F317322

General Info

Members Datasets Scaffolds Average Seq Length
208 151 416 97

Family's Representative Sequence

Representative Sequence 3300005327|Ga0070658_10090444|Ga0070658_100904444
Length 103
Sequence MTWLALLGAGVGCYLLKLAGVSLPARALDHPVVERVADLIPVALLAALVAVQVFADGTRLTVDARAAGLGAAVVALLLRAPFLVVVFVAAATAGLLRLVLPGS

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
7 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
10 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
22 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
23 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
24 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
25 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
26 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
27 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
28 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
29 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
32 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
33 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
34 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
35 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
36 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
37 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
38 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
39 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
40 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
41 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
42 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
67 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
68 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
69 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
70 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
71 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
72 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
73 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
74 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
75 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
76 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
77 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
78 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
79 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
80 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
81 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
82 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
83 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
84 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
85 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
86 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
87 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
88 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
89 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
90 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
91 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
92 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
93 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
94 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
95 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
96 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
97 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
98 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
99 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
100 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
101 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
102 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
103 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
104 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
105 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
106 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
107 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
108 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
109 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
110 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
111 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
112 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
113 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
114 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
115 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
116 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
117 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
118 3300049527 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
119 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
127 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
128 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
129 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
130 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
131 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
132 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
133 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
134 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
135 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
136 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
137 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
138 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
139 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
140 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
141 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
142 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
143 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
144 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
145 2643221620 Nocardioides sp. Root240 Isolate Unclassified
146 2643221641 Nocardioides sp. Root122 Isolate Unclassified
147 2739367898 Nocardioides sp. CF479 Isolate Unclassified
148 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
149 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
150 8053945823 Actinomadura terrae OS3-83 Isolate Rhizosphere
151 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 95.67
Metatranscriptomes 0.96
Isolates 3.37

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.92
Nodule 0.48
Rhizoplane 7.69
Rhizosphere 85.1
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10090444 3300005327 Bacteria 2522
2 LJQas_1005035 3300000549 Bacteria 1691
3 Ga0070683_101538442 3300005329 Bacteria 639
4 Ga0070683_101863338 3300005329 Bacteria 578
5 Ga0070680_100089703 3300005336 Bacteria 2544
6 Ga0070660_100136930 3300005339 Bacteria 1962
7 Ga0070660_101873986 3300005339 Bacteria 511
8 Ga0070674_101601886 3300005356 Bacteria 587
9 Ga0070667_100057101 3300005367 Bacteria 3297
10 Ga0070667_101702248 3300005367 Bacteria 593
11 Ga0070714_100070656 3300005435 Bacteria 3018
12 Ga0070701_10609407 3300005438 Bacteria 724
13 Ga0070700_100311982 3300005441 Bacteria 1152
14 Ga0070700_100332065 3300005441 Bacteria 1121
15 Ga0070663_101926500 3300005455 Bacteria 531
16 Ga0070678_101381854 3300005456 Bacteria 657
17 Ga0070681_10022951 3300005458 Bacteria 6270
18 Ga0070685_11482789 3300005466 Bacteria 522
19 Ga0070679_100255369 3300005530 Bacteria 1708
20 Ga0070684_101023775 3300005535 Bacteria 775
21 Ga0070665_100000865 3300005548 Bacteria 39234
22 Ga0070665_100729914 3300005548 Bacteria 1004
23 Ga0070665_100760137 3300005548 Bacteria 982
24 Ga0068857_100231253 3300005577 Bacteria 1691
25 Ga0068857_100303176 3300005577 Bacteria 1473
26 Ga0068857_100758093 3300005577 Bacteria 925
27 Ga0068856_101030281 3300005614 Bacteria 841
28 Ga0068859_101100039 3300005617 Bacteria 874
29 Ga0068864_100918282 3300005618 Bacteria 865
30 Ga0068864_101536844 3300005618 Bacteria 669
31 Ga0068866_10393076 3300005718 Bacteria 892
32 Ga0068861_100047172 3300005719 Bacteria 3251
33 Ga0068861_100144828 3300005719 Bacteria 1943
34 Ga0068860_101867614 3300005843 Bacteria 622
35 Ga0081539_10192238 3300005985 Bacteria 949
36 Ga0075363_100942444 3300006048 Bacteria 530
37 Ga0075366_10933051 3300006195 Bacteria 541
38 Ga0068865_100660741 3300006881 Bacteria 889
39 Ga0097620_101100134 3300006931 Bacteria 874
40 Ga0111539_10219058 3300009094 Bacteria 2217
41 Ga0105243_10762046 3300009148 Bacteria 950
42 Ga0105243_11419391 3300009148 Bacteria 715
43 Ga0105243_11482964 3300009148 Bacteria 701
44 Ga0105242_10317353 3300009176 Bacteria 1428
45 Ga0105242_10697577 3300009176 Bacteria 993
46 Ga0105239_13415881 3300010375 Bacteria 516
47 Ga0157369_10414203 3300013105 Bacteria 1397
48 Ga0157374_12120079 3300013296 Bacteria 589
49 Ga0157378_12275719 3300013297 Bacteria 593
50 Ga0163162_10915018 3300013306 Bacteria 990
51 Ga0157375_11623158 3300013308 Bacteria 765
52 Ga0157375_12195771 3300013308 Bacteria 658
53 Ga0163163_10086433 3300014325 Bacteria 3145
54 Ga0157380_10194977 3300014326 Bacteria 1792
55 Ga0157380_11078577 3300014326 Bacteria 841
56 Ga0206353_11758958 3300020082 Bacteria 881
57 Ga0207647_10012942 3300025904 Bacteria 5798
58 Ga0207707_10128973 3300025912 Bacteria 2212
59 Ga0207660_10072031 3300025917 Bacteria 2516
60 Ga0207657_10074664 3300025919 Bacteria 2862
61 Ga0207652_10066075 3300025921 Bacteria 3134
62 Ga0207690_11532097 3300025932 Bacteria 557
63 Ga0207686_10290330 3300025934 Bacteria 1211
64 Ga0207709_10927159 3300025935 Bacteria 709
65 Ga0207669_10077072 3300025937 Bacteria 2119
66 Ga0207704_10570700 3300025938 Bacteria 922
67 Ga0207661_11549715 3300025944 Bacteria 607
68 Ga0207667_11902203 3300025949 Bacteria 557
69 Ga0207640_11436946 3300025981 Bacteria 619
70 Ga0207658_10210997 3300025986 Bacteria 1627
71 Ga0207678_11515787 3300026067 Bacteria 592
72 Ga0207708_10087444 3300026075 Bacteria 2400
73 Ga0207648_12255787 3300026089 Bacteria 505
74 Ga0207676_10412520 3300026095 Bacteria 1265
75 Ga0207676_11275501 3300026095 Bacteria 729
76 Ga0207674_10217159 3300026116 Bacteria 1860
77 Ga0207674_10238112 3300026116 Bacteria 1767
78 Ga0207675_100181137 3300026118 Bacteria 2017
79 Ga0207675_102486666 3300026118 Bacteria 529
80 Ga0207683_11186571 3300026121 Bacteria 708
81 Ga0207683_11648416 3300026121 Bacteria 591
82 Ga0268266_10001168 3300028379 Bacteria 32486
83 Ga0268266_10733752 3300028379 Bacteria 953
84 Ga0268265_11698488 3300028380 Bacteria 637
85 Ga0268264_10342306 3300028381 Bacteria 1421
86 Ga0307408_101337203 3300031548 Bacteria 673
87 Ga0307405_11045875 3300031731 Bacteria 699
88 Ga0307405_11313039 3300031731 Bacteria 630
89 Ga0307413_10285392 3300031824 Bacteria 1244
90 Ga0307413_10734525 3300031824 Bacteria 824
91 Ga0307413_11262750 3300031824 Bacteria 645
92 Ga0307410_11513651 3300031852 Bacteria 591
93 Ga0307410_11691188 3300031852 Bacteria 560
94 Ga0307407_10068502 3300031903 Bacteria 2102
95 Ga0307407_10072177 3300031903 Bacteria 2058
96 Ga0307412_10302618 3300031911 Bacteria 1265
97 Ga0307409_100029286 3300031995 Bacteria 3938
98 Ga0307409_100220216 3300031995 Bacteria 1713
99 Ga0307409_100446063 3300031995 Bacteria 1248
100 Ga0307409_100579184 3300031995 Bacteria 1106
101 Ga0307409_101284090 3300031995 Bacteria 757
102 Ga0307409_102642930 3300031995 Bacteria 530
103 Ga0307416_100504310 3300032002 Bacteria 1275
104 Ga0307416_100890874 3300032002 Bacteria 989
105 Ga0307416_103725626 3300032002 Bacteria 510
106 Ga0307414_10612355 3300032004 Bacteria 978
107 Ga0307414_10696991 3300032004 Bacteria 919
108 Ga0307411_10023401 3300032005 Bacteria 3659
109 Ga0307411_11038313 3300032005 Bacteria 736
110 Ga0307415_100563021 3300032126 Bacteria 1008
111 Ga0307415_100758589 3300032126 Bacteria 882
112 Ga0307415_100887113 3300032126 Bacteria 821
113 Ga0307415_102005802 3300032126 Bacteria 563
114 Ga0373946_0413869 3300035171 Bacteria 682
115 Ga0395899_0234633 3300037312 Bacteria 1265
116 Ga0395900_0025688 3300037418 Bacteria 6030
117 Ga0395900_0073632 3300037418 Bacteria 3512
118 Ga0395898_0060000 3300037466 Bacteria 3698
119 Ga0395905_0825949 3300037471 Bacteria 830
120 Ga0395901_0352255 3300038443 Bacteria 1519
121 Ga0436365_1807217 3300039437 Bacteria 2853
122 Ga0439465_0262376 3300041413 Bacteria 641
123 Ga0451791_1264976 3300041451 Bacteria 1015
124 Ga0451797_0155402 3300041453 Bacteria 995
125 Ga0451843_1124552 3300041509 Bacteria 570
126 Ga0451853_1005258 3300041512 Bacteria 1205
127 Ga0451853_1175330 3300041512 Bacteria 500
128 Ga0451853_2375201 3300041512 Bacteria 570
129 Ga0466969_0087683 3300044656 Bacteria 1478
130 Ga0466972_0117952 3300044658 Bacteria 1252
131 Ga0466966_0060188 3300044684 Bacteria 2397
132 Ga0466961_0074431 3300044693 Bacteria 2153
133 Ga0466963_0025982 3300044694 Bacteria 3741
134 Ga0466963_0039317 3300044694 Bacteria 3097
135 Ga0466963_0160936 3300044694 Bacteria 1562
136 Ga0466971_0018181 3300044719 Bacteria 3113
137 Ga0466971_0233024 3300044719 Bacteria 874
138 Ga0466970_0337667 3300044765 Bacteria 854
139 Ga0466959_0004241 3300045049 Bacteria 9563
140 Ga0466958_0191060 3300045836 Bacteria 1301
141 Ga0466967_0229785 3300045976 Bacteria 1766
142 Ga0466967_0264101 3300045976 Bacteria 1647
143 Ga0466967_0310471 3300045976 Bacteria 1519
144 Ga0495603_0120211 3300046455 Bacteria 1531
145 Ga0495603_0230890 3300046455 Bacteria 1067
146 Ga0495629_0040833 3300046459 Bacteria 3264
147 Ga0495582_0075375 3300046473 Bacteria 1868
148 Ga0495608_0149675 3300046511 Bacteria 1488
149 Ga0495608_0725104 3300046511 Bacteria 590
150 Ga0495652_0697070 3300046529 Bacteria 684
151 Ga0495656_0744880 3300046615 Bacteria 528
152 Ga0495657_0523238 3300046675 Bacteria 690
153 Ga0495658_0074180 3300046683 Bacteria 1982
154 Ga0495674_0742688 3300047319 Bacteria 767
155 Ga0496101_0009135 3300048904 Bacteria 6506
156 Ga0496102_0031707 3300048905 Bacteria 4743
157 Ga0496102_0098023 3300048905 Bacteria 2720
158 Ga0496103_0026487 3300048906 Bacteria 3510
159 Ga0496106_0401023 3300048909 Bacteria 1102
160 Ga0496106_0425700 3300048909 Bacteria 1067
161 Ga0496107_0040831 3300048910 Bacteria 3331
162 Ga0496107_0243676 3300048910 Bacteria 1338
163 Ga0496108_1046167 3300048911 Bacteria 696
164 Ga0496110_0712222 3300048913 Bacteria 906
165 Ga0496113_0075303 3300048916 Bacteria 2576
166 Ga0496114_0048725 3300048917 Bacteria 3524
167 Ga0496114_0925166 3300048917 Bacteria 754
168 Ga0496115_0022401 3300048918 Bacteria 4894
169 Ga0501311_007926 3300049527 Bacteria 1233
170 Ga0501031_0141754 3300049568 Bacteria 1571
171 Ga0501032_0032496 3300049569 Bacteria 3577
172 Ga0501033_0621366 3300049570 Bacteria 740
173 Ga0501039_0009537 3300049575 Bacteria 7399
174 Ga0501039_0168064 3300049575 Bacteria 1724
175 Ga0501039_0782213 3300049575 Bacteria 745
176 Ga0501040_0329704 3300049576 Bacteria 1092
177 Ga0501047_0110183 3300049581 Bacteria 2636
178 Ga0501047_0337358 3300049581 Bacteria 1345
179 Ga0501048_0215586 3300049582 Bacteria 1361
180 Ga0501068_0033141 3300049584 Bacteria 3075
181 Ga0501069_0111338 3300049585 Bacteria 1559
182 Ga0501070_0013917 3300049586 Bacteria 6773
183 Ga0501071_0086630 3300049587 Bacteria 2298
184 Ga0501071_0305169 3300049587 Bacteria 1207
185 Ga0501071_1145696 3300049587 Bacteria 601
186 Ga0501072_0313038 3300049588 Bacteria 1248
187 Ga0501073_0046003 3300049589 Bacteria 3071
188 Ga0501074_0000838 3300049590 Bacteria 19549
189 Ga0501077_0439155 3300049593 Bacteria 835
190 Ga0501079_0110961 3300049741 Bacteria 2131
191 Ga0501083_0014460 3300049744 Bacteria 5519
192 Ga0501035_1362160 3300049822 Bacteria 545
193 nmdc:mga03n38_425116_c1 3300050490 Bacteria 735
194 nmdc:mga06z11_952378_c1 3300050494 Bacteria 523
195 nmdc:mga08y16_1012104_c1 3300050511 Bacteria 810
196 Ga0495595_0374181 3300053084 Bacteria 720
197 Ga0495619_0010703 3300053085 Bacteria 5776
198 Ga0495619_0701489 3300053085 Bacteria 688
199 Ga0501082_1751772 3300060353 Bacteria 542
200 Ga0466962_0006484 3300061719 Bacteria 5617
201 Ga0530510_0303165 3300061734 Bacteria 1196
202 2644114876 2643221620 Bacteria 5134593
203 2644229023 2643221641 Bacteria 4490190
204 2740166883 2739367898 Bacteria 4367674
205 2812332277 2811994874 Bacteria 5367947
206 3003001702 3002998708 Bacteria 11715108
207 8053947367 8053945823 Bacteria 8962862
208 8054612612 8054609563 Bacteria 5170090
209 Ga0070658_10090444
210 LJQas_1005035
211 Ga0070683_101538442
212 Ga0070683_101863338
213 Ga0070680_100089703
214 Ga0070660_100136930
215 Ga0070660_101873986
216 Ga0070674_101601886
217 Ga0070667_100057101
218 Ga0070667_101702248
219 Ga0070714_100070656
220 Ga0070701_10609407
221 Ga0070700_100311982
222 Ga0070700_100332065
223 Ga0070663_101926500
224 Ga0070678_101381854
225 Ga0070681_10022951
226 Ga0070685_11482789
227 Ga0070679_100255369
228 Ga0070684_101023775
229 Ga0070665_100000865
230 Ga0070665_100729914
231 Ga0070665_100760137
232 Ga0068857_100231253
233 Ga0068857_100303176
234 Ga0068857_100758093
235 Ga0068856_101030281
236 Ga0068859_101100039
237 Ga0068864_100918282
238 Ga0068864_101536844
239 Ga0068866_10393076
240 Ga0068861_100047172
241 Ga0068861_100144828
242 Ga0068860_101867614
243 Ga0081539_10192238
244 Ga0075363_100942444
245 Ga0075366_10933051
246 Ga0068865_100660741
247 Ga0097620_101100134
248 Ga0111539_10219058
249 Ga0105243_10762046
250 Ga0105243_11419391
251 Ga0105243_11482964
252 Ga0105242_10317353
253 Ga0105242_10697577
254 Ga0105239_13415881
255 Ga0157369_10414203
256 Ga0157374_12120079
257 Ga0157378_12275719
258 Ga0163162_10915018
259 Ga0157375_11623158
260 Ga0157375_12195771
261 Ga0163163_10086433
262 Ga0157380_10194977
263 Ga0157380_11078577
264 Ga0206353_11758958
265 Ga0207647_10012942
266 Ga0207707_10128973
267 Ga0207660_10072031
268 Ga0207657_10074664
269 Ga0207652_10066075
270 Ga0207690_11532097
271 Ga0207686_10290330
272 Ga0207709_10927159
273 Ga0207669_10077072
274 Ga0207704_10570700
275 Ga0207661_11549715
276 Ga0207667_11902203
277 Ga0207640_11436946
278 Ga0207658_10210997
279 Ga0207678_11515787
280 Ga0207708_10087444
281 Ga0207648_12255787
282 Ga0207676_10412520
283 Ga0207676_11275501
284 Ga0207674_10217159
285 Ga0207674_10238112
286 Ga0207675_100181137
287 Ga0207675_102486666
288 Ga0207683_11186571
289 Ga0207683_11648416
290 Ga0268266_10001168
291 Ga0268266_10733752
292 Ga0268265_11698488
293 Ga0268264_10342306
294 Ga0307408_101337203
295 Ga0307405_11045875
296 Ga0307405_11313039
297 Ga0307413_10285392
298 Ga0307413_10734525
299 Ga0307413_11262750
300 Ga0307410_11513651
301 Ga0307410_11691188
302 Ga0307407_10068502
303 Ga0307407_10072177
304 Ga0307412_10302618
305 Ga0307409_100029286
306 Ga0307409_100220216
307 Ga0307409_100446063
308 Ga0307409_100579184
309 Ga0307409_101284090
310 Ga0307409_102642930
311 Ga0307416_100504310
312 Ga0307416_100890874
313 Ga0307416_103725626
314 Ga0307414_10612355
315 Ga0307414_10696991
316 Ga0307411_10023401
317 Ga0307411_11038313
318 Ga0307415_100563021
319 Ga0307415_100758589
320 Ga0307415_100887113
321 Ga0307415_102005802
322 Ga0373946_0413869
323 Ga0395899_0234633
324 Ga0395900_0025688
325 Ga0395900_0073632
326 Ga0395898_0060000
327 Ga0395905_0825949
328 Ga0395901_0352255
329 Ga0436365_1807217
330 Ga0439465_0262376
331 Ga0451791_1264976
332 Ga0451797_0155402
333 Ga0451843_1124552
334 Ga0451853_1005258
335 Ga0451853_1175330
336 Ga0451853_2375201
337 Ga0466969_0087683
338 Ga0466972_0117952
339 Ga0466966_0060188
340 Ga0466961_0074431
341 Ga0466963_0025982
342 Ga0466963_0039317
343 Ga0466963_0160936
344 Ga0466971_0018181
345 Ga0466971_0233024
346 Ga0466970_0337667
347 Ga0466959_0004241
348 Ga0466958_0191060
349 Ga0466967_0229785
350 Ga0466967_0264101
351 Ga0466967_0310471
352 Ga0495603_0120211
353 Ga0495603_0230890
354 Ga0495629_0040833
355 Ga0495582_0075375
356 Ga0495608_0149675
357 Ga0495608_0725104
358 Ga0495652_0697070
359 Ga0495656_0744880
360 Ga0495657_0523238
361 Ga0495658_0074180
362 Ga0495674_0742688
363 Ga0496101_0009135
364 Ga0496102_0031707
365 Ga0496102_0098023
366 Ga0496103_0026487
367 Ga0496106_0401023
368 Ga0496106_0425700
369 Ga0496107_0040831
370 Ga0496107_0243676
371 Ga0496108_1046167
372 Ga0496110_0712222
373 Ga0496113_0075303
374 Ga0496114_0048725
375 Ga0496114_0925166
376 Ga0496115_0022401
377 Ga0501311_007926
378 Ga0501031_0141754
379 Ga0501032_0032496
380 Ga0501033_0621366
381 Ga0501039_0009537
382 Ga0501039_0168064
383 Ga0501039_0782213
384 Ga0501040_0329704
385 Ga0501047_0110183
386 Ga0501047_0337358
387 Ga0501048_0215586
388 Ga0501068_0033141
389 Ga0501069_0111338
390 Ga0501070_0013917
391 Ga0501071_0086630
392 Ga0501071_0305169
393 Ga0501071_1145696
394 Ga0501072_0313038
395 Ga0501073_0046003
396 Ga0501074_0000838
397 Ga0501077_0439155
398 Ga0501079_0110961
399 Ga0501083_0014460
400 Ga0501035_1362160
401 nmdc:mga03n38_425116_c1
402 nmdc:mga06z11_952378_c1
403 nmdc:mga08y16_1012104_c1
404 Ga0495595_0374181
405 Ga0495619_0010703
406 Ga0495619_0701489
407 Ga0501082_1751772
408 Ga0466962_0006484
409 Ga0530510_0303165
410 2644114876
411 2644229023
412 2740166883
413 2812332277
414 3003001702
415 8053947367
416 8054612612

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05437

AzlD

Branched-chain amino acid transport protein (AzlD)

2

97

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ko2-assembly2.cif.gz_B restraining state of near full-length hsp70 dnak 0.518 34 98
7ko2-assembly2.cif.gz_B restraining state of near full-length hsp70 dnak 0.3863 34 98
6zvr-assembly1.cif.gz_D c11 symmetry: bacterial vipp1 and pspa are members of the ancient escrt-iii membrane-remodeling superfamily. 0.2961 4 98
7o40-assembly1.cif.gz_A structural basis for vipp1 oligomerization and maintenance of thylakoid membrane integrity 0.2937 1 94
7o3x-assembly1.cif.gz_C structural basis for vipp1 oligomerization and maintenance of thylakoid membrane integrity 0.2879 1 97
ID Description Score Start End Superfamily
4r5lD02 Mainly Alpha;Up-down Bundle;Substrate Binding Domain Of Dnak; Chain:A; Domain 2; 0.5603 29 94 1.20.1270.10
3dppA02 Mainly Alpha;Up-down Bundle;Substrate Binding Domain Of Dnak; Chain:A; Domain 2; 0.5517 34 94 1.20.1270.10
4r5gA02 Mainly Alpha;Up-down Bundle;Substrate Binding Domain Of Dnak; Chain:A; Domain 2; 0.5505 29 94 1.20.1270.10
4ezyA02 Mainly Alpha;Up-down Bundle;Substrate Binding Domain Of Dnak; Chain:A; Domain 2; 0.5317 29 94 1.20.1270.10
4r5gA02 Mainly Alpha;Up-down Bundle;Substrate Binding Domain Of Dnak; Chain:A; Domain 2; 0.5024 29 94 1.20.1270.10
ID Description Score Start End GO Terms
AF-A0A7W0NG78-F1-model_v4 deleted 0.7776 1 95
AF-A0A652LPC6-F1-model_v4 deleted 0.7576 2 98
AF-A0A7W0NG78-F1-model_v4 deleted 0.7457 1 95
AF-A0A652LPC6-F1-model_v4 deleted 0.7391 2 98
AF-A0A522VLF3-F1-model_v4 Alpha/beta hydrolase 0.6232 38 94 GO:0016020

Map