108
130 Ga0307414_10091244 3300032004 Bacteria 2264
131 Ga0316582_0041400 3300036647 Bacteria 2879
132 Ga0316584_0117200 3300036712 Bacteria 1991
133 Ga0400483_221147 3300039062 Bacteria 45784
134 Ga0400489_70234 3300039093 Bacteria 2643
135 Ga0436365_0329409 3300039437 Bacteria 8810
136 Ga0439433_0018205 3300041999 Unclassified 1562
137 Ga0451577_0064663 3300042876 Bacteria 3262
138 Ga0451577_0074192 3300042876 Unclassified 3035
139 Ga0451577_0120999 3300042876 Bacteria 2345
140 Ga0451577_0205451 3300042876 Unclassified 1778
141 Ga0466969_0000711 3300044656 Bacteria 18002
142 Ga0466972_0000032 3300044658 Bacteria 159445
143 Ga0466972_0000500 3300044658 Bacteria 19594
144 Ga0453683_0000005 3300044673 Bacteria 741657
145 Ga0453683_0000463 3300044673 Bacteria 46589
146 Ga0466966_0073611 3300044684 Bacteria 2136
147 Ga0466961_0078341 3300044693 Bacteria 2093
148 Ga0453684_0004818 3300044712 Bacteria 27744
149 Ga0453684_0008678 3300044712 Bacteria 18078
150 Ga0453684_0012294 3300044712 Bacteria 14165
151 Ga0453684_0018670 3300044712 Bacteria 10627
152 Ga0453684_0033189 3300044712 Bacteria 7201
153 Ga0453684_0056421 3300044712 Bacteria 5095
154 Ga0453684_0071043 3300044712 Bacteria 4404
155 Ga0453684_0095956 3300044712 Unclassified 3644
156 Ga0453684_0123423 3300044712 Bacteria 3122
157 Ga0453684_0266477 3300044712 Bacteria 1960
158 Ga0453684_0479521 3300044712 Unclassified 1380
159 Ga0453684_0516815 3300044712 Bacteria 1320
160 Ga0466959_0000566 3300045049 Bacteria 21533
161 Ga0451576_0002174 3300045051 Bacteria 30334
162 Ga0466958_0098301 3300045836 Bacteria 1817
163 Ga0495638_0097848 3300046460 Bacteria 1759
164 Ga0495648_0001530 3300046524 Bacteria 22622
165 Ga0495668_0001215 3300046616 Bacteria 26081
166 Ga0495625_0120827 3300046660 Bacteria 1783
167 Ga0495672_0013768 3300047320 Bacteria 5565
168 Ga0495672_0044967 3300047320 Bacteria 2646
169 Ga0495686_0004111 3300047472 Bacteria 12115
170 Ga0496114_0000659 3300048917 Bacteria 25568
171 Ga0496115_0005476 3300048918 Bacteria 9237
172 Ga0501032_0113499 3300049569 Unclassified 1792
173 Ga0501034_0001624 3300049571 Bacteria 29165
174 Ga0501036_0000569 3300049572 Bacteria 26504
175 Ga0501037_0138669 3300049573 Unclassified 1741
176 Ga0501038_0074251 3300049574 Unclassified 2877
177 Ga0501039_0046456 3300049575 Unclassified 3354
178 Ga0501043_0043872 3300049579 Unclassified 3515
179 Ga0501047_0003998 3300049581 Bacteria 13855
180 Ga0501047_0025036 3300049581 Bacteria 5733
181 Ga0501067_0009046 3300049583 Bacteria 5516
182 Ga0501073_0004411 3300049589 Bacteria 10575
183 Ga0501073_0008818 3300049589 Bacteria 7459
184 Ga0501074_0007699 3300049590 Bacteria 7801
185 Ga0501219_000067 3300049703 Bacteria 17563
186 Ga0501079_0024284 3300049741 Bacteria 4651
187 Ga0501080_0060780 3300049742 Bacteria 3517
188 Ga0501083_0007944 3300049744 Bacteria 7512
189 Ga0501035_0032180 3300049822 Unclassified 4773
190 Ga0501044_0013350 3300049823 Bacteria 8886
191 Ga0501044_0277859 3300049823 Bacteria 1609
192 Ga0501284_00015 3300050005 Bacteria 104438
193 nmdc:mga05p37_46688_c1 3300050507 Bacteria 5324
194 nmdc:mga09592_188193_c1 3300050508 Bacteria 1787
195 nmdc:mga0qj67_81649_c1 3300050509 Bacteria 2592
196 nmdc:mga08y16_116649_c1 3300050511 Bacteria 2779
197 Ga0500578_0000001 3300053086 Bacteria 317120
198 Ga0500583_0019189 3300053092 Bacteria 2798
199 Ga0500562_000015 3300053108 Bacteria 143120
200 Ga0500642_0026146 3300053130 Bacteria 2379
201 Ga0500622_0000118 3300053156 Bacteria 82672
202 Ga0500622_0013204 3300053156 Bacteria 4459
203 Ga0500645_004617 3300053730 Bacteria 5245
204 Ga0501084_0094231 3300054114 Unclassified 2514
205 Ga0501082_0021123 3300060353 Bacteria 5614
206 Ga0466962_0005230 3300061719 Bacteria 6236
207 2740031173 2739367866 Bacteria 4215900
208 2884636453 2884634485 Bacteria 3928637
209 2910249226 2910245624 Bacteria 6935613
210 2919692700 2919692658 Bacteria 5943958
211 2929160173 2929154850 Bacteria 6753285
212 rootL2_10085832
213 rootH2_10029429
214 rootH2_10047161
215 rootH2_10107793
216 rootL2_10299792
217 JGI25160J50197_1002527
218 Ga0065714_10097845
219 Ga0065712_10004092
220 Ga0070683_100020600
221 Ga0070670_100054251
222 Ga0070682_100000008
223 Ga0070667_100070668
224 Ga0070667_100118650
225 Ga0070667_100130680
226 Ga0070681_10064633
227 Ga0070685_10021441
228 Ga0070685_10035035
229 Ga0070698_100003032
230 Ga0070698_100005207
231 Ga0070699_100089010
232 Ga0068853_100016818
233 Ga0068853_100130966
234 Ga0068853_100151024
235 Ga0070686_100027505
236 Ga0070686_100167248
237 Ga0070693_100117566
238 Ga0070665_100000018
239 Ga0068855_100006057
240 Ga0068855_100024991
241 Ga0068855_100029895
242 Ga0068855_100036476
243 Ga0068857_100004875
244 Ga0068857_100099929
245 Ga0068854_100020426
246 Ga0068852_100009116
247 Ga0068859_100000333
248 Ga0068859_100081545
249 Ga0068866_10014576
250 Ga0068861_100004602
251 Ga0068860_100007095
252 Ga0068860_100118322
253 Ga0068860_100125657
254 Ga0081540_1001649
255 Ga0097621_100132524
256 Ga0068871_100041682
257 Ga0075428_100027768
258 Ga0075428_100300317
259 Ga0075430_100142475
260 Ga0075431_100019709
261 Ga0097620_100000333
262 Ga0097620_100081546
263 Ga0105240_10001675
264 Ga0105240_10027432
265 Ga0105240_10046078
266 Ga0105240_10083907
267 Ga0105240_10215654
268 Ga0111539_10125522
269 Ga0114129_10029458
270 Ga0114129_10492317
271 Ga0105242_10010467
272 Ga0105242_10030570
273 Ga0105237_10004003
274 Ga0105237_10012157
275 Ga0105237_10017955
276 Ga0105237_10047144
277 Ga0105237_10090549
278 Ga0105238_10023097
279 Ga0105249_10094174
280 Ga0105239_10000155
281 Ga0105239_10007798
282 Ga0105239_10063308
283 Ga0105239_10267015
284 Ga0157371_10012230
285 Ga0157370_10001018
286 Ga0157370_10021167
287 Ga0157369_10017224
288 Ga0157374_10000025
289 Ga0157374_10288821
290 Ga0163162_10235047
291 Ga0157372_10000294
292 Ga0157372_10000582
293 Ga0157372_10174407
294 Ga0157380_10021416
295 Ga0157376_10000892
296 Ga0157376_10210321
297 Ga0163161_10099007
298 Ga0213876_10024372
299 Ga0207426_1000189
300 Ga0207643_10073133
301 Ga0207654_10036598
302 Ga0207695_10000282
303 Ga0207695_10018837
304 Ga0207695_10036953
305 Ga0207671_10017710
306 Ga0207671_10022721
307 Ga0207662_10030936
308 Ga0207659_10099501
309 Ga0207686_10001130
310 Ga0207686_10120484
311 Ga0207669_10057518
312 Ga0207691_10011222
313 Ga0207689_10016182
314 Ga0207661_10019793
315 Ga0207667_10000403
316 Ga0207667_10002943
317 Ga0207667_10005819
318 Ga0207667_10014501
319 Ga0207651_10168903
320 Ga0207712_10004165
321 Ga0207668_10121570
322 Ga0207639_10019475
323 Ga0207639_10034462
324 Ga0207702_10152007
325 Ga0207641_10000549
326 Ga0207674_10000600
327 Ga0207674_10161894
328 Ga0207675_100034811
329 Ga0268266_10000026
330 Ga0268264_10004574
331 Ga0268264_10065694
332 Ga0265338_10257544
333 Ga0307511_10000228
334 Ga0265316_10002314
335 Ga0265316_10202417
336 Ga0307508_10141015
337 Ga0316579_10011880
338 Ga0307516_10001571
339 Ga0316577_10015544
340 Ga0307414_10000028
341 Ga0307414_10091244
342 Ga0316582_0041400
343 Ga0316584_0117200
344 Ga0400483_221147
345 Ga0400489_70234
346 Ga0436365_0329409
347 Ga0439433_0018205
348 Ga0451577_0064663
349 Ga0451577_0074192
350 Ga0451577_0120999
351 Ga0451577_0205451
352 Ga0466969_0000711
353 Ga0466972_0000032
354 Ga0466972_0000500
355 Ga0453683_0000005
356 Ga0453683_0000463
357 Ga0466966_0073611
358 Ga0466961_0078341
359 Ga0453684_0004818
360 Ga0453684_0008678
361 Ga0453684_0012294
362 Ga0453684_0018670
363 Ga0453684_0033189
364 Ga0453684_0056421
365 Ga0453684_0071043
366 Ga0453684_0095956
367 Ga0453684_0123423
368 Ga0453684_0266477
369 Ga0453684_0479521
370 Ga0453684_0516815
371 Ga0466959_0000566
372 Ga0451576_0002174
373 Ga0466958_0098301
374 Ga0495638_0097848
375 Ga0495648_0001530
376 Ga0495668_0001215
377 Ga0495625_0120827
378 Ga0495672_0013768
379 Ga0495672_0044967
380 Ga0495686_0004111
381 Ga0496114_0000659
382 Ga0496115_0005476
383 Ga0501032_0113499
384 Ga0501034_0001624
385 Ga0501036_0000569
386 Ga0501037_0138669
387 Ga0501038_0074251
388 Ga0501039_0046456
389 Ga0501043_0043872
390 Ga0501047_0003998
391 Ga0501047_0025036
392 Ga0501067_0009046
393 Ga0501073_0004411
394 Ga0501073_0008818
395 Ga0501074_0007699
396 Ga0501219_000067
397 Ga0501079_0024284
398 Ga0501080_0060780
399 Ga0501083_0007944
400 Ga0501035_0032180
401 Ga0501044_0013350
402 Ga0501044_0277859
403 Ga0501284_00015
404 nmdc:mga05p37_46688_c1
405 nmdc:mga09592_188193_c1
406 nmdc:mga0qj67_81649_c1
407 nmdc:mga08y16_116649_c1
408 Ga0500578_0000001
409 Ga0500583_0019189
410 Ga0500562_000015
411 Ga0500642_0026146
412 Ga0500622_0000118
413 Ga0500622_0013204
414 Ga0500645_004617
415 Ga0501084_0094231
416 Ga0501082_0021123
417 Ga0466962_0005230
418 2740031173
419 2884636453
420 2910249226
421 2919692700
422 2929160173

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02547

Queuosine_synth

Queuosine biosynthesis protein

90

488

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
4jci-assembly1.cif.gz_B crystal structure of csal_2705, a putative hydroxyproline epimerase from chromohalobacter salexigens (target efi-506486), space group p212121, unliganded 0.749 115 150
4jci-assembly1.cif.gz_A crystal structure of csal_2705, a putative hydroxyproline epimerase from chromohalobacter salexigens (target efi-506486), space group p212121, unliganded 0.7371 115 150
4k7x-assembly1.cif.gz_A-2 crystal structure of a 4-hydroxyproline epimerase from burkholderia multivorans, target efi-506479, with bound phosphate, closed domains 0.6824 115 152
1vky-assembly1.cif.gz_A crystal structure of s-adenosylmethionine trna ribosyltransferase (tm0574) from thermotoga maritima at 2.00 a resolution 0.6766 11 398
1vky-assembly1.cif.gz_A crystal structure of s-adenosylmethionine trna ribosyltransferase (tm0574) from thermotoga maritima at 2.00 a resolution 0.672 11 398
ID Description Score Start End Superfamily
1vkyA01 Alpha Beta;3-Layer(aba) Sandwich;QueA-like;QueA-like 0.914 11 398 3.40.1780.10
1vkyA01 Alpha Beta;3-Layer(aba) Sandwich;QueA-like;QueA-like 0.9054 11 398 3.40.1780.10
af_P0A7F9_64_163_3.40.1780.10 Alpha Beta;3-Layer(aba) Sandwich;QueA-like;QueA-like 0.7287 68 183 3.40.1780.10
af_P0A7F9_64_163_3.40.1780.10 Alpha Beta;3-Layer(aba) Sandwich;QueA-like;QueA-like 0.7108 68 183 3.40.1780.10
af_A0A0R4IZL6_222_359_3.30.450.190 Alpha Beta;2-Layer Sandwich;Beta-Lactamase; 0.6818 118 152 3.30.450.190
ID Description Score Start End GO Terms
AF-A0A3N7A0K9-F1-model_v4 S-adenosylmethionine tRNA ribosyltransferase 0.9761 2 401 GO:0002099
GO:0005737
GO:0008616
GO:0051075
AF-A0A1M3E899-F1-model_v4 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 2.4.99.17) (Queuosine biosynthesis protein QueA) 0.9683 2 398 GO:0002099
GO:0005737
GO:0008616
GO:0051075
AF-A0A839GPH7-F1-model_v4 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 2.4.99.17) 0.9673 2 399 GO:0002099
GO:0005737
GO:0008616
GO:0051075
AF-A0A5C7MEH0-F1-model_v4 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.9671 3 402 GO:0002099
GO:0005737
GO:0008616
GO:0051075
AF-A0A1J5AQG4-F1-model_v4 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.9642 2 400 GO:0002099
GO:0005737
GO:0008616
GO:0051075

Map