F320161

General Info

Members Datasets Scaffolds Average Seq Length
210 132 176 820

Family's Representative Sequence

Representative Sequence 3300005843|Ga0068860_100015539|Ga0068860_1000155393
Length 937
Sequence MEKTLKNMMPVMAVEHDAILSKQGDITIAFMAELPELFTLSDRDYEAFHQAWIRAIKVLPPHCVCHKQDWFIDSKYKPNFAKAGDSFLSRSSEQFFNERPYLDHECFIFLTKKPAGRKVATSLFSNLLRNSIVPEQTLKPQMLQDFLDSVGQFKRILEDSGFIHLKRQKNEELVSHKNEAGIVERYCFLLENDKDLRIKDISYNGGIQIGNEYCQLYTIADGQDLPALCGSRINYDKYSTDKTKFSVGFASPLGQLLSCNHIYNQYIFIDDAQKTIQKLESKRLRLQSLSAYSRENTIGRDATNDFLNEAVSQQRLPVKAHFNILVWTENKEELKDLRNLVSSALTQMDAVPRQEVSGAPQIHWAGIPGNAADFPVNDTFDTFAEQACCFLNLETNYRSSVSPVGIRLGDRLSGKPVHVDISDEPMQKGICTNRNKFILGPSGSGKSFFTNHMVRSYFEQGTHVVLIDVGHSYKGLCNLVNGYYFTYNEKNPIKFNPFYIGEGDLLDTEKKESIKTLLLALWKKDNENFNRSEYVALSNALQLYYEHLEKDKNLFPCFNTFYEFLQTGFVQVLIDDKVKDKDFDVSNFLYVLRPYYKGGEFDYLLNATANLNLLQQRFIVFELDNIKDHPILFPVVTIIIMEVFISKMRKLKGVRKMILIEEAWKAIAKEGMAEYIKYLFKTVRKFFGEAIVVTQDVEDIISSPVVKQAIINNSDCKILLDQSKYQNKFDHVQELLGLTEKEKALVLSINKANDPSKKYKEVFISLGGMLSKVYRVEVSMEEYLAYTTEESEKVKVNEYSKKYGSMKKGIAALAAELRSGVLSVLLLFVWCMSCTNEVEDISGTYVHHSVNNMSIASDTVTIRSYNKGTYLIERRTGFNRVINGVLQTRLCKKENSIGVIDAGGTQLIEQKYGRIYAVSSSGSELMIGKATYKRIAP

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2511231000 Chryseobacterium populi CF314 Isolate Rhizosphere
3 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
4 2582581281 Chryseobacterium sp. CF284 Isolate Rhizosphere
5 2582581282 Chryseobacterium sp. CF299 Isolate Rhizosphere
6 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
7 2643221667 Flavobacterium sp. Root420 Isolate Unclassified
8 2643221725 Flavobacterium sp. Root935 Isolate Unclassified
9 2738541279 Flavobacterium sp. GV069 Isolate Unclassified
10 2738541285 Flavobacterium sp. GV030 Isolate Unclassified
11 2738543007 Flavobacterium sp. GV063 Isolate Unclassified
12 2739367866 Hymenobacter sp. YR204 Isolate Unclassified
13 2881247448 Flavobacterium beibuense RSKm HC5 Isolate Rhizosphere
14 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
15 2890737413 Parapedobacter sp. SGR-10 Isolate Rhizosphere
16 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
17 2903895155 Flavobacterium sp. HBTb2-11-1 Isolate Rhizosphere
18 2904555929 Flavobacterium sp. 1750 Isolate Rhizosphere
19 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
20 2919191525 Flavobacterium sp. 2755 Isolate Rhizosphere
21 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere
22 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
23 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
24 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
25 2958458903 Flavobacterium anhuiense RCM74 Isolate Rhizosphere
26 2958512119 Flavobacterium sp. Sd200 Isolate Rhizosphere
27 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
28 2977268062 Flavobacterium sp. SORGH_AS 622 Isolate Unclassified
29 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
30 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
31 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
32 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
33 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
34 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
35 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
36 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
37 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
38 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
39 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
40 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
41 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
42 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
43 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
44 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
45 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
46 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
47 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
48 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
52 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
57 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
58 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
59 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
60 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
63 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
64 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
65 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
66 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
67 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
68 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
70 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
89 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
91 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
92 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
93 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
94 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
95 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
96 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
97 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
98 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
99 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
100 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
101 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
102 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
103 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
104 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
105 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
106 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
107 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
108 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
109 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
110 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
111 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
112 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
113 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
114 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
115 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
116 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
117 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
118 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
121 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
122 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
123 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
124 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
125 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
126 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
127 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
128 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
129 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
130 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
131 8055592153 Flavobacterium panacis DCY106 Isolate Rhizosphere
132 8056440228 Flavobacterium hibisci THG-HG1.4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 83.81
Metatranscriptomes 0
Isolates 16.19

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.52
Nodule 1.9
Rhizoplane 0.48
Rhizosphere 71.43
Stem 0
Stem Tuber 0
Unclassified 16.67

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_2732696 2162886007 Bacteria 84561
2 JGI24740J21852_10000174 3300001979 Bacteria 25728
3 rootH1_10002495 3300003316 Bacteria 67812
4 rootH2_10000091 3300003320 Bacteria 30060
5 rootH2_10128694 3300003320 Bacteria 5384
6 rootL2_10000574 3300003322 Bacteria 5479
7 rootL2_10022409 3300003322 Bacteria 13939
8 rootL2_10032710 3300003322 Bacteria 16561
9 rootH1_10000566 3300003316 Bacteria 33162
10 rootH1_10000566 3300003323 Bacteria 205679
11 rootH1_10000904 3300003323 Bacteria 75663
12 rootH1_10030659 3300003323 Bacteria 18564
13 rootH1_10038614 3300003323 Bacteria 23905
14 Ga0055531_10000077 3300003794 Bacteria 106111
15 Ga0055531_10000634 3300003794 Bacteria 30259
16 Ga0065165_1000142 3300005262 Bacteria 124889
17 Ga0065165_1001399 3300005262 Bacteria 26323
18 Ga0065704_10000205 3300005289 Bacteria 128899
19 Ga0065704_10000221 3300005289 Bacteria 134976
20 Ga0070658_10011615 3300005327 Bacteria 7064
21 Ga0070658_10017672 3300005327 Bacteria 5705
22 Ga0070680_100016020 3300005336 Bacteria 5891
23 Ga0070660_100002205 3300005339 Bacteria 13429
24 Ga0070659_100009098 3300005366 Bacteria 7286
25 Ga0070679_100000578 3300005530 Bacteria 31104
26 Ga0070679_100004956 3300005530 Bacteria 12287
27 Ga0068855_100000014 3300005563 Bacteria 232720
28 Ga0068855_100099545 3300005563 Bacteria 3348
29 Ga0068859_100007910 3300005617 Bacteria 10782
30 Ga0068863_100000100 3300005841 Bacteria 94010
31 Ga0068860_100015539 3300005843 Bacteria 7433
32 Ga0081539_10000252 3300005985 Bacteria 124764
33 Ga0075366_10005971 3300006195 Bacteria 6630
34 Ga0097620_100007910 3300006931 Bacteria 10782
35 Ga0079104_1000005 3300006946 Bacteria 407099
36 Ga0079104_1000023 3300006946 Bacteria 219954
37 Ga0105240_10000129 3300009093 Bacteria 155768
38 Ga0105240_10060158 3300009093 Bacteria 4736
39 Ga0105240_10131395 3300009093 Bacteria 3003
40 Ga0105241_10016894 3300009174 Bacteria 5356
41 Ga0105237_10000496 3300009545 Bacteria 55702
42 Ga0105237_10001541 3300009545 Bacteria 30097
43 Ga0105238_10056210 3300009551 Bacteria 3949
44 Ga0105249_10013089 3300009553 Bacteria 7323
45 Ga0105239_10000006 3300010375 Bacteria 442319
46 Ga0105239_10116843 3300010375 Bacteria 2960
47 Ga0105239_10129740 3300010375 Bacteria 2803
48 Ga0105246_10000127 3300011119 Bacteria 35078
49 Ga0157373_10000002 3300013100 Bacteria 750094
50 Ga0157373_10000008 3300013100 Bacteria 216306
51 Ga0157371_10000433 3300013102 Bacteria 51401
52 Ga0157371_10001798 3300013102 Bacteria 21688
53 Ga0157371_10005882 3300013102 Bacteria 10245
54 Ga0157371_10006282 3300013102 Bacteria 9840
55 Ga0157371_10009278 3300013102 Bacteria 7760
56 Ga0157371_10015619 3300013102 Bacteria 5689
57 Ga0157371_10027532 3300013102 Bacteria 4123
58 Ga0157370_10000050 3300013104 Bacteria 123492
59 Ga0157370_10000153 3300013104 Bacteria 84822
60 Ga0157370_10000191 3300013104 Bacteria 76405
61 Ga0157370_10000212 3300013104 Bacteria 73900
62 Ga0157370_10001320 3300013104 Bacteria 30887
63 Ga0157370_10004028 3300013104 Bacteria 17072
64 Ga0157370_10007419 3300013104 Bacteria 11937
65 Ga0157369_10000216 3300013105 Bacteria 79927
66 Ga0157369_10007311 3300013105 Bacteria 12712
67 Ga0163162_10000080 3300013306 Bacteria 87784
68 Ga0163162_10003112 3300013306 Bacteria 15847
69 Ga0157372_10012071 3300013307 Bacteria 9200
70 Ga0157372_10014772 3300013307 Bacteria 8358
71 Ga0157372_10092548 3300013307 Bacteria 3439
72 Ga0157372_10092715 3300013307 Bacteria 3436
73 Ga0157379_10021781 3300014968 Bacteria 5677
74 Ga0157376_10060357 3300014969 Bacteria 3184
75 Ga0182006_1000100 3300015261 Bacteria 97114
76 Ga0182006_1004977 3300015261 Bacteria 6402
77 Ga0163161_10000007 3300017792 Bacteria 301614
78 Ga0209233_1000604 3300025261 Bacteria 18532
79 Ga0209676_1000116 3300025292 Bacteria 203383
80 Ga0209758_1000922 3300025297 Bacteria 39755
81 Ga0209758_1002149 3300025297 Bacteria 20731
82 Ga0209257_1000001 3300025304 Bacteria 2274655
83 Ga0209257_1000007 3300025304 Bacteria 1564415
84 Ga0207680_10000324 3300025903 Bacteria 22888
85 Ga0207647_10000140 3300025904 Bacteria 57457
86 Ga0207705_10003326 3300025909 Bacteria 12221
87 Ga0207705_10029273 3300025909 Bacteria 3926
88 Ga0207654_10001924 3300025911 Bacteria 10777
89 Ga0207654_10016828 3300025911 Bacteria 3813
90 Ga0207695_10000206 3300025913 Bacteria 162179
91 Ga0207695_10071135 3300025913 Bacteria 3553
92 Ga0207695_10100837 3300025913 Bacteria 2882
93 Ga0207671_10000157 3300025914 Bacteria 105839
94 Ga0207657_10016945 3300025919 Bacteria 7009
95 Ga0207652_10000027 3300025921 Bacteria 151000
96 Ga0207652_10000077 3300025921 Bacteria 106573
97 Ga0207652_10000327 3300025921 Bacteria 49170
98 Ga0207690_10000476 3300025932 Bacteria 25790
99 Ga0207667_10000049 3300025949 Bacteria 235027
100 Ga0207667_10047636 3300025949 Bacteria 4536
101 Ga0207667_10100330 3300025949 Bacteria 2986
102 Ga0207712_10010516 3300025961 Bacteria 5873
103 Ga0207712_10034791 3300025961 Bacteria 3417
104 Ga0207703_10002085 3300026035 Bacteria 17576
105 Ga0207678_10017847 3300026067 Bacteria 6232
106 Ga0207702_10085449 3300026078 Bacteria 2750
107 Ga0207641_10000013 3300026088 Bacteria 341378
108 Ga0207641_10000426 3300026088 Bacteria 48936
109 Ga0207676_10003410 3300026095 Bacteria 11238
110 Ga0207698_10015489 3300026142 Bacteria 5106
111 Ga0209281_1000037 3300027111 Bacteria 368555
112 Ga0209281_1000094 3300027111 Bacteria 238155
113 Ga0268264_10004370 3300028381 Bacteria 12062
114 Ga0307515_10000001 3300028794 Bacteria 4259510
115 Ga0307515_10000114 3300028794 Bacteria 194024
116 Ga0307515_10000203 3300028794 Bacteria 145242
117 Ga0307515_10000408 3300028794 Bacteria 103931
118 Ga0307515_10068404 3300028794 Bacteria 4879
119 Ga0307511_10000882 3300030521 Bacteria 31732
120 Ga0265327_10000526 3300031251 Bacteria 66051
121 Ga0307408_100000225 3300031548 Bacteria 60134
122 Ga0307408_100000573 3300031548 Bacteria 31741
123 Ga0307408_100001340 3300031548 Bacteria 18454
124 Ga0307405_10000021 3300031731 Bacteria 155876
125 Ga0307413_10001731 3300031824 Bacteria 8526
126 Ga0307414_10000264 3300032004 Bacteria 32949
127 Ga0307414_10003569 3300032004 Bacteria 8325
128 Ga0307414_10015698 3300032004 Bacteria 4579
129 Ga0307414_10053579 3300032004 Bacteria 2814
130 Ga0307507_10000141 3300033179 Bacteria 125001
131 Ga0307507_10001179 3300033179 Bacteria 58154
132 Ga0395899_0000001 3300037312 Bacteria 1750322
133 Ga0395899_0027018 3300037312 Bacteria 4328
134 Ga0395899_0060264 3300037312 Bacteria 2796
135 Ga0395900_0000048 3300037418 Bacteria 227760
136 Ga0395900_0002909 3300037418 Bacteria 18659
137 Ga0395898_0014874 3300037466 Bacteria 7988
138 Ga0395905_0020970 3300037471 Bacteria 6188
139 Ga0395901_0001896 3300038443 Bacteria 21588
140 Ga0395901_0009824 3300038443 Bacteria 9702
141 Ga0453684_0000297 3300044712 Bacteria 210507
142 Ga0495638_0000001 3300046460 Bacteria 1114121
143 Ga0495650_0000013 3300046471 Bacteria 611135
144 Ga0495607_0003490 3300046501 Bacteria 12033
145 Ga0495606_0018714 3300046507 Bacteria 5183
146 Ga0495606_0020369 3300046507 Bacteria 4893
147 Ga0495616_0013288 3300046513 Bacteria 4651
148 Ga0495643_0007177 3300046522 Bacteria 7227
149 Ga0495648_0000542 3300046524 Bacteria 40768
150 Ga0495633_0000167 3300046558 Bacteria 86373
151 Ga0495625_0018167 3300046660 Bacteria 5496
152 Ga0495686_0000277 3300047472 Bacteria 90929
153 Ga0495686_0002849 3300047472 Bacteria 15585
154 Ga0495686_0008950 3300047472 Bacteria 7272
155 Ga0496116_0000179 3300048919 Bacteria 126710
156 Ga0496122_0005678 3300048925 Bacteria 14728
157 Ga0496125_0000026 3300048928 Bacteria 397380
158 Ga0495678_010494 3300049459 Bacteria 4501
159 Ga0501034_0001371 3300049571 Bacteria 32769
160 Ga0501034_0002025 3300049571 Bacteria 25511
161 Ga0501043_0015130 3300049579 Bacteria 6036
162 Ga0501070_0009542 3300049586 Bacteria 8200
163 Ga0501223_000799 3300049663 Bacteria 7466
164 Ga0501249_000014 3300049679 Bacteria 137700
165 Ga0501264_000875 3300049761 Bacteria 3853
166 Ga0501269_000001 3300049766 Bacteria 122581
167 Ga0501044_0007050 3300049823 Bacteria 12366
168 nmdc:mga0k408_10408_c1 3300050493 Bacteria 5029
169 nmdc:mga0k408_7700_c1 3300050493 Bacteria 5757
170 Ga0500641_0000002 3300053096 Bacteria 291538
171 Ga0500641_0000045 3300053096 Bacteria 62494
172 Ga0500616_0000004 3300053153 Bacteria 1002714
173 Ga0500616_0025968 3300053153 Bacteria 3247
174 Ga0500616_0028519 3300053153 Bacteria 3075
175 Ga0500622_0000067 3300053156 Bacteria 124626
176 Ga0500624_000459 3300053157 Bacteria 12195

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300032004 Ga0307414_10003569 Ga0307414_100035693 679
2 3300032004 Ga0307414_10053579 Ga0307414_100535791 679
3 3300053153 Ga0500616_0028519 Ga0500616_0028519_643_3048 682
4 3300046471 Ga0495650_0000013 Ga0495650_0000013_185576_187975 773
5 3300009545 Ga0105237_10000496 Ga0105237_1000049617 783
6 3300046501 Ga0495607_0003490 Ga0495607_0003490_9566_11929 787
7 3300003323 rootH1_10000566 rootH1_1000056642 788
8 3300028794 Ga0307515_10068404 Ga0307515_100684044 791
9 3300013102 Ga0157371_10005882 Ga0157371_100058827 794
10 3300025904 Ga0207647_10000140 Ga0207647_100001408 794
11 3300047472 Ga0495686_0008950 Ga0495686_0008950_3727_6186 798
12 3300006195 Ga0075366_10005971 Ga0075366_100059717 799
13 3300046507 Ga0495606_0018714 Ga0495606_0018714_29_2479 799
14 3300050493 nmdc:mga0k408_7700_c1 nmdc:mga0k408_7700_c1_2273_4732 799
15 3300033179 Ga0307507_10001179 Ga0307507_1000117924 800
16 3300050493 nmdc:mga0k408_10408_c1 nmdc:mga0k408_10408_c1_1811_4264 800
17 iso_pu_bacteria 2884933994 2884936826 803
18 3300005366 Ga0070659_100009098 Ga0070659_1000090986 804
19 3300025932 Ga0207690_10000476 Ga0207690_1000047624 804
20 iso_pu_bacteria 2928078545 2928081491 805
21 3300005339 Ga0070660_100002205 Ga0070660_1000022055 806
22 3300025919 Ga0207657_10016945 Ga0207657_100169457 806
23 3300009551 Ga0105238_10056210 Ga0105238_100562102 807
24 3300033179 Ga0307507_10000141 Ga0307507_1000014115 807
25 iso_pu_bacteria 2522125168 2522549004 807
26 iso_pu_bacteria 2932082852 2932083129 807
27 3300031251 Ga0265327_10000526 Ga0265327_1000052648 808
28 3300005617 Ga0068859_100007910 Ga0068859_1000079103 809
29 3300006931 Ga0097620_100007910 Ga0097620_1000079103 809
30 3300009093 Ga0105240_10060158 Ga0105240_100601586 809
31 3300009174 Ga0105241_10016894 Ga0105241_100168946 809
32 3300010375 Ga0105239_10129740 Ga0105239_101297402 809
33 3300013105 Ga0157369_10007311 Ga0157369_1000731113 809
34 3300013307 Ga0157372_10092715 Ga0157372_100927153 809
35 3300025913 Ga0207695_10100837 Ga0207695_101008372 809
36 3300025949 Ga0207667_10100330 Ga0207667_101003302 809
37 3300026095 Ga0207676_10003410 Ga0207676_1000341010 809
38 3300049459 Ga0495678_010494 Ga0495678_010494_349_2802 809
39 3300005530 Ga0070679_100000578 Ga0070679_10000057810 810
40 3300005563 Ga0068855_100099545 Ga0068855_1000995453 810
41 3300009093 Ga0105240_10131395 Ga0105240_101313953 810
42 3300013307 Ga0157372_10092548 Ga0157372_100925483 810
43 3300025911 Ga0207654_10016828 Ga0207654_100168283 810
44 3300025913 Ga0207695_10071135 Ga0207695_100711352 810
45 3300025921 Ga0207652_10000027 Ga0207652_1000002741 810
46 3300025949 Ga0207667_10047636 Ga0207667_100476365 810
47 3300026078 Ga0207702_10085449 Ga0207702_100854491 810
48 3300005262 Ga0065165_1000142 Ga0065165_100014227 811
49 3300010375 Ga0105239_10000006 Ga0105239_10000006306 811
50 3300025292 Ga0209676_1000116 Ga0209676_1000116135 811
51 3300028794 Ga0307515_10000114 Ga0307515_1000011437 811
52 3300028794 Ga0307515_10000408 Ga0307515_1000040882 811
53 3300037418 Ga0395900_0000048 Ga0395900_0000048_27474_29933 811
54 3300046524 Ga0495648_0000542 Ga0495648_0000542_7675_10128 811
55 3300046558 Ga0495633_0000167 Ga0495633_0000167_25464_27923 811
56 3300053157 Ga0500624_000459 Ga0500624_000459_6217_8667 811
57 iso_pu_bacteria 2928147474 2928148234 811
58 3300013306 Ga0163162_10003112 Ga0163162_1000311215 812
59 iso_pu_bacteria 2902048731 2902051850 812
60 3300013102 Ga0157371_10001798 Ga0157371_1000179813 813
61 3300013102 Ga0157371_10006282 Ga0157371_100062825 813
62 3300013104 Ga0157370_10007419 Ga0157370_1000741911 813
63 3300025909 Ga0207705_10029273 Ga0207705_100292735 813
64 3300025921 Ga0207652_10000327 Ga0207652_1000032729 813
65 3300037312 Ga0395899_0027018 Ga0395899_0027018_254_2704 813
66 3300037418 Ga0395900_0002909 Ga0395900_0002909_11757_14204 813
67 3300038443 Ga0395901_0001896 Ga0395901_0001896_10138_12588 813
68 3300038443 Ga0395901_0009824 Ga0395901_0009824_472_2919 813
69 iso_pu_bacteria 2739367866 2740034474 813
70 iso_pu_bacteria 2904780799 2904785300 813
71 3300003323 rootH1_10038614 rootH1_100386147 814
72 3300005841 Ga0068863_100000100 Ga0068863_10000010015 814
73 3300013104 Ga0157370_10000191 Ga0157370_1000019162 814
74 3300013104 Ga0157370_10000212 Ga0157370_1000021246 814
75 3300026088 Ga0207641_10000013 Ga0207641_10000013162 814
76 3300032004 Ga0307414_10015698 Ga0307414_100156983 814
77 3300046522 Ga0495643_0007177 Ga0495643_0007177_3776_6235 814
78 iso_pu_bacteria 2643221667 2644372471 814
79 iso_pu_bacteria 2643221667 2644373063 814
80 iso_pu_bacteria 2643221725 2644685922 814
81 iso_pu_bacteria 2738541279 2738734611 814
82 iso_pu_bacteria 2738541285 2738767370 814
83 iso_pu_bacteria 2738543007 2739216193 814
84 iso_pu_bacteria 2890737413 2890738998 814
85 iso_pu_bacteria 2903895155 2903896983 814
86 iso_pu_bacteria 2904555929 2904555994 814
87 iso_pu_bacteria 2919191525 2919193650 814
88 iso_pu_bacteria 2919692658 2919697716 814
89 iso_pu_bacteria 2958458903 2958461063 814
90 iso_pu_bacteria 2958512119 2958514649 814
91 iso_pu_bacteria 2977268062 2977269088 814
92 iso_pu_bacteria 2977268062 2977270140 814
93 iso_pu_bacteria 2977268062 2977270836 814
94 iso_pu_bacteria 8055592153 8055593519 814
95 iso_pu_bacteria 8056440228 8056441621 814
96 3300003320 rootH2_10128694 rootH2_101286943 815
97 3300014969 Ga0157376_10060357 Ga0157376_100603572 815
98 3300028794 Ga0307515_10000203 Ga0307515_1000020328 815
99 3300037471 Ga0395905_0020970 Ga0395905_0020970_853_3360 815
100 3300049579 Ga0501043_0015130 Ga0501043_0015130_1747_4215 815
101 3300049766 Ga0501269_000001 Ga0501269_000001_30647_33148 815
102 iso_pu_bacteria 2511231000 2511232105 815
103 iso_pu_bacteria 2582581281 2585155952 815
104 iso_pu_bacteria 2582581282 2585160124 815
105 iso_pu_bacteria 2599185184 2599476696 815
106 iso_pu_bacteria 2977232053 2977232160 815
107 iso_pu_bacteria 2977232053 2977232220 815
108 3300010375 Ga0105239_10116843 Ga0105239_101168431 816
109 3300013306 Ga0163162_10000080 Ga0163162_100000808 816
110 3300031548 Ga0307408_100000573 Ga0307408_10000057325 816
111 iso_pu_bacteria 2881247448 2881248376 816
112 3300001979 JGI24740J21852_10000174 JGI24740J21852_1000017415 817
113 3300003794 Ga0055531_10000077 Ga0055531_1000007742 817
114 3300005262 Ga0065165_1001399 Ga0065165_10013996 817
115 3300005289 Ga0065704_10000221 Ga0065704_1000022164 817
116 3300005327 Ga0070658_10017672 Ga0070658_100176725 817
117 3300005985 Ga0081539_10000252 Ga0081539_1000025224 817
118 3300013102 Ga0157371_10000433 Ga0157371_1000043342 817
119 3300013102 Ga0157371_10015619 Ga0157371_100156194 817
120 3300013104 Ga0157370_10000153 Ga0157370_1000015360 817
121 3300013307 Ga0157372_10012071 Ga0157372_100120719 817
122 3300013307 Ga0157372_10014772 Ga0157372_100147729 817
123 3300025261 Ga0209233_1000604 Ga0209233_100060411 817
124 3300025297 Ga0209758_1000922 Ga0209758_100092210 817
125 3300025304 Ga0209257_1000007 Ga0209257_1000007641 817
126 3300025909 Ga0207705_10003326 Ga0207705_1000332613 817
127 3300025961 Ga0207712_10034791 Ga0207712_100347913 817
128 3300026067 Ga0207678_10017847 Ga0207678_100178474 817
129 3300026142 Ga0207698_10015489 Ga0207698_100154896 817
130 3300031548 Ga0307408_100000225 Ga0307408_10000022525 817
131 3300037312 Ga0395899_0000001 Ga0395899_0000001_265631_268120 817
132 3300037312 Ga0395899_0060264 Ga0395899_0060264_147_2612 817
133 3300037466 Ga0395898_0014874 Ga0395898_0014874_2473_4938 817
134 3300046507 Ga0495606_0020369 Ga0495606_0020369_2022_4511 817
135 3300053156 Ga0500622_0000067 Ga0500622_0000067_38771_41242 817
136 2162886007 SwRhRL2b_contig_2732696 SwRhRL2b_0490.00004560 818
137 3300003316 rootH1_10002495 rootH1_1000249523 818
138 3300003320 rootH2_10000091 rootH2_1000009128 818
139 3300003322 rootL2_10000574 rootL2_100005746 818
140 3300003322 rootL2_10022409 rootL2_100224099 818
141 3300003322 rootL2_10032710 rootL2_1003271018 818
142 3300003323 rootH1_10000904 rootH1_1000090430 818
143 3300003323 rootH1_10030659 rootH1_100306596 818
144 3300003794 Ga0055531_10000634 Ga0055531_1000063427 818
145 3300005289 Ga0065704_10000205 Ga0065704_10000205111 818
146 3300005327 Ga0070658_10011615 Ga0070658_100116153 818
147 3300005336 Ga0070680_100016020 Ga0070680_1000160206 818
148 3300005530 Ga0070679_100004956 Ga0070679_1000049562 818
149 3300005563 Ga0068855_100000014 Ga0068855_10000001490 818
150 3300005843 Ga0068860_100015539 Ga0068860_1000155393 818
151 3300006946 Ga0079104_1000005 Ga0079104_100000592 818
152 3300006946 Ga0079104_1000023 Ga0079104_100002395 818
153 3300009093 Ga0105240_10000129 Ga0105240_1000012968 818
154 3300009545 Ga0105237_10001541 Ga0105237_1000154119 818
155 3300009553 Ga0105249_10013089 Ga0105249_100130893 818
156 3300011119 Ga0105246_10000127 Ga0105246_1000012724 818
157 3300013100 Ga0157373_10000002 Ga0157373_10000002443 818
158 3300013100 Ga0157373_10000008 Ga0157373_10000008112 818
159 3300013102 Ga0157371_10009278 Ga0157371_100092788 818
160 3300013102 Ga0157371_10027532 Ga0157371_100275324 818
161 3300013104 Ga0157370_10000050 Ga0157370_1000005087 818
162 3300013104 Ga0157370_10001320 Ga0157370_1000132014 818
163 3300013104 Ga0157370_10004028 Ga0157370_1000402811 818
164 3300013105 Ga0157369_10000216 Ga0157369_1000021613 818
165 3300014968 Ga0157379_10021781 Ga0157379_100217815 818
166 3300015261 Ga0182006_1000100 Ga0182006_100010020 818
167 3300015261 Ga0182006_1004977 Ga0182006_10049775 818
168 3300017792 Ga0163161_10000007 Ga0163161_1000000746 818
169 3300025297 Ga0209758_1002149 Ga0209758_100214913 818
170 3300025304 Ga0209257_1000001 Ga0209257_1000001253 818
171 3300025903 Ga0207680_10000324 Ga0207680_1000032420 818
172 3300025911 Ga0207654_10001924 Ga0207654_100019248 818
173 3300025913 Ga0207695_10000206 Ga0207695_1000020676 818
174 3300025914 Ga0207671_10000157 Ga0207671_1000015785 818
175 3300025921 Ga0207652_10000077 Ga0207652_1000007763 818
176 3300025949 Ga0207667_10000049 Ga0207667_1000004988 818
177 3300025961 Ga0207712_10010516 Ga0207712_100105163 818
178 3300026035 Ga0207703_10002085 Ga0207703_1000208515 818
179 3300026088 Ga0207641_10000426 Ga0207641_1000042619 818
180 3300027111 Ga0209281_1000037 Ga0209281_1000037146 818
181 3300027111 Ga0209281_1000094 Ga0209281_100009489 818
182 3300028381 Ga0268264_10004370 Ga0268264_1000437010 818
183 3300028794 Ga0307515_10000001 Ga0307515_100000011906 818
184 3300030521 Ga0307511_10000882 Ga0307511_1000088220 818
185 3300031548 Ga0307408_100001340 Ga0307408_10000134012 818
186 3300031731 Ga0307405_10000021 Ga0307405_1000002189 818
187 3300031824 Ga0307413_10001731 Ga0307413_100017313 818
188 3300032004 Ga0307414_10000264 Ga0307414_1000026422 818
189 3300044712 Ga0453684_0000297 Ga0453684_0000297_43426_45903 818
190 3300046460 Ga0495638_0000001 Ga0495638_0000001_663317_665797 818
191 3300046460 Ga0495638_0000001 Ga0495638_0000001_718719_721196 818
192 3300046513 Ga0495616_0013288 Ga0495616_0013288_1980_4454 818
193 3300046660 Ga0495625_0018167 Ga0495625_0018167_2790_5270 818
194 3300047472 Ga0495686_0000277 Ga0495686_0000277_18518_20992 818
195 3300047472 Ga0495686_0002849 Ga0495686_0002849_1916_4387 818
196 3300048919 Ga0496116_0000179 Ga0496116_0000179_55091_57562 818
197 3300048925 Ga0496122_0005678 Ga0496122_0005678_7179_9650 818
198 3300048928 Ga0496125_0000026 Ga0496125_0000026_74750_77218 818
199 3300049571 Ga0501034_0001371 Ga0501034_0001371_20339_22807 818
200 3300049571 Ga0501034_0002025 Ga0501034_0002025_14093_16561 818
201 3300049586 Ga0501070_0009542 Ga0501070_0009542_5088_7580 818
202 3300049663 Ga0501223_000799 Ga0501223_000799_3392_5881 818
203 3300049679 Ga0501249_000014 Ga0501249_000014_10088_12559 818
204 3300049761 Ga0501264_000875 Ga0501264_000875_1270_3750 818
205 3300049823 Ga0501044_0007050 Ga0501044_0007050_3808_6300 818
206 3300053096 Ga0500641_0000002 Ga0500641_0000002_71827_74295 818
207 3300053096 Ga0500641_0000045 Ga0500641_0000045_39266_41734 818
208 3300053153 Ga0500616_0000004 Ga0500616_0000004_39980_42460 818
209 3300053153 Ga0500616_0025968 Ga0500616_0025968_455_2932 818
210 iso_pu_bacteria 2958512119 2958514024 818

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF19044

P-loop_TraG

TraG P-loop domain

405

817

1

PF12991

DUF3875

Domain of unknown function, B. Theta Gene description (DUF3875)

1

50

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ag5-assembly1.cif.gz_D structure of virb4 of thermoanaerobacter pseudethanolicus 0.7362 432 709
4ag6-assembly1.cif.gz_A structure of virb4 of thermoanaerobacter pseudethanolicus 0.7357 397 782
4ag6-assembly2.cif.gz_B structure of virb4 of thermoanaerobacter pseudethanolicus 0.7349 396 782
4kfu-assembly2.cif.gz_B structure of the genome packaging ntpase b204 from sulfolobus turreted icosahedral virus 2 in complex with amppcp 0.7313 434 777
4ag6-assembly2.cif.gz_B structure of virb4 of thermoanaerobacter pseudethanolicus 0.7298 396 782
ID Description Score Start End Superfamily
af_P39285_986_1078_3.30.70.100 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.7805 320 348 3.30.70.100
af_Q2G1I6_1_239_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7782 635 719 3.40.50.300
3fvqB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7221 657 722 3.40.50.300
af_Q2FWW7_2_234_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.721 633 721 3.40.50.300
4kftA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7133 434 778 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A096B5X2-F1-model_v4 deleted 0.9551 398 653
AF-A0A4Q5ND35-F1-model_v4 deleted 0.9468 387 817
AF-A0A015UC23-F1-model_v4 Conjugation system ATPase, TraG family protein 0.9413 1 664
AF-A0A642PKL4-F1-model_v4 TraG family conjugative transposon ATPase 0.9364 112 816
AF-A0A239LHB3-F1-model_v4 Bacteroides conjugation system ATPase, TraG family 0.9351 1 387

Feature Viewer

pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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