F317504

General Info

Members Datasets Scaffolds Average Seq Length
208 106 404 527

Family's Representative Sequence

Representative Sequence 3300005468|Ga0070707_100053432|Ga0070707_1000534323
Length 543
Sequence MNWRPGTLTTAGLSLAVLFAASVSAKPGLAQQTGGILRMSHFDSPASMSMHEESTAAVNRPMMGVFNNLVMYRQDVPQNSVESIVPDLATGWSWSEDATELTLPLRQGVKWHDGKPFTAKDVKCTWDLLTGKAAEKFRLNPRKSWYTNLEEVTANGDHEVTFRLKRPQPSFIALLAAGWSPVYPCHVPPRDMRLKPIGTGPFKFVEFKPNELIRVAKNPDYWKPGRPFLDGVEWPIIPSISTRLLGFVADKFDTVYGVTIPLLHDVRSQAPQAICDVIPTNVPRTLLVNRAVPPLDNPELRRAMSLTVDRKAFIDILTLGQGDVGGAMLPAPEGIWGMPPELLKTLPGYGPDVAKNRAEARSLMEKLGYGPNKRLGFKVAVRNIQAARDPAVILIDHLKEIYIDGELDTVDTTNWYPKVMRKDFTVGAVVSENGLDDPDQQFYENFVCGAERNYGGYCNPELDRMIDRQSMEPDPEKRRQLVWQIEKRLVEDSVRPVIFYPRAAICAQPRVKGLTQMVNSIYNGSRLEDVWLEQGIGSSVSRQ

Samples

Sample ID Description Type Environment
1 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
2 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
3 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
4 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
5 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
6 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
7 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
8 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
9 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
10 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
11 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
14 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
15 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
16 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
17 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
23 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
24 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
25 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
26 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
27 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
28 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
29 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
30 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
31 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
32 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
33 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
34 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
35 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
36 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
37 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
38 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
39 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
40 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
41 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
42 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
43 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
64 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
65 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
66 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
67 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
68 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
69 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
70 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
71 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
72 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
73 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
74 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
75 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
76 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
77 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
78 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
79 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
80 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
81 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
82 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
83 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
84 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
85 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
86 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
87 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
88 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
89 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
90 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
91 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
92 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
93 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
94 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
95 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
98 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
99 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
100 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
101 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
102 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
103 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
104 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
105 2824746037 Bradyrhizobium sp. HAMBI 2299 Isolate Unclassified
106 2908775508 Bradyrhizobium sp. SUTN9-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.04
Metatranscriptomes 0
Isolates 0.96

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.88
Nodule 0
Rhizoplane 2.4
Rhizosphere 88.94
Stem 0
Stem Tuber 0
Unclassified 0.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070707_100053432 3300005468 Bacteria 3873
2 Ga0070709_10057830 3300005434 Bacteria 2458
3 Ga0070714_100091846 3300005435 Bacteria 2660
4 Ga0070713_100025151 3300005436 Bacteria 4650
5 Ga0070713_100052492 3300005436 Bacteria 3375
6 Ga0070713_100084755 3300005436 Bacteria 2712
7 Ga0070713_100089739 3300005436 Bacteria 2641
8 Ga0070713_100120680 3300005436 Bacteria 2299
9 Ga0070713_100125675 3300005436 Bacteria 2255
10 Ga0070710_10014986 3300005437 Bacteria 3913
11 Ga0070710_10020145 3300005437 Unclassified 3456
12 Ga0070710_10067212 3300005437 Bacteria 2056
13 Ga0070710_10087385 3300005437 Bacteria 1832
14 Ga0070711_100040629 3300005439 Bacteria 3137
15 Ga0070708_100082281 3300005445 Bacteria 2916
16 Ga0070681_10157904 3300005458 Bacteria 2192
17 Ga0070706_100032939 3300005467 Bacteria 4781
18 Ga0070706_100043468 3300005467 Bacteria 4152
19 Ga0070706_100047265 3300005467 Bacteria 3971
20 Ga0070706_100049008 3300005467 Bacteria 3898
21 Ga0070706_100104650 3300005467 Bacteria 2633
22 Ga0070707_100001562 3300005468 Bacteria 22250
23 Ga0070707_100005179 3300005468 Bacteria 12217
24 Ga0070707_100009252 3300005468 Bacteria 9141
25 Ga0070707_100019120 3300005468 Bacteria 6450
26 Ga0070707_100027388 3300005468 Bacteria 5423
27 Ga0070707_100031790 3300005468 Bacteria 5028
28 Ga0070707_100085060 3300005468 Bacteria 3056
29 Ga0070707_100152486 3300005468 Bacteria 2250
30 Ga0070707_100171585 3300005468 Bacteria 2113
31 Ga0070698_100000605 3300005471 Bacteria 38553
32 Ga0070698_100003768 3300005471 Bacteria 16655
33 Ga0070698_100004893 3300005471 Bacteria 14702
34 Ga0070698_100094601 3300005471 Bacteria 2967
35 Ga0070699_100034507 3300005518 Bacteria 4373
36 Ga0070699_100092132 3300005518 Bacteria 2650
37 Ga0070684_100102070 3300005535 Bacteria 2564
38 Ga0070697_100024370 3300005536 Bacteria 4817
39 Ga0070697_100026443 3300005536 Bacteria 4636
40 Ga0070697_100069528 3300005536 Bacteria 2884
41 Ga0070697_100114294 3300005536 Bacteria 2253
42 Ga0068853_100060949 3300005539 Bacteria 3262
43 Ga0070695_100003992 3300005545 Bacteria 8620
44 Ga0070696_100015017 3300005546 Bacteria 5200
45 Ga0070704_100012112 3300005549 Bacteria 5320
46 Ga0068855_100137359 3300005563 Bacteria 2788
47 Ga0070664_100008442 3300005564 Bacteria 8331
48 Ga0070664_100142250 3300005564 Bacteria 2113
49 Ga0068856_100053811 3300005614 Bacteria 3969
50 Ga0068852_100003470 3300005616 Bacteria 11025
51 Ga0068862_100042593 3300005844 Bacteria 3868
52 Ga0081540_1004061 3300005983 Bacteria 11335
53 Ga0081540_1005085 3300005983 Bacteria 9868
54 Ga0081540_1008190 3300005983 Bacteria 7321
55 Ga0070717_10002180 3300006028 Bacteria 13735
56 Ga0070717_10005557 3300006028 Bacteria 9197
57 Ga0070717_10017381 3300006028 Bacteria 5598
58 Ga0070717_10097865 3300006028 Bacteria 2486
59 Ga0070717_10129323 3300006028 Bacteria 2170
60 Ga0075365_10014302 3300006038 Bacteria 4772
61 Ga0070715_10025703 3300006163 Bacteria 2336
62 Ga0070716_100031353 3300006173 Bacteria 2890
63 Ga0070716_100035767 3300006173 Plasmid 2733
64 Ga0070712_100009436 3300006175 Bacteria 6149
65 Ga0070712_100048963 3300006175 Bacteria 2932
66 Ga0070712_100076887 3300006175 Bacteria 2404
67 Ga0070712_100080924 3300006175 Bacteria 2352
68 Ga0070712_100112108 3300006175 Bacteria 2037
69 Ga0075366_10078007 3300006195 Bacteria 1977
70 Ga0075370_10069658 3300006353 Bacteria 2011
71 Ga0075431_100033921 3300006847 Bacteria 5259
72 Ga0075431_100159570 3300006847 Bacteria 2319
73 Ga0075429_100116216 3300006880 Bacteria 2339
74 Ga0075436_100043677 3300006914 Bacteria 3090
75 Ga0075435_100026368 3300007076 Bacteria 4533
76 Ga0099795_10002957 3300007788 Bacteria 4122
77 Ga0099795_10009581 3300007788 Bacteria 2817
78 Ga0099795_10019159 3300007788 Bacteria 2209
79 Ga0105248_10105028 3300009177 Bacteria 3185
80 Ga0105249_10034161 3300009553 Bacteria 4605
81 Ga0105249_10222746 3300009553 Bacteria 1857
82 Ga0099796_10001395 3300010159 Bacteria 4835
83 Ga0099796_10002576 3300010159 Bacteria 4015
84 Ga0099796_10002682 3300010159 Bacteria 3969
85 Ga0099796_10002945 3300010159 Bacteria 3852
86 Ga0099796_10006068 3300010159 Bacteria 3071
87 Ga0099796_10007130 3300010159 Bacteria 2908
88 Ga0099796_10007434 3300010159 Bacteria 2863
89 Ga0157369_10033957 3300013105 Bacteria 5602
90 Ga0157375_10064028 3300013308 Bacteria 3660
91 Ga0182008_10014476 3300014497 Bacteria 4130
92 Ga0182008_10033973 3300014497 Bacteria 2558
93 Ga0213875_10007043 3300021388 Bacteria 5847
94 Ga0207692_10035273 3300025898 Bacteria 2429
95 Ga0207692_10075863 3300025898 Bacteria 1785
96 Ga0207684_10031866 3300025910 Bacteria 4485
97 Ga0207684_10035413 3300025910 Bacteria 4239
98 Ga0207684_10076000 3300025910 Bacteria 2854
99 Ga0207684_10082273 3300025910 Bacteria 2741
100 Ga0207684_10112974 3300025910 Bacteria 2325
101 Ga0207707_10046437 3300025912 Bacteria 3783
102 Ga0207693_10005569 3300025915 Bacteria 10479
103 Ga0207693_10005961 3300025915 Bacteria 10108
104 Ga0207693_10016680 3300025915 Bacteria 5866
105 Ga0207693_10016772 3300025915 Bacteria 5847
106 Ga0207693_10018328 3300025915 Bacteria 5577
107 Ga0207693_10027957 3300025915 Bacteria 4458
108 Ga0207693_10029897 3300025915 Bacteria 4299
109 Ga0207693_10046795 3300025915 Bacteria 3399
110 Ga0207693_10047588 3300025915 Unclassified 3369
111 Ga0207693_10054662 3300025915 Bacteria 3132
112 Ga0207693_10098440 3300025915 Bacteria 2293
113 Ga0207693_10107596 3300025915 Bacteria 2187
114 Ga0207693_10135097 3300025915 Bacteria 1939
115 Ga0207663_10030439 3300025916 Bacteria 3184
116 Ga0207646_10004166 3300025922 Bacteria 15858
117 Ga0207646_10011443 3300025922 Bacteria 8597
118 Ga0207646_10013906 3300025922 Bacteria 7675
119 Ga0207646_10024927 3300025922 Bacteria 5473
120 Ga0207646_10057948 3300025922 Bacteria 3460
121 Ga0207646_10086926 3300025922 Bacteria 2798
122 Ga0207646_10122406 3300025922 Bacteria 2338
123 Ga0207694_10021542 3300025924 Bacteria 4884
124 Ga0207700_10015843 3300025928 Bacteria 4987
125 Ga0207700_10037560 3300025928 Bacteria 3508
126 Ga0207664_10068793 3300025929 Bacteria 2846
127 Ga0207664_10103200 3300025929 Bacteria 2359
128 Ga0207644_10079672 3300025931 Bacteria 2417
129 Ga0207665_10024432 3300025939 Bacteria 3984
130 Ga0207665_10028840 3300025939 Bacteria 3669
131 Ga0207665_10051973 3300025939 Bacteria 2760
132 Ga0207665_10056171 3300025939 Bacteria 2657
133 Ga0207679_10018214 3300025945 Bacteria 4701
134 Ga0207679_10118405 3300025945 Bacteria 2103
135 Ga0207712_10050611 3300025961 Bacteria 2901
136 Ga0207702_10083740 3300026078 Bacteria 2776
137 Ga0207676_10065840 3300026095 Bacteria 2887
138 Ga0207675_100056300 3300026118 Bacteria 3667
139 Ga0207698_10015975 3300026142 Bacteria 5048
140 Ga0209179_1001833 3300027512 Bacteria 2723
141 Ga0209179_1013560 3300027512 Bacteria 1483
142 Ga0268266_10011424 3300028379 Bacteria 7723
143 Ga0268265_10027611 3300028380 Bacteria 4053
144 Ga0265325_10048872 3300031241 Bacteria 2185
145 Ga0265313_10035747 3300031595 Bacteria 2499
146 Ga0373926_0002054 3300035083 Bacteria 6336
147 Ga0373944_0019552 3300035089 Bacteria 1945
148 Ga0373955_0023630 3300035172 Bacteria 3134
149 Ga0373927_0017047 3300035695 Bacteria 4786
150 Ga0373937_0020502 3300036401 Bacteria 5926
151 Ga0373937_0054028 3300036401 Bacteria 3685
152 Ga0373937_0086003 3300036401 Bacteria 2910
153 Ga0373925_0048446 3300037068 Bacteria 3166
154 Ga0436364_0233397 3300037853 Bacteria 2554
155 Ga0436364_0394446 3300037853 Bacteria 4538
156 Ga0436364_0621828 3300037853 Bacteria 27902
157 Ga0436364_1103648 3300037853 Bacteria 2165
158 Ga0436364_1245271 3300037853 Bacteria 49699
159 Ga0436364_1520677 3300037853 Bacteria 72551
160 Ga0395901_0002997 3300038443 Bacteria 17031
161 Ga0436365_0402127 3300039437 Bacteria 9358
162 Ga0436365_1835366 3300039437 Bacteria 2944
163 Ga0436360_0127530 3300039438 Bacteria 3023
164 Ga0436361_0494895 3300039447 Bacteria 1811
165 Ga0436363_0483749 3300039450 Bacteria 5912
166 Ga0436362_0099502 3300039453 Bacteria 2514
167 Ga0436362_0180656 3300039453 Bacteria 2286
168 Ga0436362_0696286 3300039453 Bacteria 3601
169 Ga0466963_0023751 3300044694 Bacteria 3897
170 Ga0466967_0145126 3300045976 Bacteria 2213
171 Ga0495592_0010171 3300046454 Bacteria 7093
172 Ga0495580_0166010 3300046472 Bacteria 1527
173 Ga0495662_0005027 3300046476 Bacteria 6627
174 Ga0495594_0064311 3300046499 Bacteria 2034
175 Ga0495628_0169869 3300046516 Bacteria 1654
176 Ga0495640_0047088 3300046533 Bacteria 2985
177 Ga0495586_0069730 3300046535 Bacteria 1919
178 Ga0495667_0005589 3300046559 Bacteria 8504
179 Ga0495667_0007591 3300046559 Bacteria 7360
180 Ga0495635_0007549 3300046663 Bacteria 7588
181 Ga0495599_0107589 3300046678 Bacteria 1737
182 Ga0495600_0010821 3300046809 Bacteria 5673
183 Ga0496102_0181698 3300048905 Bacteria 1982
184 Ga0496104_0223166 3300048907 Bacteria 1797
185 Ga0496106_0008902 3300048909 Bacteria 7420
186 Ga0496112_0041629 3300048915 Bacteria 4495
187 Ga0496112_0072831 3300048915 Bacteria 3396
188 Ga0501040_0115199 3300049576 Bacteria 1882
189 Ga0501047_0150643 3300049581 Bacteria 2202
190 Ga0501047_0171407 3300049581 Bacteria 2039
191 Ga0501075_0120326 3300049591 Bacteria 1998
192 nmdc:mga0yw44_274_c1 3300050492 Bacteria 17652
193 nmdc:mga06z11_57502_c1 3300050494 Bacteria 2015
194 nmdc:mga09592_129340_c1 3300050508 Bacteria 2172
195 nmdc:mga06r32_3943_c1 3300050510 Bacteria 13304
196 Ga0495601_0014807 3300053077 Bacteria 4706
197 Ga0495601_0045888 3300053077 Bacteria 2749
198 Ga0495619_0001729 3300053085 Bacteria 14480
199 Ga0495619_0060462 3300053085 Bacteria 2518
200 Ga0500616_0007203 3300053153 Bacteria 7112
201 2824749146 2824746037 Bacteria 7911610
202 2908776586 2908775508 Bacteria 8092255
203 Ga0070707_100053432
204 Ga0070709_10057830
205 Ga0070714_100091846
206 Ga0070713_100025151
207 Ga0070713_100052492
208 Ga0070713_100084755
209 Ga0070713_100089739
210 Ga0070713_100120680
211 Ga0070713_100125675
212 Ga0070710_10014986
213 Ga0070710_10020145
214 Ga0070710_10067212
215 Ga0070710_10087385
216 Ga0070711_100040629
217 Ga0070708_100082281
218 Ga0070681_10157904
219 Ga0070706_100032939
220 Ga0070706_100043468
221 Ga0070706_100047265
222 Ga0070706_100049008
223 Ga0070706_100104650
224 Ga0070707_100001562
225 Ga0070707_100005179
226 Ga0070707_100009252
227 Ga0070707_100019120
228 Ga0070707_100027388
229 Ga0070707_100031790
230 Ga0070707_100085060
231 Ga0070707_100152486
232 Ga0070707_100171585
233 Ga0070698_100000605
234 Ga0070698_100003768
235 Ga0070698_100004893
236 Ga0070698_100094601
237 Ga0070699_100034507
238 Ga0070699_100092132
239 Ga0070684_100102070
240 Ga0070697_100024370
241 Ga0070697_100026443
242 Ga0070697_100069528
243 Ga0070697_100114294
244 Ga0068853_100060949
245 Ga0070695_100003992
246 Ga0070696_100015017
247 Ga0070704_100012112
248 Ga0068855_100137359
249 Ga0070664_100008442
250 Ga0070664_100142250
251 Ga0068856_100053811
252 Ga0068852_100003470
253 Ga0068862_100042593
254 Ga0081540_1004061
255 Ga0081540_1005085
256 Ga0081540_1008190
257 Ga0070717_10002180
258 Ga0070717_10005557
259 Ga0070717_10017381
260 Ga0070717_10097865
261 Ga0070717_10129323
262 Ga0075365_10014302
263 Ga0070715_10025703
264 Ga0070716_100031353
265 Ga0070716_100035767
266 Ga0070712_100009436
267 Ga0070712_100048963
268 Ga0070712_100076887
269 Ga0070712_100080924
270 Ga0070712_100112108
271 Ga0075366_10078007
272 Ga0075370_10069658
273 Ga0075431_100033921
274 Ga0075431_100159570
275 Ga0075429_100116216
276 Ga0075436_100043677
277 Ga0075435_100026368
278 Ga0099795_10002957
279 Ga0099795_10009581
280 Ga0099795_10019159
281 Ga0105248_10105028
282 Ga0105249_10034161
283 Ga0105249_10222746
284 Ga0099796_10001395
285 Ga0099796_10002576
286 Ga0099796_10002682
287 Ga0099796_10002945
288 Ga0099796_10006068
289 Ga0099796_10007130
290 Ga0099796_10007434
291 Ga0157369_10033957
292 Ga0157375_10064028
293 Ga0182008_10014476
294 Ga0182008_10033973
295 Ga0213875_10007043
296 Ga0207692_10035273
297 Ga0207692_10075863
298 Ga0207684_10031866
299 Ga0207684_10035413
300 Ga0207684_10076000
301 Ga0207684_10082273
302 Ga0207684_10112974
303 Ga0207707_10046437
304 Ga0207693_10005569
305 Ga0207693_10005961
306 Ga0207693_10016680
307 Ga0207693_10016772
308 Ga0207693_10018328
309 Ga0207693_10027957
310 Ga0207693_10029897
311 Ga0207693_10046795
312 Ga0207693_10047588
313 Ga0207693_10054662
314 Ga0207693_10098440
315 Ga0207693_10107596
316 Ga0207693_10135097
317 Ga0207663_10030439
318 Ga0207646_10004166
319 Ga0207646_10011443
320 Ga0207646_10013906
321 Ga0207646_10024927
322 Ga0207646_10057948
323 Ga0207646_10086926
324 Ga0207646_10122406
325 Ga0207694_10021542
326 Ga0207700_10015843
327 Ga0207700_10037560
328 Ga0207664_10068793
329 Ga0207664_10103200
330 Ga0207644_10079672
331 Ga0207665_10024432
332 Ga0207665_10028840
333 Ga0207665_10051973
334 Ga0207665_10056171
335 Ga0207679_10018214
336 Ga0207679_10118405
337 Ga0207712_10050611
338 Ga0207702_10083740
339 Ga0207676_10065840
340 Ga0207675_100056300
341 Ga0207698_10015975
342 Ga0209179_1001833
343 Ga0209179_1013560
344 Ga0268266_10011424
345 Ga0268265_10027611
346 Ga0265325_10048872
347 Ga0265313_10035747
348 Ga0373926_0002054
349 Ga0373944_0019552
350 Ga0373955_0023630
351 Ga0373927_0017047
352 Ga0373937_0020502
353 Ga0373937_0054028
354 Ga0373937_0086003
355 Ga0373925_0048446
356 Ga0436364_0233397
357 Ga0436364_0394446
358 Ga0436364_0621828
359 Ga0436364_1103648
360 Ga0436364_1245271
361 Ga0436364_1520677
362 Ga0395901_0002997
363 Ga0436365_0402127
364 Ga0436365_1835366
365 Ga0436360_0127530
366 Ga0436361_0494895
367 Ga0436363_0483749
368 Ga0436362_0099502
369 Ga0436362_0180656
370 Ga0436362_0696286
371 Ga0466963_0023751
372 Ga0466967_0145126
373 Ga0495592_0010171
374 Ga0495580_0166010
375 Ga0495662_0005027
376 Ga0495594_0064311
377 Ga0495628_0169869
378 Ga0495640_0047088
379 Ga0495586_0069730
380 Ga0495667_0005589
381 Ga0495667_0007591
382 Ga0495635_0007549
383 Ga0495599_0107589
384 Ga0495600_0010821
385 Ga0496102_0181698
386 Ga0496104_0223166
387 Ga0496106_0008902
388 Ga0496112_0041629
389 Ga0496112_0072831
390 Ga0501040_0115199
391 Ga0501047_0150643
392 Ga0501047_0171407
393 Ga0501075_0120326
394 nmdc:mga0yw44_274_c1
395 nmdc:mga06z11_57502_c1
396 nmdc:mga09592_129340_c1
397 nmdc:mga06r32_3943_c1
398 Ga0495601_0014807
399 Ga0495601_0045888
400 Ga0495619_0001729
401 Ga0495619_0060462
402 Ga0500616_0007203
403 2824749146
404 2908776586

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00496

SBP_bac_5

Bacterial extracellular solute-binding proteins, family 5 Middle

83

453

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
3m8u-assembly1.cif.gz_A crystal structure of glutathione-binding protein a (gbpa) from haemophilus parasuis sh0165 in complex with glutathione disulfide (gssg) 0.87 4 498
3m8u-assembly1.cif.gz_A crystal structure of glutathione-binding protein a (gbpa) from haemophilus parasuis sh0165 in complex with glutathione disulfide (gssg) 0.8634 4 498
4oeu-assembly2.cif.gz_B crystal structure of nikz from campylobacter jejuni in complex with ni(l-his) 0.8537 2 482
6hlx-assembly1.cif.gz_A structure of the pbp agaa in complex with agropinic acid from a.tumefacien r10 0.8531 4 498
4qfo-assembly1.cif.gz_A crystal structure of dipeptide binding protein from pseudoalteromonas sp. sm9913 in complex with met-leu 0.8495 2 482
ID Description Score Start End Superfamily
af_Q93332_623_774_1.20.930.40 Mainly Alpha;Up-down Bundle;Transcription Elongation Factor S-II; Chain A;Transferrin receptor-like, dimerisation domain 0.9149 424 458 1.20.930.40
5isuA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9052 153 241 3.40.190.10
af_P75797_27_224_3.10.105.10 Alpha Beta;Roll;Dipeptide-binding Protein; domain 3;Dipeptide-binding Protein; Domain 3 0.9045 1 199 3.10.105.10
af_Q46863_291_502_3.10.105.10 Alpha Beta;Roll;Dipeptide-binding Protein; domain 3;Dipeptide-binding Protein; Domain 3 0.8964 248 463 3.10.105.10
4oetA02 Alpha Beta;Alpha-Beta Complex;Dipeptide-binding Protein; domain 1;Dipeptide-binding Protein; Domain 1 0.8899 28 138 3.90.76.10
ID Description Score Start End GO Terms
AF-A0A537PBK6-F1-model_v4 Peptide ABC transporter substrate-binding protein 0.9821 1 112 GO:0015833
GO:1904680
AF-A0A2V6PAU6-F1-model_v4 Peptide ABC transporter substrate-binding protein 0.978 9 169 GO:0015833
GO:1904680
AF-A0A537N7K2-F1-model_v4 Peptide ABC transporter substrate-binding protein 0.9545 5 138 GO:0015833
GO:1904680
AF-A0A1B3MK32-F1-model_v4 deleted 0.9336 2 498
AF-A0A2W7IMI6-F1-model_v4 Peptide/nickel transport system substrate-binding protein 0.9302 2 496 GO:0015031
GO:0015833
GO:0030288
GO:0043190
GO:1904680

Map