F318612

General Info

Members Datasets Scaffolds Average Seq Length
209 80 418 229

Family's Representative Sequence

Representative Sequence 3300005289|Ga0065704_10000357|Ga0065704_1000035750
Length 262
Sequence VSTLVNPLAKRALKIHERLLEFYGEPIWRNPLPAIDELVSTILSQNTNDLNRDRAFNSLRAKFGTWEEVRDAEAAEVVNAIRPAGLANQKGPRIQQVLRSITEERGNLDLSFLGELPVDEARAWLTKFNGVGPKTAAIVLCFSLGKPAFPVDTHIYRVTGRIGLRPERMTVEQAHPHLESLFPPETYYAAHLNIIRLGREICTARKPYCEKCPIIKLCDYGMNVMALRAAEGSQATPEPGATVPSQIRRLPRRRKNTEGSQH

Samples

Sample ID Description Type Environment
1 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
2 2162886006 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v1 Metagenome Rhizosphere
3 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
9 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
10 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
11 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
15 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
16 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
17 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
20 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
21 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
22 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
23 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
28 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
34 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
35 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
36 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
37 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
48 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
49 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
50 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
51 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
52 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
53 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
54 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
55 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
56 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
57 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
58 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
59 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
60 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
61 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
62 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
63 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
64 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
65 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
66 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
67 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
68 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
69 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
70 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
71 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
72 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
73 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
74 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
75 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
76 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
77 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
78 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
79 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
80 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 100
Stem 0
Stem Tuber 0
Unclassified 32.06

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065704_10000357 3300005289 Bacteria 43726
2 SwRhRL3b_contig_1971493 2162886006 Bacteria 1638
3 SwRhRL3b_contig_2448986 2162886006 Unclassified 1032
4 SwRhRL3b_contig_3785799 2162886006 Bacteria 1676
5 SwRhRL2b_contig_2432685 2162886007 Unclassified 1218
6 JGI25406J46586_10001506 3300003203 Bacteria 10996
7 Ga0065704_10086743 3300005289 Bacteria 3088
8 Ga0065704_10088345 3300005289 Unclassified 2929
9 Ga0065715_10190042 3300005293 Bacteria 1421
10 Ga0065707_10082630 3300005295 Bacteria 13167
11 Ga0065707_10085060 3300005295 Bacteria 6499
12 Ga0065707_10088660 3300005295 Bacteria 4589
13 Ga0065707_10089717 3300005295 Unclassified 4286
14 Ga0065707_10093665 3300005295 Unclassified 3595
15 Ga0070689_100027479 3300005340 Unclassified 4290
16 Ga0070688_100113251 3300005365 Viruses 1807
17 Ga0070705_100298124 3300005440 Bacteria 1154
18 Ga0070700_100091711 3300005441 Bacteria 1984
19 Ga0070694_100230893 3300005444 Bacteria 1392
20 Ga0070698_100085283 3300005471 Unclassified 3146
21 Ga0070698_100126431 3300005471 Bacteria 2513
22 Ga0070698_100244248 3300005471 Unclassified 1728
23 Ga0070698_100349363 3300005471 Unclassified 1410
24 Ga0070698_100405374 3300005471 Unclassified 1297
25 Ga0070699_100002175 3300005518 Bacteria 17747
26 Ga0070699_100234197 3300005518 Bacteria 1638
27 Ga0070699_100579613 3300005518 Unclassified 1022
28 Ga0070697_100296351 3300005536 Unclassified 1390
29 Ga0070695_100110190 3300005545 Bacteria 1867
30 Ga0070696_100228620 3300005546 Bacteria 1399
31 Ga0070696_100260133 3300005546 Unclassified 1316
32 Ga0070696_100580020 3300005546 Unclassified 902
33 Ga0070704_100017026 3300005549 Bacteria 4610
34 Ga0070704_100138891 3300005549 Unclassified 1895
35 Ga0070704_100278842 3300005549 Bacteria 1384
36 Ga0068857_100090717 3300005577 Bacteria 2734
37 Ga0068859_100094671 3300005617 Unclassified 3039
38 Ga0068859_100440170 3300005617 Bacteria 1400
39 Ga0068858_100664451 3300005842 Unclassified 1013
40 Ga0068862_100038171 3300005844 Bacteria 4073
41 Ga0068862_100785774 3300005844 Unclassified 929
42 Ga0081539_10000859 3300005985 Bacteria 58193
43 Ga0075427_10000696 3300006194 Bacteria 4022
44 Ga0075428_100016569 3300006844 Bacteria 8137
45 Ga0075428_100044230 3300006844 Unclassified 4894
46 Ga0075428_100124329 3300006844 Bacteria 2808
47 Ga0075428_100279888 3300006844 Bacteria 1795
48 Ga0075430_100196483 3300006846 Unclassified 1676
49 Ga0075430_100410268 3300006846 Bacteria 1118
50 Ga0075431_100068517 3300006847 Bacteria 3662
51 Ga0075431_100084865 3300006847 Bacteria 3269
52 Ga0075433_10030531 3300006852 Unclassified 4599
53 Ga0075434_100371777 3300006871 Bacteria 1450
54 Ga0075429_100066215 3300006880 Bacteria 3145
55 Ga0075429_100069322 3300006880 Bacteria 3071
56 Ga0075429_100112931 3300006880 Bacteria 2374
57 Ga0075429_100136911 3300006880 Bacteria 2143
58 Ga0097620_100094670 3300006931 Unclassified 3039
59 Ga0097620_100440150 3300006931 Bacteria 1400
60 Ga0111539_10062271 3300009094 Bacteria 4417
61 Ga0111539_11025091 3300009094 Bacteria 959
62 Ga0114129_10075232 3300009147 Unclassified 4702
63 Ga0114129_10184454 3300009147 Unclassified 2837
64 Ga0114129_10202959 3300009147 Unclassified 2684
65 Ga0114129_10943697 3300009147 Bacteria 1090
66 Ga0105243_10273125 3300009148 Bacteria 1519
67 Ga0105249_10090011 3300009553 Bacteria 2869
68 Ga0105249_10280225 3300009553 Bacteria 1664
69 Ga0105239_10804268 3300010375 Unclassified 1077
70 Ga0157380_11258407 3300014326 Unclassified 786
71 Ga0207684_10276453 3300025910 Bacteria 1449
72 Ga0207646_10062393 3300025922 Unclassified 3327
73 Ga0207709_10322360 3300025935 Unclassified 1157
74 Ga0207670_10036963 3300025936 Bacteria 3180
75 Ga0207670_10650766 3300025936 Unclassified 869
76 Ga0207708_10019191 3300026075 Bacteria 5150
77 Ga0207676_10410402 3300026095 Unclassified 1268
78 Ga0207674_10501614 3300026116 Bacteria 1173
79 Ga0207675_100358222 3300026118 Unclassified 1431
80 Ga0268265_10957163 3300028380 Bacteria 844
81 Ga0268264_10731889 3300028381 Unclassified 984
82 Ga0265334_10027887 3300028573 Unclassified 2272
83 Ga0265320_10008504 3300031240 Bacteria 6278
84 Ga0265320_10028832 3300031240 Unclassified 2878
85 Ga0265340_10058220 3300031247 Unclassified 1855
86 Ga0265331_10043250 3300031250 Unclassified 2182
87 Ga0265327_10103575 3300031251 Unclassified 1369
88 Ga0265316_10056246 3300031344 Unclassified 3074
89 Ga0316575_10102243 3300031665 Bacteria 1166
90 Ga0316576_10106970 3300031727 Bacteria 2095
91 Ga0307413_10332843 3300031824 Bacteria 1165
92 Ga0307413_10364571 3300031824 Bacteria 1120
93 Ga0307409_100456169 3300031995 Bacteria 1235
94 Ga0307416_100480203 3300032002 Bacteria 1303
95 Ga0316582_0040826 3300036647 Bacteria 2898
96 Ga0316584_0007867 3300036712 Bacteria 7315
97 Ga0316584_0067196 3300036712 Bacteria 2687
98 Ga0316584_0164717 3300036712 Unclassified 1646
99 Ga0316581_0005399 3300037588 Bacteria 3325
100 Ga0316581_0047543 3300037588 Bacteria 1313
101 Ga0451577_0002183 3300042876 Bacteria 23866
102 Ga0451577_0002353 3300042876 Bacteria 22733
103 Ga0451577_0018753 3300042876 Bacteria 6366
104 Ga0451577_0034435 3300042876 Bacteria 4564
105 Ga0451577_0059169 3300042876 Unclassified 3417
106 Ga0451577_0061474 3300042876 Bacteria 3350
107 Ga0451577_0098343 3300042876 Bacteria 2613
108 Ga0451577_0124263 3300042876 Bacteria 2312
109 Ga0451577_0138476 3300042876 Bacteria 2186
110 Ga0451577_0184693 3300042876 Bacteria 1880
111 Ga0451577_0217801 3300042876 Bacteria 1725
112 Ga0451577_0566951 3300042876 Bacteria 1031
113 Ga0453683_0005440 3300044673 Bacteria 8886
114 Ga0453683_0009842 3300044673 Bacteria 6370
115 Ga0453683_0055998 3300044673 Unclassified 2467
116 Ga0453683_0129541 3300044673 Bacteria 1589
117 Ga0453684_0000128 3300044712 Bacteria 335864
118 Ga0453684_0000214 3300044712 Bacteria 251406
119 Ga0453684_0000269 3300044712 Bacteria 223826
120 Ga0453684_0000670 3300044712 Bacteria 122645
121 Ga0453684_0001846 3300044712 Bacteria 55264
122 Ga0453684_0002815 3300044712 Bacteria 41104
123 Ga0453684_0004230 3300044712 Bacteria 30749
124 Ga0453684_0004564 3300044712 Bacteria 28954
125 Ga0453684_0011456 3300044712 Bacteria 14868
126 Ga0453684_0017459 3300044712 Bacteria 11114
127 Ga0453684_0018634 3300044712 Bacteria 10639
128 Ga0453684_0020871 3300044712 Bacteria 9834
129 Ga0453684_0023782 3300044712 Bacteria 8998
130 Ga0453684_0030426 3300044712 Bacteria 7628
131 Ga0453684_0057695 3300044712 Bacteria 5022
132 Ga0453684_0081075 3300044712 Bacteria 4048
133 Ga0453684_0096427 3300044712 Bacteria 3633
134 Ga0453684_0099208 3300044712 Unclassified 3568
135 Ga0453684_0101974 3300044712 Unclassified 3510
136 Ga0453684_0114373 3300044712 Unclassified 3271
137 Ga0453684_0138856 3300044712 Bacteria 2906
138 Ga0453684_0163453 3300044712 Unclassified 2630
139 Ga0453684_0166587 3300044712 Unclassified 2601
140 Ga0453684_0174371 3300044712 Bacteria 2531
141 Ga0453684_0206743 3300044712 Unclassified 2284
142 Ga0453684_0221846 3300044712 Bacteria 2189
143 Ga0453684_0238397 3300044712 Bacteria 2095
144 Ga0453684_0258278 3300044712 Bacteria 1997
145 Ga0453684_0302090 3300044712 Bacteria 1819
146 Ga0453684_0319028 3300044712 Unclassified 1761
147 Ga0453684_0321183 3300044712 Bacteria 1753
148 Ga0453684_0321511 3300044712 Bacteria 1752
149 Ga0453684_0342410 3300044712 Unclassified 1688
150 Ga0453684_0363232 3300044712 Bacteria 1629
151 Ga0453684_0404534 3300044712 Bacteria 1528
152 Ga0453684_0411713 3300044712 Bacteria 1512
153 Ga0453684_0443218 3300044712 Bacteria 1447
154 Ga0453684_0451981 3300044712 Bacteria 1430
155 Ga0453684_0644882 3300044712 Bacteria 1156
156 Ga0453684_0687918 3300044712 Unclassified 1112
157 Ga0453684_0727280 3300044712 Bacteria 1076
158 Ga0453684_0737522 3300044712 Bacteria 1067
159 Ga0453684_0744976 3300044712 Unclassified 1061
160 Ga0453684_0863709 3300044712 Bacteria 971
161 Ga0453684_0865301 3300044712 Bacteria 970
162 Ga0453684_0868474 3300044712 Bacteria 968
163 Ga0453684_0874938 3300044712 Unclassified 964
164 Ga0453684_1118819 3300044712 Unclassified 831
165 Ga0451576_0000187 3300045051 Bacteria 155783
166 Ga0451576_0003444 3300045051 Bacteria 21718
167 Ga0451576_0005844 3300045051 Bacteria 15281
168 Ga0451576_0041090 3300045051 Unclassified 4890
169 Ga0451576_0068214 3300045051 Bacteria 3701
170 Ga0451576_0069849 3300045051 Bacteria 3655
171 Ga0451576_0080128 3300045051 Bacteria 3398
172 Ga0451576_0091017 3300045051 Unclassified 3173
173 Ga0451576_0172383 3300045051 Bacteria 2258
174 Ga0451576_0245680 3300045051 Bacteria 1870
175 Ga0451576_0278701 3300045051 Bacteria 1748
176 Ga0451576_0519779 3300045051 Unclassified 1251
177 Ga0501038_0264256 3300049574 Bacteria 1359
178 Ga0501043_0478439 3300049579 Bacteria 933
179 Ga0501068_0213301 3300049584 Bacteria 1226
180 Ga0501073_0046877 3300049589 Bacteria 3039
181 Ga0501073_0052676 3300049589 Bacteria 2849
182 Ga0501073_0094063 3300049589 Bacteria 2082
183 Ga0501073_0114166 3300049589 Unclassified 1873
184 Ga0501073_0128223 3300049589 Unclassified 1759
185 Ga0501076_0204614 3300049592 Unclassified 1612
186 Ga0501079_0251882 3300049741 Bacteria 1380
187 Ga0501080_0005556 3300049742 Bacteria 11262
188 Ga0501080_0067355 3300049742 Bacteria 3330
189 Ga0501081_0022594 3300049743 Bacteria 4210
190 nmdc:mga05p37_376837_c1 3300050507 Unclassified 1664
191 nmdc:mga05p37_39042_c1 3300050507 Bacteria 5825
192 nmdc:mga05p37_60177_c1 3300050507 Bacteria 4677
193 nmdc:mga05p37_737814_c1 3300050507 Bacteria 1088
194 nmdc:mga05p37_92036_c1 3300050507 Bacteria 3737
195 nmdc:mga09592_16839_c1 3300050508 Bacteria 5982
196 nmdc:mga09592_201287_c1 3300050508 Bacteria 1725
197 nmdc:mga09592_241291_c1 3300050508 Unclassified 1566
198 nmdc:mga09592_734164_c1 3300050508 Unclassified 839
199 nmdc:mga0qj67_98313_c1 3300050509 Unclassified 2357
200 nmdc:mga06r32_134897_c1 3300050510 Bacteria 2443
201 nmdc:mga06r32_1823_c2 3300050510 Bacteria 10423
202 nmdc:mga06r32_74093_c1 3300050510 Unclassified 3299
203 nmdc:mga0a205_114122_c1 3300050515 Unclassified 2600
204 Ga0501084_0000183 3300054114 Bacteria 48760
205 Ga0501082_0028326 3300060353 Bacteria 4827
206 Ga0501082_0626766 3300060353 Bacteria 941
207 Ga0501082_0650196 3300060353 Bacteria 923
208 Ga0530510_0049180 3300061734 Bacteria 3047
209 Ga0530510_0482418 3300061734 Unclassified 939
210 Ga0065704_10000357
211 SwRhRL3b_contig_1971493
212 SwRhRL3b_contig_2448986
213 SwRhRL3b_contig_3785799
214 SwRhRL2b_contig_2432685
215 JGI25406J46586_10001506
216 Ga0065704_10086743
217 Ga0065704_10088345
218 Ga0065715_10190042
219 Ga0065707_10082630
220 Ga0065707_10085060
221 Ga0065707_10088660
222 Ga0065707_10089717
223 Ga0065707_10093665
224 Ga0070689_100027479
225 Ga0070688_100113251
226 Ga0070705_100298124
227 Ga0070700_100091711
228 Ga0070694_100230893
229 Ga0070698_100085283
230 Ga0070698_100126431
231 Ga0070698_100244248
232 Ga0070698_100349363
233 Ga0070698_100405374
234 Ga0070699_100002175
235 Ga0070699_100234197
236 Ga0070699_100579613
237 Ga0070697_100296351
238 Ga0070695_100110190
239 Ga0070696_100228620
240 Ga0070696_100260133
241 Ga0070696_100580020
242 Ga0070704_100017026
243 Ga0070704_100138891
244 Ga0070704_100278842
245 Ga0068857_100090717
246 Ga0068859_100094671
247 Ga0068859_100440170
248 Ga0068858_100664451
249 Ga0068862_100038171
250 Ga0068862_100785774
251 Ga0081539_10000859
252 Ga0075427_10000696
253 Ga0075428_100016569
254 Ga0075428_100044230
255 Ga0075428_100124329
256 Ga0075428_100279888
257 Ga0075430_100196483
258 Ga0075430_100410268
259 Ga0075431_100068517
260 Ga0075431_100084865
261 Ga0075433_10030531
262 Ga0075434_100371777
263 Ga0075429_100066215
264 Ga0075429_100069322
265 Ga0075429_100112931
266 Ga0075429_100136911
267 Ga0097620_100094670
268 Ga0097620_100440150
269 Ga0111539_10062271
270 Ga0111539_11025091
271 Ga0114129_10075232
272 Ga0114129_10184454
273 Ga0114129_10202959
274 Ga0114129_10943697
275 Ga0105243_10273125
276 Ga0105249_10090011
277 Ga0105249_10280225
278 Ga0105239_10804268
279 Ga0157380_11258407
280 Ga0207684_10276453
281 Ga0207646_10062393
282 Ga0207709_10322360
283 Ga0207670_10036963
284 Ga0207670_10650766
285 Ga0207708_10019191
286 Ga0207676_10410402
287 Ga0207674_10501614
288 Ga0207675_100358222
289 Ga0268265_10957163
290 Ga0268264_10731889
291 Ga0265334_10027887
292 Ga0265320_10008504
293 Ga0265320_10028832
294 Ga0265340_10058220
295 Ga0265331_10043250
296 Ga0265327_10103575
297 Ga0265316_10056246
298 Ga0316575_10102243
299 Ga0316576_10106970
300 Ga0307413_10332843
301 Ga0307413_10364571
302 Ga0307409_100456169
303 Ga0307416_100480203
304 Ga0316582_0040826
305 Ga0316584_0007867
306 Ga0316584_0067196
307 Ga0316584_0164717
308 Ga0316581_0005399
309 Ga0316581_0047543
310 Ga0451577_0002183
311 Ga0451577_0002353
312 Ga0451577_0018753
313 Ga0451577_0034435
314 Ga0451577_0059169
315 Ga0451577_0061474
316 Ga0451577_0098343
317 Ga0451577_0124263
318 Ga0451577_0138476
319 Ga0451577_0184693
320 Ga0451577_0217801
321 Ga0451577_0566951
322 Ga0453683_0005440
323 Ga0453683_0009842
324 Ga0453683_0055998
325 Ga0453683_0129541
326 Ga0453684_0000128
327 Ga0453684_0000214
328 Ga0453684_0000269
329 Ga0453684_0000670
330 Ga0453684_0001846
331 Ga0453684_0002815
332 Ga0453684_0004230
333 Ga0453684_0004564
334 Ga0453684_0011456
335 Ga0453684_0017459
336 Ga0453684_0018634
337 Ga0453684_0020871
338 Ga0453684_0023782
339 Ga0453684_0030426
340 Ga0453684_0057695
341 Ga0453684_0081075
342 Ga0453684_0096427
343 Ga0453684_0099208
344 Ga0453684_0101974
345 Ga0453684_0114373
346 Ga0453684_0138856
347 Ga0453684_0163453
348 Ga0453684_0166587
349 Ga0453684_0174371
350 Ga0453684_0206743
351 Ga0453684_0221846
352 Ga0453684_0238397
353 Ga0453684_0258278
354 Ga0453684_0302090
355 Ga0453684_0319028
356 Ga0453684_0321183
357 Ga0453684_0321511
358 Ga0453684_0342410
359 Ga0453684_0363232
360 Ga0453684_0404534
361 Ga0453684_0411713
362 Ga0453684_0443218
363 Ga0453684_0451981
364 Ga0453684_0644882
365 Ga0453684_0687918
366 Ga0453684_0727280
367 Ga0453684_0737522
368 Ga0453684_0744976
369 Ga0453684_0863709
370 Ga0453684_0865301
371 Ga0453684_0868474
372 Ga0453684_0874938
373 Ga0453684_1118819
374 Ga0451576_0000187
375 Ga0451576_0003444
376 Ga0451576_0005844
377 Ga0451576_0041090
378 Ga0451576_0068214
379 Ga0451576_0069849
380 Ga0451576_0080128
381 Ga0451576_0091017
382 Ga0451576_0172383
383 Ga0451576_0245680
384 Ga0451576_0278701
385 Ga0451576_0519779
386 Ga0501038_0264256
387 Ga0501043_0478439
388 Ga0501068_0213301
389 Ga0501073_0046877
390 Ga0501073_0052676
391 Ga0501073_0094063
392 Ga0501073_0114166
393 Ga0501073_0128223
394 Ga0501076_0204614
395 Ga0501079_0251882
396 Ga0501080_0005556
397 Ga0501080_0067355
398 Ga0501081_0022594
399 nmdc:mga05p37_376837_c1
400 nmdc:mga05p37_39042_c1
401 nmdc:mga05p37_60177_c1
402 nmdc:mga05p37_737814_c1
403 nmdc:mga05p37_92036_c1
404 nmdc:mga09592_16839_c1
405 nmdc:mga09592_201287_c1
406 nmdc:mga09592_241291_c1
407 nmdc:mga09592_734164_c1
408 nmdc:mga0qj67_98313_c1
409 nmdc:mga06r32_134897_c1
410 nmdc:mga06r32_1823_c2
411 nmdc:mga06r32_74093_c1
412 nmdc:mga0a205_114122_c1
413 Ga0501084_0000183
414 Ga0501082_0028326
415 Ga0501082_0626766
416 Ga0501082_0650196
417 Ga0530510_0049180
418 Ga0530510_0482418

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00730

HhH-GPD

HhH-GPD superfamily base excision DNA repair protein

39

184

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
8a5g-assembly1.cif.gz_A crystal structure of deinococcus radiodurans endonuclease iii-3 double mutant 0.9249 10 219
4uob-assembly1.cif.gz_A crystal structure of deinococcus radiodurans endonuclease iii-3 0.9106 10 224
8a5f-assembly1.cif.gz_A crystal structure of deinococcus radiodurans endonuclease iii-1 r61q variant 0.8809 4 215
8a5c-assembly1.cif.gz_A crystal structure of deinococcus radiodurans endonuclease iii-1 y100l variant 0.8744 1 215
7yho-assembly1.cif.gz_A cryoem structure of arabidopsis ros1 in complex with tg mismatch dsdna at 3.3 angstroms resolution 0.8619 6 221
ID Description Score Start End Superfamily
af_I1JZX0_85_197_1.10.340.30 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9463 31 142 1.10.340.30
af_K7MWZ4_17_115_1.10.340.30 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9361 27 124 1.10.340.30
af_I1JZX0_85_197_1.10.340.30 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9303 31 142 1.10.340.30
af_K7MWZ4_17_115_1.10.340.30 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9183 27 124 1.10.340.30
af_P0AB83_133_208_1.10.1670.10 Mainly Alpha;Orthogonal Bundle;Endonuclease Iii, domain 2;Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) 0.9107 143 216 1.10.1670.10
ID Description Score Start End GO Terms
AF-A0A3D0RRS4-F1-model_v4 HhH-GPD domain-containing protein 0.9842 105 216 GO:0006285
GO:0019104
GO:0046872
GO:0051539
AF-A0A2N2MP50-F1-model_v4 Fe-S cluster assembly protein HesB 0.9832 1 219 GO:0003824
GO:0006284
AF-A0A3N5LC53-F1-model_v4 Endonuclease III 0.9798 4 224 GO:0004519
GO:0006284
GO:0046872
GO:0051539
AF-A0A135VRW6-F1-model_v4 HhH-GPD domain-containing protein 0.9777 4 220 GO:0003824
GO:0006284
GO:0046872
GO:0051539
AF-A0A1B3WUD2-F1-model_v4 HhH-GPD domain-containing protein 0.9772 5 221 GO:0006284
GO:0016798
GO:0046872
GO:0051539

Map