F319676

General Info

Members Datasets Scaffolds Average Seq Length
209 156 178 478

Family's Representative Sequence

Representative Sequence 3300050510|nmdc:mga06r32_41506_c1|nmdc:mga06r32_41506_c1_243_1841
Length 532
Sequence MVSLTVFMKLTSRNIAGTGRRPSIASAGGLDVSCLCIYTTTLQPENSRTEGARVYESLGLYIEGAWRTGASGRTRPVIDPSTERQLGDVPVAEASDVEAAILAAEMARHRWTKLDPWQRARIIRRIGDFVREREADFSRMVAQELGRPAKHVAGEVALSADQFEWFAEETKRIYGQTIESRQAGGRIVISHEPVGVVAAFTAWNFPLVLLARKIAPALAAGCSIICRPSEETPGSAMLLIKCCHDAGLPPGLVNLVLGKADEIAAIVMASPIVRKISLTGSISVGKKLFRQSAETLKRMSMELGGHAPVIVCADADARKAAELTVPVKFRNAGQVCVSPSRYYIHESKVEEFTSHFVQLTKKLKIGSPYANDTDVGPLGTEKRLRQIEELVEETKRDGARLECGGRRPHEFNAGYYYEPTVFSGCRDEMRIMREEVFGPVVPISSFSGVEEVLERANKIEYGLASYVFTRDAATANKISGELKAGMVGVNTYALAAAEVPFGGVRDSGFGREGGIYALRDYLEPKYTHFVPL

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2521172590 Herbaspirillum sp. GW103 Isolate Rhizosphere
3 2551306416 Herbaspirillum seropedicae Os34 Isolate Unclassified
4 2582581306 Rhizobium sp. YR295 Isolate Rhizosphere
5 2582581865 Rhizobium sp. CF258 Isolate Rhizosphere
6 2643221591 Devosia sp. Root685 Isolate Unclassified
7 2671180531 Gemmata sp. SH-PL17 Isolate Unclassified
8 2687453257 Planctomyces sp. SH-PL62 Isolate Unclassified
9 2808606415 Herbaspirillum sp. SJZ130 Isolate Rhizosphere
10 2808606419 Herbaspirillum sp. SJZ106 Isolate Rhizosphere
11 2841911363 Bosea caraganae RCAM04685 Isolate Nodule
12 2841917233 Bosea caraganae RCAM04680 Isolate Nodule
13 2852618963 Herbaspirillum sp. SJZ102 Isolate Rhizosphere
14 2857604169 Domibacillus sp. R-71921 Isolate Unclassified
15 2864997549 Paenibacillus sp. R-72005 Isolate Unclassified
16 2870068957 Burkholderia sp. JP2-270 Isolate Unclassified
17 2889415604 Paludisphaera rhizosphaerae JC665 Isolate Rhizosphere
18 2891373044 Shinella sp. AETb1-6 Isolate Rhizosphere
19 2904439833 Herbaspirillum sp. 1589 Isolate Rhizosphere
20 2904530477 Herbaspirillum huttiense 611 Isolate Unclassified
21 2904584206 Herbaspirillum sp. 1050 Isolate Unclassified
22 2904589729 Herbaspirillum sp. 1130 Isolate Unclassified
23 2904601388 Herbaspirillum sp. 1273 Isolate Rhizosphere
24 2916971899 Alkalihalobacillus miscanthi AK13 Isolate Rhizosphere
25 2919079590 Herbaspirillum sp. 1173 Isolate Unclassified
26 2920107658 Aquisphaera insulae JC669 Isolate Rhizosphere
27 2923510766 Herbaspirillum rubrisubalbicans SLBN-127 Isolate Rhizosphere
28 2928130867 Herbaspirillum seropedicae 1977 Isolate Unclassified
29 2989349275 Shinella kummerowiae CCBAU 25048 Isolate Unclassified
30 3006973921 Bacillus sp. FJAT-49736 Isolate Rhizosphere
31 3006978542 Bacillus sp. FJAT-49705 Isolate Rhizosphere
32 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
34 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
35 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
36 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
37 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
38 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
39 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
40 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
41 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
45 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
46 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
47 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
48 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
49 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
50 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
51 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
52 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
56 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
57 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
58 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
59 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
60 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
63 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
64 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
80 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
83 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
84 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
85 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
86 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
87 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
88 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
89 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
90 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
91 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
92 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
93 3300042530 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530L_E14_082316_2047 Metagenome Rhizosphere
94 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
95 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
96 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
97 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
98 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
99 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
100 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
101 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
102 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
103 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
104 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
105 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
106 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
107 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
108 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
109 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
110 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
111 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
112 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
113 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
114 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
115 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
116 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
117 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
118 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
119 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
120 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
121 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
122 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
123 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
124 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
125 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
126 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
127 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
128 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
134 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
135 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
136 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
137 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
138 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
139 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
140 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
141 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
142 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
143 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
144 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
147 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
148 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
149 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
150 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
151 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
152 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
153 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
154 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
155 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
156 8020945358 Burkholderia sp. BE17 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.17
Metatranscriptomes 0
Isolates 14.83

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.39
Nodule 0.96
Rhizoplane 13.88
Rhizosphere 66.51
Stem 0
Stem Tuber 0
Unclassified 16.27

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_84769 2162886007 Bacteria 26687
2 JGI25406J46586_10001055 3300003203 Bacteria 12935
3 rootH1_10095056 3300003323 Unclassified 1678
4 Ga0065704_10070242 3300005289 Bacteria 50451
5 Ga0070678_100000665 3300005456 Bacteria 16871
6 Ga0070697_100113088 3300005536 Bacteria 2265
7 Ga0070693_100038195 3300005547 Bacteria 2682
8 Ga0070665_100032608 3300005548 Bacteria 5243
9 Ga0068855_100000165 3300005563 Bacteria 85018
10 Ga0068855_100006091 3300005563 Bacteria 14710
11 Ga0068855_100211783 3300005563 Bacteria 2177
12 Ga0068856_100015363 3300005614 Bacteria 7399
13 Ga0068856_100334562 3300005614 Bacteria 1532
14 Ga0068866_10033376 3300005718 Bacteria 2497
15 Ga0068858_100026195 3300005842 Bacteria 5421
16 Ga0068860_100000023 3300005843 Bacteria 279076
17 Ga0081455_10024968 3300005937 Bacteria 5523
18 Ga0081539_10002430 3300005985 Bacteria 26301
19 Ga0070717_10010197 3300006028 Bacteria 7077
20 Ga0070717_10210229 3300006028 Bacteria 1707
21 Ga0075366_10000459 3300006195 Bacteria 18956
22 Ga0075370_10020323 3300006353 Bacteria 3627
23 Ga0075428_100013684 3300006844 Bacteria 9033
24 Ga0075431_100001645 3300006847 Bacteria 20930
25 Ga0075429_100008179 3300006880 Bacteria 9091
26 Ga0068865_100046291 3300006881 Bacteria 2984
27 Ga0105240_10024317 3300009093 Bacteria 7989
28 Ga0114129_10002004 3300009147 Bacteria 27885
29 Ga0105243_10162407 3300009148 Bacteria 1927
30 Ga0105241_10013846 3300009174 Bacteria 5908
31 Ga0105242_10004254 3300009176 Bacteria 11156
32 Ga0105248_10029833 3300009177 Bacteria 6086
33 Ga0105237_10003698 3300009545 Bacteria 18033
34 Ga0105238_10001771 3300009551 Bacteria 21656
35 Ga0105239_10000889 3300010375 Bacteria 42397
36 Ga0157378_10007396 3300013297 Bacteria 9593
37 Ga0182006_1004443 3300015261 Bacteria 6918
38 Ga0207710_10017737 3300025900 Bacteria 3020
39 Ga0207695_10002264 3300025913 Bacteria 28816
40 Ga0207671_10008669 3300025914 Bacteria 8585
41 Ga0207693_10090486 3300025915 Bacteria 2399
42 Ga0207694_10000111 3300025924 Bacteria 85677
43 Ga0207686_10177680 3300025934 Bacteria 1507
44 Ga0207709_10018704 3300025935 Bacteria 3885
45 Ga0207709_10038825 3300025935 Bacteria 2839
46 Ga0207665_10119130 3300025939 Bacteria 1863
47 Ga0207711_10160700 3300025941 Bacteria 2033
48 Ga0207689_10099104 3300025942 Bacteria 2394
49 Ga0207689_10130571 3300025942 Bacteria 2068
50 Ga0207661_10132643 3300025944 Bacteria 2136
51 Ga0207667_10000102 3300025949 Bacteria 137469
52 Ga0207667_10002623 3300025949 Bacteria 22264
53 Ga0207667_10175383 3300025949 Bacteria 2203
54 Ga0207678_10042474 3300026067 Bacteria 3938
55 Ga0207702_10179686 3300026078 Bacteria 1948
56 Ga0207683_10001171 3300026121 Bacteria 23719
57 Ga0207683_10142639 3300026121 Bacteria 2159
58 Ga0209999_1000057 3300027543 Bacteria 12303
59 Ga0209983_1003498 3300027665 Bacteria 3351
60 Ga0268264_10000008 3300028381 Bacteria 773387
61 Ga0265318_10017270 3300028577 Bacteria 2965
62 Ga0265331_10014992 3300031250 Bacteria 4109
63 Ga0307513_10139250 3300031456 Bacteria 2356
64 Ga0307513_10187785 3300031456 Bacteria 1921
65 Ga0395899_0013265 3300037312 Bacteria 6307
66 Ga0395905_0085232 3300037471 Bacteria 2961
67 Ga0436364_0805935 3300037853 Bacteria 1543
68 Ga0400483_109998 3300039062 Bacteria 12094
69 Ga0400483_120106 3300039062 Bacteria 8792
70 Ga0400483_251912 3300039062 Bacteria 4473
71 Ga0400483_287339 3300039062 Bacteria 14746
72 Ga0436365_0847198 3300039437 Bacteria 4259
73 Ga0436361_0579205 3300039447 Bacteria 5267
74 Ga0436362_0230902 3300039453 Bacteria 10914
75 Ga0439431_0009290 3300041997 Bacteria 2219
76 Ga0450916_001875 3300042530 Bacteria 2159
77 Ga0466963_0003460 3300044694 Bacteria 9046
78 Ga0453684_0001479 3300044712 Bacteria 66322
79 Ga0466958_0030924 3300045836 Bacteria 3182
80 Ga0495627_005131 3300046453 Bacteria 5343
81 Ga0495629_0035529 3300046459 Bacteria 3522
82 Ga0495638_0045305 3300046460 Bacteria 2767
83 Ga0495628_0177553 3300046516 Bacteria 1612
84 Ga0495622_0005967 3300046557 Bacteria 5659
85 Ga0495656_0007863 3300046615 Bacteria 3789
86 Ga0495625_0027653 3300046660 Bacteria 4263
87 Ga0495657_0085434 3300046675 Bacteria 2034
88 Ga0495671_0010503 3300046692 Bacteria 5126
89 Ga0495604_0038770 3300047317 Bacteria 3749
90 Ga0495680_0106542 3300047322 Bacteria 2083
91 Ga0496100_0005715 3300048903 Bacteria 6727
92 Ga0496102_0012444 3300048905 Bacteria 7362
93 Ga0496103_0004413 3300048906 Bacteria 8534
94 Ga0496104_0006517 3300048907 Bacteria 10268
95 Ga0496104_0010499 3300048907 Bacteria 8272
96 Ga0496104_0033809 3300048907 Bacteria 4765
97 Ga0496104_0090388 3300048907 Bacteria 2925
98 Ga0496105_0004210 3300048908 Bacteria 10805
99 Ga0496105_0005169 3300048908 Bacteria 9895
100 Ga0496105_0021457 3300048908 Bacteria 5226
101 Ga0496106_0007880 3300048909 Bacteria 7874
102 Ga0496107_0009085 3300048910 Bacteria 6890
103 Ga0496108_0020188 3300048911 Bacteria 5475
104 Ga0496108_0038008 3300048911 Bacteria 4010
105 Ga0496108_0050848 3300048911 Bacteria 3471
106 Ga0496109_0008782 3300048912 Bacteria 8605
107 Ga0496109_0021084 3300048912 Bacteria 5762
108 Ga0496109_0060528 3300048912 Bacteria 3460
109 Ga0496110_0003538 3300048913 Bacteria 11996
110 Ga0496110_0065701 3300048913 Bacteria 3208
111 Ga0496110_0078664 3300048913 Unclassified 2936
112 Ga0496110_0142813 3300048913 Bacteria 2164
113 Ga0496111_0003964 3300048914 Bacteria 9286
114 Ga0496114_0001642 3300048917 Bacteria 16968
115 Ga0496114_0012907 3300048917 Bacteria 6691
116 Ga0496114_0089887 3300048917 Bacteria 2607
117 Ga0496114_0101163 3300048917 Bacteria 2460
118 Ga0496115_0028551 3300048918 Bacteria 4374
119 Ga0496115_0090434 3300048918 Bacteria 2501
120 Ga0496116_0000536 3300048919 Bacteria 51012
121 Ga0496120_0049310 3300048923 Bacteria 2417
122 Ga0496121_0002445 3300048924 Bacteria 28394
123 Ga0496121_0028816 3300048924 Bacteria 5158
124 Ga0496121_0167866 3300048924 Bacteria 1597
125 Ga0496122_0001688 3300048925 Bacteria 34239
126 Ga0496122_0002724 3300048925 Bacteria 24495
127 Ga0496122_0014126 3300048925 Bacteria 7743
128 Ga0496123_0002197 3300048926 Bacteria 24824
129 Ga0496123_0017252 3300048926 Bacteria 5820
130 Ga0496125_0004247 3300048928 Bacteria 16695
131 Ga0496126_0081750 3300048929 Bacteria 2855
132 Ga0501032_0162168 3300049569 Bacteria 1468
133 Ga0501034_0021905 3300049571 Bacteria 6512
134 Ga0501038_0078783 3300049574 Bacteria 2780
135 Ga0501038_0093861 3300049574 Unclassified 2509
136 Ga0501043_0039700 3300049579 Bacteria 3700
137 Ga0501043_0109546 3300049579 Bacteria 2169
138 Ga0501043_0259822 3300049579 Bacteria 1336
139 Ga0501047_0090976 3300049581 Bacteria 2929
140 Ga0501047_0215738 3300049581 Bacteria 1776
141 Ga0501069_0034019 3300049585 Bacteria 2807
142 Ga0501070_0000107 3300049586 Bacteria 73460
143 Ga0501070_0001452 3300049586 Bacteria 21193
144 Ga0501070_0017911 3300049586 Bacteria 5947
145 Ga0501070_0047638 3300049586 Bacteria 3562
146 Ga0501070_0185563 3300049586 Bacteria 1711
147 Ga0501071_0020689 3300049587 Bacteria 4575
148 Ga0501071_0057676 3300049587 Bacteria 2807
149 Ga0501072_0004823 3300049588 Bacteria 10270
150 Ga0501072_0029560 3300049588 Bacteria 4282
151 Ga0501074_0062913 3300049590 Unclassified 2673
152 Ga0501075_0003923 3300049591 Bacteria 10019
153 Ga0501076_0003434 3300049592 Bacteria 11115
154 Ga0501077_0004543 3300049593 Bacteria 8439
155 Ga0501079_0003162 3300049741 Bacteria 12068
156 Ga0501079_0010954 3300049741 Bacteria 6909
157 Ga0501080_0022915 3300049742 Bacteria 5789
158 Ga0501080_0137217 3300049742 Bacteria 2263
159 Ga0501080_0270618 3300049742 Bacteria 1546
160 Ga0501083_0059055 3300049744 Bacteria 2566
161 Ga0501035_0011888 3300049822 Bacteria 8056
162 Ga0501035_0025156 3300049822 Bacteria 5457
163 Ga0501044_0027795 3300049823 Bacteria 5972
164 Ga0501044_0047679 3300049823 Bacteria 4431
165 Ga0501045_0002816 3300049824 Bacteria 11879
166 nmdc:mga0k408_407_c2 3300050493 Bacteria 16631
167 nmdc:mga05p37_226950_c1 3300050507 Bacteria 2251
168 nmdc:mga05p37_293498_c1 3300050507 Bacteria 1934
169 nmdc:mga06r32_41506_c1 3300050510 Bacteria 4372
170 Ga0495595_0015540 3300053084 Bacteria 3247
171 Ga0495595_0029127 3300053084 Bacteria 2469
172 Ga0495619_0003207 3300053085 Bacteria 10584
173 Ga0500643_000006 3300053087 Bacteria 479605
174 Ga0500651_0000717 3300053093 Bacteria 16308
175 Ga0501084_0010405 3300054114 Bacteria 7692
176 Ga0501084_0164588 3300054114 Bacteria 1872
177 Ga0501082_0004076 3300060353 Bacteria 12749
178 Ga0501082_0057806 3300060353 Bacteria 3341

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049569 Ga0501032_0162168 Ga0501032_0162168_20_1216 386
2 3300049586 Ga0501070_0185563 Ga0501070_0185563_449_1684 399
3 3300049742 Ga0501080_0270618 Ga0501080_0270618_323_1534 399
4 3300046692 Ga0495671_0010503 Ga0495671_0010503_424_1656 406
5 3300049579 Ga0501043_0259822 Ga0501043_0259822_16_1308 417
6 3300025913 Ga0207695_10002264 Ga0207695_1000226415 422
7 3300060353 Ga0501082_0057806 Ga0501082_0057806_1539_2924 426
8 3300003203 JGI25406J46586_10001055 JGI25406J46586_100010556 443
9 3300005985 Ga0081539_10002430 Ga0081539_1000243017 443
10 3300037471 Ga0395905_0085232 Ga0395905_0085232_834_2300 446
11 3300005563 Ga0068855_100006091 Ga0068855_10000609111 448
12 3300025949 Ga0207667_10002623 Ga0207667_1000262311 448
13 3300005614 Ga0068856_100334562 Ga0068856_1003345621 449
14 3300009093 Ga0105240_10024317 Ga0105240_100243174 449
15 3300009545 Ga0105237_10003698 Ga0105237_1000369811 449
16 3300009551 Ga0105238_10001771 Ga0105238_100017718 449
17 3300010375 Ga0105239_10000889 Ga0105239_1000088911 449
18 3300015261 Ga0182006_1004443 Ga0182006_10044433 449
19 3300025914 Ga0207671_10008669 Ga0207671_100086695 449
20 3300025924 Ga0207694_10000111 Ga0207694_1000011156 449
21 3300026078 Ga0207702_10179686 Ga0207702_101796861 449
22 3300048923 Ga0496120_0049310 Ga0496120_0049310_643_2085 450
23 3300006028 Ga0070717_10210229 Ga0070717_102102291 451
24 3300048919 Ga0496116_0000536 Ga0496116_0000536_30668_32041 454
25 3300048924 Ga0496121_0002445 Ga0496121_0002445_20327_21700 454
26 3300005843 Ga0068860_100000023 Ga0068860_100000023163 455
27 3300028381 Ga0268264_10000008 Ga0268264_1000000897 455
28 3300006353 Ga0075370_10020323 Ga0075370_100203233 456
29 3300054114 Ga0501084_0164588 Ga0501084_0164588_151_1617 458
30 3300041997 Ga0439431_0009290 Ga0439431_0009290_186_1631 459
31 iso_pu_bacteria 2857604169 2857605704 459
32 3300025944 Ga0207661_10132643 Ga0207661_101326432 460
33 3300026121 Ga0207683_10142639 Ga0207683_101426392 460
34 3300049581 Ga0501047_0215738 Ga0501047_0215738_108_1535 462
35 3300049586 Ga0501070_0047638 Ga0501070_0047638_158_1585 462
36 3300048925 Ga0496122_0014126 Ga0496122_0014126_5510_6952 466
37 3300048926 Ga0496123_0017252 Ga0496123_0017252_1117_2559 466
38 iso_pu_bacteria 2916971899 2916972305 467
39 3300049586 Ga0501070_0000107 Ga0501070_0000107_54047_55507 469
40 3300005456 Ga0070678_100000665 Ga0070678_10000066515 470
41 3300005547 Ga0070693_100038195 Ga0070693_1000381953 470
42 3300005548 Ga0070665_100032608 Ga0070665_1000326085 470
43 3300005718 Ga0068866_10033376 Ga0068866_100333762 470
44 3300005842 Ga0068858_100026195 Ga0068858_1000261954 470
45 3300006881 Ga0068865_100046291 Ga0068865_1000462912 470
46 3300009174 Ga0105241_10013846 Ga0105241_100138465 470
47 3300009176 Ga0105242_10004254 Ga0105242_100042545 470
48 3300009177 Ga0105248_10029833 Ga0105248_100298336 470
49 3300025900 Ga0207710_10017737 Ga0207710_100177373 470
50 3300025934 Ga0207686_10177680 Ga0207686_101776801 470
51 3300025935 Ga0207709_10038825 Ga0207709_100388253 470
52 3300025939 Ga0207665_10119130 Ga0207665_101191302 470
53 3300025941 Ga0207711_10160700 Ga0207711_101607001 470
54 3300025942 Ga0207689_10130571 Ga0207689_101305712 470
55 3300026067 Ga0207678_10042474 Ga0207678_100424742 470
56 3300026121 Ga0207683_10001171 Ga0207683_1000117114 470
57 3300028577 Ga0265318_10017270 Ga0265318_100172701 470
58 3300046459 Ga0495629_0035529 Ga0495629_0035529_1959_3425 470
59 3300048903 Ga0496100_0005715 Ga0496100_0005715_4349_5812 470
60 3300048905 Ga0496102_0012444 Ga0496102_0012444_3585_5048 470
61 3300048906 Ga0496103_0004413 Ga0496103_0004413_4087_5550 470
62 3300048907 Ga0496104_0006517 Ga0496104_0006517_1383_2846 470
63 3300048908 Ga0496105_0004210 Ga0496105_0004210_2663_4126 470
64 3300048909 Ga0496106_0007880 Ga0496106_0007880_241_1704 470
65 3300048910 Ga0496107_0009085 Ga0496107_0009085_2287_3750 470
66 3300048917 Ga0496114_0001642 Ga0496114_0001642_6112_7575 470
67 iso_pu_bacteria 2841911363 2841911739 470
68 iso_pu_bacteria 2841917233 2841917304 470
69 3300005536 Ga0070697_100113088 Ga0070697_1001130882 471
70 3300005614 Ga0068856_100015363 Ga0068856_1000153637 471
71 3300005937 Ga0081455_10024968 Ga0081455_100249684 471
72 3300006195 Ga0075366_10000459 Ga0075366_100004595 471
73 3300009148 Ga0105243_10162407 Ga0105243_101624072 471
74 3300025915 Ga0207693_10090486 Ga0207693_100904862 471
75 3300025935 Ga0207709_10018704 Ga0207709_100187043 471
76 3300044694 Ga0466963_0003460 Ga0466963_0003460_3434_4900 471
77 3300045836 Ga0466958_0030924 Ga0466958_0030924_37_1512 471
78 3300046516 Ga0495628_0177553 Ga0495628_0177553_46_1521 471
79 3300046615 Ga0495656_0007863 Ga0495656_0007863_1212_2681 471
80 3300046675 Ga0495657_0085434 Ga0495657_0085434_328_1797 471
81 3300047322 Ga0495680_0106542 Ga0495680_0106542_599_2068 471
82 3300048907 Ga0496104_0010499 Ga0496104_0010499_6586_8052 471
83 3300048907 Ga0496104_0090388 Ga0496104_0090388_944_2413 471
84 3300048908 Ga0496105_0021457 Ga0496105_0021457_1026_2495 471
85 3300048911 Ga0496108_0020188 Ga0496108_0020188_1176_2645 471
86 3300048911 Ga0496108_0038008 Ga0496108_0038008_295_1764 471
87 3300048912 Ga0496109_0008782 Ga0496109_0008782_4527_5996 471
88 3300048912 Ga0496109_0021084 Ga0496109_0021084_3539_5008 471
89 3300048913 Ga0496110_0003538 Ga0496110_0003538_2280_3749 471
90 3300048913 Ga0496110_0142813 Ga0496110_0142813_509_1975 471
91 3300048914 Ga0496111_0003964 Ga0496111_0003964_3857_5326 471
92 3300048917 Ga0496114_0012907 Ga0496114_0012907_4572_6041 471
93 3300048917 Ga0496114_0089887 Ga0496114_0089887_808_2274 471
94 3300048917 Ga0496114_0101163 Ga0496114_0101163_373_1842 471
95 3300048918 Ga0496115_0028551 Ga0496115_0028551_2190_3659 471
96 3300049571 Ga0501034_0021905 Ga0501034_0021905_204_1667 471
97 3300049588 Ga0501072_0029560 Ga0501072_0029560_17_1483 471
98 3300049741 Ga0501079_0010954 Ga0501079_0010954_4341_5807 471
99 3300050493 nmdc:mga0k408_407_c2 nmdc:mga0k408_407_c2_6201_7670 471
100 3300053084 Ga0495595_0015540 Ga0495595_0015540_886_2361 471
101 iso_pu_bacteria 2521172590 2521559878 471
102 iso_pu_bacteria 2551306416 2553006987 471
103 iso_pu_bacteria 2582581306 2585268734 471
104 iso_pu_bacteria 2582581865 2585389379 471
105 iso_pu_bacteria 2643221591 2643963727 471
106 iso_pu_bacteria 2808606415 2809129784 471
107 iso_pu_bacteria 2808606419 2809149161 471
108 iso_pu_bacteria 2852618963 2852619301 471
109 iso_pu_bacteria 2891373044 2891375631 471
110 iso_pu_bacteria 2904439833 2904444447 471
111 iso_pu_bacteria 2904530477 2904535600 471
112 iso_pu_bacteria 2904584206 2904588172 471
113 iso_pu_bacteria 2904589729 2904595208 471
114 iso_pu_bacteria 2904601388 2904606119 471
115 iso_pu_bacteria 2919079590 2919084318 471
116 iso_pu_bacteria 2923510766 2923513648 471
117 iso_pu_bacteria 2928130867 2928135236 471
118 iso_pu_bacteria 2989349275 2989350378 471
119 3300027543 Ga0209999_1000057 Ga0209999_10000575 472
120 3300027665 Ga0209983_1003498 Ga0209983_10034981 472
121 3300037853 Ga0436364_0805935 Ga0436364_0805935_47_1504 472
122 3300050507 nmdc:mga05p37_293498_c1 nmdc:mga05p37_293498_c1_447_1910 472
123 3300025942 Ga0207689_10099104 Ga0207689_100991042 473
124 3300039437 Ga0436365_0847198 Ga0436365_0847198_2566_4023 473
125 3300039447 Ga0436361_0579205 Ga0436361_0579205_3181_4635 473
126 3300039453 Ga0436362_0230902 Ga0436362_0230902_5428_6882 473
127 3300044712 Ga0453684_0001479 Ga0453684_0001479_29400_30914 473
128 3300048907 Ga0496104_0033809 Ga0496104_0033809_1976_3415 473
129 3300048908 Ga0496105_0005169 Ga0496105_0005169_4121_5560 473
130 3300048911 Ga0496108_0050848 Ga0496108_0050848_787_2226 473
131 3300048912 Ga0496109_0060528 Ga0496109_0060528_1229_2668 473
132 3300048913 Ga0496110_0065701 Ga0496110_0065701_1383_2822 473
133 3300048918 Ga0496115_0090434 Ga0496115_0090434_702_2141 473
134 3300048925 Ga0496122_0001688 Ga0496122_0001688_8544_9980 473
135 3300048926 Ga0496123_0002197 Ga0496123_0002197_3827_5263 473
136 iso_pu_bacteria 2687453257 2688069225 473
137 3300039062 Ga0400483_109998 Ga0400483_109998_8485_9921 474
138 3300039062 Ga0400483_120106 Ga0400483_120106_4404_5840 474
139 3300039062 Ga0400483_251912 Ga0400483_251912_1719_3155 474
140 3300039062 Ga0400483_287339 Ga0400483_287339_2364_3800 474
141 3300049579 Ga0501043_0109546 Ga0501043_0109546_412_1848 474
142 3300049585 Ga0501069_0034019 Ga0501069_0034019_842_2278 474
143 3300049586 Ga0501070_0001452 Ga0501070_0001452_12092_13528 474
144 3300049822 Ga0501035_0011888 Ga0501035_0011888_775_2211 474
145 3300049823 Ga0501044_0027795 Ga0501044_0027795_1070_2506 474
146 3300054114 Ga0501084_0010405 Ga0501084_0010405_3728_5167 474
147 iso_pu_bacteria 2920107658 2920108529 474
148 2162886007 SwRhRL2b_contig_84769 SwRhRL2b_0995.00006260 475
149 3300003323 rootH1_10095056 rootH1_100950561 475
150 3300005289 Ga0065704_10070242 Ga0065704_1007024231 475
151 3300005563 Ga0068855_100000165 Ga0068855_10000016522 475
152 3300005563 Ga0068855_100211783 Ga0068855_1002117832 475
153 3300006028 Ga0070717_10010197 Ga0070717_100101973 475
154 3300006844 Ga0075428_100013684 Ga0075428_1000136842 475
155 3300006847 Ga0075431_100001645 Ga0075431_10000164520 475
156 3300006880 Ga0075429_100008179 Ga0075429_1000081792 475
157 3300009147 Ga0114129_10002004 Ga0114129_1000200418 475
158 3300013297 Ga0157378_10007396 Ga0157378_100073968 475
159 3300025949 Ga0207667_10000102 Ga0207667_1000010225 475
160 3300025949 Ga0207667_10175383 Ga0207667_101753831 475
161 3300031250 Ga0265331_10014992 Ga0265331_100149923 475
162 3300031456 Ga0307513_10139250 Ga0307513_101392502 475
163 3300031456 Ga0307513_10187785 Ga0307513_101877852 475
164 3300037312 Ga0395899_0013265 Ga0395899_0013265_2977_4413 475
165 3300042530 Ga0450916_001875 Ga0450916_001875_659_2098 475
166 3300046453 Ga0495627_005131 Ga0495627_005131_3627_5063 475
167 3300046460 Ga0495638_0045305 Ga0495638_0045305_172_1623 475
168 3300046557 Ga0495622_0005967 Ga0495622_0005967_3441_4877 475
169 3300046660 Ga0495625_0027653 Ga0495625_0027653_2051_3487 475
170 3300047317 Ga0495604_0038770 Ga0495604_0038770_1306_2778 475
171 3300048913 Ga0496110_0078664 Ga0496110_0078664_753_2216 475
172 3300048924 Ga0496121_0028816 Ga0496121_0028816_1732_3174 475
173 3300048924 Ga0496121_0167866 Ga0496121_0167866_68_1546 475
174 3300048925 Ga0496122_0002724 Ga0496122_0002724_14964_16424 475
175 3300048928 Ga0496125_0004247 Ga0496125_0004247_12173_13612 475
176 3300048929 Ga0496126_0081750 Ga0496126_0081750_313_1752 475
177 3300049574 Ga0501038_0078783 Ga0501038_0078783_686_2152 475
178 3300049574 Ga0501038_0093861 Ga0501038_0093861_897_2336 475
179 3300049579 Ga0501043_0039700 Ga0501043_0039700_1376_2812 475
180 3300049581 Ga0501047_0090976 Ga0501047_0090976_1176_2618 475
181 3300049586 Ga0501070_0017911 Ga0501070_0017911_818_2254 475
182 3300049587 Ga0501071_0020689 Ga0501071_0020689_1816_3255 475
183 3300049587 Ga0501071_0057676 Ga0501071_0057676_369_1832 475
184 3300049588 Ga0501072_0004823 Ga0501072_0004823_4417_5856 475
185 3300049590 Ga0501074_0062913 Ga0501074_0062913_1122_2561 475
186 3300049591 Ga0501075_0003923 Ga0501075_0003923_5041_6480 475
187 3300049592 Ga0501076_0003434 Ga0501076_0003434_5427_6866 475
188 3300049593 Ga0501077_0004543 Ga0501077_0004543_2314_3753 475
189 3300049741 Ga0501079_0003162 Ga0501079_0003162_5639_7078 475
190 3300049742 Ga0501080_0022915 Ga0501080_0022915_4114_5553 475
191 3300049742 Ga0501080_0137217 Ga0501080_0137217_72_1514 475
192 3300049744 Ga0501083_0059055 Ga0501083_0059055_687_2129 475
193 3300049822 Ga0501035_0025156 Ga0501035_0025156_2528_3964 475
194 3300049823 Ga0501044_0047679 Ga0501044_0047679_393_1829 475
195 3300049824 Ga0501045_0002816 Ga0501045_0002816_4340_5779 475
196 3300050507 nmdc:mga05p37_226950_c1 nmdc:mga05p37_226950_c1_407_1912 475
197 3300050510 nmdc:mga06r32_41506_c1 nmdc:mga06r32_41506_c1_243_1841 475
198 3300053084 Ga0495595_0029127 Ga0495595_0029127_183_1655 475
199 3300053085 Ga0495619_0003207 Ga0495619_0003207_7118_8590 475
200 3300053087 Ga0500643_000006 Ga0500643_000006_371801_373306 475
201 3300053093 Ga0500651_0000717 Ga0500651_0000717_8579_10021 475
202 3300060353 Ga0501082_0004076 Ga0501082_0004076_7285_8724 475
203 iso_pu_bacteria 2671180531 2673165308 475
204 iso_pu_bacteria 2864997549 2865001732 475
205 iso_pu_bacteria 2870068957 2870075758 475
206 iso_pu_bacteria 2889415604 2889418535 475
207 iso_pu_bacteria 3006973921 3006974083 475
208 iso_pu_bacteria 3006978542 3006979563 475
209 iso_pu_bacteria 8020945358 8020951104 475

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00171

Aldedh

Aldehyde dehydrogenase family

66

527

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
5x5t-assembly1.cif.gz_A crystal structure of alpha-ketoglutarate semialdehyde dehydrogenase (kgsadh) from azospirillum brasilense 0.981 2 474
8c54-assembly1.cif.gz_D cryo-em structure of nadh bound sla dehydrogenase rlgabd from rhizobium leguminosarum bv. trifolii srd1565 0.9769 6 475
3ek1-assembly2.cif.gz_G crystal structure of aldehyde dehydrogenase from brucella melitensis biovar abortus 2308 0.9763 5 475
6bpg-assembly1.cif.gz_B crystal structure of betaine aldehyde dehydrogenase from pseudomonas aeruginosa with bound rubidium ions 0.9762 2 474
3jz4-assembly1.cif.gz_B crystal structure of e. coli nadp dependent enzyme 0.9761 6 475
ID Description Score Start End Superfamily
5vbfG02 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9855 252 439 3.40.309.10
af_Q9UTM8_272_454_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9804 258 438 3.40.309.10
af_A4IDE7_13_506_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.98 5 474 3.40.605.10
af_Q9VBP6_28_503_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9777 6 474 3.40.605.10
af_A4IDE7_286_468_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9777 255 435 3.40.309.10
ID Description Score Start End GO Terms
AF-A0A258IKN8-F1-model_v4 Aldehyde dehydrogenase domain-containing protein 0.9952 2 475 GO:0016620
AF-A0A258IKN8-F1-model_v4 Aldehyde dehydrogenase domain-containing protein 0.9931 2 475 GO:0016620
AF-A0A4R3WVZ6-F1-model_v4 Aldehyde dehydrogenase family protein 0.9929 220 386 GO:0004777
GO:0009450
AF-A0A7C7PZW7-F1-model_v4 NAD-dependent succinate-semialdehyde dehydrogenase 0.9859 8 474 GO:0016620
AF-A0A7T8M5K7-F1-model_v4 deleted 0.9847 1 474

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pLDDT pTM Quality
96.51 0.93 High
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Predicted Structure (AlphaFold2)

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