F317167

General Info

Members Datasets Scaffolds Average Seq Length
207 165 414 392

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2935760218|2935769572
Length 432
Sequence KRRSAGDDKQAATPALRAHSGSGMKMTSQSPARLIRSLTLTHAVLYGLGVTIGAGIYVLVGAAAARSGMHAPLAFFAAAAVMGMTAGTFAELGTRLPVAASEAAYVQAAFHRKWLGAAAGLLVVAAATISGATISVGSAGYISVFVPLPAAWIIAGVVLAMGAIACLSAVQSISFAGLMTVVEIGGLILIVAGGLFQGGSLLSRLPELWPAPGDLGAWTGVAQTSLLAVFAFIGFEHLVNISEEMKNPLRTLPRALFITLGATALLYAAVVWIAVVAVPPAELARSPAPLALVFQRLTGLPLEVLGAIAIVATVNGIIVHMIMIGRVLYGLADQGSLPPFLSKVNARSGTPVVATLFGVGAILFLALGVPLTGLAEWTSRLTLGIFVVVNLALLRIKATESIPPAGVFLVPNWVPIAGLFTAASLLLIDLIR

Samples

Sample ID Description Type Environment
1 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
2 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
3 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
4 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
5 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
6 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
7 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
8 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
9 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
16 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
17 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
20 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
28 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
29 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
30 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
33 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
34 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
35 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
40 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
41 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
42 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
43 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
44 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
45 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
46 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
47 3300021324 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS4 Metagenome Nodule
48 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
49 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
51 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
52 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
67 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
71 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
72 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
73 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
74 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
75 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
76 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
77 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
78 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
79 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
80 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
81 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
82 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
83 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
84 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
85 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
86 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
87 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
88 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
89 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
90 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
91 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
92 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
93 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
94 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
95 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
96 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
97 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
98 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
99 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
100 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
101 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
102 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
103 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
104 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
105 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
106 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
107 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
108 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
109 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
110 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
111 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
112 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
113 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
114 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
115 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
122 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
123 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
124 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
125 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
126 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
127 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
128 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
129 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
130 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
131 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
132 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
133 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
134 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
135 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
136 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
137 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
138 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
139 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
140 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
141 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
142 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
143 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
144 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
145 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
146 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
147 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
148 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
149 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
150 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
151 2935760218 Bradyrhizobium sp. LA7.1 Isolate Nodule
152 2508501009 Bradyrhizobium sp. WSM471 Isolate Nodule
153 2513237351 Mesorhizobium alhagi CCNWXJ12-2 Isolate Nodule
154 2617270741 Bradyrhizobium yuanmingense CCBAU 10071 Isolate Nodule
155 2765235942 Rhizobium sp. WYCCWR10014 Isolate Nodule
156 2824732956 Bradyrhizobium sp. HAMBI 2153 Isolate Unclassified
157 2824746037 Bradyrhizobium sp. HAMBI 2299 Isolate Unclassified
158 2842110456 Rhizobium esperanzae SEMIA 414 Isolate Nodule
159 2881364244 Bradyrhizobium sp. RP6 Isolate Unclassified
160 2888388044 Bradyrhizobium cosmicum 58S1 Isolate Unclassified
161 2889033259 Bradyrhizobium sp. CCBAU 051011 Isolate Unclassified
162 2908775508 Bradyrhizobium sp. SUTN9-2 Isolate Unclassified
163 2933586486 Rhizobium leguminosarum SEMIA 4039 Isolate Nodule
164 3005506211 Bradyrhizobium diazoefficiens SZCCT0449 Isolate Unclassified
165 8018127388 Rhizobium aegyptiacum 950 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 92.75
Metatranscriptomes 0
Isolates 7.25

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.59
Nodule 5.8
Rhizoplane 6.28
Rhizosphere 69.08
Stem 0
Stem Tuber 0
Unclassified 4.83

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25153J46596_10015339 3300003215 Bacteria 3126
2 Ga0070680_100005718 3300005336 Bacteria 9433
3 Ga0070661_100040259 3300005344 Bacteria 3409
4 Ga0070668_100120496 3300005347 Bacteria 2096
5 Ga0070674_100248845 3300005356 Bacteria 1395
6 Ga0070703_10010333 3300005406 Bacteria 2630
7 Ga0070701_10008996 3300005438 Bacteria 4354
8 Ga0070700_100001269 3300005441 Bacteria 12511
9 Ga0070694_100002877 3300005444 Bacteria 10227
10 Ga0070708_100002831 3300005445 Bacteria 13475
11 Ga0070663_100020065 3300005455 Bacteria 4419
12 Ga0070663_100062185 3300005455 Bacteria 2690
13 Ga0070663_100066518 3300005455 Bacteria 2611
14 Ga0070681_10051442 3300005458 Bacteria 4109
15 Ga0070706_100060095 3300005467 Bacteria 3508
16 Ga0070699_100004759 3300005518 Bacteria 12000
17 Ga0068853_100020116 3300005539 Bacteria 5549
18 Ga0070695_100000709 3300005545 Bacteria 17793
19 Ga0070696_100000030 3300005546 Bacteria 65862
20 Ga0070665_100061717 3300005548 Bacteria 3758
21 Ga0070704_100002078 3300005549 Bacteria 11129
22 Ga0070664_100087444 3300005564 Bacteria 2694
23 Ga0070664_100103779 3300005564 Bacteria 2475
24 Ga0068857_100003014 3300005577 Bacteria 13908
25 Ga0068859_100008473 3300005617 Bacteria 10406
26 Ga0068861_100037157 3300005719 Bacteria 3620
27 Ga0068858_100100804 3300005842 Bacteria 2693
28 Ga0068860_100033160 3300005843 Bacteria 4957
29 Ga0068862_100001754 3300005844 Bacteria 19637
30 Ga0075365_10001195 3300006038 Bacteria 11436
31 Ga0075363_100009372 3300006048 Bacteria 4601
32 Ga0075364_10007487 3300006051 Bacteria 6489
33 Ga0075364_10031090 3300006051 Bacteria 3430
34 Ga0075367_10007457 3300006178 Bacteria 5602
35 Ga0075367_10011680 3300006178 Bacteria 4659
36 Ga0075367_10012147 3300006178 Bacteria 4581
37 Ga0075367_10016157 3300006178 Bacteria 4073
38 Ga0075428_100104907 3300006844 Bacteria 3082
39 Ga0075431_100003896 3300006847 Bacteria 14523
40 Ga0075431_100353251 3300006847 Bacteria 1477
41 Ga0075433_10001366 3300006852 Bacteria 17911
42 Ga0075429_100024762 3300006880 Bacteria 5209
43 Ga0097620_100008473 3300006931 Bacteria 10406
44 Ga0075435_100010483 3300007076 Bacteria 6780
45 Ga0111539_10019933 3300009094 Bacteria 8260
46 Ga0111539_10187278 3300009094 Bacteria 2416
47 Ga0111539_10227247 3300009094 Unclassified 2173
48 Ga0114129_10062322 3300009147 Bacteria 5210
49 Ga0114129_10141517 3300009147 Bacteria 3297
50 Ga0114129_10472974 3300009147 Bacteria 1641
51 Ga0105238_10116736 3300009551 Bacteria 2649
52 Ga0105249_10001814 3300009553 Bacteria 18579
53 Ga0105239_10582165 3300010375 Bacteria 1276
54 Ga0157369_10005181 3300013105 Bacteria 15245
55 Ga0157378_10372278 3300013297 Bacteria 1401
56 Ga0163163_10114968 3300014325 Bacteria 2722
57 Ga0214544_1000005 3300021320 Bacteria 387675
58 Ga0214542_1000004 3300021321 Bacteria 415597
59 Ga0214545_1000005 3300021324 Bacteria 415590
60 Ga0214543_1000111 3300021327 Bacteria 106517
61 Ga0209677_101374 3300025253 Bacteria 10588
62 Ga0209025_1037878 3300025294 Bacteria 2131
63 Ga0209758_1006470 3300025297 Bacteria 8393
64 Ga0207653_10001195 3300025885 Bacteria 8477
65 Ga0207684_10211765 3300025910 Bacteria 1672
66 Ga0207707_10006866 3300025912 Bacteria 9928
67 Ga0207660_10056658 3300025917 Bacteria 2805
68 Ga0207649_10030676 3300025920 Bacteria 3187
69 Ga0207661_10008854 3300025944 Bacteria 7203
70 Ga0207679_10124780 3300025945 Bacteria 2056
71 Ga0207712_10000667 3300025961 Bacteria 26651
72 Ga0207639_10069101 3300026041 Bacteria 2755
73 Ga0207678_10016828 3300026067 Bacteria 6421
74 Ga0207678_10034451 3300026067 Bacteria 4410
75 Ga0207678_10090802 3300026067 Bacteria 2611
76 Ga0207678_10099421 3300026067 Bacteria 2485
77 Ga0207708_10000321 3300026075 Bacteria 37920
78 Ga0207674_10003346 3300026116 Bacteria 19677
79 Ga0207675_100055804 3300026118 Bacteria 3686
80 Ga0207683_10180400 3300026121 Bacteria 1914
81 Ga0207428_10030198 3300027907 Unclassified 4483
82 Ga0268266_10087036 3300028379 Bacteria 2732
83 Ga0268266_10177259 3300028379 Bacteria 1938
84 Ga0268265_10002287 3300028380 Bacteria 14581
85 Ga0268264_10024135 3300028381 Bacteria 4963
86 Ga0265337_1001035 3300028556 Bacteria 14440
87 Ga0265326_10003934 3300028558 Bacteria 4821
88 Ga0265319_1005274 3300028563 Bacteria 6225
89 Ga0265334_10000701 3300028573 Bacteria 16804
90 Ga0265318_10002584 3300028577 Bacteria 9584
91 Ga0265323_10000238 3300028653 Bacteria 32605
92 Ga0265322_10001908 3300028654 Bacteria 6595
93 Ga0265336_10000074 3300028666 Bacteria 82727
94 Ga0265338_10000137 3300028800 Bacteria 135705
95 Ga0265324_10001894 3300029957 Bacteria 11266
96 Ga0307509_10127183 3300031507 Bacteria 2512
97 Ga0265342_10008351 3300031712 Bacteria 7435
98 Ga0307413_10046635 3300031824 Bacteria 2579
99 Ga0373939_0005345 3300035114 Unclassified 3056
100 Ga0316574_0000388 3300035398 Bacteria 17161
101 Ga0373931_0009540 3300035691 Bacteria 4641
102 Ga0373947_0022371 3300035725 Bacteria 3667
103 Ga0451855_1440579 3300041511 Bacteria 5118
104 Ga0495629_0003129 3300046459 Bacteria 12551
105 Ga0495652_0029847 3300046529 Bacteria 4786
106 Ga0495640_0050175 3300046533 Bacteria 2876
107 Ga0495640_0142636 3300046533 Bacteria 1544
108 Ga0495634_0093712 3300046642 Bacteria 1947
109 Ga0495635_0002675 3300046663 Bacteria 12179
110 Ga0495588_0056340 3300046674 Bacteria 2029
111 Ga0495657_0026538 3300046675 Bacteria 4101
112 Ga0495646_0062087 3300046680 Bacteria 2223
113 Ga0495613_0134154 3300046689 Bacteria 1772
114 Ga0495624_0111073 3300046690 Bacteria 1685
115 Ga0495600_0003575 3300046809 Bacteria 9150
116 Ga0495604_0007981 3300047317 Bacteria 8383
117 Ga0495593_0020402 3300047673 Bacteria 3712
118 Ga0496102_0000455 3300048905 Bacteria 46123
119 Ga0496102_0095548 3300048905 Bacteria 2755
120 Ga0496104_0000655 3300048907 Bacteria 29719
121 Ga0496104_0001785 3300048907 Bacteria 18633
122 Ga0496105_0006581 3300048908 Bacteria 8942
123 Ga0496105_0008079 3300048908 Bacteria 8181
124 Ga0496106_0000219 3300048909 Bacteria 39803
125 Ga0496108_0001306 3300048911 Bacteria 19608
126 Ga0496110_0004629 3300048913 Bacteria 10687
127 Ga0496111_0061204 3300048914 Bacteria 2729
128 Ga0496112_0000014 3300048915 Bacteria 210932
129 Ga0496113_0013207 3300048916 Bacteria 5583
130 Ga0496113_0030652 3300048916 Bacteria 3895
131 Ga0496116_0014228 3300048919 Bacteria 6367
132 Ga0496118_0005292 3300048921 Bacteria 14728
133 Ga0496118_0039442 3300048921 Bacteria 3768
134 Ga0496119_0005077 3300048922 Bacteria 12779
135 Ga0496120_0004945 3300048923 Bacteria 10829
136 Ga0496125_0094312 3300048928 Bacteria 2230
137 Ga0501038_0029389 3300049574 Bacteria 4871
138 Ga0501038_0046207 3300049574 Bacteria 3776
139 Ga0501039_0072990 3300049575 Bacteria 2667
140 Ga0501039_0252379 3300049575 Bacteria 1387
141 Ga0501039_0280970 3300049575 Bacteria 1309
142 Ga0501041_0008119 3300049577 Bacteria 6181
143 Ga0501043_0124075 3300049579 Bacteria 2025
144 Ga0501046_0083678 3300049580 Bacteria 2462
145 Ga0501048_0054741 3300049582 Bacteria 2834
146 Ga0501071_0160498 3300049587 Bacteria 1680
147 Ga0501072_0037088 3300049588 Bacteria 3824
148 Ga0501075_0034268 3300049591 Bacteria 3780
149 Ga0501075_0180438 3300049591 Unclassified 1611
150 Ga0501076_0046894 3300049592 Bacteria 3415
151 Ga0501077_0111113 3300049593 Bacteria 1737
152 Ga0501257_008848 3300049686 Bacteria 2267
153 Ga0501079_0003140 3300049741 Bacteria 12104
154 Ga0501079_0026926 3300049741 Bacteria 4409
155 Ga0501080_0041877 3300049742 Bacteria 4266
156 Ga0501080_0351757 3300049742 Unclassified 1330
157 Ga0501081_0010129 3300049743 Bacteria 6151
158 Ga0501081_0018200 3300049743 Bacteria 4664
159 Ga0501081_0153835 3300049743 Unclassified 1654
160 Ga0501083_0132339 3300049744 Unclassified 1635
161 Ga0501045_0011506 3300049824 Bacteria 6214
162 Ga0501045_0014417 3300049824 Bacteria 5601
163 Ga0501045_0099214 3300049824 Bacteria 2155
164 nmdc:mga03n38_18641_c1 3300050490 Bacteria 2744
165 nmdc:mga00v17_6696_c1 3300050491 Bacteria 6121
166 nmdc:mga00v17_68760_c1 3300050491 Bacteria 2190
167 nmdc:mga0yw44_48101_c1 3300050492 Bacteria 2571
168 nmdc:mga06z11_13381_c1 3300050494 Bacteria 3601
169 nmdc:mga06z11_138_c1 3300050494 Bacteria 28781
170 nmdc:mga06z11_2891_c1 3300050494 Bacteria 6605
171 nmdc:mga04h51_22584_c1 3300050495 Bacteria 1905
172 nmdc:mga05p37_231637_c1 3300050507 Bacteria 2225
173 nmdc:mga05p37_336909_c1 3300050507 Bacteria 1780
174 nmdc:mga09592_170881_c1 3300050508 Bacteria 1880
175 nmdc:mga06r32_3451_c1 3300050510 Bacteria 14127
176 nmdc:mga06r32_67043_c1 3300050510 Bacteria 3464
177 nmdc:mga08y16_114625_c1 3300050511 Bacteria 2806
178 nmdc:mga08y16_26980_c1 3300050511 Bacteria 6054
179 nmdc:mga08y16_318767_c1 3300050511 Bacteria 1601
180 nmdc:mga0n895_5632_c1 3300050512 Bacteria 10498
181 nmdc:mga0rr50_51928_c1 3300050513 Unclassified 3044
182 nmdc:mga0a205_2698_c1 3300050515 Bacteria 15688
183 Ga0495619_0108602 3300053085 Bacteria 1894
184 Ga0500566_0000678 3300053094 Bacteria 19108
185 Ga0500658_0034752 3300053134 Bacteria 1992
186 Ga0500559_0000617 3300053136 Bacteria 24108
187 Ga0500559_0014479 3300053136 Bacteria 3333
188 Ga0501084_0002398 3300054114 Bacteria 15073
189 Ga0501082_0075377 3300060353 Unclassified 2907
190 Ga0530510_0014445 3300061734 Bacteria 5568
191 Ga0530510_0054208 3300061734 Bacteria 2898
192 Ga0530510_0118718 3300061734 Unclassified 1941
193 2935769572 2935760218 Bacteria 9817913
194 2508539773 2508501009 Bacteria 7784016
195 2514589628 2513237351 Bacteria 6968952
196 2617374922 2617270741 Bacteria 8201522
197 2766069187 2765235942 Bacteria 7445910
198 2824738514 2824732956 Bacteria 7810675
199 2824752516 2824746037 Bacteria 7911610
200 2842111465 2842110456 Bacteria 7656360
201 2881369399 2881364244 Bacteria 7710352
202 2888392529 2888388044 Bacteria 7304136
203 2889038949 2889033259 Bacteria 9099371
204 2908777407 2908775508 Bacteria 8092255
205 2933588019 2933586486 Bacteria 7667493
206 3005511101 3005506211 Bacteria 6943378
207 8018128396 8018127388 Bacteria 7351159
208 JGI25153J46596_10015339
209 Ga0070680_100005718
210 Ga0070661_100040259
211 Ga0070668_100120496
212 Ga0070674_100248845
213 Ga0070703_10010333
214 Ga0070701_10008996
215 Ga0070700_100001269
216 Ga0070694_100002877
217 Ga0070708_100002831
218 Ga0070663_100020065
219 Ga0070663_100062185
220 Ga0070663_100066518
221 Ga0070681_10051442
222 Ga0070706_100060095
223 Ga0070699_100004759
224 Ga0068853_100020116
225 Ga0070695_100000709
226 Ga0070696_100000030
227 Ga0070665_100061717
228 Ga0070704_100002078
229 Ga0070664_100087444
230 Ga0070664_100103779
231 Ga0068857_100003014
232 Ga0068859_100008473
233 Ga0068861_100037157
234 Ga0068858_100100804
235 Ga0068860_100033160
236 Ga0068862_100001754
237 Ga0075365_10001195
238 Ga0075363_100009372
239 Ga0075364_10007487
240 Ga0075364_10031090
241 Ga0075367_10007457
242 Ga0075367_10011680
243 Ga0075367_10012147
244 Ga0075367_10016157
245 Ga0075428_100104907
246 Ga0075431_100003896
247 Ga0075431_100353251
248 Ga0075433_10001366
249 Ga0075429_100024762
250 Ga0097620_100008473
251 Ga0075435_100010483
252 Ga0111539_10019933
253 Ga0111539_10187278
254 Ga0111539_10227247
255 Ga0114129_10062322
256 Ga0114129_10141517
257 Ga0114129_10472974
258 Ga0105238_10116736
259 Ga0105249_10001814
260 Ga0105239_10582165
261 Ga0157369_10005181
262 Ga0157378_10372278
263 Ga0163163_10114968
264 Ga0214544_1000005
265 Ga0214542_1000004
266 Ga0214545_1000005
267 Ga0214543_1000111
268 Ga0209677_101374
269 Ga0209025_1037878
270 Ga0209758_1006470
271 Ga0207653_10001195
272 Ga0207684_10211765
273 Ga0207707_10006866
274 Ga0207660_10056658
275 Ga0207649_10030676
276 Ga0207661_10008854
277 Ga0207679_10124780
278 Ga0207712_10000667
279 Ga0207639_10069101
280 Ga0207678_10016828
281 Ga0207678_10034451
282 Ga0207678_10090802
283 Ga0207678_10099421
284 Ga0207708_10000321
285 Ga0207674_10003346
286 Ga0207675_100055804
287 Ga0207683_10180400
288 Ga0207428_10030198
289 Ga0268266_10087036
290 Ga0268266_10177259
291 Ga0268265_10002287
292 Ga0268264_10024135
293 Ga0265337_1001035
294 Ga0265326_10003934
295 Ga0265319_1005274
296 Ga0265334_10000701
297 Ga0265318_10002584
298 Ga0265323_10000238
299 Ga0265322_10001908
300 Ga0265336_10000074
301 Ga0265338_10000137
302 Ga0265324_10001894
303 Ga0307509_10127183
304 Ga0265342_10008351
305 Ga0307413_10046635
306 Ga0373939_0005345
307 Ga0316574_0000388
308 Ga0373931_0009540
309 Ga0373947_0022371
310 Ga0451855_1440579
311 Ga0495629_0003129
312 Ga0495652_0029847
313 Ga0495640_0050175
314 Ga0495640_0142636
315 Ga0495634_0093712
316 Ga0495635_0002675
317 Ga0495588_0056340
318 Ga0495657_0026538
319 Ga0495646_0062087
320 Ga0495613_0134154
321 Ga0495624_0111073
322 Ga0495600_0003575
323 Ga0495604_0007981
324 Ga0495593_0020402
325 Ga0496102_0000455
326 Ga0496102_0095548
327 Ga0496104_0000655
328 Ga0496104_0001785
329 Ga0496105_0006581
330 Ga0496105_0008079
331 Ga0496106_0000219
332 Ga0496108_0001306
333 Ga0496110_0004629
334 Ga0496111_0061204
335 Ga0496112_0000014
336 Ga0496113_0013207
337 Ga0496113_0030652
338 Ga0496116_0014228
339 Ga0496118_0005292
340 Ga0496118_0039442
341 Ga0496119_0005077
342 Ga0496120_0004945
343 Ga0496125_0094312
344 Ga0501038_0029389
345 Ga0501038_0046207
346 Ga0501039_0072990
347 Ga0501039_0252379
348 Ga0501039_0280970
349 Ga0501041_0008119
350 Ga0501043_0124075
351 Ga0501046_0083678
352 Ga0501048_0054741
353 Ga0501071_0160498
354 Ga0501072_0037088
355 Ga0501075_0034268
356 Ga0501075_0180438
357 Ga0501076_0046894
358 Ga0501077_0111113
359 Ga0501257_008848
360 Ga0501079_0003140
361 Ga0501079_0026926
362 Ga0501080_0041877
363 Ga0501080_0351757
364 Ga0501081_0010129
365 Ga0501081_0018200
366 Ga0501081_0153835
367 Ga0501083_0132339
368 Ga0501045_0011506
369 Ga0501045_0014417
370 Ga0501045_0099214
371 nmdc:mga03n38_18641_c1
372 nmdc:mga00v17_6696_c1
373 nmdc:mga00v17_68760_c1
374 nmdc:mga0yw44_48101_c1
375 nmdc:mga06z11_13381_c1
376 nmdc:mga06z11_138_c1
377 nmdc:mga06z11_2891_c1
378 nmdc:mga04h51_22584_c1
379 nmdc:mga05p37_231637_c1
380 nmdc:mga05p37_336909_c1
381 nmdc:mga09592_170881_c1
382 nmdc:mga06r32_3451_c1
383 nmdc:mga06r32_67043_c1
384 nmdc:mga08y16_114625_c1
385 nmdc:mga08y16_26980_c1
386 nmdc:mga08y16_318767_c1
387 nmdc:mga0n895_5632_c1
388 nmdc:mga0rr50_51928_c1
389 nmdc:mga0a205_2698_c1
390 Ga0495619_0108602
391 Ga0500566_0000678
392 Ga0500658_0034752
393 Ga0500559_0000617
394 Ga0500559_0014479
395 Ga0501084_0002398
396 Ga0501082_0075377
397 Ga0530510_0014445
398 Ga0530510_0054208
399 Ga0530510_0118718
400 2935769572
401 2508539773
402 2514589628
403 2617374922
404 2766069187
405 2824738514
406 2824752516
407 2842111465
408 2881369399
409 2888392529
410 2889038949
411 2908777407
412 2933588019
413 3005511101
414 8018128396

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13520

AA_permease_2

Amino acid permease

38

430

0.77

PF00324

AA_permease

Amino acid permease

42

423

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
8a6l-assembly1.cif.gz_B human 4f2hc-lat2 heterodimeric amino acid transporter in complex with anticalin d11vs 0.875 21 408
6f34-assembly1.cif.gz_A crystal structure of a bacterial cationic amino acid transporter (cat) homologue bound to arginine. 0.865 15 403
5oqt-assembly1.cif.gz_A crystal structure of a bacterial cationic amino acid transporter (cat) homologue 0.8626 15 403
6li9-assembly1.cif.gz_B heteromeric amino acid transporter b0,+at-rbat complex bound with arginine 0.8526 19 408
6f2g-assembly1.cif.gz_A bacterial asc transporter crystal structure in open to in conformation 0.8523 21 408
ID Description Score Start End Superfamily
af_Q8IR48_79_518_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.9204 15 405 1.20.1740.10
af_P71892_30_474_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.9043 15 403 1.20.1740.10
af_P0AAE2_5_456_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8977 15 403 1.20.1740.10
af_Q50E62_26_473_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8963 15 406 1.20.1740.10
af_Q4DQR3_170_606_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8891 17 406 1.20.1740.10
ID Description Score Start End GO Terms
AF-A0A7Y2AAZ0-F1-model_v4 Amino acid permease 0.9662 65 406 GO:0016020
GO:0055085
AF-A0A4Q3WTX8-F1-model_v4 Amino acid permease 0.9621 27 406 GO:0016020
GO:0022857
AF-A0A6I1JB40-F1-model_v4 Putative amino acid permease 0.9518 79 408 GO:0005886
GO:0022857
AF-A0A523KFK6-F1-model_v4 Amino acid permease 0.951 53 404 GO:0015171
GO:0016020
AF-A0A812ZDW2-F1-model_v4 deleted 0.9463 11 397

Map