F318189
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 208 | 152 | 135 | 514 |
Family's Representative Sequence
| Representative Sequence | 3300045976|Ga0466967_0003531|Ga0466967_0003531_6998_8707 |
| Length | 569 |
| Sequence | LGPTASSDVHGRAQRLSFGIGTGDQRKQIQAGPGEETMTQMDVQASRTDADLRDPVAVIRMEDISIAFGGVPALDHVSLRLFPGEVHALMGENGAGKSTLIKALTGVYSIDSGRIVVDGEEHVFSSPAASQAAGISTVYQEVNLVPNLTVAENMLLGREPRKAGGIDTRAMNRQAKATLSRLGIDIEASSLLGGHPIAIQQLVAIARAVDTECRVLILDEPTSSLDADEVKKLFEVMRHLRDQGVAIVFVSHFLDQIYEISDRMTILRNGKLVEERMVKDTPQLQLVRLMIGRELQTLENLDREAASTVKDTSELPVLTAVGLGRRGSLEATDLKLYEGEVIGIAGLLGSGRTELARLLFGADTADSGELQVRSTKRRFRSPRHAIDRKIAFTSENRRSEGVVGDLTVADNMLLALQASRGWMRPIPQSTRTRLVNEYIEALDIRPADPNAIMRNLSGGNQQKVLLARWLITQPEVLILDEPTRGIDIGAKAHIQQLVAELSSKGLSVVFISAELEEVLRLSDRLVVMRDRRKIDERPNNDISVSDVLEIIAGEGRAEADVEESEKSRA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2599185236 | Rhizobium sp. NFR07 | Isolate | Rhizoplane |
| 2 | 2643221542 | Microbacterium sp. Root1433D1 | Isolate | Unclassified |
| 3 | 2643221576 | Nocardioides sp. Root614 | Isolate | Unclassified |
| 4 | 2643221590 | Nocardioides sp. Root682 | Isolate | Unclassified |
| 5 | 2643221615 | Nocardioides sp. Root224 | Isolate | Unclassified |
| 6 | 2643221617 | Nocardioides sp. Root79 | Isolate | Unclassified |
| 7 | 2643221641 | Nocardioides sp. Root122 | Isolate | Unclassified |
| 8 | 2643221657 | Nocardioides sp. Root1257 | Isolate | Unclassified |
| 9 | 2643221681 | Aeromicrobium sp. Root472D3 | Isolate | Unclassified |
| 10 | 2643221961 | Aeromicrobium sp. Root236 | Isolate | Unclassified |
| 11 | 2643221962 | Aeromicrobium sp. Root344 | Isolate | Unclassified |
| 12 | 2684623219 | Planctomyces sp. SH-PL14 | Isolate | Unclassified |
| 13 | 2738541305 | Nocardioides sp. CF167 | Isolate | Unclassified |
| 14 | 2757320536 | Microbacterium sp. NFIX05 | Isolate | Unclassified |
| 15 | 2773857758 | Microbacterium chocolatum 1320 | Isolate | Unclassified |
| 16 | 2791354901 | Actinophytocola xanthii 11-183 | Isolate | Rhizosphere |
| 17 | 2816332139 | Pseudonocardia kunmingensis DSM 45301 | Isolate | Unclassified |
| 18 | 2816332186 | Peribacillus frigoritolerans 3612 | Isolate | Unclassified |
| 19 | 2821123053 | Rhizobium cellulosilyticum 1193 | Isolate | Unclassified |
| 20 | 2838736955 | Rhizobium cellulosilyticum SEMIA 448 | Isolate | Nodule |
| 21 | 2839986021 | Cellulosimicrobium cellulans JZ5 | Isolate | Unclassified |
| 22 | 2841840854 | Rhizobium cellulosilyticum SEMIA 444 | Isolate | Nodule |
| 23 | 2842140634 | Rhizobium cellulosilyticum SEMIA 452 | Isolate | Nodule |
| 24 | 2842682962 | Bacillus sp. R-72492 | Isolate | Unclassified |
| 25 | 2849139964 | Bacillus sp. R-71875 | Isolate | Unclassified |
| 26 | 2855386786 | Nocardioides ferulae EGI 63112 | Isolate | Unclassified |
| 27 | 2857481737 | Nocardioides sp. R-74106 | Isolate | Unclassified |
| 28 | 2857531043 | Neorhizobium sp. R-72160 | Isolate | Unclassified |
| 29 | 2857581216 | Bacillus sp. R-71922 | Isolate | Unclassified |
| 30 | 2857729791 | Plantibacter sp. R-72288 | Isolate | Unclassified |
| 31 | 2862993130 | Planctomonas deserti 13S1-3 v2 | Isolate | Rhizosphere |
| 32 | 2904509784 | Microbacterium sp. 1676 | Isolate | Rhizosphere |
| 33 | 2908678064 | Microbacterium sp. 1518 | Isolate | Rhizosphere |
| 34 | 2919055335 | Leifsonia sp. 1010 | Isolate | Rhizosphere |
| 35 | 2919069694 | Microbacterium sp. 1154 | Isolate | Unclassified |
| 36 | 2919523602 | Leifsonia shinshuensis 3821 | Isolate | Unclassified |
| 37 | 2928121344 | Plantibacter flavus 1756 | Isolate | Rhizosphere |
| 38 | 2932431166 | Cellulosimicrobium sp. 4261 | Isolate | Rhizosphere |
| 39 | 2977228692 | Microbacterium sp. SORGH_AS 421 | Isolate | Unclassified |
| 40 | 2977236895 | Microbacterium testaceum SORGH_AS 426 | Isolate | Unclassified |
| 41 | 2977264416 | Microbacterium testaceum SORGH_AS 594 | Isolate | Unclassified |
| 42 | 2984542743 | Microbacterium sp. SORGH_AS454 | Isolate | Aerial Root |
| 43 | 2984576629 | Nocardioides zeae SORGH_AS913 | Isolate | Aerial Root |
| 44 | 2984592036 | Aeromicrobium sp. SORGH_AS981 | Isolate | Aerial Root |
| 45 | 2990256926 | Nocardioides zeae SORGH_AS885 | Isolate | Aerial Root |
| 46 | 3300003752 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 | Metagenome | Endosphere |
| 47 | 3300003756 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 | Metagenome | Endosphere |
| 48 | 3300003759 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 | Metagenome | Endosphere |
| 49 | 3300003841 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 50 | 3300005288 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 51 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 52 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 53 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 54 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 55 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 56 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 57 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 58 | 3300006042 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 | Metagenome | Endosphere |
| 59 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 60 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 61 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 62 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 63 | 3300006946 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG | Metagenome | Nodule |
| 64 | 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Metagenome | Rhizosphere |
| 65 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 66 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 67 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 68 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 69 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 70 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 71 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 72 | 3300025225 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 73 | 3300025226 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 74 | 3300025230 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 75 | 3300025253 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 76 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300027111 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) | Metagenome | Nodule |
| 82 | 3300027866 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) | Metagenome | Endosphere |
| 83 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 84 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 85 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 86 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 87 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 88 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 89 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 90 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 91 | 3300041413 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 | Metagenome | Rhizosphere |
| 92 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 93 | 3300042004 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 | Metagenome | Rhizosphere |
| 94 | 3300042007 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 | Metagenome | Rhizosphere |
| 95 | 3300042014 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 | Metagenome | Rhizosphere |
| 96 | 3300042122 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 | Metagenome | Rhizosphere |
| 97 | 3300042435 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 | Metagenome | Rhizosphere |
| 98 | 3300042439 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 | Metagenome | Rhizosphere |
| 99 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 100 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 101 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 102 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 103 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 104 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 105 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 106 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 107 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 108 | 3300046457 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300048091 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 115 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 116 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 117 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 118 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 119 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 120 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 121 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 122 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 123 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 124 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 125 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 126 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 127 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 128 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 129 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 130 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 131 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 132 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 133 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 134 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 135 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 136 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 137 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 138 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 139 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 140 | 3300050495 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation | Metagenome | Endosphere |
| 141 | 3300053096 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere | Metagenome | Endosphere |
| 142 | 3300053117 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere | Metagenome | Endosphere |
| 143 | 3300053125 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere | Metagenome | Endosphere |
| 144 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 145 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 146 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 147 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 148 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 149 | 8016254467 | Microbacterium sp. SLBN-111 (version 3) | Isolate | Rhizosphere |
| 150 | 8054609563 | Nocardioides astragali CGMCC 4.7327 | Isolate | Nodule |
| 151 | 8056054917 | Glycomyces luteolus NEAU-A15 | Isolate | Rhizosphere |
| 152 | 8056060235 | Nocardiopsis endophytica RSe5-2 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 70.67 |
| Metatranscriptomes | 0 |
| Isolates | 29.33 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 2.4 |
| Bulb | 0 |
| Endosphere | 15.87 |
| Nodule | 2.88 |
| Rhizoplane | 3.85 |
| Rhizosphere | 41.83 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 33.17 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0055539_1000006 | 3300003752 | Bacteria | 580055 |
| 2 | Ga0055533_1000002 | 3300003756 | Bacteria | 1196393 |
| 3 | Ga0055525_1000022 | 3300003759 | Bacteria | 368755 |
| 4 | Ga0055541_1002090 | 3300003841 | Bacteria | 4076 |
| 5 | Ga0065714_10010519 | 3300005288 | Bacteria | 4081 |
| 6 | Ga0070668_100000179 | 3300005347 | Bacteria | 40901 |
| 7 | Ga0070671_100066729 | 3300005355 | Bacteria | 2999 |
| 8 | Ga0070659_100023792 | 3300005366 | Bacteria | 4690 |
| 9 | Ga0070667_100063769 | 3300005367 | Bacteria | 3124 |
| 10 | Ga0068855_100001513 | 3300005563 | Bacteria | 29118 |
| 11 | Ga0068855_100025512 | 3300005563 | Bacteria | 7071 |
| 12 | Ga0070664_100055565 | 3300005564 | Bacteria | 3362 |
| 13 | Ga0075365_10033636 | 3300006038 | Bacteria | 3305 |
| 14 | Ga0075368_10000868 | 3300006042 | Bacteria | 9359 |
| 15 | Ga0075363_100003806 | 3300006048 | Bacteria | 6504 |
| 16 | Ga0075364_10043477 | 3300006051 | Bacteria | 2921 |
| 17 | Ga0075367_10000524 | 3300006178 | Bacteria | 14460 |
| 18 | Ga0075367_10001140 | 3300006178 | Bacteria | 11064 |
| 19 | Ga0075370_10009820 | 3300006353 | Bacteria | 4986 |
| 20 | Ga0079104_1000103 | 3300006946 | Bacteria | 124578 |
| 21 | Ga0105244_10008079 | 3300009036 | Bacteria | 6611 |
| 22 | Ga0105241_10110401 | 3300009174 | Bacteria | 2200 |
| 23 | Ga0105238_10129631 | 3300009551 | Bacteria | 2500 |
| 24 | Ga0105239_10011708 | 3300010375 | Bacteria | 9789 |
| 25 | Ga0105239_10230836 | 3300010375 | Bacteria | 2076 |
| 26 | Ga0157370_10059837 | 3300013104 | Bacteria | 3619 |
| 27 | Ga0157369_10133209 | 3300013105 | Bacteria | 2633 |
| 28 | Ga0163163_10253677 | 3300014325 | Bacteria | 1810 |
| 29 | Ga0163161_10041361 | 3300017792 | Bacteria | 3312 |
| 30 | Ga0209566_100032 | 3300025225 | Bacteria | 338313 |
| 31 | Ga0209674_100001 | 3300025226 | Bacteria | 4013750 |
| 32 | Ga0209563_100001 | 3300025230 | Bacteria | 4013775 |
| 33 | Ga0209677_100001 | 3300025253 | Bacteria | 4013787 |
| 34 | Ga0207671_10126791 | 3300025914 | Bacteria | 1956 |
| 35 | Ga0207690_10056461 | 3300025932 | Bacteria | 2649 |
| 36 | Ga0207679_10014448 | 3300025945 | Bacteria | 5193 |
| 37 | Ga0207667_10043982 | 3300025949 | Bacteria | 4736 |
| 38 | Ga0207658_10027051 | 3300025986 | Bacteria | 4028 |
| 39 | Ga0209281_1000512 | 3300027111 | Bacteria | 50723 |
| 40 | Ga0209813_10000754 | 3300027866 | Bacteria | 7391 |
| 41 | Ga0307515_10132995 | 3300028794 | Bacteria | 2724 |
| 42 | Ga0265320_10035545 | 3300031240 | Bacteria | 2525 |
| 43 | Ga0307513_10000002 | 3300031456 | Bacteria | 842612 |
| 44 | Ga0307406_10000350 | 3300031901 | Bacteria | 26873 |
| 45 | Ga0307416_100025709 | 3300032002 | Bacteria | 4322 |
| 46 | Ga0307414_10063934 | 3300032004 | Bacteria | 2618 |
| 47 | Ga0395905_0109140 | 3300037471 | Bacteria | 2598 |
| 48 | Ga0395901_0250624 | 3300038443 | Bacteria | 1845 |
| 49 | Ga0439465_0029718 | 3300041413 | Bacteria | 1737 |
| 50 | Ga0451853_0011871 | 3300041512 | Bacteria | 6264 |
| 51 | Ga0439445_0002946 | 3300042004 | Bacteria | 3802 |
| 52 | Ga0439449_0009494 | 3300042007 | Bacteria | 3687 |
| 53 | Ga0439457_001177 | 3300042014 | Bacteria | 7862 |
| 54 | Ga0450920_002374 | 3300042122 | Bacteria | 3195 |
| 55 | Ga0439434_0001628 | 3300042435 | Bacteria | 6488 |
| 56 | Ga0439464_0001246 | 3300042439 | Bacteria | 5922 |
| 57 | Ga0466969_0023074 | 3300044656 | Bacteria | 3209 |
| 58 | Ga0466965_0000020 | 3300044683 | Bacteria | 63210 |
| 59 | Ga0466965_0007724 | 3300044683 | Bacteria | 4949 |
| 60 | Ga0466965_0016049 | 3300044683 | Bacteria | 3559 |
| 61 | Ga0466966_0023063 | 3300044684 | Bacteria | 4077 |
| 62 | Ga0466961_0012396 | 3300044693 | Bacteria | 5452 |
| 63 | Ga0466961_0015893 | 3300044693 | Bacteria | 4830 |
| 64 | Ga0466961_0058931 | 3300044693 | Bacteria | 2442 |
| 65 | Ga0466971_0020411 | 3300044719 | Bacteria | 2946 |
| 66 | Ga0466970_0007458 | 3300044765 | Bacteria | 5483 |
| 67 | Ga0466970_0022848 | 3300044765 | Bacteria | 3263 |
| 68 | Ga0466970_0052822 | 3300044765 | Bacteria | 2169 |
| 69 | Ga0466959_0021500 | 3300045049 | Bacteria | 4758 |
| 70 | Ga0466958_0025458 | 3300045836 | Bacteria | 3490 |
| 71 | Ga0466967_0003531 | 3300045976 | Bacteria | 10231 |
| 72 | Ga0495590_0000075 | 3300046457 | Bacteria | 68919 |
| 73 | Ga0495606_0008667 | 3300046507 | Bacteria | 8769 |
| 74 | Ga0495668_0000265 | 3300046616 | Bacteria | 73791 |
| 75 | Ga0495625_0001104 | 3300046660 | Bacteria | 35020 |
| 76 | Ga0495672_0001753 | 3300047320 | Bacteria | 20929 |
| 77 | Ga0495672_0029971 | 3300047320 | Bacteria | 3420 |
| 78 | Ga0495626_0000052 | 3300048091 | Bacteria | 156421 |
| 79 | Ga0496104_0123084 | 3300048907 | Bacteria | 2490 |
| 80 | Ga0496105_0067147 | 3300048908 | Bacteria | 2961 |
| 81 | Ga0496110_0009092 | 3300048913 | Bacteria | 8018 |
| 82 | Ga0496111_0008721 | 3300048914 | Bacteria | 6729 |
| 83 | Ga0496111_0036190 | 3300048914 | Bacteria | 3529 |
| 84 | Ga0496111_0134838 | 3300048914 | Bacteria | 1828 |
| 85 | Ga0496114_0027214 | 3300048917 | Bacteria | 4682 |
| 86 | Ga0496117_0000069 | 3300048920 | Bacteria | 246025 |
| 87 | Ga0496117_0000129 | 3300048920 | Bacteria | 164845 |
| 88 | Ga0496117_0015273 | 3300048920 | Bacteria | 6559 |
| 89 | Ga0496117_0084245 | 3300048920 | Bacteria | 2075 |
| 90 | Ga0496118_0033577 | 3300048921 | Bacteria | 4207 |
| 91 | Ga0496119_0006707 | 3300048922 | Bacteria | 10582 |
| 92 | Ga0496120_0002457 | 3300048923 | Bacteria | 18675 |
| 93 | Ga0496120_0028215 | 3300048923 | Bacteria | 3441 |
| 94 | Ga0496120_0029574 | 3300048923 | Bacteria | 3343 |
| 95 | Ga0496121_0036707 | 3300048924 | Bacteria | 4363 |
| 96 | Ga0496122_0046992 | 3300048925 | Bacteria | 3337 |
| 97 | Ga0496122_0049628 | 3300048925 | Bacteria | 3210 |
| 98 | Ga0496123_0003278 | 3300048926 | Bacteria | 18343 |
| 99 | Ga0496123_0011894 | 3300048926 | Bacteria | 7479 |
| 100 | Ga0496123_0101051 | 3300048926 | Bacteria | 1677 |
| 101 | Ga0496124_0003529 | 3300048927 | Bacteria | 19039 |
| 102 | Ga0496124_0020344 | 3300048927 | Bacteria | 6137 |
| 103 | Ga0496124_0075553 | 3300048927 | Bacteria | 2783 |
| 104 | Ga0496125_0000263 | 3300048928 | Bacteria | 108232 |
| 105 | Ga0496125_0002413 | 3300048928 | Bacteria | 24328 |
| 106 | Ga0496126_0013525 | 3300048929 | Bacteria | 8293 |
| 107 | Ga0496126_0135094 | 3300048929 | Bacteria | 2128 |
| 108 | Ga0496126_0189707 | 3300048929 | Bacteria | 1742 |
| 109 | Ga0501032_0013181 | 3300049569 | Bacteria | 5883 |
| 110 | Ga0501033_0011719 | 3300049570 | Bacteria | 6704 |
| 111 | Ga0501034_0002595 | 3300049571 | Bacteria | 21477 |
| 112 | Ga0501034_0004849 | 3300049571 | Bacteria | 14851 |
| 113 | Ga0501034_0014856 | 3300049571 | Bacteria | 8011 |
| 114 | Ga0501034_0019201 | 3300049571 | Bacteria | 6997 |
| 115 | Ga0501034_0034520 | 3300049571 | Bacteria | 5128 |
| 116 | Ga0501038_0016490 | 3300049574 | Bacteria | 6695 |
| 117 | Ga0501067_0034522 | 3300049583 | Bacteria | 2807 |
| 118 | Ga0501071_0085500 | 3300049587 | Bacteria | 2313 |
| 119 | Ga0501079_0111087 | 3300049741 | Bacteria | 2130 |
| 120 | Ga0501080_0134997 | 3300049742 | Bacteria | 2283 |
| 121 | Ga0501035_0010932 | 3300049822 | Bacteria | 8404 |
| 122 | nmdc:mga03n38_730_c1 | 3300050490 | Bacteria | 8674 |
| 123 | nmdc:mga06z11_3642_c1 | 3300050494 | Bacteria | 5980 |
| 124 | nmdc:mga06z11_49393_c1 | 3300050494 | Bacteria | 2146 |
| 125 | nmdc:mga04h51_2677_c1 | 3300050495 | Bacteria | 4243 |
| 126 | Ga0500641_0000812 | 3300053096 | Bacteria | 11284 |
| 127 | Ga0500593_000060 | 3300053117 | Bacteria | 40345 |
| 128 | Ga0500618_000041 | 3300053125 | Bacteria | 111404 |
| 129 | Ga0500568_0000302 | 3300053139 | Bacteria | 39908 |
| 130 | Ga0500568_0002679 | 3300053139 | Bacteria | 10328 |
| 131 | Ga0500616_0001592 | 3300053153 | Bacteria | 21163 |
| 132 | Ga0501084_0059819 | 3300054114 | Bacteria | 3190 |
| 133 | Ga0501082_0000949 | 3300060353 | Bacteria | 25635 |
| 134 | Ga0501082_0040842 | 3300060353 | Bacteria | 4000 |
| 135 | Ga0530510_0036716 | 3300061734 | Bacteria | 3531 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300047320 | Ga0495672_0001753 | Ga0495672_0001753_2503_4083 | 453 |
| 2 | 3300042122 | Ga0450920_002374 | Ga0450920_002374_335_1744 | 462 |
| 3 | 3300049587 | Ga0501071_0085500 | Ga0501071_0085500_894_2303 | 462 |
| 4 | 3300061734 | Ga0530510_0036716 | Ga0530510_0036716_2073_3482 | 462 |
| 5 | 3300048908 | Ga0496105_0067147 | Ga0496105_0067147_1504_2928 | 463 |
| 6 | 3300048914 | Ga0496111_0134838 | Ga0496111_0134838_27_1442 | 463 |
| 7 | 3300031901 | Ga0307406_10000350 | Ga0307406_1000035023 | 470 |
| 8 | 3300048929 | Ga0496126_0189707 | Ga0496126_0189707_11_1546 | 470 |
| 9 | 3300032002 | Ga0307416_100025709 | Ga0307416_1000257093 | 471 |
| 10 | 3300048928 | Ga0496125_0000263 | Ga0496125_0000263_73601_75178 | 476 |
| 11 | 3300044683 | Ga0466965_0000020 | Ga0466965_0000020_46871_48430 | 477 |
| 12 | 3300048907 | Ga0496104_0123084 | Ga0496104_0123084_614_2149 | 482 |
| 13 | 3300048913 | Ga0496110_0009092 | Ga0496110_0009092_4991_6526 | 482 |
| 14 | 3300048914 | Ga0496111_0008721 | Ga0496111_0008721_172_1707 | 482 |
| 15 | 3300041512 | Ga0451853_0011871 | Ga0451853_0011871_2144_3676 | 484 |
| 16 | iso_pu_bacteria | 2816332186 | 2816865296 | 485 |
| 17 | iso_pu_bacteria | 2842682962 | 2842687629 | 485 |
| 18 | iso_pu_bacteria | 2849139964 | 2849143045 | 485 |
| 19 | iso_pu_bacteria | 2857581216 | 2857583056 | 485 |
| 20 | 3300053153 | Ga0500616_0001592 | Ga0500616_0001592_4064_5623 | 487 |
| 21 | 3300049741 | Ga0501079_0111087 | Ga0501079_0111087_386_1882 | 491 |
| 22 | 3300054114 | Ga0501084_0059819 | Ga0501084_0059819_493_1989 | 491 |
| 23 | 3300060353 | Ga0501082_0040842 | Ga0501082_0040842_1033_2529 | 491 |
| 24 | 3300049571 | Ga0501034_0004849 | Ga0501034_0004849_9411_10910 | 492 |
| 25 | 3300049571 | Ga0501034_0014856 | Ga0501034_0014856_4446_6011 | 492 |
| 26 | 3300049571 | Ga0501034_0034520 | Ga0501034_0034520_1093_2589 | 492 |
| 27 | 3300049574 | Ga0501038_0016490 | Ga0501038_0016490_2111_3607 | 492 |
| 28 | 3300053139 | Ga0500568_0000302 | Ga0500568_0000302_28137_29678 | 492 |
| 29 | 3300060353 | Ga0501082_0000949 | Ga0501082_0000949_5267_6766 | 492 |
| 30 | 3300046457 | Ga0495590_0000075 | Ga0495590_0000075_34687_36222 | 493 |
| 31 | 3300047320 | Ga0495672_0029971 | Ga0495672_0029971_655_2190 | 493 |
| 32 | 3300049583 | Ga0501067_0034522 | Ga0501067_0034522_968_2503 | 493 |
| 33 | 3300049742 | Ga0501080_0134997 | Ga0501080_0134997_711_2246 | 493 |
| 34 | 3300053139 | Ga0500568_0002679 | Ga0500568_0002679_3763_5310 | 494 |
| 35 | 3300005355 | Ga0070671_100066729 | Ga0070671_1000667292 | 495 |
| 36 | iso_pu_bacteria | 2643221542 | 2643732750 | 495 |
| 37 | iso_pu_bacteria | 8056054917 | 8056060178 | 495 |
| 38 | 3300006038 | Ga0075365_10033636 | Ga0075365_100336363 | 496 |
| 39 | iso_pu_bacteria | 2684623219 | 2687240459 | 496 |
| 40 | 3300046507 | Ga0495606_0008667 | Ga0495606_0008667_1489_3006 | 497 |
| 41 | 3300046616 | Ga0495668_0000265 | Ga0495668_0000265_17916_19433 | 497 |
| 42 | 3300046660 | Ga0495625_0001104 | Ga0495625_0001104_22234_23751 | 497 |
| 43 | 3300048091 | Ga0495626_0000052 | Ga0495626_0000052_53044_54561 | 497 |
| 44 | iso_pu_bacteria | 2599185236 | 2599720425 | 497 |
| 45 | iso_pu_bacteria | 2816332139 | 2816507621 | 497 |
| 46 | iso_pu_bacteria | 2821123053 | 2821128819 | 497 |
| 47 | iso_pu_bacteria | 2838736955 | 2838742023 | 497 |
| 48 | iso_pu_bacteria | 2841840854 | 2841845848 | 497 |
| 49 | iso_pu_bacteria | 2842140634 | 2842145552 | 497 |
| 50 | iso_pu_bacteria | 2857531043 | 2857534028 | 497 |
| 51 | iso_pu_bacteria | 8056060235 | 8056066104 | 497 |
| 52 | 3300005367 | Ga0070667_100063769 | Ga0070667_1000637693 | 498 |
| 53 | 3300025986 | Ga0207658_10027051 | Ga0207658_100270512 | 498 |
| 54 | 3300031456 | Ga0307513_10000002 | Ga0307513_10000002675 | 498 |
| 55 | 3300048917 | Ga0496114_0027214 | Ga0496114_0027214_950_2491 | 498 |
| 56 | iso_pu_bacteria | 2643221576 | 2643890688 | 498 |
| 57 | iso_pu_bacteria | 2643221590 | 2643959744 | 498 |
| 58 | iso_pu_bacteria | 2757320536 | 2758227445 | 498 |
| 59 | iso_pu_bacteria | 2839986021 | 2839988743 | 498 |
| 60 | iso_pu_bacteria | 2919055335 | 2919055969 | 498 |
| 61 | iso_pu_bacteria | 2919523602 | 2919526695 | 498 |
| 62 | iso_pu_bacteria | 2932431166 | 2932434491 | 498 |
| 63 | iso_pu_bacteria | 8016254467 | 8016256285 | 498 |
| 64 | 3300031240 | Ga0265320_10035545 | Ga0265320_100355452 | 499 |
| 65 | 3300042007 | Ga0439449_0009494 | Ga0439449_0009494_300_1823 | 499 |
| 66 | 3300042014 | Ga0439457_001177 | Ga0439457_001177_2681_4204 | 499 |
| 67 | 3300049569 | Ga0501032_0013181 | Ga0501032_0013181_1798_3348 | 499 |
| 68 | iso_pu_bacteria | 2643221641 | 2644229494 | 499 |
| 69 | iso_pu_bacteria | 8054609563 | 8054611576 | 499 |
| 70 | 3300003752 | Ga0055539_1000006 | Ga0055539_1000006189 | 500 |
| 71 | 3300003756 | Ga0055533_1000002 | Ga0055533_1000002273 | 500 |
| 72 | 3300003759 | Ga0055525_1000022 | Ga0055525_100002268 | 500 |
| 73 | 3300005347 | Ga0070668_100000179 | Ga0070668_10000017932 | 500 |
| 74 | 3300006946 | Ga0079104_1000103 | Ga0079104_100010371 | 500 |
| 75 | 3300013104 | Ga0157370_10059837 | Ga0157370_100598372 | 500 |
| 76 | 3300025225 | Ga0209566_100032 | Ga0209566_100032274 | 500 |
| 77 | 3300025226 | Ga0209674_100001 | Ga0209674_1000013290 | 500 |
| 78 | 3300025230 | Ga0209563_100001 | Ga0209563_1000013290 | 500 |
| 79 | 3300025253 | Ga0209677_100001 | Ga0209677_1000013290 | 500 |
| 80 | 3300027111 | Ga0209281_1000512 | Ga0209281_100051238 | 500 |
| 81 | 3300028794 | Ga0307515_10132995 | Ga0307515_101329952 | 500 |
| 82 | 3300044656 | Ga0466969_0023074 | Ga0466969_0023074_1167_2696 | 500 |
| 83 | 3300044683 | Ga0466965_0016049 | Ga0466965_0016049_1744_3297 | 500 |
| 84 | 3300044693 | Ga0466961_0015893 | Ga0466961_0015893_1952_3481 | 500 |
| 85 | 3300044693 | Ga0466961_0058931 | Ga0466961_0058931_226_1755 | 500 |
| 86 | 3300044719 | Ga0466971_0020411 | Ga0466971_0020411_708_2237 | 500 |
| 87 | 3300044765 | Ga0466970_0052822 | Ga0466970_0052822_372_1901 | 500 |
| 88 | 3300045049 | Ga0466959_0021500 | Ga0466959_0021500_2567_4096 | 500 |
| 89 | 3300048914 | Ga0496111_0036190 | Ga0496111_0036190_517_2043 | 500 |
| 90 | 3300048920 | Ga0496117_0000069 | Ga0496117_0000069_11432_12982 | 500 |
| 91 | 3300048920 | Ga0496117_0015273 | Ga0496117_0015273_4983_6512 | 500 |
| 92 | 3300048922 | Ga0496119_0006707 | Ga0496119_0006707_8973_10523 | 500 |
| 93 | 3300048923 | Ga0496120_0002457 | Ga0496120_0002457_17047_18597 | 500 |
| 94 | 3300048923 | Ga0496120_0029574 | Ga0496120_0029574_1717_3267 | 500 |
| 95 | 3300048924 | Ga0496121_0036707 | Ga0496121_0036707_415_1956 | 500 |
| 96 | 3300048925 | Ga0496122_0046992 | Ga0496122_0046992_66_1616 | 500 |
| 97 | 3300048926 | Ga0496123_0011894 | Ga0496123_0011894_4075_5601 | 500 |
| 98 | 3300048926 | Ga0496123_0101051 | Ga0496123_0101051_86_1636 | 500 |
| 99 | 3300048927 | Ga0496124_0020344 | Ga0496124_0020344_41_1591 | 500 |
| 100 | 3300048927 | Ga0496124_0075553 | Ga0496124_0075553_921_2462 | 500 |
| 101 | 3300048928 | Ga0496125_0002413 | Ga0496125_0002413_14701_16251 | 500 |
| 102 | 3300048929 | Ga0496126_0135094 | Ga0496126_0135094_546_2096 | 500 |
| 103 | 3300049571 | Ga0501034_0019201 | Ga0501034_0019201_4331_5866 | 500 |
| 104 | 3300053096 | Ga0500641_0000812 | Ga0500641_0000812_5233_6789 | 500 |
| 105 | 3300053125 | Ga0500618_000041 | Ga0500618_000041_54596_56140 | 500 |
| 106 | iso_pu_bacteria | 2643221961 | 2645722225 | 500 |
| 107 | iso_pu_bacteria | 2643221962 | 2645725095 | 500 |
| 108 | iso_pu_bacteria | 2857729791 | 2857729878 | 500 |
| 109 | iso_pu_bacteria | 2928121344 | 2928122110 | 500 |
| 110 | iso_pu_bacteria | 2984576629 | 2984577331 | 500 |
| 111 | iso_pu_bacteria | 2990256926 | 2990259492 | 500 |
| 112 | 3300005288 | Ga0065714_10010519 | Ga0065714_100105192 | 501 |
| 113 | 3300006178 | Ga0075367_10001140 | Ga0075367_100011406 | 501 |
| 114 | 3300032004 | Ga0307414_10063934 | Ga0307414_100639342 | 501 |
| 115 | 3300048920 | Ga0496117_0000129 | Ga0496117_0000129_44347_45912 | 501 |
| 116 | 3300050494 | nmdc:mga06z11_49393_c1 | nmdc:mga06z11_49393_c1_377_1954 | 501 |
| 117 | iso_pu_bacteria | 2791354901 | 2791911327 | 501 |
| 118 | iso_pu_bacteria | 2855386786 | 2855387954 | 501 |
| 119 | 3300005563 | Ga0068855_100001513 | Ga0068855_10000151315 | 502 |
| 120 | 3300005563 | Ga0068855_100025512 | Ga0068855_1000255126 | 502 |
| 121 | 3300006042 | Ga0075368_10000868 | Ga0075368_100008681 | 502 |
| 122 | 3300006048 | Ga0075363_100003806 | Ga0075363_1000038065 | 502 |
| 123 | 3300006051 | Ga0075364_10043477 | Ga0075364_100434772 | 502 |
| 124 | 3300006178 | Ga0075367_10000524 | Ga0075367_100005247 | 502 |
| 125 | 3300006353 | Ga0075370_10009820 | Ga0075370_100098202 | 502 |
| 126 | 3300009174 | Ga0105241_10110401 | Ga0105241_101104012 | 502 |
| 127 | 3300009551 | Ga0105238_10129631 | Ga0105238_101296311 | 502 |
| 128 | 3300010375 | Ga0105239_10011708 | Ga0105239_100117085 | 502 |
| 129 | 3300010375 | Ga0105239_10230836 | Ga0105239_102308362 | 502 |
| 130 | 3300017792 | Ga0163161_10041361 | Ga0163161_100413612 | 502 |
| 131 | 3300025914 | Ga0207671_10126791 | Ga0207671_101267912 | 502 |
| 132 | 3300025949 | Ga0207667_10043982 | Ga0207667_100439822 | 502 |
| 133 | 3300027866 | Ga0209813_10000754 | Ga0209813_100007544 | 502 |
| 134 | 3300038443 | Ga0395901_0250624 | Ga0395901_0250624_102_1715 | 502 |
| 135 | 3300044693 | Ga0466961_0012396 | Ga0466961_0012396_881_2419 | 502 |
| 136 | 3300049570 | Ga0501033_0011719 | Ga0501033_0011719_4646_6184 | 502 |
| 137 | 3300049571 | Ga0501034_0002595 | Ga0501034_0002595_14368_15906 | 502 |
| 138 | 3300049822 | Ga0501035_0010932 | Ga0501035_0010932_3587_5125 | 502 |
| 139 | 3300050490 | nmdc:mga03n38_730_c1 | nmdc:mga03n38_730_c1_7063_8646 | 502 |
| 140 | 3300050494 | nmdc:mga06z11_3642_c1 | nmdc:mga06z11_3642_c1_1984_3567 | 502 |
| 141 | 3300050495 | nmdc:mga04h51_2677_c1 | nmdc:mga04h51_2677_c1_181_1764 | 502 |
| 142 | 3300053117 | Ga0500593_000060 | Ga0500593_000060_27605_29188 | 502 |
| 143 | 3300013105 | Ga0157369_10133209 | Ga0157369_101332091 | 503 |
| 144 | 3300041413 | Ga0439465_0029718 | Ga0439465_0029718_65_1651 | 503 |
| 145 | 3300042004 | Ga0439445_0002946 | Ga0439445_0002946_1719_3305 | 503 |
| 146 | 3300042435 | Ga0439434_0001628 | Ga0439434_0001628_3404_4990 | 503 |
| 147 | 3300042439 | Ga0439464_0001246 | Ga0439464_0001246_31_1605 | 503 |
| 148 | 3300048920 | Ga0496117_0084245 | Ga0496117_0084245_310_1893 | 503 |
| 149 | 3300048921 | Ga0496118_0033577 | Ga0496118_0033577_213_1844 | 503 |
| 150 | iso_pu_bacteria | 2643221617 | 2644100704 | 503 |
| 151 | iso_pu_bacteria | 2757320536 | 2758227442 | 503 |
| 152 | iso_pu_bacteria | 2773857758 | 2774379909 | 503 |
| 153 | iso_pu_bacteria | 2904509784 | 2904513045 | 503 |
| 154 | iso_pu_bacteria | 2908678064 | 2908679079 | 503 |
| 155 | iso_pu_bacteria | 2919069694 | 2919069715 | 503 |
| 156 | iso_pu_bacteria | 2977264416 | 2977264439 | 503 |
| 157 | iso_pu_bacteria | 2738541305 | 2738869595 | 504 |
| 158 | iso_pu_bacteria | 2857481737 | 2857483195 | 504 |
| 159 | iso_pu_bacteria | 2862993130 | 2862996781 | 504 |
| 160 | iso_pu_bacteria | 2984592036 | 2984592731 | 504 |
| 161 | 3300005366 | Ga0070659_100023792 | Ga0070659_1000237923 | 505 |
| 162 | 3300005564 | Ga0070664_100055565 | Ga0070664_1000555652 | 505 |
| 163 | 3300009036 | Ga0105244_10008079 | Ga0105244_100080793 | 505 |
| 164 | 3300014325 | Ga0163163_10253677 | Ga0163163_102536772 | 505 |
| 165 | 3300025932 | Ga0207690_10056461 | Ga0207690_100564611 | 505 |
| 166 | 3300025945 | Ga0207679_10014448 | Ga0207679_100144484 | 505 |
| 167 | 3300044765 | Ga0466970_0007458 | Ga0466970_0007458_2143_3741 | 505 |
| 168 | 3300045976 | Ga0466967_0003531 | Ga0466967_0003531_6998_8707 | 505 |
| 169 | 3300048920 | Ga0496117_0000069 | Ga0496117_0000069_15089_16624 | 505 |
| 170 | 3300048922 | Ga0496119_0006707 | Ga0496119_0006707_5325_6860 | 505 |
| 171 | 3300048923 | Ga0496120_0002457 | Ga0496120_0002457_13399_14934 | 505 |
| 172 | 3300048923 | Ga0496120_0028215 | Ga0496120_0028215_1366_2901 | 505 |
| 173 | 3300048925 | Ga0496122_0049628 | Ga0496122_0049628_373_1908 | 505 |
| 174 | 3300048926 | Ga0496123_0003278 | Ga0496123_0003278_14660_16195 | 505 |
| 175 | 3300048927 | Ga0496124_0003529 | Ga0496124_0003529_2194_3729 | 505 |
| 176 | 3300048928 | Ga0496125_0002413 | Ga0496125_0002413_11059_12594 | 505 |
| 177 | 3300048929 | Ga0496126_0013525 | Ga0496126_0013525_5065_6600 | 505 |
| 178 | iso_pu_bacteria | 2643221615 | 2644091325 | 505 |
| 179 | iso_pu_bacteria | 2643221657 | 2644321128 | 505 |
| 180 | iso_pu_bacteria | 2643221681 | 2644455844 | 505 |
| 181 | iso_pu_bacteria | 2977228692 | 2977229291 | 505 |
| 182 | iso_pu_bacteria | 2977236895 | 2977238671 | 505 |
| 183 | iso_pu_bacteria | 2977264416 | 2977264436 | 505 |
| 184 | iso_pu_bacteria | 2984542743 | 2984543546 | 505 |
| 185 | iso_pu_bacteria | 8016254467 | 8016256288 | 505 |
| 186 | 3300037471 | Ga0395905_0109140 | Ga0395905_0109140_322_1920 | 506 |
| 187 | iso_pu_bacteria | 2773857758 | 2774379906 | 506 |
| 188 | iso_pu_bacteria | 2904509784 | 2904513042 | 506 |
| 189 | iso_pu_bacteria | 2908678064 | 2908679082 | 506 |
| 190 | iso_pu_bacteria | 2919069694 | 2919069718 | 506 |
| 191 | iso_pu_bacteria | 2977228692 | 2977229294 | 506 |
| 192 | iso_pu_bacteria | 2977236895 | 2977238668 | 506 |
| 193 | iso_pu_bacteria | 2984542743 | 2984543549 | 506 |
| 194 | 3300044683 | Ga0466965_0007724 | Ga0466965_0007724_2596_4194 | 507 |
| 195 | 3300044765 | Ga0466970_0022848 | Ga0466970_0022848_147_1745 | 507 |
| 196 | 3300044684 | Ga0466966_0023063 | Ga0466966_0023063_1469_3007 | 510 |
| 197 | 3300045836 | Ga0466958_0025458 | Ga0466958_0025458_1008_2546 | 510 |
| 198 | iso_pu_bacteria | 2919055335 | 2919055966 | 511 |
| 199 | iso_pu_bacteria | 2919523602 | 2919526698 | 511 |
| 200 | 3300048920 | Ga0496117_0015273 | Ga0496117_0015273_1300_2862 | 514 |
| 201 | 3300003752 | Ga0055539_1000006 | Ga0055539_1000006186 | 517 |
| 202 | 3300003756 | Ga0055533_1000002 | Ga0055533_1000002270 | 517 |
| 203 | 3300003759 | Ga0055525_1000022 | Ga0055525_100002265 | 517 |
| 204 | 3300003841 | Ga0055541_1002090 | Ga0055541_10020905 | 517 |
| 205 | 3300025225 | Ga0209566_100032 | Ga0209566_100032271 | 517 |
| 206 | 3300025226 | Ga0209674_100001 | Ga0209674_1000013293 | 517 |
| 207 | 3300025230 | Ga0209563_100001 | Ga0209563_1000013293 | 517 |
| 208 | 3300025253 | Ga0209677_100001 | Ga0209677_1000013293 | 517 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6z67-assembly3.cif.gz_E | ftse structure of streptococcus pneumoniae in complex with amppnp at 2.4 a resolution | 0.888 | 4 | 226 |
| 2yyz-assembly1.cif.gz_A | crystal structure of sugar abc transporter, atp-binding protein | 0.8877 | 7 | 228 |
| 5xu1-assembly1.cif.gz_A | structure of a non-canonical abc transporter from streptococcus pneumoniae r6 | 0.8856 | 4 | 223 |
| 2pcj-assembly1.cif.gz_B | crystal structure of abc transporter (aq_297) from aquifex aeolicus vf5 | 0.8845 | 4 | 225 |
| 2awo-assembly2.cif.gz_D | crystal structure of the adp-mg-bound e. coli malk (crystallized with adp-mg) | 0.883 | 7 | 228 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P77509_7_245_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9727 | 5 | 237 | 3.40.50.300 |
| af_Q6BEX0_1_254_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9724 | 1 | 245 | 3.40.50.300 |
| af_P37388_2_240_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9685 | 4 | 240 | 3.40.50.300 |
| af_Q6BEX0_265_495_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9667 | 266 | 494 | 3.40.50.300 |
| af_P37388_2_240_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9566 | 4 | 240 | 3.40.50.300 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A1W2CIV3-F1-model_v4 | Monosaccharide ABC transporter ATP-binding protein, CUT2 family | 0.9756 | 1 | 240 |
GO:0005524
GO:0016887 |
| AF-A0A355RWD2-F1-model_v4 | Heme ABC transporter ATP-binding protein | 0.9751 | 4 | 226 |
GO:0005524
GO:0016887 |
| AF-A0A154IK00-F1-model_v4 | ABC transporter ATP-binding protein | 0.9716 | 2 | 240 |
GO:0005524
GO:0016887 |
| AF-A0A419Z768-F1-model_v4 | deleted | 0.9673 | 2 | 239 |
|
| AF-A0A2D5UM03-F1-model_v4 | ABC transporter ATP-binding protein | 0.9638 | 1 | 238 |
GO:0005524
GO:0016887 |
Predicted Structure (AlphaFold2)
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