F316108
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 207 | 136 | 207 | 325 |
Family's Representative Sequence
| Representative Sequence | 3300005435|Ga0070714_100016139|Ga0070714_1000161393 |
| Length | 343 |
| Sequence | VSPSPRRVVVLGGGRSSEHDVSLASAASVRAGLERGGHDVVAVEISRAGAWACDGEPVALTPGAGLLDADAVFPVLHGPFGEDGTVQGLLECLDVPYVGSGVLASAACMDKVVAKELLARAGLPQVDYRAVRHARWAGAPEAVLDELTALGLPVFVKPARLGSSVGIVRVTEPDELADALETAFAHDPLVIVEAAASGLEIECAVLGNDEPAASEPGEIVLTRAAADGGVADGWYDYEAKYTPGGMELIVPARIPAALASQVRALAVDAFAALGCAGLARADFFVDAGSGAVLVNELNTMPGFTETSVYGKLWAASGVPYEELLSRLVELAIERHARERAYQF |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 2 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 3 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 4 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 6 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 9 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Metagenome | Rhizosphere |
| 11 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 14 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 15 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 16 | 3300005981 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 | Metagenome | Rhizosphere |
| 17 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 18 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 20 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 21 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 22 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 23 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 24 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 25 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 26 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 27 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 28 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 29 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 30 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 31 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 32 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 33 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 34 | 3300021358 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 | Metagenome | Rhizosphere |
| 35 | 3300021377 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 | Metagenome | Unclassified |
| 36 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 37 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 38 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 51 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300028573 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG | Metagenome | Rhizosphere |
| 53 | 3300028666 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG | Metagenome | Rhizosphere |
| 54 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 55 | 3300029957 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG | Metagenome | Rhizosphere |
| 56 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 57 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 58 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 59 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 60 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 61 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 62 | 3300035118 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 | Metagenome | Rhizosphere |
| 63 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 64 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 65 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 66 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 67 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 68 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 69 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 70 | 3300039453 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 | Metagenome | Rhizosphere |
| 71 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 72 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 73 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 74 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 75 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 76 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 77 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 78 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 79 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 80 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 81 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 82 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300046461 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 92 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 93 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 94 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 95 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 96 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 97 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 98 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 99 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 100 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 101 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 102 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 103 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 104 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 105 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 106 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 107 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 108 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 109 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 110 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 111 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 112 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 113 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 114 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 115 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 116 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 117 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 118 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 119 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 120 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 121 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 122 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 123 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 124 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 125 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 126 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 127 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 128 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 129 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 130 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 131 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
| 132 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 133 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 134 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 135 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 136 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 100 |
| Metatranscriptomes | 0 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 2.42 |
| Nodule | 0 |
| Rhizoplane | 9.66 |
| Rhizosphere | 77.29 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 10.63 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25406J46586_10002913 | 3300003203 | Bacteria | 8070 |
| 2 | Ga0070683_100025292 | 3300005329 | Bacteria | 5330 |
| 3 | Ga0068868_100093589 | 3300005338 | Bacteria | 2423 |
| 4 | Ga0070669_100058735 | 3300005353 | Bacteria | 2823 |
| 5 | Ga0070688_100000070 | 3300005365 | Bacteria | 50587 |
| 6 | Ga0070688_100117471 | 3300005365 | Bacteria | 1777 |
| 7 | Ga0070659_100000002 | 3300005366 | Bacteria | 369239 |
| 8 | Ga0070714_100016139 | 3300005435 | Bacteria | 6024 |
| 9 | Ga0070714_100066026 | 3300005435 | Bacteria | 3118 |
| 10 | Ga0070714_100094302 | 3300005435 | Bacteria | 2627 |
| 11 | Ga0070710_10000007 | 3300005437 | Bacteria | 215320 |
| 12 | Ga0070710_10003066 | 3300005437 | Bacteria | 7945 |
| 13 | Ga0070711_100020302 | 3300005439 | Bacteria | 4280 |
| 14 | Ga0070686_100026662 | 3300005544 | Bacteria | 3490 |
| 15 | Ga0070696_100044294 | 3300005546 | Bacteria | 3081 |
| 16 | Ga0070665_100109987 | 3300005548 | Bacteria | 2758 |
| 17 | Ga0070704_100006753 | 3300005549 | Bacteria | 6791 |
| 18 | Ga0068852_100260518 | 3300005616 | Bacteria | 1665 |
| 19 | Ga0081455_10005351 | 3300005937 | Bacteria | 14099 |
| 20 | Ga0081455_10079775 | 3300005937 | Bacteria | 2686 |
| 21 | Ga0081538_10003031 | 3300005981 | Bacteria | 16000 |
| 22 | Ga0081538_10073423 | 3300005981 | Bacteria | 1869 |
| 23 | Ga0081539_10005320 | 3300005985 | Bacteria | 13218 |
| 24 | Ga0070717_10000024 | 3300006028 | Bacteria | 158890 |
| 25 | Ga0070717_10049215 | 3300006028 | Bacteria | 3459 |
| 26 | Ga0075365_10021270 | 3300006038 | Bacteria | 4044 |
| 27 | Ga0075364_10024394 | 3300006051 | Bacteria | 3840 |
| 28 | Ga0070712_100000072 | 3300006175 | Bacteria | 51993 |
| 29 | Ga0070712_100001886 | 3300006175 | Bacteria | 12785 |
| 30 | Ga0070712_100013421 | 3300006175 | Bacteria | 5236 |
| 31 | Ga0075367_10195764 | 3300006178 | Bacteria | 1262 |
| 32 | Ga0075428_100014427 | 3300006844 | Bacteria | 8778 |
| 33 | Ga0075431_100025555 | 3300006847 | Bacteria | 6054 |
| 34 | Ga0075431_100026823 | 3300006847 | Bacteria | 5908 |
| 35 | Ga0075431_100118077 | 3300006847 | Bacteria | 2737 |
| 36 | Ga0075435_100025699 | 3300007076 | Bacteria | 4586 |
| 37 | Ga0111539_10054422 | 3300009094 | Bacteria | 4761 |
| 38 | Ga0105245_10000476 | 3300009098 | Bacteria | 36689 |
| 39 | Ga0105245_10594831 | 3300009098 | Bacteria | 1132 |
| 40 | Ga0114129_10084395 | 3300009147 | Bacteria | 4410 |
| 41 | Ga0114129_10356043 | 3300009147 | Bacteria | 1938 |
| 42 | Ga0105243_10066886 | 3300009148 | Bacteria | 2891 |
| 43 | Ga0105248_10561118 | 3300009177 | Bacteria | 1288 |
| 44 | Ga0105249_10196172 | 3300009553 | Bacteria | 1973 |
| 45 | Ga0157380_10000576 | 3300014326 | Bacteria | 22586 |
| 46 | Ga0157376_10090886 | 3300014969 | Bacteria | 2643 |
| 47 | Ga0213873_10004648 | 3300021358 | Bacteria | 2579 |
| 48 | Ga0213874_10003831 | 3300021377 | Bacteria | 3379 |
| 49 | Ga0213876_10005925 | 3300021384 | Bacteria | 6677 |
| 50 | Ga0213876_10007770 | 3300021384 | Bacteria | 5821 |
| 51 | Ga0213876_10048120 | 3300021384 | Bacteria | 2253 |
| 52 | Ga0213875_10009175 | 3300021388 | Bacteria | 5020 |
| 53 | Ga0213875_10044719 | 3300021388 | Bacteria | 2079 |
| 54 | Ga0213875_10075567 | 3300021388 | Bacteria | 1572 |
| 55 | Ga0207692_10000001 | 3300025898 | Bacteria | 558345 |
| 56 | Ga0207693_10000001 | 3300025915 | Bacteria | 469535 |
| 57 | Ga0207693_10001133 | 3300025915 | Bacteria | 23878 |
| 58 | Ga0207693_10003371 | 3300025915 | Bacteria | 13645 |
| 59 | Ga0207681_10034521 | 3300025923 | Bacteria | 3326 |
| 60 | Ga0207687_10029707 | 3300025927 | Bacteria | 3678 |
| 61 | Ga0207700_10189303 | 3300025928 | Bacteria | 1728 |
| 62 | Ga0207664_10012512 | 3300025929 | Bacteria | 6071 |
| 63 | Ga0207664_10391277 | 3300025929 | Bacteria | 1235 |
| 64 | Ga0207690_10000024 | 3300025932 | Bacteria | 194416 |
| 65 | Ga0207661_10029463 | 3300025944 | Bacteria | 4216 |
| 66 | Ga0207708_10132464 | 3300026075 | Bacteria | 1950 |
| 67 | Ga0207675_100337810 | 3300026118 | Bacteria | 1474 |
| 68 | Ga0207683_10178712 | 3300026121 | Bacteria | 1924 |
| 69 | Ga0207698_10303499 | 3300026142 | Bacteria | 1487 |
| 70 | Ga0207428_10008773 | 3300027907 | Bacteria | 9117 |
| 71 | Ga0268266_10057247 | 3300028379 | Bacteria | 3354 |
| 72 | Ga0265334_10000512 | 3300028573 | Bacteria | 19858 |
| 73 | Ga0265336_10003233 | 3300028666 | Bacteria | 6461 |
| 74 | Ga0265338_10004903 | 3300028800 | Bacteria | 17808 |
| 75 | Ga0265324_10005384 | 3300029957 | Bacteria | 5538 |
| 76 | Ga0307413_10025151 | 3300031824 | Bacteria | 3259 |
| 77 | Ga0307413_10206259 | 3300031824 | Bacteria | 1424 |
| 78 | Ga0307407_10214708 | 3300031903 | Bacteria | 1297 |
| 79 | Ga0307409_100023359 | 3300031995 | Bacteria | 4283 |
| 80 | Ga0307416_100026261 | 3300032002 | Bacteria | 4288 |
| 81 | Ga0307414_10068312 | 3300032004 | Bacteria | 2550 |
| 82 | Ga0307415_100011777 | 3300032126 | Bacteria | 5024 |
| 83 | Ga0373954_0119166 | 3300035118 | Bacteria | 1280 |
| 84 | Ga0373927_0118182 | 3300035695 | Bacteria | 1730 |
| 85 | Ga0373933_0020750 | 3300035724 | Bacteria | 3725 |
| 86 | Ga0373937_0042122 | 3300036401 | Bacteria | 4166 |
| 87 | Ga0395898_0006386 | 3300037466 | Bacteria | 12594 |
| 88 | Ga0436364_0484761 | 3300037853 | Bacteria | 4448 |
| 89 | Ga0436364_0786383 | 3300037853 | Bacteria | 20074 |
| 90 | Ga0436364_0847212 | 3300037853 | Bacteria | 10568 |
| 91 | Ga0436364_0971041 | 3300037853 | Bacteria | 2772 |
| 92 | Ga0436364_1195511 | 3300037853 | Bacteria | 4266 |
| 93 | Ga0436364_1220154 | 3300037853 | Bacteria | 2069 |
| 94 | Ga0436364_1407419 | 3300037853 | Bacteria | 2036 |
| 95 | Ga0436365_0139334 | 3300039437 | Bacteria | 20892 |
| 96 | Ga0436365_0517533 | 3300039437 | Bacteria | 8798 |
| 97 | Ga0436365_0577470 | 3300039437 | Bacteria | 4565 |
| 98 | Ga0436365_1006497 | 3300039437 | Bacteria | 1073 |
| 99 | Ga0436365_1176627 | 3300039437 | Bacteria | 6643 |
| 100 | Ga0436365_1481590 | 3300039437 | Bacteria | 8837 |
| 101 | Ga0436363_0655245 | 3300039450 | Bacteria | 1720 |
| 102 | Ga0436363_1045753 | 3300039450 | Bacteria | 64108 |
| 103 | Ga0436362_0214714 | 3300039453 | Bacteria | 1540 |
| 104 | Ga0436362_0298490 | 3300039453 | Bacteria | 4108 |
| 105 | Ga0466965_0176781 | 3300044683 | Bacteria | 1125 |
| 106 | Ga0466961_0002042 | 3300044693 | Bacteria | 12564 |
| 107 | Ga0466961_0042069 | 3300044693 | Bacteria | 2929 |
| 108 | Ga0466963_0002063 | 3300044694 | Bacteria | 11085 |
| 109 | Ga0466963_0105426 | 3300044694 | Bacteria | 1932 |
| 110 | Ga0466971_0006134 | 3300044719 | Bacteria | 5226 |
| 111 | Ga0466971_0072466 | 3300044719 | Bacteria | 1565 |
| 112 | Ga0466968_0062419 | 3300044735 | Bacteria | 1609 |
| 113 | Ga0466970_0133567 | 3300044765 | Bacteria | 1364 |
| 114 | Ga0466957_0066855 | 3300044842 | Bacteria | 2217 |
| 115 | Ga0466960_0056868 | 3300044901 | Bacteria | 1906 |
| 116 | Ga0466959_0001382 | 3300045049 | Bacteria | 14823 |
| 117 | Ga0466959_0027354 | 3300045049 | Bacteria | 4231 |
| 118 | Ga0466959_0065733 | 3300045049 | Bacteria | 2632 |
| 119 | Ga0466959_0098227 | 3300045049 | Bacteria | 2098 |
| 120 | Ga0466958_0005864 | 3300045836 | Bacteria | 6649 |
| 121 | Ga0466958_0028420 | 3300045836 | Bacteria | 3315 |
| 122 | Ga0466958_0058434 | 3300045836 | Bacteria | 2345 |
| 123 | Ga0466967_0006889 | 3300045976 | Bacteria | 8116 |
| 124 | Ga0466967_0239910 | 3300045976 | Bacteria | 1729 |
| 125 | Ga0495629_0138099 | 3300046459 | Bacteria | 1697 |
| 126 | Ga0495641_0023766 | 3300046461 | Bacteria | 3037 |
| 127 | Ga0495651_0002527 | 3300046462 | Bacteria | 14161 |
| 128 | Ga0495608_0066955 | 3300046511 | Bacteria | 2350 |
| 129 | Ga0495640_0090411 | 3300046533 | Bacteria | 2021 |
| 130 | Ga0495667_0010242 | 3300046559 | Bacteria | 6342 |
| 131 | Ga0495635_0012955 | 3300046663 | Bacteria | 5837 |
| 132 | Ga0495680_0006184 | 3300047322 | Bacteria | 11163 |
| 133 | Ga0495602_0028078 | 3300048088 | Bacteria | 5393 |
| 134 | Ga0496100_0004502 | 3300048903 | Bacteria | 7395 |
| 135 | Ga0496100_0028545 | 3300048903 | Bacteria | 3442 |
| 136 | Ga0496101_0011532 | 3300048904 | Bacteria | 5868 |
| 137 | Ga0496101_0049887 | 3300048904 | Bacteria | 3011 |
| 138 | Ga0496102_0031007 | 3300048905 | Bacteria | 4790 |
| 139 | Ga0496103_0000597 | 3300048906 | Bacteria | 28398 |
| 140 | Ga0496105_0022369 | 3300048908 | Bacteria | 5120 |
| 141 | Ga0496105_0110318 | 3300048908 | Bacteria | 2271 |
| 142 | Ga0496106_0010500 | 3300048909 | Bacteria | 6840 |
| 143 | Ga0496107_0002261 | 3300048910 | Bacteria | 12425 |
| 144 | Ga0496108_0146898 | 3300048911 | Bacteria | 2033 |
| 145 | Ga0496109_0002313 | 3300048912 | Bacteria | 15869 |
| 146 | Ga0496109_0017873 | 3300048912 | Bacteria | 6222 |
| 147 | Ga0496109_0111136 | 3300048912 | Bacteria | 2548 |
| 148 | Ga0496111_0008460 | 3300048914 | Bacteria | 6813 |
| 149 | Ga0496112_0001303 | 3300048915 | Bacteria | 18939 |
| 150 | Ga0496112_0003829 | 3300048915 | Bacteria | 12566 |
| 151 | Ga0496113_0011782 | 3300048916 | Bacteria | 5856 |
| 152 | Ga0496113_0123771 | 3300048916 | Bacteria | 2024 |
| 153 | Ga0496114_0001545 | 3300048917 | Bacteria | 17456 |
| 154 | Ga0501031_0028865 | 3300049568 | Bacteria | 3616 |
| 155 | Ga0501031_0118455 | 3300049568 | Bacteria | 1730 |
| 156 | Ga0501036_0069571 | 3300049572 | Bacteria | 2977 |
| 157 | Ga0501036_0532419 | 3300049572 | Bacteria | 977 |
| 158 | Ga0501038_0231974 | 3300049574 | Bacteria | 1469 |
| 159 | Ga0501039_0279864 | 3300049575 | Bacteria | 1311 |
| 160 | Ga0501040_0006763 | 3300049576 | Bacteria | 7439 |
| 161 | Ga0501040_0066107 | 3300049576 | Bacteria | 2491 |
| 162 | Ga0501040_0180839 | 3300049576 | Bacteria | 1495 |
| 163 | Ga0501041_0084012 | 3300049577 | Bacteria | 1962 |
| 164 | Ga0501041_0096731 | 3300049577 | Bacteria | 1825 |
| 165 | Ga0501067_0089061 | 3300049583 | Bacteria | 1713 |
| 166 | Ga0501070_0224747 | 3300049586 | Bacteria | 1539 |
| 167 | Ga0501071_0020439 | 3300049587 | Bacteria | 4601 |
| 168 | Ga0501071_0054818 | 3300049587 | Bacteria | 2877 |
| 169 | Ga0501072_0008420 | 3300049588 | Bacteria | 7827 |
| 170 | Ga0501072_0043651 | 3300049588 | Bacteria | 3524 |
| 171 | Ga0501072_0138643 | 3300049588 | Bacteria | 1939 |
| 172 | Ga0501074_0058744 | 3300049590 | Bacteria | 2771 |
| 173 | Ga0501075_0036194 | 3300049591 | Bacteria | 3684 |
| 174 | Ga0501075_0068962 | 3300049591 | Bacteria | 2672 |
| 175 | Ga0501076_0019590 | 3300049592 | Bacteria | 5173 |
| 176 | Ga0501076_0037730 | 3300049592 | Bacteria | 3791 |
| 177 | Ga0501076_0038766 | 3300049592 | Bacteria | 3741 |
| 178 | Ga0501076_0052949 | 3300049592 | Bacteria | 3216 |
| 179 | Ga0501077_0035071 | 3300049593 | Bacteria | 3194 |
| 180 | Ga0501079_0016300 | 3300049741 | Bacteria | 5679 |
| 181 | Ga0501079_0020895 | 3300049741 | Bacteria | 5006 |
| 182 | Ga0501080_0194946 | 3300049742 | Bacteria | 1861 |
| 183 | Ga0501081_0029568 | 3300049743 | Bacteria | 3703 |
| 184 | Ga0501083_0180899 | 3300049744 | Bacteria | 1377 |
| 185 | Ga0501035_0318443 | 3300049822 | Bacteria | 1307 |
| 186 | Ga0501045_0007040 | 3300049824 | Bacteria | 7796 |
| 187 | Ga0501045_0066409 | 3300049824 | Bacteria | 2649 |
| 188 | nmdc:mga00v17_19923_c1 | 3300050491 | Bacteria | 3836 |
| 189 | nmdc:mga0yw44_46084_c1 | 3300050492 | Bacteria | 2617 |
| 190 | nmdc:mga05p37_159499_c1 | 3300050507 | Bacteria | 2755 |
| 191 | nmdc:mga05p37_398326_c1 | 3300050507 | Bacteria | 1608 |
| 192 | nmdc:mga09592_3659_c1 | 3300050508 | Bacteria | 12395 |
| 193 | nmdc:mga06r32_23076_c1 | 3300050510 | Bacteria | 5756 |
| 194 | nmdc:mga06r32_94187_c1 | 3300050510 | Bacteria | 2930 |
| 195 | nmdc:mga08y16_2515_c1 | 3300050511 | Bacteria | 18836 |
| 196 | nmdc:mga0n895_230544_c1 | 3300050512 | Bacteria | 1880 |
| 197 | nmdc:mga08x19_217818_c1 | 3300050514 | Bacteria | 1311 |
| 198 | Ga0495619_0038003 | 3300053085 | Bacteria | 3139 |
| 199 | Ga0501084_0034572 | 3300054114 | Bacteria | 4226 |
| 200 | Ga0501084_0053682 | 3300054114 | Bacteria | 3371 |
| 201 | Ga0501084_0197522 | 3300054114 | Bacteria | 1697 |
| 202 | Ga0501084_0390544 | 3300054114 | Bacteria | 1176 |
| 203 | Ga0501082_0071133 | 3300060353 | Bacteria | 2996 |
| 204 | Ga0501082_0120611 | 3300060353 | Bacteria | 2273 |
| 205 | Ga0466962_0015925 | 3300061719 | Bacteria | 3629 |
| 206 | Ga0530510_0006159 | 3300061734 | Bacteria | 8334 |
| 207 | Ga0530510_0028756 | 3300061734 | Bacteria | 3985 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300049572 | Ga0501036_0532419 | Ga0501036_0532419_12_818 | 267 |
| 2 | 3300044683 | Ga0466965_0176781 | Ga0466965_0176781_12_848 | 276 |
| 3 | 3300037853 | Ga0436364_1220154 | Ga0436364_1220154_582_1562 | 283 |
| 4 | 3300048904 | Ga0496101_0049887 | Ga0496101_0049887_44_910 | 286 |
| 5 | 3300048905 | Ga0496102_0031007 | Ga0496102_0031007_35_901 | 286 |
| 6 | 3300039437 | Ga0436365_1006497 | Ga0436365_1006497_20_916 | 293 |
| 7 | 3300049572 | Ga0501036_0069571 | Ga0501036_0069571_1645_2541 | 297 |
| 8 | 3300044719 | Ga0466971_0006134 | Ga0466971_0006134_4289_5200 | 301 |
| 9 | 3300044693 | Ga0466961_0002042 | Ga0466961_0002042_145_1146 | 302 |
| 10 | 3300048912 | Ga0496109_0002313 | Ga0496109_0002313_4681_5613 | 303 |
| 11 | 3300044693 | Ga0466961_0042069 | Ga0466961_0042069_797_1711 | 304 |
| 12 | 3300044694 | Ga0466963_0105426 | Ga0466963_0105426_730_1644 | 304 |
| 13 | 3300044735 | Ga0466968_0062419 | Ga0466968_0062419_155_1069 | 304 |
| 14 | 3300044842 | Ga0466957_0066855 | Ga0466957_0066855_715_1629 | 304 |
| 15 | 3300045049 | Ga0466959_0001382 | Ga0466959_0001382_5610_6524 | 304 |
| 16 | 3300045836 | Ga0466958_0028420 | Ga0466958_0028420_1881_2795 | 304 |
| 17 | 3300050507 | nmdc:mga05p37_398326_c1 | nmdc:mga05p37_398326_c1_34_954 | 304 |
| 18 | 3300061719 | Ga0466962_0015925 | Ga0466962_0015925_584_1498 | 304 |
| 19 | 3300039437 | Ga0436365_0517533 | Ga0436365_0517533_2442_3422 | 313 |
| 20 | 3300044694 | Ga0466963_0002063 | Ga0466963_0002063_4008_4955 | 313 |
| 21 | 3300045836 | Ga0466958_0005864 | Ga0466958_0005864_151_1098 | 313 |
| 22 | 3300045976 | Ga0466967_0006889 | Ga0466967_0006889_5291_6238 | 313 |
| 23 | 3300021388 | Ga0213875_10075567 | Ga0213875_100755672 | 315 |
| 24 | 3300037853 | Ga0436364_0971041 | Ga0436364_0971041_775_1776 | 315 |
| 25 | 3300039437 | Ga0436365_0139334 | Ga0436365_0139334_15468_16466 | 315 |
| 26 | 3300005937 | Ga0081455_10005351 | Ga0081455_100053518 | 316 |
| 27 | 3300005981 | Ga0081538_10003031 | Ga0081538_100030314 | 316 |
| 28 | 3300021384 | Ga0213876_10048120 | Ga0213876_100481202 | 317 |
| 29 | 3300037853 | Ga0436364_1407419 | Ga0436364_1407419_224_1225 | 317 |
| 30 | 3300039437 | Ga0436365_1176627 | Ga0436365_1176627_933_1934 | 317 |
| 31 | 3300039450 | Ga0436363_0655245 | Ga0436363_0655245_125_1126 | 317 |
| 32 | 3300039453 | Ga0436362_0214714 | Ga0436362_0214714_108_1121 | 317 |
| 33 | 3300009098 | Ga0105245_10594831 | Ga0105245_105948311 | 319 |
| 34 | 3300037853 | Ga0436364_0786383 | Ga0436364_0786383_16755_17756 | 319 |
| 35 | 3300005338 | Ga0068868_100093589 | Ga0068868_1000935892 | 320 |
| 36 | 3300005365 | Ga0070688_100000070 | Ga0070688_10000007047 | 320 |
| 37 | 3300005365 | Ga0070688_100117471 | Ga0070688_1001174712 | 320 |
| 38 | 3300005544 | Ga0070686_100026662 | Ga0070686_1000266622 | 320 |
| 39 | 3300005546 | Ga0070696_100044294 | Ga0070696_1000442942 | 320 |
| 40 | 3300005548 | Ga0070665_100109987 | Ga0070665_1001099872 | 320 |
| 41 | 3300005549 | Ga0070704_100006753 | Ga0070704_1000067533 | 320 |
| 42 | 3300005937 | Ga0081455_10079775 | Ga0081455_100797752 | 320 |
| 43 | 3300006038 | Ga0075365_10021270 | Ga0075365_100212703 | 320 |
| 44 | 3300006051 | Ga0075364_10024394 | Ga0075364_100243943 | 320 |
| 45 | 3300006175 | Ga0070712_100001886 | Ga0070712_10000188612 | 320 |
| 46 | 3300006178 | Ga0075367_10195764 | Ga0075367_101957641 | 320 |
| 47 | 3300006844 | Ga0075428_100014427 | Ga0075428_1000144274 | 320 |
| 48 | 3300006847 | Ga0075431_100025555 | Ga0075431_1000255552 | 320 |
| 49 | 3300006847 | Ga0075431_100026823 | Ga0075431_1000268232 | 320 |
| 50 | 3300006847 | Ga0075431_100118077 | Ga0075431_1001180772 | 320 |
| 51 | 3300007076 | Ga0075435_100025699 | Ga0075435_1000256992 | 320 |
| 52 | 3300009098 | Ga0105245_10000476 | Ga0105245_1000047634 | 320 |
| 53 | 3300009147 | Ga0114129_10084395 | Ga0114129_100843954 | 320 |
| 54 | 3300009148 | Ga0105243_10066886 | Ga0105243_100668862 | 320 |
| 55 | 3300009553 | Ga0105249_10196172 | Ga0105249_101961722 | 320 |
| 56 | 3300014326 | Ga0157380_10000576 | Ga0157380_1000057612 | 320 |
| 57 | 3300014969 | Ga0157376_10090886 | Ga0157376_100908862 | 320 |
| 58 | 3300025915 | Ga0207693_10001133 | Ga0207693_1000113312 | 320 |
| 59 | 3300026121 | Ga0207683_10178712 | Ga0207683_101787122 | 320 |
| 60 | 3300028379 | Ga0268266_10057247 | Ga0268266_100572472 | 320 |
| 61 | 3300035695 | Ga0373927_0118182 | Ga0373927_0118182_749_1717 | 320 |
| 62 | 3300037466 | Ga0395898_0006386 | Ga0395898_0006386_6753_7721 | 320 |
| 63 | 3300044901 | Ga0466960_0056868 | Ga0466960_0056868_110_1078 | 320 |
| 64 | 3300046461 | Ga0495641_0023766 | Ga0495641_0023766_70_1038 | 320 |
| 65 | 3300048903 | Ga0496100_0028545 | Ga0496100_0028545_20_988 | 320 |
| 66 | 3300048906 | Ga0496103_0000597 | Ga0496103_0000597_10957_11925 | 320 |
| 67 | 3300048908 | Ga0496105_0022369 | Ga0496105_0022369_2455_3423 | 320 |
| 68 | 3300048909 | Ga0496106_0010500 | Ga0496106_0010500_1251_2219 | 320 |
| 69 | 3300048910 | Ga0496107_0002261 | Ga0496107_0002261_2177_3145 | 320 |
| 70 | 3300048912 | Ga0496109_0111136 | Ga0496109_0111136_855_1823 | 320 |
| 71 | 3300048914 | Ga0496111_0008460 | Ga0496111_0008460_3224_4192 | 320 |
| 72 | 3300048915 | Ga0496112_0001303 | Ga0496112_0001303_12394_13362 | 320 |
| 73 | 3300048917 | Ga0496114_0001545 | Ga0496114_0001545_3840_4808 | 320 |
| 74 | 3300049576 | Ga0501040_0006763 | Ga0501040_0006763_3920_4885 | 320 |
| 75 | 3300049577 | Ga0501041_0096731 | Ga0501041_0096731_621_1589 | 320 |
| 76 | 3300049583 | Ga0501067_0089061 | Ga0501067_0089061_448_1416 | 320 |
| 77 | 3300049586 | Ga0501070_0224747 | Ga0501070_0224747_428_1393 | 320 |
| 78 | 3300049587 | Ga0501071_0054818 | Ga0501071_0054818_314_1282 | 320 |
| 79 | 3300049588 | Ga0501072_0008420 | Ga0501072_0008420_3123_4088 | 320 |
| 80 | 3300049590 | Ga0501074_0058744 | Ga0501074_0058744_391_1356 | 320 |
| 81 | 3300049591 | Ga0501075_0036194 | Ga0501075_0036194_438_1403 | 320 |
| 82 | 3300049592 | Ga0501076_0038766 | Ga0501076_0038766_1032_1997 | 320 |
| 83 | 3300049592 | Ga0501076_0052949 | Ga0501076_0052949_362_1330 | 320 |
| 84 | 3300049741 | Ga0501079_0016300 | Ga0501079_0016300_3751_4716 | 320 |
| 85 | 3300049743 | Ga0501081_0029568 | Ga0501081_0029568_2281_3246 | 320 |
| 86 | 3300049822 | Ga0501035_0318443 | Ga0501035_0318443_294_1259 | 320 |
| 87 | 3300049824 | Ga0501045_0007040 | Ga0501045_0007040_457_1422 | 320 |
| 88 | 3300050491 | nmdc:mga00v17_19923_c1 | nmdc:mga00v17_19923_c1_814_1782 | 320 |
| 89 | 3300050492 | nmdc:mga0yw44_46084_c1 | nmdc:mga0yw44_46084_c1_654_1622 | 320 |
| 90 | 3300050510 | nmdc:mga06r32_23076_c1 | nmdc:mga06r32_23076_c1_3766_4755 | 320 |
| 91 | 3300050510 | nmdc:mga06r32_94187_c1 | nmdc:mga06r32_94187_c1_1331_2299 | 320 |
| 92 | 3300050512 | nmdc:mga0n895_230544_c1 | nmdc:mga0n895_230544_c1_196_1164 | 320 |
| 93 | 3300050514 | nmdc:mga08x19_217818_c1 | nmdc:mga08x19_217818_c1_303_1271 | 320 |
| 94 | 3300054114 | Ga0501084_0034572 | Ga0501084_0034572_2766_3731 | 320 |
| 95 | 3300054114 | Ga0501084_0390544 | Ga0501084_0390544_20_988 | 320 |
| 96 | 3300060353 | Ga0501082_0071133 | Ga0501082_0071133_1558_2523 | 320 |
| 97 | 3300060353 | Ga0501082_0120611 | Ga0501082_0120611_819_1787 | 320 |
| 98 | 3300061734 | Ga0530510_0006159 | Ga0530510_0006159_2490_3455 | 320 |
| 99 | 3300026075 | Ga0207708_10132464 | Ga0207708_101324642 | 321 |
| 100 | 3300037853 | Ga0436364_0847212 | Ga0436364_0847212_1717_2697 | 324 |
| 101 | 3300037853 | Ga0436364_1195511 | Ga0436364_1195511_1335_2315 | 324 |
| 102 | 3300045049 | Ga0466959_0027354 | Ga0466959_0027354_2624_3616 | 324 |
| 103 | 3300035118 | Ga0373954_0119166 | Ga0373954_0119166_25_1008 | 325 |
| 104 | 3300035724 | Ga0373933_0020750 | Ga0373933_0020750_736_1719 | 325 |
| 105 | 3300036401 | Ga0373937_0042122 | Ga0373937_0042122_1054_2037 | 325 |
| 106 | 3300046459 | Ga0495629_0138099 | Ga0495629_0138099_565_1548 | 325 |
| 107 | 3300046462 | Ga0495651_0002527 | Ga0495651_0002527_7954_8937 | 325 |
| 108 | 3300046511 | Ga0495608_0066955 | Ga0495608_0066955_1129_2112 | 325 |
| 109 | 3300046533 | Ga0495640_0090411 | Ga0495640_0090411_23_1006 | 325 |
| 110 | 3300046559 | Ga0495667_0010242 | Ga0495667_0010242_4502_5485 | 325 |
| 111 | 3300046663 | Ga0495635_0012955 | Ga0495635_0012955_4826_5809 | 325 |
| 112 | 3300047322 | Ga0495680_0006184 | Ga0495680_0006184_8417_9400 | 325 |
| 113 | 3300048088 | Ga0495602_0028078 | Ga0495602_0028078_29_1012 | 325 |
| 114 | 3300048908 | Ga0496105_0110318 | Ga0496105_0110318_718_1701 | 325 |
| 115 | 3300048916 | Ga0496113_0011782 | Ga0496113_0011782_3873_4856 | 325 |
| 116 | 3300053085 | Ga0495619_0038003 | Ga0495619_0038003_2106_3089 | 325 |
| 117 | 3300009147 | Ga0114129_10356043 | Ga0114129_103560432 | 327 |
| 118 | 3300025929 | Ga0207664_10391277 | Ga0207664_103912772 | 327 |
| 119 | 3300026118 | Ga0207675_100337810 | Ga0207675_1003378102 | 327 |
| 120 | 3300044765 | Ga0466970_0133567 | Ga0466970_0133567_286_1278 | 327 |
| 121 | 3300045976 | Ga0466967_0239910 | Ga0466967_0239910_699_1691 | 327 |
| 122 | 3300048915 | Ga0496112_0003829 | Ga0496112_0003829_8064_9059 | 327 |
| 123 | 3300050507 | nmdc:mga05p37_159499_c1 | nmdc:mga05p37_159499_c1_1063_2055 | 327 |
| 124 | 3300005329 | Ga0070683_100025292 | Ga0070683_1000252923 | 328 |
| 125 | 3300005353 | Ga0070669_100058735 | Ga0070669_1000587352 | 328 |
| 126 | 3300005366 | Ga0070659_100000002 | Ga0070659_100000002138 | 328 |
| 127 | 3300005435 | Ga0070714_100016139 | Ga0070714_1000161393 | 328 |
| 128 | 3300005435 | Ga0070714_100066026 | Ga0070714_1000660262 | 328 |
| 129 | 3300005435 | Ga0070714_100094302 | Ga0070714_1000943022 | 328 |
| 130 | 3300005437 | Ga0070710_10000007 | Ga0070710_1000000799 | 328 |
| 131 | 3300005437 | Ga0070710_10003066 | Ga0070710_100030664 | 328 |
| 132 | 3300005439 | Ga0070711_100020302 | Ga0070711_1000203023 | 328 |
| 133 | 3300005616 | Ga0068852_100260518 | Ga0068852_1002605181 | 328 |
| 134 | 3300006028 | Ga0070717_10000024 | Ga0070717_1000002437 | 328 |
| 135 | 3300006028 | Ga0070717_10049215 | Ga0070717_100492152 | 328 |
| 136 | 3300006175 | Ga0070712_100000072 | Ga0070712_10000007215 | 328 |
| 137 | 3300006175 | Ga0070712_100013421 | Ga0070712_1000134214 | 328 |
| 138 | 3300021358 | Ga0213873_10004648 | Ga0213873_100046482 | 328 |
| 139 | 3300021377 | Ga0213874_10003831 | Ga0213874_100038312 | 328 |
| 140 | 3300021384 | Ga0213876_10005925 | Ga0213876_100059254 | 328 |
| 141 | 3300021384 | Ga0213876_10007770 | Ga0213876_100077703 | 328 |
| 142 | 3300021388 | Ga0213875_10009175 | Ga0213875_100091752 | 328 |
| 143 | 3300021388 | Ga0213875_10044719 | Ga0213875_100447192 | 328 |
| 144 | 3300025898 | Ga0207692_10000001 | Ga0207692_10000001329 | 328 |
| 145 | 3300025915 | Ga0207693_10000001 | Ga0207693_10000001159 | 328 |
| 146 | 3300025915 | Ga0207693_10003371 | Ga0207693_100033717 | 328 |
| 147 | 3300025923 | Ga0207681_10034521 | Ga0207681_100345212 | 328 |
| 148 | 3300025927 | Ga0207687_10029707 | Ga0207687_100297072 | 328 |
| 149 | 3300025928 | Ga0207700_10189303 | Ga0207700_101893032 | 328 |
| 150 | 3300025929 | Ga0207664_10012512 | Ga0207664_100125124 | 328 |
| 151 | 3300025932 | Ga0207690_10000024 | Ga0207690_1000002475 | 328 |
| 152 | 3300025944 | Ga0207661_10029463 | Ga0207661_100294632 | 328 |
| 153 | 3300026142 | Ga0207698_10303499 | Ga0207698_103034992 | 328 |
| 154 | 3300028573 | Ga0265334_10000512 | Ga0265334_100005124 | 328 |
| 155 | 3300028666 | Ga0265336_10003233 | Ga0265336_100032336 | 328 |
| 156 | 3300028800 | Ga0265338_10004903 | Ga0265338_1000490315 | 328 |
| 157 | 3300029957 | Ga0265324_10005384 | Ga0265324_100053842 | 328 |
| 158 | 3300031824 | Ga0307413_10206259 | Ga0307413_102062591 | 328 |
| 159 | 3300037853 | Ga0436364_0484761 | Ga0436364_0484761_1704_2705 | 328 |
| 160 | 3300039437 | Ga0436365_0577470 | Ga0436365_0577470_2399_3400 | 328 |
| 161 | 3300039437 | Ga0436365_1481590 | Ga0436365_1481590_688_1689 | 328 |
| 162 | 3300039450 | Ga0436363_1045753 | Ga0436363_1045753_16762_17763 | 328 |
| 163 | 3300039453 | Ga0436362_0298490 | Ga0436362_0298490_2149_3150 | 328 |
| 164 | 3300044719 | Ga0466971_0072466 | Ga0466971_0072466_11_1018 | 328 |
| 165 | 3300045049 | Ga0466959_0065733 | Ga0466959_0065733_1474_2475 | 328 |
| 166 | 3300045049 | Ga0466959_0098227 | Ga0466959_0098227_266_1267 | 328 |
| 167 | 3300045836 | Ga0466958_0058434 | Ga0466958_0058434_1309_2316 | 328 |
| 168 | 3300048903 | Ga0496100_0004502 | Ga0496100_0004502_2588_3592 | 328 |
| 169 | 3300048904 | Ga0496101_0011532 | Ga0496101_0011532_4399_5403 | 328 |
| 170 | 3300048911 | Ga0496108_0146898 | Ga0496108_0146898_91_1095 | 328 |
| 171 | 3300048912 | Ga0496109_0017873 | Ga0496109_0017873_179_1183 | 328 |
| 172 | 3300048916 | Ga0496113_0123771 | Ga0496113_0123771_92_1120 | 328 |
| 173 | 3300050508 | nmdc:mga09592_3659_c1 | nmdc:mga09592_3659_c1_11050_12072 | 328 |
| 174 | 3300003203 | JGI25406J46586_10002913 | JGI25406J46586_100029133 | 329 |
| 175 | 3300005981 | Ga0081538_10073423 | Ga0081538_100734232 | 329 |
| 176 | 3300005985 | Ga0081539_10005320 | Ga0081539_1000532013 | 329 |
| 177 | 3300009094 | Ga0111539_10054422 | Ga0111539_100544222 | 329 |
| 178 | 3300009177 | Ga0105248_10561118 | Ga0105248_105611182 | 329 |
| 179 | 3300027907 | Ga0207428_10008773 | Ga0207428_100087732 | 329 |
| 180 | 3300031824 | Ga0307413_10025151 | Ga0307413_100251512 | 329 |
| 181 | 3300031903 | Ga0307407_10214708 | Ga0307407_102147081 | 329 |
| 182 | 3300031995 | Ga0307409_100023359 | Ga0307409_1000233593 | 329 |
| 183 | 3300032002 | Ga0307416_100026261 | Ga0307416_1000262612 | 329 |
| 184 | 3300032004 | Ga0307414_10068312 | Ga0307414_100683122 | 329 |
| 185 | 3300032126 | Ga0307415_100011777 | Ga0307415_1000117772 | 329 |
| 186 | 3300049568 | Ga0501031_0028865 | Ga0501031_0028865_193_1182 | 329 |
| 187 | 3300049568 | Ga0501031_0118455 | Ga0501031_0118455_543_1532 | 329 |
| 188 | 3300049574 | Ga0501038_0231974 | Ga0501038_0231974_338_1327 | 329 |
| 189 | 3300049575 | Ga0501039_0279864 | Ga0501039_0279864_123_1112 | 329 |
| 190 | 3300049576 | Ga0501040_0066107 | Ga0501040_0066107_741_1730 | 329 |
| 191 | 3300049576 | Ga0501040_0180839 | Ga0501040_0180839_89_1078 | 329 |
| 192 | 3300049577 | Ga0501041_0084012 | Ga0501041_0084012_165_1154 | 329 |
| 193 | 3300049587 | Ga0501071_0020439 | Ga0501071_0020439_1157_2146 | 329 |
| 194 | 3300049588 | Ga0501072_0043651 | Ga0501072_0043651_1032_2021 | 329 |
| 195 | 3300049588 | Ga0501072_0138643 | Ga0501072_0138643_134_1123 | 329 |
| 196 | 3300049591 | Ga0501075_0068962 | Ga0501075_0068962_1443_2432 | 329 |
| 197 | 3300049592 | Ga0501076_0019590 | Ga0501076_0019590_2431_3420 | 329 |
| 198 | 3300049592 | Ga0501076_0037730 | Ga0501076_0037730_1950_2939 | 329 |
| 199 | 3300049593 | Ga0501077_0035071 | Ga0501077_0035071_1795_2784 | 329 |
| 200 | 3300049741 | Ga0501079_0020895 | Ga0501079_0020895_1771_2760 | 329 |
| 201 | 3300049742 | Ga0501080_0194946 | Ga0501080_0194946_139_1128 | 329 |
| 202 | 3300049744 | Ga0501083_0180899 | Ga0501083_0180899_321_1310 | 329 |
| 203 | 3300049824 | Ga0501045_0066409 | Ga0501045_0066409_205_1194 | 329 |
| 204 | 3300050511 | nmdc:mga08y16_2515_c1 | nmdc:mga08y16_2515_c1_7648_8637 | 329 |
| 205 | 3300054114 | Ga0501084_0053682 | Ga0501084_0053682_76_1065 | 329 |
| 206 | 3300054114 | Ga0501084_0197522 | Ga0501084_0197522_478_1467 | 329 |
| 207 | 3300061734 | Ga0530510_0028756 | Ga0530510_0028756_2237_3226 | 329 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3i12-assembly1.cif.gz_A | the crystal structure of the d-alanyl-alanine synthetase a from salmonella enterica subsp. enterica serovar typhimurium str. lt2 | 0.9334 | 1 | 329 |
| 3i12-assembly1.cif.gz_A | the crystal structure of the d-alanyl-alanine synthetase a from salmonella enterica subsp. enterica serovar typhimurium str. lt2 | 0.9307 | 1 | 329 |
| 3q1k-assembly1.cif.gz_A | the crystal structure of the d-alanyl-alanine synthetase a from salmonella enterica typhimurium complexed with adp | 0.9288 | 1 | 329 |
| 4zqi-assembly2.cif.gz_C | crystal structure of apo d-alanine-d-alanine ligase(ddl) from yersinia pestis | 0.928 | 2 | 315 |
| 3q1k-assembly1.cif.gz_A | the crystal structure of the d-alanyl-alanine synthetase a from salmonella enterica typhimurium complexed with adp | 0.9261 | 1 | 329 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3q1kB02 | Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain | 0.9465 | 94 | 329 | 3.30.470.20 |
| 3q1kB02 | Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain | 0.9402 | 94 | 329 | 3.30.470.20 |
| 3k3pB02 | Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain | 0.9388 | 94 | 325 | 3.30.470.20 |
| 3k3pB02 | Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain | 0.9325 | 94 | 325 | 3.30.470.20 |
| af_P9WP31_235_360_3.30.470.20 | Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain | 0.9311 | 193 | 310 | 3.30.470.20 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A357CRR7-F1-model_v4 | D-alanine--D-alanine ligase A | 0.9729 | 65 | 324 |
GO:0005524
GO:0005829 GO:0008360 GO:0008716 GO:0009252 GO:0046872 GO:0071555 |
| AF-A0A535FBX8-F1-model_v4 | D-alanine--D-alanine ligase | 0.9685 | 80 | 329 |
GO:0005524
GO:0005829 GO:0008360 GO:0008716 GO:0009252 GO:0046872 GO:0071555 |
| AF-A0A1Q7UBS9-F1-model_v4 | ATP-grasp domain-containing protein | 0.9685 | 145 | 329 |
GO:0005524
GO:0005829 GO:0008716 GO:0009252 GO:0046872 |
| AF-A0A7X6VCQ7-F1-model_v4 | ATP-grasp domain-containing protein | 0.9677 | 163 | 323 |
GO:0005524
GO:0005829 GO:0008360 GO:0008716 GO:0009252 GO:0046872 |
| AF-A0A378DKL8-F1-model_v4 | deleted | 0.965 | 178 | 329 |
|
Predicted Structure (AlphaFold2)
Powered by PDBe Molstar